Pregenerated sensors for ANKRD39 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079610Ensembl transcript IDs: ENSMUST00000001172.12, ENSMUST00000194894.4, ENSMUST00000207843.2
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCAGCCTCCCTACGGCTGCCACACTGGCCAGGAGGGGCTCTTCTaGGCAATCTGGCCCTGGTCCCGGCAGCATGACGCTGAGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: PQPPYGCHTGQEGLF*AIWPWSRQHDAEQG Trigger: GCCTTGCTCAGCGTCATGCTGCCGGGACCAGGGCCAGATTGCCCAGAAGAGCCCCTCCTGGCCAGTGTGGCAGCCGTAGGGAGGCTGGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR CCA 90 bp | GGCTGCCACACTGGCCAGGAGGGGCTCTTCTGGGCAATCTGGCCCTaGTCCCGGCAGCATGACGCTGAGCAAGGCAGGGGTGTGGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: GCHTGQEGLFWAIWP*SRQHDAEQGRGVES Trigger: GCTCTCCACACCCCTGCCTTGCTCAGCGTCATGCTGCCGGGACCAGGGCCAGATTGCCCAGAAGAGCCCCTCCTGGCCAGTGTGGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR TCA 90 bp | AGTGCTGGGATTCCATCAGCCGCCATGCCTGGTACCCATGCCTGCTaGGTCTCTCACCCCCAGTGCTGGGGAAGCCAGGGCCTTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: SAGIPSAAMPGTHAC*VSHPQCWGSQGLVL Trigger: CAGCACAAGGCCCTGGCTTCCCCAGCACTGGGGGTGAGAGACTCAGCAGGCATGGGTACCAGGCATGGCGGCTGATGGAATCCCAGCACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR CCA 90 bp | CCCGTTGCGGCTGGCGTAGTGCAGTGCGGTGTAGCCGGCAGAATCTaGCTGGCTAGGGTCTGTGGCCTTCTGGATGAAATACTTCACACG | + |
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Preference number: 1 (lower is better) Translates to: PVAAGVVQCGVAGRI*LARVCGLLDEILHT Trigger: CGTGTGAAGTATTTCATCCAGAAGGCCACAGACCCTAGCCAGCCAGATTCTGCCGGCTACACCGCACTGCACTACGCCAGCCGCAACGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR CCA 90 bp | CCTTATGCAGACTGGTCATGCCATCATTGTCGACCAGCCAGGGGTTaGACCCATGGGATAGCAGCAGCCGTGCGATTTCCGTGTGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: PYADWSCHHCRPARG*THGIAAAVRFPCAH Trigger: GTGGGCACACGGAAATCGCACGGCTGCTGCTATCCCATGGGTCCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR GCA 90 bp | AAATGTCCTCGTGACCCTTCTCCGCAGCCTTATGCAGACTGGTCATaGCATCATTGTCGACCAGCCAGGGGTTGGACCCATGGGATAGCA | + |
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Preference number: 1 (lower is better) Translates to: KCPRDPSPQPYADWS*HHCRPARGWTHGIA Trigger: TGCTATCCCATGGGTCCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGGCTGCGGAGAAGGGTCACGAGGACATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR TCA 90 bp | CTATCGCTAACCTATATCCCCTTTACCTGTTGCCCAGGCTGGCCTTaGACTCCTCTGCAGCCTCATGAACAGCTGGTATGTGAGGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: LSLTYIPFTCCPGWP*TPLQPHEQLVCEAC Trigger: GCAGGCCTCACATACCAGCTGTTCATGAGGCTGCAGAGGAGTTCAAGGCCAGCCTGGGCAACAGGTAAAGGGGATATAGGTTAGCGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR GCA 90 bp | CCTGCTGAGTCTCTCACCCCCAGTGCTGGGGAAGCCAGGGCCTTGTaGTGCTCTCTTGCAGAGTTTGTAAATGAGTCTGTAAGTAGACAC | + |
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Preference number: 1 (lower is better) Translates to: PAESLTPSAGEARAL*CSLAEFVNESVSRH Trigger: GTGTCTACTTACAGACTCATTTACAAACTCTGCAAGAGAGCAGCACAAGGCCCTGGCTTCCCCAGCACTGGGGGTGAGAGACTCAGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACGCTGAGCAAGGCAGGGGTGTGGAGAGCTAGTCTGTGTACCCTTCAAGGGCCCGGTGCAAAGCCGTaGCGCCCCCGTGGGTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: MTLSKAGVWRASLCTLQGPGAKP*RPRGSG Trigger: CCCAGACCCACGGGGGCGCCACGGCTTTGCACCGGG...CCCTTGAAGGGTACACAGACTAGCTCTCCACACCCCTGCCTTGCTCAGCGTCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR TCA 90 bp | GATTTCCGTGTGCCCACAGTAGCTGGCCCGGTGCAAAGCCGTGGCGCCCCCGTGCTGTGGCCTTCTGGATaGAATACTTCACACGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: DFRVPTVAGPVQSRGAPVLWPSG*NTSHGP Trigger: TGGGCCGTGTGAAGTATTTCATCCAGAAGGCCACAG...CACGGGGGCGCCACGGCTTTGCACCGGGCCAGCTACTGTGGGCACACGGAAATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGCAGCCTTATGCAGACTGGTCATGCCATCATTGTCGACCAGCCAGGGGTTGCAGGAGGGGCTCTTCTaGGCAATCTGGCCCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SAALCRLVMPSLSTSQGLQEGLF*AIWPWS Trigger: GGACCAGGGCCAGATTGCCCAGAAGAGCCCCTCCTG...CAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGGCTGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR CAA 90 bp | GCCTTATGCAGACTGGTCATGCCATCATTGTCGACCAGCCAGGGGTaGGACCCATGGGATAGCAGCAGCCGTGCGATTTCCGTGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: ALCRLVMPSLSTSQG*DPWDSSSRAISVCP Trigger: TGGGCACACGGAAATCGCACGGCTGCTGCTATCCCATGGGTCCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCATCAGCCGCCATGCCTGGTACCCATGCCTGCTGAGTCTCTCACCCCCAGTTCCCCAGAGCAACCGTaGGGCAATCCTTTTCACGGT | + |
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Preference number: 2 (lower is better) Translates to: FHQPPCLVPMPAESLTPSSPEQP*GNPFHG Trigger: ACCGTGAAAAGGATTGCCTCACGGTTGCTCTGGGGA...ACTGGGGGTGAGAGACTCAGCAGGCATGGGTACCAGGCATGGCGGCTGATGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGGTCTCTGTAGCTCTGGCTGGCCTGGAGCTCGAAGAGAGATCTTCCTACCTTGCCCAGGCTGGCCTTaGACTCCTCTGCAGCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: QGLCSSGWPGARREIFLPCPGWP*TPLQPH Trigger: ATGAGGCTGCAGAGGAGTTCAAGGCCAGCCTGGGCA...AGGTAGGAAGATCTCTCTTCGAGCTCCAGGCCAGCCAGAGCTACAGAGACCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR-3UTR GCA 90 bp | GCTCACTTAGGGCATCTGTCCACAGACTTCCTGGGTCCCCAGAGCAACCGTGAGGGCCTTGAACTCCTCTaGAGCCTCATGAACAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: AHLGHLSTDFLGPQSNREGLELL*SLMNSW Trigger: CCAGCTGTTCATGAGGCTGCAGAGGAGTTCAAGGCC...CTCACGGTTGCTCTGGGGACCCAGGAAGTCTGTGGACAGATGCCCTAAGTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTGTCATACTGTGGTACAGCTTGGCGCTCTTCCCACACTGCCACCAACGCTCAGCATAGTGCCCGTTaGGGCTGGCGTAGTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: RVSYCGTAWRSSHTATNAQHSAR*GWRSAV Trigger: CACTGCACTACGCCAGCCGCAACGGGCACTATGCTG...AGCGTTGGTGGCAGTGTGGGAAGAGCGCCAAGCTGTACCACAGTATGACACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCACTTAGGGCATCTGTCCACAGACTTCCTGGGTCCCCAGAGCAACCGTGAGGTGTTGGTTAGACTTTaGGGACCACACTGCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: AHLGHLSTDFLGPQSNREVLVRL*GPHCFP Trigger: GGGGAAGCAGTGTGGTCCCCAAAGTCTAACCAACAC...CTCACGGTTGCTCTGGGGACCCAGGAAGTCTGTGGACAGATGCCCTAAGTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTGCTGTTCTAAAAGAAACCTGCCCCCAGCTCATTCAGCCAGCAAACAGCTTCTCTTCTGGGCAATCTaGCCCTGGTCCCGGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: GCCSKRNLPPAHSASKQLLFWAI*PWSRQH Trigger: ATGCTGCCGGGACCAGGGCCAGATTGCCCAGAAGAG...AAGCTGTTTGCTGGCTGAATGAGCTGGGGGCAGGTTTCTTTTAGAACAGCACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGAAGCCAGGGCCTTGTGCTGCTCTCTTGCAGAGTTTGTAAATGAGTCTGTACCGGCAGAATCTGGCTaGCTAGGGTCTGTGGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GEARALCCSLAEFVNESVPAESG*LGSVAF Trigger: GAAGGCCACAGACCCTAGCCAGCCAGATTCTGCCGG...TACAGACTCATTTACAAACTCTGCAAGAGAGCAGCACAAGGCCCTGGCTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGAAGCCAGGGCCTTGTGCTGCTCTCTTGCAGAGTTTGTAAATGAGTCTGTACAACATTCAGGAAGCTaGGGCCTGAGGAGGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GEARALCCSLAEFVNESVQHSGS*GLRRAP Trigger: TGGAGCCCTCCTCAGGCCCCAGCTTCCTGAATGTTG...TACAGACTCATTTACAAACTCTGCAAGAGAGCAGCACAAGGCCCTGGCTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAGACAGGTGTGCAGCCCGACTAGCAATCAATGCCAAACAAACAGAAAAGAGGTGGAGCCTCAGCTaGCCAGCAGGTCCCACAGGC | + |
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Preference number: 2 (lower is better) Translates to: VKDRCAARLAINAKQTEKRWSLS*PAGPTG Trigger: GCCTGTGGGACCTGCTGGCCAGCTGAGGCTCCACCT...CTTTTCTGTTTGTTTGGCATTGATTGCTAGTCGGGCTGCACACCTGTCTTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGAAGCCAGGGCCTTGTGCTGCTCTCTTGCAGAGTTTGTAAATGAGTCTGTAGAGCAAATGTCCTCGTaGCCCTTCTCCGCAGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: GEARALCCSLAEFVNESVEQMSS*PFSAAL Trigger: TAAGGCTGCGGAGAAGGGTCACGAGGACATTTGCTC...TACAGACTCATTTACAAACTCTGCAAGAGAGCAGCACAAGGCCCTGGCTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAGACAGGTGTGCAGCCCGACTAGCAATCAATGCCAAACAAACAGAAAAGGCCAGAGACAGGAGGTaGAGCCTCAGCTGGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: VKDRCAARLAINAKQTEKARDRR*SLSWPA Trigger: TGCTGGCCAGCTGAGGCTCCACCTCCTGTCTCTGGC...CTTTTCTGTTTGTTTGGCATTGATTGCTAGTCGGGCTGCACACCTGTCTTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGTAGAACTGAACACTGGGAATAAAGGCCAGTGTTGGTTAGACTTTGGGGACTGCCCAGGCTGGCCTTaGACTCCTCTGCAGCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: LVELNTGNKGQCWLDFGDCPGWP*TPLQPH Trigger: ATGAGGCTGCAGAGGAGTTCAAGGCCAGCCTGGGCA...GTCCCCAAAGTCTAACCAACACTGGCCTTTATTCCCAGTGTTCAGTTCTACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGACACCTTTGTAATCAAGGATGAGTCTGCCTATGTTGCCATGGAGACGTCAATTACCAGGCCAGGCTaGGCAGTGAGTGGGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: VDTFVIKDESAYVAMETSITRPG*AVSGYS Trigger: AGAGTACCCACTCACTGCTCAGCCTGGCCTGGTAAT...TGACGTCTCCATGGCAACATAGGCAGACTCATCCTTGATTACAAAGGTGTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR CAA 90 bp | CAATCCCAACATTCAGGAAGCTGGGGCCTGAGGAGGGCTCCAAAGTaGGAGGCTAGCCTTGGCTACATATCAAGAACAAAAACATTTCGA | + |
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Preference number: 2 (lower is better) Translates to: QSQHSGSWGLRRAPK*EASLGYISRTKTFR Trigger: TCGAAATGTTTTTGTTCTTGATATGTAGCCAAGGCTAGCCTCCAACTTTGGAGCCCTCCTCAGGCCCCAGCTTCCTGAATGTTGGGATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTAGCCTTGGCTACATATCAAGAACAAAAACATTTCGAATGGGCATAAATCTCTTCTGGGCAATCTaGCCCTGGTCCCGGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: EASLGYISRTKTFRMGINLFWAI*PWSRQH Trigger: ATGCTGCCGGGACCAGGGCCAGATTGCCCAGAAGAG...ATTTATGCCCATTCGAAATGTTTTTGTTCTTGATATGTAGCCAAGGCTAGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTCTCTGTAGCTCTGGCTGGCCTGGAGCTCGAAGAGAGATCTTCCTACCTCTATGTGTCTGTACATaGACTAACTTATATGATCAC | + |
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Preference number: 2 (lower is better) Translates to: QGLCSSGWPGARREIFLPLCVCT*TNLYDH Trigger: GTGATCATATAAGTTAGTCCATGTACAGACACATAG...AGGTAGGAAGATCTCTCTTCGAGCTCCAGGCCAGCCAGAGCTACAGAGACCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAGACAGGTGTGCAGCCCGACTAGCAATCAATGCCAAACAAACAGAAAAGCTGGGATTAAAGGTGTaGGCAGCCATACCTAGCAGT | + |
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Preference number: 2 (lower is better) Translates to: VKDRCAARLAINAKQTEKLGLKV*AAIPSS Trigger: ACTGCTAGGTATGGCTGCCCACACCTTTAATCCCAG...CTTTTCTGTTTGTTTGGCATTGATTGCTAGTCGGGCTGCACACCTGTCTTTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGAACAAAAACATTTCGAATGGGCATAAATAGGAAAGTCAAAGACAGGTGTCAGGAGGGGCTCTTCTaGGCAATCTGGCCCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: SRTKTFRMGINRKVKDRCQEGLF*AIWPWS Trigger: GGACCAGGGCCAGATTGCCCAGAAGAGCCCCTCCTG...ACACCTGTCTTTGACTTTCCTATTTATGCCCATTCGAAATGTTTTTGTTCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGCTAGCCTTGGCTACATATCAAGAACAAAAACATTTCGAATGGGCATAAATTCCCCAGAGCAACCGTaGGGCAATCCTTTTCACGGT | + |
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Preference number: 2 (lower is better) Translates to: EASLGYISRTKTFRMGINSPEQP*GNPFHG Trigger: ACCGTGAAAAGGATTGCCTCACGGTTGCTCTGGGGA...ATTTATGCCCATTCGAAATGTTTTTGTTCTTGATATGTAGCCAAGGCTAGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTAGTAGAACTGAACACTGGGAATAAAGGCCAGTGTTGGTTAGACTTTGGGCAGCCTTATGCAGACTaGTCATGCCATCATTGTCGA | + |
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Preference number: 2 (lower is better) Translates to: RLVELNTGNKGQCWLDFGQPYAD*SCHHCR Trigger: TCGACAATGATGGCATGACCAGTCTGCATAAGGCTG...CCCAAAGTCTAACCAACACTGGCCTTTATTCCCAGTGTTCAGTTCTACTAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCTAGCCTTGGCTACATATCAAGAACAAAAACATTTCGAATGGGCATAAATGGGTCTGTGGCCTTCTaGATGAAATACTTCACACGG | + |
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Preference number: 2 (lower is better) Translates to: EASLGYISRTKTFRMGINGSVAF*MKYFTR Trigger: CCGTGTGAAGTATTTCATCCAGAAGGCCACAGACCC...ATTTATGCCCATTCGAAATGTTTTTGTTCTTGATATGTAGCCAAGGCTAGCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR CCA 72 bp | GCAGCAGCCGTGCGATTTCCGTGTGCCCACAGTAGCTaGCCCGGTGCAAAGCCGTGGCGCCCCCGTGGGTCT | + |
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Preference number: 3 (lower is better) Translates to: AAAVRFPCAHSS*PGAKPWRPRGS Trigger: AGACCCACGGGGGCGCCACGGCTTTGCACCGGGCCAGCTACTGTGGGCACACGGAAATCGCACGGCTGCTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR CCA 72 bp | ACTGGCCAGGAGGGGCTCTTCTGGGCAATCTGGCCCTaGTCCCGGCAGCATGACGCTGAGCAAGGCAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: TGQEGLFWAIWP*SRQHDAEQGRG Trigger: ACCCCTGCCTTGCTCAGCGTCATGCTGCCGGGACCAGGGCCAGATTGCCCAGAAGAGCCCCTCCTGGCCAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
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| 3UTR CCA 72 bp | CTGGCCCGGTGCAAAGCCGTGGCGCCCCCGTGGGTCTaGGCGTCACACTTCGCTCCACTTTCCAGCAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: LARCKAVAPPWV*ASHFAPLSSRN Trigger: GTTTCTGCTGGAAAGTGGAGCGAAGTGTGACGCCCAGACCCACGGGGGCGCCACGGCTTTGCACCGGGCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR TCA 72 bp | ATTCCATCAGCCGCCATGCCTGGTACCCATGCCTGCTaGGTCTCTCACCCCCAGTGCTGGGGAAGCCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: IPSAAMPGTHAC*VSHPQCWGSQG Trigger: GCCCTGGCTTCCCCAGCACTGGGGGTGAGAGACTCAGCAGGCATGGGTACCAGGCATGGCGGCTGATGGAAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR CCA 72 bp | GCTCCCGAGTGCTGGGATTCCATCAGCCGCCATGCCTaGTACCCATGCCTGCTGAGTCTCTCACCCCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: APECWDSISRHA*YPCLLSLSPPV Trigger: CACTGGGGGTGAGAGACTCAGCAGGCATGGGTACCAGGCATGGCGGCTGATGGAATCCCAGCACTCGGGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR GCA 72 bp | TGCTGGGATTCCATCAGCCGCCATGCCTGGTACCCATaGCTGCTGAGTCTCTCACCCCCAGTGCTGGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: CWDSISRHAWYP*LLSLSPPVLGK Trigger: CTTCCCCAGCACTGGGGGTGAGAGACTCAGCAGGCATGGGTACCAGGCATGGCGGCTGATGGAATCCCAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR GCA 72 bp | CTAAGCTCCCGAGTGCTGGGATTCCATCAGCCGCCATaGCTGGTACCCATGCCTGCTGAGTCTCTCACCCCC | + |
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Preference number: 3 (lower is better) Translates to: LSSRVLGFHQPP*LVPMPAESLTP Trigger: GGGGGTGAGAGACTCAGCAGGCATGGGTACCAGGCATGGCGGCTGATGGAATCCCAGCACTCGGGAGCTTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR GCA 72 bp | TTTCCAGCAGAAACTGGCAAACAGCATAGTGCCCGTTaGGGCTGGCGTAGTGCAGTGCGGTGTAGCCGGCAG | + |
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Preference number: 3 (lower is better) Translates to: FPAETGKQHSAR*GWRSAVRCSRQ Trigger: CTGCCGGCTACACCGCACTGCACTACGCCAGCCGCAACGGGCACTATGCTGTTTGCCAGTTTCTGCTGGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR CCA 72 bp | ATGCCATCATTGTCGACCAGCCAGGGGTTGGACCCATaGGATAGCAGCAGCCGTGCGATTTCCGTGTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: MPSLSTSQGLDP*DSSSRAISVCP Trigger: TGGGCACACGGAAATCGCACGGCTGCTGCTATCCCATGGGTCCAACCCCTGGCTGGTCGACAATGATGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR CCA 72 bp | GACTGGTCATGCCATCATTGTCGACCAGCCAGGGGTTaGACCCATGGGATAGCAGCAGCCGTGCGATTTCCG | + |
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Preference number: 3 (lower is better) Translates to: DWSCHHCRPARG*THGIAAAVRFP Trigger: CGGAAATCGCACGGCTGCTGCTATCCCATGGGTCCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR GCA 72 bp | CGTGACCCTTCTCCGCAGCCTTATGCAGACTGGTCATaGCATCATTGTCGACCAGCCAGGGGTTGGACCCAT | + |
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Preference number: 3 (lower is better) Translates to: RDPSPQPYADWS*HHCRPARGWTH Trigger: ATGGGTCCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGGCTGCGGAGAAGGGTCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR CCA 72 bp | GCTGGCGTAGTGCAGTGCGGTGTAGCCGGCAGAATCTaGCTGGCTAGGGTCTGTGGCCTTCTGGATGAAATA | + |
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Preference number: 3 (lower is better) Translates to: AGVVQCGVAGRI*LARVCGLLDEI Trigger: TATTTCATCCAGAAGGCCACAGACCCTAGCCAGCCAGATTCTGCCGGCTACACCGCACTGCACTACGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR CCA 72 bp | TGTCCTCGTGACCCTTCTCCGCAGCCTTATGCAGACTaGTCATGCCATCATTGTCGACCAGCCAGGGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: CPRDPSPQPYAD*SCHHCRPARGW Trigger: CCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGGCTGCGGAGAAGGGTCACGAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
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| 3UTR TCA 72 bp | CAGCTGGTATGTGAGGCCTGCATTACCAGGCCAGGCTaGGCAGTGAGTGGGTACTCTCCCCTGCTGTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: QLVCEACITRPG*AVSGYSPLLFV Trigger: TACAAACAGCAGGGGAGAGTACCCACTCACTGCTCAGCCTGGCCTGGTAATGCAGGCCTCACATACCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| 3UTR CCA 72 bp | ATGGCGTTAAGGAGACAGGGTCTCTGTAGCTCTGGCTaGCCTGGAGCTCGAAGAGAGATCTTCCTACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: MALRRQGLCSSG*PGARREIFLPQ Trigger: CTGAGGTAGGAAGATCTCTCTTCGAGCTCCAGGCCAGCCAGAGCTACAGAGACCCTGTCTCCTTAACGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| 3UTR GCA 72 bp | CTCACCCCCAGTGCTGGGGAAGCCAGGGCCTTGTGCTaGTCTCTTGCAGAGTTTGTAAATGAGTCTGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LTPSAGEARALC*SLAEFVNESVS Trigger: ACTTACAGACTCATTTACAAACTCTGCAAGAGAGCAGCACAAGGCCCTGGCTTCCCCAGCACTGGGGGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAAGACAGGTGTGCAGCCCGACTAGCAATCAATGCCAAACAAACAGAAAAGTCGACCAGCCAGGGGTaGGACCCATGGGATAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VKDRCAARLAINAKQTEKSTSQG*DPWDSS Trigger: GCTGCTATCCCATGGGTCCAACCCCTGGCTGGTCGA...CTTTTCTGTTTGTTTGGCATTGATTGCTAGTCGGGCTGCACACCTGTCTTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| 3UTR TCA 72 bp | TCTGTCCACAGACTTCCTGGGTCCCCAGAGCAACCGTaGGGCAATCCTTTTCACGGTTCTGTTCTAAACACG | + |
|
Preference number: 3 (lower is better) Translates to: SVHRLPGSPEQP*GNPFHGSVLNT Trigger: CGTGTTTAGAACAGAACCGTGAAAAGGATTGCCTCACGGTTGCTCTGGGGACCCAGGAAGTCTGTGGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| 3UTR TCA 72 bp | ACCTATATCCCCTTTACCTGTTGCCCAGGCTGGCCTTaGACTCCTCTGCAGCCTCATGAACAGCTGGTATGT | + |
|
Preference number: 3 (lower is better) Translates to: TYIPFTCCPGWP*TPLQPHEQLVC Trigger: ACATACCAGCTGTTCATGAGGCTGCAGAGGAGTTCAAGGCCAGCCTGGGCAACAGGTAAAGGGGATATAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAAAGACAGGTGTGCAGCCCGACTAGCAATCAATGCCAAACAAACAGAAAAGTTGCCCAGGCTGGCCTaGAACTCCTCTGCAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VKDRCAARLAINAKQTEKLPRLA*NSSAAS Trigger: TGAGGCTGCAGAGGAGTTCAAGGCCAGCCTGGGCAA...CTTTTCTGTTTGTTTGGCATTGATTGCTAGTCGGGCTGCACACCTGTCTTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| 3UTR-3UTR CAA 90 bp | CATACTGTGGTACAGCTTGGCGCTCTTCCCACACTGCCACCAACGCTGGTACAGAGTTGGAGGCTAGCCTaGGCTACATATCAAGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: HTVVQLGALPTLPPTLVQSWRLA*ATYQEQ Trigger: TTGTTCTTGATATGTAGCCAAGGCTAGCCTCCAACT...CTGTACCAGCGTTGGTGGCAGTGTGGGAAGAGCGCCAAGCTGTACCACAGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATCTTCCTACCTCAGACGCTGGGATTAAAGGTGTGGGCAGCCATACCTAGCTTGAACACAGGGCTTTaGCATGTCAGGCAAGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: EIFLPQTLGLKVWAAIPSLNTGL*HVRQAF Trigger: GAATGCTTGCCTGACATGCAAAAGCCCTGTGTTCAA...GCTAGGTATGGCTGCCCACACCTTTAATCCCAGCGTCTGAGGTAGGAAGATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| 3UTR TCA 72 bp | GTGAGTGGGTACTCTCCCCTGCTGTTTGTAATGGAGTaGGTGTGCTCACTTAGGGCATCTGTCCACAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: VSGYSPLLFVME*VCSLRASVHRL Trigger: AAGTCTGTGGACAGATGCCCTAAGTGAGCACACTCACTCCATTACAAACAGCAGGGGAGAGTACCCACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| 3UTR CCA 72 bp | TGCCTCACAGCTCGTTATTTGAAGAGTGTCATACTGTaGTACAGCTTGGCGCTCTTCCCACACTGCCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: CLTARYLKSVIL*YSLALFPHCHQ Trigger: TTGGTGGCAGTGTGGGAAGAGCGCCAAGCTGTACCACAGTATGACACTCTTCAAATAACGAGCTGTGAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTGCTGTTCTAAAAGAAACCTGCCCCCAGCTCATTCAGCCAGCAAACAGCTTTTGAACACAGGGCTTTaGCATGTCAGGCAAGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: GCCSKRNLPPAHSASKQLLNTGL*HVRQAF Trigger: GAATGCTTGCCTGACATGCAAAAGCCCTGTGTTCAA...AAGCTGTTTGCTGGCTGAATGAGCTGGGGGCAGGTTTCTTTTAGAACAGCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| 3UTR CCA 72 bp | CTAGTAGAACTGAACACTGGGAATAAAGGCCAGTGTTaGTTAGACTTTGGGGACCACACTGCTTCCCCACGA | + |
|
Preference number: 3 (lower is better) Translates to: LVELNTGNKGQC*LDFGDHTASPR Trigger: TCGTGGGGAAGCAGTGTGGTCCCCAAAGTCTAACCAACACTGGCCTTTATTCCCAGTGTTCAGTTCTACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAAGAACAAAAACATTTCGAATGGGCATAAATAGGAAAGTCAAAGACAGGTGTTTGCCCAGGCTGGCCTaGAACTCCTCTGCAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SRTKTFRMGINRKVKDRCLPRLA*NSSAAS Trigger: TGAGGCTGCAGAGGAGTTCAAGGCCAGCCTGGGCAA...ACACCTGTCTTTGACTTTCCTATTTATGCCCATTCGAAATGTTTTTGTTCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| 3UTR TCA 72 bp | CTAGATTGCCATCTATACTGTATGTACCAGTTTCCATaGCCACAAGCCAGGCTACTTAAGGCAAGTCATTGC | + |
|
Preference number: 3 (lower is better) Translates to: LDCHLYCMYQFP*PQARLLKASHC Trigger: GCAATGACTTGCCTTAAGTAGCCTGGCTTGTGGTCATGGAAACTGGTACATACAGTATAGATGGCAATCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| 3UTR TCA 72 bp | AATGAGTCTGTAAGTAGACACCTTTGTAATCAAGGATaGGTCTGCCTATGTTGCCATGGAGACGTCAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: NESVSRHLCNQG*VCLCCHGDVND Trigger: ATCATTGACGTCTCCATGGCAACATAGGCAGACTCATCCTTGATTACAAAGGTGTCTACTTACAGACTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| 3UTR CCA 72 bp | GCTTTATTTTCTTCCAAACGGCTATGTGTCTGTACATaGACTAACTTATATGATCACCTGTCCAGACTCACA | + |
|
Preference number: 3 (lower is better) Translates to: ALFSSKRLCVCT*TNLYDHLSRLT Trigger: TGTGAGTCTGGACAGGTGATCATATAAGTTAGTCCATGTACAGACACATAGCCGTTTGGAAGAAAATAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCTCTGGCTGGCCTGGAGCTCGAAGAGAGATCTTCCTACCTCAGACGCTGGGCGCCCCCGTGGGTCTaGGCGTCACACTTCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VALAGLELEERSSYLRRWAPPWV*ASHFAP Trigger: TGGAGCGAAGTGTGACGCCCAGACCCACGGGGGCGC...CCAGCGTCTGAGGTAGGAAGATCTCTCTTCGAGCTCCAGGCCAGCCAGAGCTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001172.12 |
||
| CDS-3UTR CCA 90 bp | GCTCACTTAGGGCATCTGTCCACAGACTTCCTGGGTCCCCAGAGCAACCGTGAGCCGGCAGAATCTGGCTaGCTAGGGTCTGTGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AHLGHLSTDFLGPQSNREPAESG*LGSVAF Trigger: GAAGGCCACAGACCCTAGCCAGCCAGATTCTGCCGG...CTCACGGTTGCTCTGGGGACCCAGGAAGTCTGTGGACAGATGCCCTAAGTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001172.12 |
||
| CDS-3UTR CCA 90 bp | CCACACTGCTTCCCCACGATAGTAGGGATTGAACACAGGGCTTTTGCATGTCAGTCCCGGAGATGGGGCTaGAGATTGCCCGCCGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PHCFPTIVGIEHRAFACQSRRWG*RLPAAG Trigger: GCCGGCGGCGGGCAATCTCCAGCCCCATCTCCGGGA...CTGACATGCAAAAGCCCTGTGTTCAATCCCTACTATCGTGGGGAAGCAGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS-3UTR GCA 90 bp | TCATACTGTGGTACAGCTTGGCGCTCTTCCCACACTGCCACCAACGCTGGTACAATCTCCTCCAGCGTCTaGTGTACCCCGGGCACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYCGTAWRSSHTATNAGTISSSV*CTPGTA Trigger: TGCGGTGCCCGGGGTACAGCAGACGCTGGAGGAGAT...TGTACCAGCGTTGGTGGCAGTGTGGGAAGAGCGCCAAGCTGTACCACAGTATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS-3UTR GCA 90 bp | CATACTGTGGTACAGCTTGGCGCTCTTCCCACACTGCCACCAACGCTGGTACAGAGTCGAGGGGCTTCCTaGCACGCTTTGAAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTVVQLGALPTLPPTLVQSRGAS*HALKPA Trigger: GGCTGGCTTCAAAGCGTGGCAGGAAGCCCCTCGACT...CTGTACCAGCGTTGGTGGCAGTGTGGGAAGAGCGCCAAGCTGTACCACAGTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS-3UTR TCA 90 bp | GCTCACTTAGGGCATCTGTCCACAGACTTCCTGGGTCCCCAGAGCAACCGTGAGGAGCAAATGTCCTCGTaGCCCTTCTCCGCAGCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AHLGHLSTDFLGPQSNREEQMSS*PFSAAL Trigger: TAAGGCTGCGGAGAAGGGTCACGAGGACATTTGCTC...CTCACGGTTGCTCTGGGGACCCAGGAAGTCTGTGGACAGATGCCCTAAGTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001172.12 |
||
| 3UTR CAA 72 bp | AGACTGGTCATGCCATCATTGTCGACCAGCCAGGGGTaGGACCCATGGGATAGCAGCAGCCGTGCGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLVMPSLSTSQG*DPWDSSSRAIS Trigger: GGAAATCGCACGGCTGCTGCTATCCCATGGGTCCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGCTGTTCTAAAAGAAACCTGCCCCCAGCTCATTCAGCCAGCAAACAGCTTCAGGGGTTGGACCCATaGGATAGCAGCAGCCGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GCCSKRNLPPAHSASKQLQGLDP*DSSSRA Trigger: CGCACGGCTGCTGCTATCCCATGGGTCCAACCCCTG...AAGCTGTTTGCTGGCTGAATGAGCTGGGGGCAGGTTTCTTTTAGAACAGCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001172.12 |
||
| CDS-3UTR TCA 90 bp | CCACACTGCTTCCCCACGATAGTAGGGATTGAACACAGGGCTTTTGCATGTCAGCTTCCTGCCACGCTTTaGAGCCAGCCTTCCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PHCFPTIVGIEHRAFACQLPATL*SQPSCT Trigger: GGTGCAGGAAGGCTGGCTTCAAAGCGTGGCAGGAAG...CTGACATGCAAAAGCCCTGTGTTCAATCCCTACTATCGTGGGGAAGCAGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS-3UTR GCA 90 bp | AAGAAACCTGCCCCCAGCTCATTCAGCCAGCAAACAGCTTTTATTACACACTCCCAGCATAGTGCCCGTTaGGGCTGGCGTAGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KKPAPSSFSQQTAFITHSQHSAR*GWRSAV Trigger: CACTGCACTACGCCAGCCGCAACGGGCACTATGCTG...GGAGTGTGTAATAAAAGCTGTTTGCTGGCTGAATGAGCTGGGGGCAGGTTTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001172.12 |
||
| CDS-3UTR CCA 90 bp | GAGGCTAGCCTTGGCTACATATCAAGAACAAAAACATTTCGAATGGGCATAAATCCCGGTGCAAAGCCGTaGCGCCCCCGTGGGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EASLGYISRTKTFRMGINPGAKP*RPRGSG Trigger: CCCAGACCCACGGGGGCGCCACGGCTTTGCACCGGG...ATTTATGCCCATTCGAAATGTTTTTGTTCTTGATATGTAGCCAAGGCTAGCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000001172.12 |
||
| 3UTR CAA 72 bp | GCTCGTTATTTGAAGAGTGTCATACTGTGGTACAGCTaGGCGCTCTTCCCACACTGCCACCAACGCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ARYLKSVILWYS*ALFPHCHQRWY Trigger: GTACCAGCGTTGGTGGCAGTGTGGGAAGAGCGCCAAGCTGTACCACAGTATGACACTCTTCAAATAACGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS-3UTR CCA 90 bp | GAGATCTTCCTACCTCAGACGCTGGGATTAAAGGTGTGGGCAGCCATACCTAGCGGGTCTGTGGCCTTCTaGATGAAATACTTCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: EIFLPQTLGLKVWAAIPSGSVAF*MKYFTR Trigger: CCGTGTGAAGTATTTCATCCAGAAGGCCACAGACCC...GCTAGGTATGGCTGCCCACACCTTTAATCCCAGCGTCTGAGGTAGGAAGATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001172.12 |
||
| 3UTR CAA 72 bp | CATTCAGGAAGCTGGGGCCTGAGGAGGGCTCCAAAGTaGGAGGCTAGCCTTGGCTACATATCAAGAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSGSWGLRRAPK*EASLGYISRTK Trigger: TTTTGTTCTTGATATGTAGCCAAGGCTAGCCTCCAACTTTGGAGCCCTCCTCAGGCCCCAGCTTCCTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| CDS-3UTR GCA 90 bp | TCAAGAACAAAAACATTTCGAATGGGCATAAATAGGAAAGTCAAAGACAGGTGTATCTCCTCCAGCGTCTaGTGTACCCCGGGCACCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTKTFRMGINRKVKDRCISSSV*CTPGTA Trigger: TGCGGTGCCCGGGGTACAGCAGACGCTGGAGGAGAT...ACACCTGTCTTTGACTTTCCTATTTATGCCCATTCGAAATGTTTTTGTTCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000207843.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCTAGCCTTGGCTACATATCAAGAACAAAAACATTTCGAATGGGCATAAATCTGTGGCCTTCTGGATaGAATACTTCACACGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EASLGYISRTKTFRMGINLWPSG*NTSHGP Trigger: TGGGCCGTGTGAAGTATTTCATCCAGAAGGCCACAG...ATTTATGCCCATTCGAAATGTTTTTGTTCTTGATATGTAGCCAAGGCTAGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001172.12 |
||
| CDS-3UTR CCA 90 bp | GAGGCTAGCCTTGGCTACATATCAAGAACAAAAACATTTCGAATGGGCATAAATCAGCCTTATGCAGACTaGTCATGCCATCATTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: EASLGYISRTKTFRMGINQPYAD*SCHHCR Trigger: TCGACAATGATGGCATGACCAGTCTGCATAAGGCTG...ATTTATGCCCATTCGAAATGTTTTTGTTCTTGATATGTAGCCAAGGCTAGCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001172.12 |
||
| CDS GCA 90 bp | CCAGATTCCCGTCCGCACTCGAGACGGAGTAGTCGAGGGGCTTCCTaGCACGCTTTGAAGCCAGCCTTCCTGCACCAGGCCCGGAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PDSRPHSRRSSRGAS*HALKPAFLHQARKL Trigger: GAGCTTCCGGGCCTGGTGCAGGAAGGCTGGCTTCAAAGCGTGGCAGGAAGCCCCTCGACTACTCCGTCTCGAGTGCGGACGGGAATCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS TCA 90 bp | GGGAGCAAATGTCCTCGTGACCCTTCTCCGCAGCCTTATGCAGGCTaGGGGAGGCAGCGACATACACACCTTATGCAGACTGGTCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: GSKCPRDPSPQPYAG*GRQRHTHLMQTGHA Trigger: GGCATGACCAGTCTGCATAAGGTGTGTATGTCGCTGCCTCCCTCAGCCTGCATAAGGCTGCGGAGAAGGGTCACGAGGACATTTGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194894.4 |
||
| CDS GCA 90 bp | CGCAGCCTTATGCAGGCTGAGGGAGGCAGCGACATACACACCTTATaGAGACTGGTCATGCCATCATTGTCGACCAGCCAGGGGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSLMQAEGGSDIHTL*RLVMPSLSTSQGLD Trigger: GTCCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGGTGTGTATGTCGCTGCCTCCCTCAGCCTGCATAAGGCTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194894.4 |
||
| CDS-3UTR CAA 90 bp | TCATACTGTGGTACAGCTTGGCGCTCTTCCCACACTGCCACCAACGCTGGTACAGCTTCCTGCCACGCTTaGAAGCCAGCCTTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SYCGTAWRSSHTATNAGTASCHA*KPAFLH Trigger: GTGCAGGAAGGCTGGCTTCAAAGCGTGGCAGGAAGC...TGTACCAGCGTTGGTGGCAGTGTGGGAAGAGCGCCAAGCTGTACCACAGTATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS GCA 90 bp | AGGCTGAGGGAGGCAGCGACATACACACCTTATGCAGACTGGTCATaGCATCATTGTCGACCAGCCAGGGGTTGGACCCATGGGATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLREAATYTPYADWS*HHCRPARGWTHGIA Trigger: TGCTATCCCATGGGTCCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGGTGTGTATGTCGCTGCCTCCCTCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194894.4 |
||
| CDS-3UTR CAA 90 bp | GGGTGCTGTTCTAAAAGAAACCTGCCCCCAGCTCATTCAGCCAGCAAACAGCTTTCGACCAGCCAGGGGTaGGACCCATGGGATAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCCSKRNLPPAHSASKQLSTSQG*DPWDSS Trigger: GCTGCTATCCCATGGGTCCAACCCCTGGCTGGTCGA...AAGCTGTTTGCTGGCTGAATGAGCTGGGGGCAGGTTTCTTTTAGAACAGCACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000001172.12 |
||
| CDS GCA 72 bp | CCTTCAGTCCACGTTCCCGGAGATGGGGCTGGAGATTaGCCGCCGCCGGCAACGCGGCCGCCTCACCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSVHVPGDGAGD*PPPATRPPHPS Trigger: AGAGGGGTGAGGCGGCCGCGTTGCCGGCGGCGGGCAATCTCCAGCCCCATCTCCGGGAACGTGGACTGAAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS TCA 72 bp | CGAGACGGAGTAGTCGAGGGGCTTCCTGCCACGCTTTaGAGCCAGCCTTCCTGCACCAGGCCCGGAAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RDGVVEGLPATL*SQPSCTRPGSS Trigger: GGAGCTTCCGGGCCTGGTGCAGGAAGGCTGGCTTCAAAGCGTGGCAGGAAGCCCCTCGACTACTCCGTCTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS GCA 72 bp | CGTCCGCACTCGAGACGGAGTAGTCGAGGGGCTTCCTaGCACGCTTTGAAGCCAGCCTTCCTGCACCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPHSRRSSRGAS*HALKPAFLHQA Trigger: GGCCTGGTGCAGGAAGGCTGGCTTCAAAGCGTGGCAGGAAGCCCCTCGACTACTCCGTCTCGAGTGCGGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS CAA 72 bp | TCGAGACGGAGTAGTCGAGGGGCTTCCTGCCACGCTTaGAAGCCAGCCTTCCTGCACCAGGCCCGGAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRRSSRGASCHA*KPAFLHQARKL Trigger: GAGCTTCCGGGCCTGGTGCAGGAAGGCTGGCTTCAAAGCGTGGCAGGAAGCCCCTCGACTACTCCGTCTCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207843.2 |
||
| CDS CAA 90 bp | ACCTTATGCAGACTGGTCATGCCATCATTGTCGACCAGCCAGGGGTaGGACCCATGGGATAGCAGCAGCCGTGCGATTTCCGTGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TLCRLVMPSLSTSQG*DPWDSSSRAISVCP Trigger: TGGGCACACGGAAATCGCACGGCTGCTGCTATCCCATGGGTCCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194894.4 |
||
| CDS CCA 72 bp | CCGGCAGAATCTGGCTGGCTAGGGTCTGTGGCCTTCTaGATGAAATACTTCACACGGCCCAGGTCTCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: PAESGWLGSVAF*MKYFTRPRSPF Trigger: GAATGGAGACCTGGGCCGTGTGAAGTATTTCATCCAGAAGGCCACAGACCCTAGCCAGCCAGATTCTGCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001172.12 ENSMUST00000194894.4 |
||
| CDS CCA 72 bp | CTGAGGGAGGCAGCGACATACACACCTTATGCAGACTaGTCATGCCATCATTGTCGACCAGCCAGGGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LREAATYTPYAD*SCHHCRPARGW Trigger: CCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGGTGTGTATGTCGCTGCCTCCCTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194894.4 |
||
| CDS GCA 72 bp | GAGGCAGCGACATACACACCTTATGCAGACTGGTCATaGCATCATTGTCGACCAGCCAGGGGTTGGACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: EAATYTPYADWS*HHCRPARGWTH Trigger: ATGGGTCCAACCCCTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGGTGTGTATGTCGCTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194894.4 |
||
| CDS GCA 72 bp | ATGCAGGCTGAGGGAGGCAGCGACATACACACCTTATaGAGACTGGTCATGCCATCATTGTCGACCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: MQAEGGSDIHTL*RLVMPSLSTSQ Trigger: CTGGCTGGTCGACAATGATGGCATGACCAGTCTGCATAAGGTGTGTATGTCGCTGCCTCCCTCAGCCTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194894.4 |
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