Pregenerated sensors for ANKRD37 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050914Ensembl transcript IDs: ENSMUST00000053558.10, ENSMUST00000153674.8
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCTGCCAGAGAAGAAAGCACGCAAGGCCGCCACCTGCAGCTAGGTaGGCAGGCGACTGCTCCTGGGGATCCGGAGGTGCGTTCACTGAT | + |
|
Preference number: 1 (lower is better) Translates to: SCQRRKHARPPPAAR*AGDCSWGSGGAFTD Trigger: ATCAGTGAACGCACCTCCGGATCCCCAGGAGCAGTCGCCTGCTCACCTAGCTGCAGGTGGCGGCCTTGCGTGCTTTCTTCTCTGGCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR CCA 90 bp | CAGCTGTCTGCCCATTCTTATTGCATACGCCAATCTGGACATCACTaGCCACAAGGAGGCTCAGGCAGTCCAGGCTTCCAACCTTTGCTG | + |
|
Preference number: 1 (lower is better) Translates to: QLSAHSYCIRQSGHH*PQGGSGSPGFQPLL Trigger: CAGCAAAGGTTGGAAGCCTGGACTGCCTGAGCCTCCTTGTGGCCAGTGATGTCCAGATTGGCGTATGCAATAAGAATGGGCAGACAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR GCA 90 bp | GCACGGGGGTCACGCTCCTGTTGCTCACCTGATGATCTTGCCGTCTaGATACATTTAATCATTGTTAGAAACCTGGCACATTCTGGAAAG | + |
|
Preference number: 1 (lower is better) Translates to: ARGSRSCCSPDDLAV*IHLIIVRNLAHSGK Trigger: CTTTCCAGAATGTGCCAGGTTTCTAACAATGATTAAATGTATGCAGACGGCAAGATCATCAGGTGAGCAACAGGAGCGTGACCCCCGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR GCA 90 bp | GCACATTCTGGAAAGCCATATGACCAAGCAAGATCTTCAGCTGTCTaGCCATTCTTATTGCATACGCCAATCTGGACATCACTGGCCACA | + |
|
Preference number: 1 (lower is better) Translates to: AHSGKPYDQARSSAV*PFLLHTPIWTSLAT Trigger: TGTGGCCAGTGATGTCCAGATTGGCGTATGCAATAAGAATGGGCAGACAGCTGAAGATCTTGCTTGGTCATATGGCTTTCCAGAATGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR CCA 90 bp | AAGTTTTCCTCCTCAGGAGTTTCATCATGTGATGAGCCAAAGCAATaGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: KFSSSGVSSCDEPKQ*LVDLSEVKLFFKPL Trigger: AAGAGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTCATCACATGATGAAACTCCTGAGGAGGAAAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053558.10 ENSMUST00000153674.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCCACAGTCCTGAAACTCCGCTTCTGTCTCAGCACAGGAGCACGGGGGTCAGCTTCCAACCTTTGCTaGCTTGTGGAGTGGAGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSTVLKLRFCLSTGARGSASNLC*LVEWSF Trigger: GAAACTCCACTCCACAAGGCAGCAAAGGTTGGAAGC...TGACCCCCGTGCTCCTGTGCTGAGACAGAAGCGGAGTTTCAGGACTGTGGAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCAAAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTGCAGGCGACTGCTCCTaGGGATCCGGAGGTGCGTTC | + |
|
Preference number: 2 (lower is better) Translates to: EPKQWLVDLSEVKLFFKPAGDCS*GSGGAF Trigger: GAACGCACCTCCGGATCCCCAGGAGCAGTCGCCTGC...AGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR CAA 90 bp | AAGCCATATGACCAAGCAAGATCTTCAGCTGTCTGCCCATTCTTATaGCATACGCCAATCTGGACATCACTGGCCACAAGGAGGCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: KPYDQARSSAVCPFL*HTPIWTSLATRRLR Trigger: CCTGAGCCTCCTTGTGGCCAGTGATGTCCAGATTGGCGTATGCAATAAGAATGGGCAGACAGCTGAAGATCTTGCTTGGTCATATGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGCTGTCTGCCCATTCTTATTGCATACGCCAATCTGGACATCACTGGCCACTGCTGCCTTGTGGAGTaGAGTTTCTCCCAAGACATC | + |
|
Preference number: 2 (lower is better) Translates to: FSCLPILIAYANLDITGHCCLVE*SFSQDI Trigger: GATGTCTTGGGAGAAACTCCACTCCACAAGGCAGCA...GTGGCCAGTGATGTCCAGATTGGCGTATGCAATAAGAATGGGCAGACAGCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCAAAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTGCACCTGTTTGCAGCTaGCAGAGAAGAAAGCACGCA | + |
|
Preference number: 2 (lower is better) Translates to: EPKQWLVDLSEVKLFFKPAPVCS*QRRKHA Trigger: TGCGTGCTTTCTTCTCTGGCAGCTGCAAACAGGTGC...AGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR-3UTR TCA 90 bp | CATTTAATCATTGTTAGAAACCTGGCACATTCTGGAAAGCCATATGACCAAGCACGGAGGTGCGTTCACTaGTGCTCCTGTCTCCAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: HLIIVRNLAHSGKPYDQARRCVH*CSCLQQ Trigger: TTGCTGGAGACAGGAGCATCAGTGAACGCACCTCCG...TGCTTGGTCATATGGCTTTCCAGAATGTGCCAGGTTTCTAACAATGATTAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCAAAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTGATGAGCCAAAGCAATaGCTTGTAGATCTGTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: EPKQWLVDLSEVKLFFKPDEPKQ*LVDLSE Trigger: TTCAGACAGATCTACAAGCCATTGCTTTGGCTCATC...AGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053558.10 ENSMUST00000153674.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCAAAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTTCATTGTTAGAAACCTaGCACATTCTGGAAAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: EPKQWLVDLSEVKLFFKPSLLET*HILESH Trigger: ATGGCTTTCCAGAATGTGCCAGGTTTCTAACAATGA...AGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGCCGTCTGCATACATTTAATCATTGTTAGAAACCTGGCACATTCTGGAAAGGATGAGCCAAAGCAATaGCTTGTAGATCTGTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LAVCIHLIIVRNLAHSGKDEPKQ*LVDLSE Trigger: TTCAGACAGATCTACAAGCCATTGCTTTGGCTCATC...CTTTCCAGAATGTGCCAGGTTTCTAACAATGATTAAATGTATGCAGACGGCAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR TCA 72 bp | AGAAGAAAGCACGCAAGGCCGCCACCTGCAGCTAGGTaGGCAGGCGACTGCTCCTGGGGATCCGGAGGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: RRKHARPPPAAR*AGDCSWGSGGA Trigger: CGCACCTCCGGATCCCCAGGAGCAGTCGCCTGCTCACCTAGCTGCAGGTGGCGGCCTTGCGTGCTTTCTTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR GCA 72 bp | ACATCCTGTTGGTTGAGGTCAGCACCTGTTTGCAGCTaGCAGAGAAGAAAGCACGCAAGGCCGCCACCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TSCWLRSAPVCS*QRRKHARPPPA Trigger: TGCAGGTGGCGGCCTTGCGTGCTTTCTTCTCTGGCAGCTGCAAACAGGTGCTGACCTCAACCAACAGGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR GCA 72 bp | AAGGAGGCTCAGGCAGTCCAGGCTTCCAACCTTTGCTaGCTTGTGGAGTGGAGTTTCTCCCAAGACATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KEAQAVQASNLC*LVEWSFSQDIL Trigger: CAGGATGTCTTGGGAGAAACTCCACTCCACAAGGCAGCAAAGGTTGGAAGCCTGGACTGCCTGAGCCTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR GCA 72 bp | CACAAGGAGGCTCAGGCAGTCCAGGCTTCCAACCTTTaGTGCCTTGTGGAGTGGAGTTTCTCCCAAGACATC | + |
|
Preference number: 3 (lower is better) Translates to: HKEAQAVQASNL*CLVEWSFSQDI Trigger: GATGTCTTGGGAGAAACTCCACTCCACAAGGCAGCAAAGGTTGGAAGCCTGGACTGCCTGAGCCTCCTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR CCA 72 bp | GCCCATTCTTATTGCATACGCCAATCTGGACATCACTaGCCACAAGGAGGCTCAGGCAGTCCAGGCTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: AHSYCIRQSGHH*PQGGSGSPGFQ Trigger: TTGGAAGCCTGGACTGCCTGAGCCTCCTTGTGGCCAGTGATGTCCAGATTGGCGTATGCAATAAGAATGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR CCA 72 bp | TCAGCTGTCTGCCCATTCTTATTGCATACGCCAATCTaGACATCACTGGCCACAAGGAGGCTCAGGCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SAVCPFLLHTPI*TSLATRRLRQS Trigger: GGACTGCCTGAGCCTCCTTGTGGCCAGTGATGTCCAGATTGGCGTATGCAATAAGAATGGGCAGACAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR GCA 72 bp | GGAAAGCCATATGACCAAGCAAGATCTTCAGCTGTCTaGCCATTCTTATTGCATACGCCAATCTGGACATCA | + |
|
Preference number: 3 (lower is better) Translates to: GKPYDQARSSAV*PFLLHTPIWTS Trigger: TGATGTCCAGATTGGCGTATGCAATAAGAATGGGCAGACAGCTGAAGATCTTGCTTGGTCATATGGCTTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTTAATCATTGTTAGAAACCTGGCACATTCTGGAAAGCCATATGACCAAGCATCCCAAGACATCCTGTaGGTTGAGGTCAGCACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HLIIVRNLAHSGKPYDQASQDIL*VEVSTC Trigger: ACAGGTGCTGACCTCAACCAACAGGATGTCTTGGGA...TGCTTGGTCATATGGCTTTCCAGAATGTGCCAGGTTTCTAACAATGATTAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR CCA 72 bp | TCCTCAGGAGTTTCATCATGTGATGAGCCAAAGCAATaGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSGVSSCDEPKQ*LVDLSEVKLFF Trigger: GAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTCATCACATGATGAAACTCCTGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053558.10 ENSMUST00000153674.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTTGCAGCTGCCAGAGAAGAAAGCACGCAAGGCCGCCACCTGCAGCTAGGTTGTCCCCAGCCCCGCTaGGGCCTCACGTACCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LFAAAREESTQGRHLQLGCPQPR*GLTYPN Trigger: GTTTGGGTACGTGAGGCCGCAGCGGGGCTGGGGACA...ACCTAGCTGCAGGTGGCGGCCTTGCGTGCTTTCTTCTCTGGCAGCTGCAAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| CDS-3UTR CCA 90 bp | GATGAGCCAAAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGGCAGGCGACTGCTCCTaGGGATCCGGAGGTGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DEPKQWLVDLSEVKLFFKAGDCS*GSGGAF Trigger: GAACGCACCTCCGGATCCCCAGGAGCAGTCGCCTGC...CTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR CCA 90 bp | CAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTCTTCTTTCCAGCGTTCCCACGGCCTaGTTCTGCCCAGCGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QWLVDLSEVKLFFKPLLSSVPTA*FCPARC Trigger: ACATCGCGCTGGGCAGAACCAGGCCGTGGGAACGCT...GGAAAGAAGAGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTCTTCTTTCCTCTCGGAGGTGCGTTCACTaGTGCTCCTGTCTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: WLVDLSEVKLFFKPLLSSRRCVH*CSCLQQ Trigger: TTGCTGGAGACAGGAGCATCAGTGAACGCACCTCCG...AGAGGAAAGAAGAGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR GCA 90 bp | CTTCCAACCTTTGCTGCCTTGTGGAGTGGAGTTTCTCCCAAGACATCCTGTTGGAAGAATGCAAGGGACTaGCCCAGTTCGGGAGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: LPTFAALWSGVSPKTSCWKNARD*PSSGEF Trigger: AAATTCTCCCGAACTGGGGCAGTCCCTTGCATTCTT...CCAACAGGATGTCTTGGGAGAAACTCCACTCCACAAGGCAGCAAAGGTTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| 3UTR CAA 72 bp | GACCAAGCAAGATCTTCAGCTGTCTGCCCATTCTTATaGCATACGCCAATCTGGACATCACTGGCCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DQARSSAVCPFL*HTPIWTSLATR Trigger: CCTTGTGGCCAGTGATGTCCAGATTGGCGTATGCAATAAGAATGGGCAGACAGCTGAAGATCTTGCTTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| CDS-3UTR TCA 90 bp | GTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTCTTCTTTCCTCTTGCCCACACTCTCCACAGTCCTaGAACTCCGCTTCTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VDLSEVKLFFKPLLSSCPHSPQS*NSASVS Trigger: TGAGACAGAAGCGGAGTTTCAGGACTGTGGAGAGTG...TGGGCAAGAGGAAAGAAGAGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR GCA 90 bp | TGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTCTTCTTTCCTCTGCACCTGTTTGCAGCTaGCAGAGAAGAAAGCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: WLVDLSEVKLFFKPLLSSAPVCS*QRRKHA Trigger: TGCGTGCTTTCTTCTCTGGCAGCTGCAAACAGGTGC...AGAGGAAAGAAGAGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR GCA 90 bp | GAGCCAAAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTGCTTCCAACCTTTGCTaGCTTGTGGAGTGGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPKQWLVDLSEVKLFFKPASNLC*LVEWSF Trigger: GAAACTCCACTCCACAAGGCAGCAAAGGTTGGAAGC...AGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR CCA 90 bp | GAGCCAAAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTTGCTGCCTTGTGGAGTaGAGTTTCTCCCAAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: EPKQWLVDLSEVKLFFKPCCLVE*SFSQDI Trigger: GATGTCTTGGGAGAAACTCCACTCCACAAGGCAGCA...AGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR TCA 90 bp | AAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTCTTCTTAGACATCCTGTTGGTTaGGGTCAGCACCTGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQWLVDLSEVKLFFKPLLRHPVG*GQHLFA Trigger: TGCAAACAGGTGCTGACCTCAACCAACAGGATGTCT...AAGAAGAGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR TCA 90 bp | GATGAGCCAAAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGTTCTGGAAAGCCATATaGCCAAGCAAGATCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DEPKQWLVDLSEVKLFFKFWKAI*PSKIFS Trigger: GCTGAAGATCTTGCTTGGTCATATGGCTTTCCAGAA...CTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR GCA 90 bp | GATGAGCCAAAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGTCTGCCCATTCTTATTaGATACGCCAATCTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: DEPKQWLVDLSEVKLFFKSAHSY*IRQSGH Trigger: ATGTCCAGATTGGCGTATGCAATAAGAATGGGCAGA...CTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR GCA 90 bp | GATGAGCCAAAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGAGATCTTCAGCTGTCTaGCCATTCTTATTGCATACG | + |
|
Preference number: 4 (lower is better) Translates to: DEPKQWLVDLSEVKLFFKRSSAV*PFLLHT Trigger: CGTATGCAATAAGAATGGGCAGACAGCTGAAGATCT...CTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTCTTCTTTCCTCTTCATTGTTAGAAACCTaGCACATTCTGGAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WLVDLSEVKLFFKPLLSSSLLET*HILESH Trigger: ATGGCTTTCCAGAATGTGCCAGGTTTCTAACAATGA...AGAGGAAAGAAGAGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR GCA 90 bp | GAGCCAAAGCAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTGATGATCTTGCCGTCTaGATACATTTAATCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EPKQWLVDLSEVKLFFKPDDLAV*IHLIIV Trigger: AACAATGATTAAATGTATGCAGACGGCAAGATCATC...AGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTGCTTTGGCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR CAA 90 bp | GTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTCTTCTTTCCTCTTGCCCACCAGGCTTCCAACCTTaGCTGCCTTGTGGAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VDLSEVKLFFKPLLSSCPPGFQP*LPCGVE Trigger: CTCCACTCCACAAGGCAGCAAAGGTTGGAAGCCTGG...TGGGCAAGAGGAAAGAAGAGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR CAA 90 bp | TGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTCTTCTTTCCTCTTCCCAAGACATCCTGTaGGTTGAGGTCAGCACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WLVDLSEVKLFFKPLLSSSQDIL*VEVSTC Trigger: ACAGGTGCTGACCTCAACCAACAGGATGTCTTGGGA...AGAGGAAAGAAGAGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR CAA 90 bp | CAATGGCTTGTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTCTTCTTTCCAAGACATCCTGTTGGTaGAGGTCAGCACCTGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: QWLVDLSEVKLFFKPLLSKTSCW*RSAPVC Trigger: GCAAACAGGTGCTGACCTCAACCAACAGGATGTCTT...GGAAAGAAGAGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTACAAGCCATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS-3UTR CAA 90 bp | GTAGATCTGTCTGAAGTGAAGCTCTTCTTCAAGCCTCTTCTTTCCTCTTGCCCAGTCTGCCCATTCTTATaGCATACGCCAATCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: VDLSEVKLFFKPLLSSCPVCPFL*HTPIWT Trigger: TGTCCAGATTGGCGTATGCAATAAGAATGGGCAGAC...TGGGCAAGAGGAAAGAAGAGGCTTGAAGAAGAGCTTCACTTCAGACAGATCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053558.10 |
||
| CDS CCA 72 bp | ATGACAAGTGTCCCCGGGAGTTCAGAGAGGCAACACTaGCCGGTAAGAATGCAAGGGACTGCCCCAGTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: MTSVPGSSERQH*PVRMQGTAPVR Trigger: CCGAACTGGGGCAGTCCCTTGCATTCTTACCGGCCAGTGTTGCCTCTCTGAACTCCCGGGGACACTTGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||
| CDS GCA 72 bp | AGAGAGGCAACACTGGCCGGTAAGAATGCAAGGGACTaGCCCAGTTCGGGAGAATTTAAAGCTCTCGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: REATLAGKNARD*PSSGEFKALGN Trigger: GTTCCCGAGAGCTTTAAATTCTCCCGAACTGGGGCAGTCCCTTGCATTCTTACCGGCCAGTGTTGCCTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153674.8 |
||