Pregenerated sensors for ANKRD36 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020481Ensembl transcript IDs: ENSMUST00000109855.8, ENSMUST00000109856.8, ENSMUST00000118112.9, ENSMUST00000137933.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR GCA 90 bp | CTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAGCAGGTTCACATCCTTaGTGCAGGGTGATGGTGATG | + |
Preference number: 2 (lower is better) Translates to: LTGWTPYPIPMVPGLGWAAGSHP*CRVMVM Trigger: CATCACCATCACCCTGCAGCAAGGATGTGAACCTGC...TGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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3UTR-3UTR GCA 90 bp | AGACACTATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATACCCATGGGGTTCACATCCTTGCTaGAGGGTGATGGTGATGCTG | + |
Preference number: 2 (lower is better) Translates to: RHYSCEDSQAGLPTQYPWGSHPC*RVMVML Trigger: CAGCATCACCATCACCCTGCAGCAAGGATGTGAACC...CCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAATAGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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3UTR GCA 72 bp | GGATGGGCAGAGGAGGTTGCAGGTTCACATCCTTGCTaGAGGGTGATGGTGATGCTGGTAGCAGCTGTGGCA | + |
Preference number: 3 (lower is better) Translates to: GWAEEVAGSHPC*RVMVMLVAAVA Trigger: TGCCACAGCTGCTACCAGCATCACCATCACCCTGCAGCAAGGATGTGAACCTGCAACCTCCTCTGCCCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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3UTR-3UTR CAA 90 bp | AGACACTATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCAGGTTCACATCCTaGCTGCAGGGTGATGGTGAT | + |
Preference number: 3 (lower is better) Translates to: RHYSCEDSQAGLPTQYPWCRFTS*LQGDGD Trigger: ATCACCATCACCCTGCAGCAAGGATGTGAACCTGCA...CCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAATAGTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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3UTR TCA 72 bp | AACACAAAACATCATACGCAGTTGTTTTTCCCACTCTaGGTAATTGCTGTTACAGTTAACTCATGCGTTGGT | + |
Preference number: 3 (lower is better) Translates to: NTKHHTQLFFPL*VIAVTVNSCVG Trigger: ACCAACGCATGAGTTAACTGTAACAGCAATTACTCAGAGTGGGAAAAACAACTGCGTATGATGTTTTGTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR GCA 90 bp | CTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAGGTTGGATCTGCAGGTaGGCTCTGGGCTTGTGGGCA | + |
Preference number: 4 (lower is better) Translates to: LTGWTPYPIPMVPGLGWAGWICR*ALGLWA Trigger: TGCCCACAAGCCCAGAGCGCACCTGCAGATCCAACC...TGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | CTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCACTCGCGGGGGCTCCATaGTTCCTTCTCACTGCCCTT | + |
Preference number: 4 (lower is better) Translates to: LTGWTPYPIPMVPGLGWALAGAP*FLLTAL Trigger: AAGGGCAGTGAGAAGGAAGCATGGAGCCCCCGCGAG...TGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR TCA 90 bp | TCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAGCTCTCCTGTCTCCAGTaGGAGACTCTCTCCCATGCG | + |
Preference number: 4 (lower is better) Translates to: SQAGLPTQYPWCQAWVGQLSCLQ*ETLSHA Trigger: CGCATGGGAGAGAGTCTCTCACTGGAGACAGGAGAG...CTGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | TCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAGCTGGGGCTTCAAAATTaGCCTTGCAGGGCAGTGGCT | + |
Preference number: 4 (lower is better) Translates to: SQAGLPTQYPWCQAWVGQLGLQN*PCRAVA Trigger: AGCCACTGCCCTGCAAGGGCAATTTTGAAGCCCCAG...CTGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | GGTTCACATCCTTGCTGCAGGGTGATGGTGATGCTGGTAGCAGCTGTGGCAGCTGGGGGTGAGTCTGCTTaGTCTCCTCCTCAGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: GSHPCCRVMVMLVAAVAAGGESA*SPPQAG Trigger: CCCTGCCTGAGGAGGAGAGCAAGCAGACTCACCCCC...AGCTGCCACAGCTGCTACCAGCATCACCATCACCCTGCAGCAAGGATGTGAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR CCA 90 bp | TCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAGCTCTCGCTTTCAAGGTaGACTTTCTCCCAGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: SQAGLPTQYPWCQAWVGQLSLSR*TFSQAR Trigger: CCTGGCCTGGGAGAAAGTCCACCTTGAAAGCGAGAG...CTGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR TCA 90 bp | CAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAGGACTCTTCAACCTTGAAGTaGCTTCTACAGCCACCCGGA | + |
Preference number: 4 (lower is better) Translates to: QAGLPTQYPWCQAWVGQDSSTLK*LLQPPG Trigger: TCCGGGTGGCTGTAGAAGTCACTTCAAGGTTGAAGA...GTCCTGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR TCA 90 bp | ATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGTCTCAAATTCCGGTGTaGCCACAGGCTCGCGGGGGC | + |
Preference number: 4 (lower is better) Translates to: IHVRTHRLDSLPNTHGARSQIPV*PQARGG Trigger: GCCCCCGCGAGCCTGTGGTCACACCGGAATTTGAGA...CCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | TCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAGCCTGTACATGTCGCTTaGAAGGGCAGAATCACCCCA | + |
Preference number: 4 (lower is better) Translates to: SQAGLPTQYPWCQAWVGQPVHVA*KGRITP Trigger: TGGGGTGATTCTGCCCTTGCAAGCGACATGTACAGG...CTGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | ATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCATCGGCGGCTGTGTaGTGCAGCTCAGGGCAGCTT | + |
Preference number: 4 (lower is better) Translates to: IHVRTHRLDSLPNTHGARPSAAV*CSSGQL Trigger: AAGCTGCCCTGAGCTGCAGCACACAGCCGCCGATGG...CCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR CCA 90 bp | TCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAGCACCTTCCTCCTGTCTaGGAGAGGTCTGCAGTGTTA | + |
Preference number: 4 (lower is better) Translates to: SQAGLPTQYPWCQAWVGQHLPPV*ERSAVL Trigger: TAACACTGCAGACCTCTCCCAGACAGGAGGAAGGTG...CTGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR CCA 90 bp | CTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAAGAGGACGAGGGAGATaGAAAGGCATTTCCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: LTGWTPYPIPMVPGLGWARGRGR*KGISKA Trigger: GGCCTTGGAAATGCCTTTCCATCTCCCTCGTCCTCT...TGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR CCA 90 bp | GGGATGGGCAGAGGAGGTTGCAGGTTCACATCCTTGCTGCAGGGTGATGGTGATGCCCTTGCAGGGCAGTaGCTTCAGGAACAGGTCCTG | + |
Preference number: 4 (lower is better) Translates to: GMGRGGCRFTSLLQGDGDALAGQ*LQEQVL Trigger: CAGGACCTGTTCCTGAAGCCACTGCCCTGCAAGGGC...ATCACCATCACCCTGCAGCAAGGATGTGAACCTGCAACCTCCTCTGCCCATCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR TCA 90 bp | TCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAGGGGAAACTTAGTAAGTaGCTGGCCACTGTAGTCCAC | + |
Preference number: 4 (lower is better) Translates to: SQAGLPTQYPWCQAWVGQGKLSK*LATVVH Trigger: GTGGACTACAGTGGCCAGTCACTTACTAAGTTTCCC...CTGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | TCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAGCTTCAAAATTGCCCTTaGAGGGCAGTGGCTTCAGGA | + |
Preference number: 4 (lower is better) Translates to: SQAGLPTQYPWCQAWVGQLQNCP*RAVASG Trigger: TCCTGAAGCCACTGCCCTGCAAGGGCAATTTTGAAG...CTGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR CCA 90 bp | GGGATGGGCAGAGGAGGTTGCAGGTTCACATCCTTGCTGCAGGGTGATGGTGATGAAAGCTCTAGTTGTTaGGCCACCAGGGGGCGCATC | + |
Preference number: 4 (lower is better) Translates to: GMGRGGCRFTSLLQGDGDESSSC*ATRGRI Trigger: GATGCGCCCCCTGGTGGCCCAACAACTAGAGCTTTC...ATCACCATCACCCTGCAGCAAGGATGTGAACCTGCAACCTCCTCTGCCCATCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | CTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCACTCCGAATCCACTTCTaGTGTTGCCTGTTCCATATC | + |
Preference number: 4 (lower is better) Translates to: LTGWTPYPIPMVPGLGWALRIHF*CCLFHI Trigger: GATATGGAACAGGCAACAGCAGAAGTGGATTCGGAG...TGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | GGGATGGGCAGAGGAGGTTGCAGGTTCACATCCTTGCTGCAGGGTGATGGTGATAGCTTCCCCGGGGTCTaGTTCACTCCTTCCTTCAAC | + |
Preference number: 4 (lower is better) Translates to: GMGRGGCRFTSLLQGDGDSFPGV*FTPSFN Trigger: GTTGAAGGAAGGAGTGAAGCAGACCCCGGGGAAGCT...ATCACCATCACCCTGCAGCAAGGATGTGAACCTGCAACCTCCTCTGCCCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR TCA 90 bp | GGGATGGGCAGAGGAGGTTGCAGGTTCACATCCTTGCTGCAGGGTGATGGTGATCTTTTGTTCCAGCTGTaGTGTCCCCTCCGAATCCAC | + |
Preference number: 4 (lower is better) Translates to: GMGRGGCRFTSLLQGDGDLLFQL*CPLRIH Trigger: GTGGATTCGGAGGGGACATCACAGCTGGAACAAAAG...ATCACCATCACCCTGCAGCAAGGATGTGAACCTGCAACCTCCTCTGCCCATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR TCA 90 bp | GGGATGGGCAGAGGAGGTTGCAGGTTCACATCCTTGCTGCAGGGTGATGGTGATCCCATGCGCTTTCACTaGAGGAACTTCTGGATGTCC | + |
Preference number: 4 (lower is better) Translates to: GMGRGGCRFTSLLQGDGDPMRFH*RNFWMS Trigger: GGACATCCAGAAGTTCCTTCAGTGAAAGCGCATGGG...ATCACCATCACCCTGCAGCAAGGATGTGAACCTGCAACCTCCTCTGCCCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | CTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAAACTCATGGCCTTCTTaGTTTTCACCCATACGTACT | + |
Preference number: 4 (lower is better) Translates to: LTGWTPYPIPMVPGLGWANSWPS*FSPIRT Trigger: AGTACGTATGGGTGAAAAGCAAGAAGGCCATGAGTT...TGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | GGTTCACATCCTTGCTGCAGGGTGATGGTGATGCTGGTAGCAGCTGTGGCAGCTAGAGACTCTCTCCCATaGGCTTTCACTGAAGGAACT | + |
Preference number: 4 (lower is better) Translates to: GSHPCCRVMVMLVAAVAARDSLP*AFTEGT Trigger: AGTTCCTTCAGTGAAAGCGCATGGGAGAGAGTCTCT...AGCTGCCACAGCTGCTACCAGCATCACCATCACCCTGCAGCAAGGATGTGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | ATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGTCCAGGTCCATACTCTaGTGCTTCCTGCTTACTTCT | + |
Preference number: 4 (lower is better) Translates to: IHVRTHRLDSLPNTHGARSRSIL*CFLLTS Trigger: AGAAGTAAGCAGGAAGCAGCAGAGTATGGACCTGGA...CCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR TCA 90 bp | AGACACTATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATACCCATGGCCTTTCTTTGGCGTTTaGAAGCCTGTTGGCATCACT | + |
Preference number: 4 (lower is better) Translates to: RHYSCEDSQAGLPTQYPWPFFGV*KPVGIT Trigger: AGTGATGCCAACAGGCTTTCAAACGCCAAAGAAAGG...CCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAATAGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | ATTTGTAGGACAGACACTATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCTTTGACTCTCTGTTCTaGCCTCTCCTGTCTCCAGTG | + |
Preference number: 4 (lower is better) Translates to: ICRTDTIHVRTHRLDSLPFDSLF*PLLSPV Trigger: CACTGGAGACAGGAGAGGGCAGAACAGAGAGTCAAA...GGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAATAGTGTCTGTCCTACAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR CCA 90 bp | ATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGACCCATACGTACTTCTaGGCACTTACCTTTTACCTT | + |
Preference number: 4 (lower is better) Translates to: IHVRTHRLDSLPNTHGARTHTYF*ALTFYL Trigger: AAGGTAAAAGGTAAGTGCCCAGAAGTACGTATGGGT...CCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR TCA 90 bp | ACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACTGGGCGCTGTGTGGCCTTaGTCAGAGCTGTGCTTTCCT | + |
Preference number: 4 (lower is better) Translates to: TNACRWVSSYRFNRTQLLGAVWP*SELCFP Trigger: AGGAAAGCACAGCTCTGATCAAGGCCACACAGCGCC...CAGTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CCA 90 bp | TGTAGGACAGACACTATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATTGGCTCTTGAACTCATaGCCTTCTTGCTTTTCACCC | + |
Preference number: 4 (lower is better) Translates to: CRTDTIHVRTHRLDSLPNWLLNS*PSCFSP Trigger: GGGTGAAAAGCAAGAAGGCCATGAGTTCAAGAGCCA...ATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAATAGTGTCTGTCCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR TCA 90 bp | ACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACTGCAGGCATGTACCCAGTaGGGTACCTGGGAGGTTCTT | + |
Preference number: 4 (lower is better) Translates to: TNACRWVSSYRFNRTQLLQACTQ*GTWEVL Trigger: AAGAACCTCCCAGGTACCTCACTGGGTACATGCCTG...CAGTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR TCA 90 bp | AGACACTATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATACCCATGGTTACTTCTTCAACCTTaGAGTGACTTCTACAGCCAC | + |
Preference number: 4 (lower is better) Translates to: RHYSCEDSQAGLPTQYPWLLLQP*SDFYSH Trigger: GTGGCTGTAGAAGTCACTTCAAGGTTGAAGAAGTAA...CCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAATAGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR TCA 90 bp | AGACACTATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATACCCATGGATTTTAGTGAGAAGGTaGCCATCCTTCAGTAGTAGC | + |
Preference number: 4 (lower is better) Translates to: RHYSCEDSQAGLPTQYPWILVRR*PSFSSS Trigger: GCTACTACTGAAGGATGGTCACCTTCTCACTAAAAT...CCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAATAGTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | ATTTGTAGGACAGACACTATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCGGAACAGGTCCTGTGTaGCTTTACTTTTCCTGTACA | + |
Preference number: 4 (lower is better) Translates to: ICRTDTIHVRTHRLDSLPGTGPV*LYFSCT Trigger: TGTACAGGAAAAGTAAAGGCACACAGGACCTGTTCC...GGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAATAGTGTCTGTCCTACAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR GCA 90 bp | ATTTGTAGGACAGACACTATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAGGTCCATACTCTGCTaGTTCCTGCTTACTTCTTCA | + |
Preference number: 4 (lower is better) Translates to: ICRTDTIHVRTHRLDSLPRSILC*FLLTSS Trigger: TGAAGAAGTAAGCAGGAAGCAGCAGAGTATGGACCT...GGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAATAGTGTCTGTCCTACAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR CCA 90 bp | AGACACTATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATACCCATGGAACTTCTGGATGTCCTaGTGCACATTCTTTGTCATC | + |
Preference number: 4 (lower is better) Translates to: RHYSCEDSQAGLPTQYPWNFWMS*CTFFVI Trigger: GATGACAAAGAATGTGCACCAGGACATCCAGAAGTT...CCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAATAGTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR TCA 90 bp | GTAACTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTTCGGTGTCTGCATTaGATGCCAGAAGCTTGGCGG | + |
Preference number: 4 (lower is better) Translates to: VTTNACRWVSSYRFNRTQLRCLH*MPEAWR Trigger: CCGCCAAGCTTCTGGCATTCAATGCAGACACCGAAG...CTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR TCA 90 bp | CTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACTTCCTTGAAGCGGGGTaGACATGGTACAAGGCCATC | + |
Preference number: 4 (lower is better) Translates to: LPMLADGFLLIGLIGLSYFLEAG*TWYKAI Trigger: GATGGCCTTGTACCATGTTCACCCCGCTTCAAGGAA...GTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CCA 90 bp | ACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACTGGCATTGGCGCCTTGCTaGAGAAGAAGGCTGATCATG | + |
Preference number: 4 (lower is better) Translates to: TNACRWVSSYRFNRTQLLALAPC*RRRLIM Trigger: CATGATCAGCCTTCTTCTCCAGCAAGGCGCCAATGC...CAGTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR GCA 90 bp | ATTTGTAGGACAGACACTATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCTTCTGGATGTCCTGGTaGACATTCTTTGTCATCTTT | + |
Preference number: 4 (lower is better) Translates to: ICRTDTIHVRTHRLDSLPFWMSW*TFFVIF Trigger: AAAGATGACAAAGAATGTGCACCAGGACATCCAGAA...GGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAATAGTGTCTGTCCTACAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS-3UTR CCA 90 bp | TGGCTTTCAGTAACTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATACACAGATCTCGTGCTaGCGCTGTGTGGCCTTGATC | + |
Preference number: 4 (lower is better) Translates to: WLSVTTNACRWVSSYRFNTQISC*RCVALI Trigger: GATCAAGGCCACACAGCGCCAGCACGAGATCTGTGT...ATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAGTTACTGAAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CCA 90 bp | GTAACTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGTTGTTAGCTCAGGTCTaGGACCAGGGCCTTGGGAAA | + |
Preference number: 4 (lower is better) Translates to: VTTNACRWVSSYRFNRTQLLAQV*DQGLGK Trigger: TTTCCCAAGGCCCTGGTCCCAGACCTGAGCTAACAA...CTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR GCA 90 bp | CTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACTCTTGGTTCTCAGCATaGCTAAAGCTCAGAAAGCCC | + |
Preference number: 4 (lower is better) Translates to: LPMLADGFLLIGLIGLSYSWFSA*LKLRKP Trigger: GGGCTTTCTGAGCTTTAGGCATGCTGAGAACCAAGA...GTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CCA 90 bp | ACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACTGACGCTTGCAGCTTTGTaGATCCTTTTCACAGGCATG | + |
Preference number: 4 (lower is better) Translates to: TNACRWVSSYRFNRTQLLTLAAL*ILFTGM Trigger: CATGCCTGTGAAAAGGATCCACAAAGCTGCAAGCGT...CAGTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR GCA 90 bp | TGGCTTTCAGTAACTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATCCCCAGCTCGTCAACTaGATCTGTGTTTTCCTCCAT | + |
Preference number: 4 (lower is better) Translates to: WLSVTTNACRWVSSYRFNPQLVN*ICVFLH Trigger: ATGGAGGAAAACACAGATGCAGTTGACGAGCTGGGG...ATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAGTTACTGAAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CCA 90 bp | GTAACTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGGTACAAGGCCATCCTTaGTATCAAAACTGTGTCTGG | + |
Preference number: 4 (lower is better) Translates to: VTTNACRWVSSYRFNRTQVQGHP*YQNCVW Trigger: CCAGACACAGTTTTGATACCAAGGATGGCCTTGTAC...CTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CCA 90 bp | CTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACTATCAAAACTGTGTCTaGCCTCTTTTGTTGTTAGCT | + |
Preference number: 4 (lower is better) Translates to: LPMLADGFLLIGLIGLSYYQNCV*PLLLLA Trigger: AGCTAACAACAAAAGAGGCCAGACACAGTTTTGATA...GTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CAA 90 bp | CTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCCTGGGTTGGGCAGCTGGGGCTTCAAAATaGCCCTTGCAGGGCAGTGGC | + |
Preference number: 5 (lower is better) Translates to: LTGWTPYPIPMVPGLGWAAGASK*PLQGSG Trigger: GCCACTGCCCTGCAAGGGCAATTTTGAAGCCCCAGC...TGCCCAACCCAGGCCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS GCA 90 bp | GGGTCATTGGCACCAGGCTCCTTGAAAGCCCTGGTCTGCAGCTGCTaGTGTGTCTGTATGTTTGCCTCCTTTCCCGGCAAGGCTGCACCC | + |
Preference number: 5 (lower is better) Translates to: GSLAPGSLKALVCSC*CVCMFASFPGKAAP Trigger: GGGTGCAGCCTTGCCGGGAAAGGAGGCAAACATACAGACACAGCAGCAGCTGCAGACCAGGGCTTTCAAGGAGCCTGGTGCCAATGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS GCA 90 bp | CTTTCCAGCCCATCGGCGGCTGTGTGCTGCAGCTCAGGGCAGCTTTaGTTTGACTCTCTGTTCTGCCCTCTCCTGTCTCCAGTGAGAGAC | + |
Preference number: 5 (lower is better) Translates to: LSSPSAAVCCSSGQL*FDSLFCPLLSPVRD Trigger: GTCTCTCACTGGAGACAGGAGAGGGCAGAACAGAGAGTCAAAGCAAAGCTGCCCTGAGCTGCAGCACACAGCCGCCGATGGGCTGGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS GCA 90 bp | TCAGGGTCATTGGCACCAGGCTCCTTGAAAGCCCTGGTCTGCAGCTaGTGCTGTGTCTGTATGTTTGCCTCCTTTCCCGGCAAGGCTGCA | + |
Preference number: 5 (lower is better) Translates to: SGSLAPGSLKALVCS*CCVCMFASFPGKAA Trigger: TGCAGCCTTGCCGGGAAAGGAGGCAAACATACAGACACAGCAGCAGCTGCAGACCAGGGCTTTCAAGGAGCCTGGTGCCAATGACCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS GCA 90 bp | CACTGGCGGTTCCCAAGGTGCGCGCTGGGGCTTCAAAATTGCCCTTaGAGGGCAGTGGCTTCAGGAACAGGTCCTGTGTGCCTTTACTTT | + |
Preference number: 5 (lower is better) Translates to: HWRFPRCALGLQNCP*RAVASGTGPVCLYF Trigger: AAAGTAAAGGCACACAGGACCTGTTCCTGAAGCCACTGCCCTGCAAGGGCAATTTTGAAGCCCCAGCGCGCACCTTGGGAACCGCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CCA 90 bp | GTGAGTTGTGTTCCAGAGCTTCAATGGGCTGTCAGAACCCCAGCCTaGGGCTGGCGCACGAGGCTCACTTCCATGGCTAGCTTCTTCCAT | + |
Preference number: 5 (lower is better) Translates to: VSCVPELQWAVRTPA*GWRTRLTSMASFFH Trigger: ATGGAAGAAGCTAGCCATGGAAGTGAGCCTCGTGCGCCAGCCCCAGGCTGGGGTTCTGACAGCCCATTGAAGCTCTGGAACACAACTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS-3UTR CAA 90 bp | ATTCATGTGAGGACTCACAGGCTGGACTCCCTACCCAATACCCATGGTGCCAGGCAGGGCAGCTTTGCTTaGACTCTCTGTTCTGCCCTC | + |
Preference number: 5 (lower is better) Translates to: IHVRTHRLDSLPNTHGARQGSFA*TLCSAL Trigger: GAGGGCAGAACAGAGAGTCAAAGCAAAGCTGCCCTG...CCTGGCACCATGGGTATTGGGTAGGGAGTCCAGCCTGTGAGTCCTCACATGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS TCA 90 bp | CTAGAAGAATCTTCACACAGATCTCGTGCTGGCGCTGTGTGGCCTTaGTCAGAGCTGTGCTTTCCTCTCGGTCTCGGGCTTCGATGTTGC | + |
Preference number: 5 (lower is better) Translates to: LEESSHRSRAGAVWP*SELCFPLGLGLRCC Trigger: GCAACATCGAAGCCCGAGACCGAGAGGAAAGCACAGCTCTGATCAAGGCCACACAGCGCCAGCACGAGATCTGTGTGAAGATTCTTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109855.8 ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS TCA 90 bp | CAAGGTGGACTTTCTCCCAGGCCAGGATCTCTTCCTCCAATATCCTaGACTCACTGTCGGATAGCCTGCCTCGCAGTTCTTCATCCGCGA | + |
Preference number: 5 (lower is better) Translates to: QGGLSPRPGSLPPIS*THCRIACLAVLHPR Trigger: TCGCGGATGAAGAACTGCGAGGCAGGCTATCCGACAGTGAGTTCAGGATATTGGAGGAAGAGATCCTGGCCTGGGAGAAAGTCCACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS TCA 90 bp | CATTCTCTCTTGATGGAAGGTCAGGGTCATTGGCACCAGGCTCCTTaGAAGCCCTGGTCTGCAGCTGCTGCTGTGTCTGTATGTTTGCCT | + |
Preference number: 5 (lower is better) Translates to: HSLLMEGQGHWHQAP*KPWSAAAAVSVCLP Trigger: AGGCAAACATACAGACACAGCAGCAGCTGCAGACCAGGGCTTTCAAGGAGCCTGGTGCCAATGACCCTGACCTTCCATCAAGAGAGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS-3UTR CAA 90 bp | GGGATGGGCAGAGGAGGTTGCAGGTTCACATCCTTGCTGCAGGGTGATGGTGATTCCTTTCTTTGGCGTTaGAAAGCCTGTTGGCATCAC | + |
Preference number: 5 (lower is better) Translates to: GMGRGGCRFTSLLQGDGDSFLWR*KACWHH Trigger: GTGATGCCAACAGGCTTTCAAACGCCAAAGAAAGGA...ATCACCATCACCCTGCAGCAAGGATGTGAACCTGCAACCTCCTCTGCCCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS TCA 90 bp | GGCTTCGATGTTGCAGTCATACCACAGCAAGAGGCTCACCATTTCTaGCTGGCCGTGAGCACAGGCGTAGTGAAGAGCAGTCCTTTTCTT | + |
Preference number: 5 (lower is better) Translates to: GFDVAVIPQQEAHHF*LAVSTGVVKSSPFL Trigger: AAGAAAAGGACTGCTCTTCACTACGCCTGTGCTCACGGCCAGTCAGAAATGGTGAGCCTCTTGCTGTGGTATGACTGCAACATCGAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109855.8 ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS TCA 90 bp | GTCTCAGGTCCTTTTCTAGGGCCTTCAGTTCTGCGATCACTGTCCTaGTTTCAGAGTGCTGAGTCCACTCCACACTCCCACCACATTGCT | + |
Preference number: 5 (lower is better) Translates to: VSGPFLGPSVLRSLS*FQSAESTPHSHHIA Trigger: AGCAATGTGGTGGGAGTGTGGAGTGGACTCAGCACTCTGAAATCAGGACAGTGATCGCAGAACTGAAGGCCCTAGAAAAGGACCTGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109856.8 |
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CDS GCA 90 bp | TCTGTATGTTTGCCTCCTTTCCCGGCAAGGCTGCACCCTGCTGTTTaGTCTCTAGAGGAACTGATCGGGATTCCATGTCTTCCCTCCATT | + |
Preference number: 5 (lower is better) Translates to: SVCLPPFPARLHPAV*SLEELIGIPCLPSI Trigger: AATGGAGGGAAGACATGGAATCCCGATCAGTTCCTCTAGAGAGCAAACAGCAGGGTGCAGCCTTGCCGGGAAAGGAGGCAAACATACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS TCA 90 bp | ATTGTAGGCCAGGGTAGTGGGGTCCGACGTCAGGTGAGTTTTTCCTaGGACATCAGGTGGTCGCTCTTCCTTGAGGTAAACATTAGCGTT | + |
Preference number: 5 (lower is better) Translates to: IVGQGSGVRRQVSFS*DIRWSLFLEVNISV Trigger: AACGCTAATGTTTACCTCAAGGAAGAGCGACCACCTGATGTCTCAGGAAAAACTCACCTGACGTCGGACCCCACTACCCTGGCCTACAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS TCA 90 bp | TCTAGGGCCTTCAGTTCTGCGATCACTGTCCTGATTTCAGAGTGCTaGGTCCACTCCACACTCCCACCACATTGCTCCTTTTCCCTTTGT | + |
Preference number: 5 (lower is better) Translates to: SRAFSSAITVLISEC*VHSTLPPHCSFSLC Trigger: ACAAAGGGAAAAGGAGCAATGTGGTGGGAGTGTGGAGTGGACTCAGCACTCTGAAATCAGGACAGTGATCGCAGAACTGAAGGCCCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109856.8 |
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CDS-3UTR CAA 90 bp | GGGATGGGCAGAGGAGGTTGCAGGTTCACATCCTTGCTGCAGGGTGATGGTGATTGGTTTCATAGTTTTTaGCGACTGGCTCTTGAACTC | + |
Preference number: 5 (lower is better) Translates to: GMGRGGCRFTSLLQGDGDWFHSF*RLALEL Trigger: GAGTTCAAGAGCCAGTCGCAAAAAACTATGAAACCA...ATCACCATCACCCTGCAGCAAGGATGTGAACCTGCAACCTCCTCTGCCCATCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137933.2 |
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CDS TCA 90 bp | CCCTCTCCTGTCTCCAGTGAGAGACTCTCTCCCATGCGCTTTCACTaGAGGAACTTCTGGATGTCCTGGTGCACATTCTTTGTCATCTTT | + |
Preference number: 5 (lower is better) Translates to: PSPVSSERLSPMRFH*RNFWMSWCTFFVIF Trigger: AAAGATGACAAAGAATGTGCACCAGGACATCCAGAAGTTCCTTCAGTGAAAGCGCATGGGAGAGAGTCTCTCACTGGAGACAGGAGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS TCA 90 bp | CGGCTGAGTATTCTCGCTGCTGTCAAGATTCTTTTGTTCCAGCTGTaGTGTCCCCTCCGAATCCACTTCTGCTGTTGCCTGTTCCATATC | + |
Preference number: 5 (lower is better) Translates to: RLSILAAVKILLFQL*CPLRIHFCCCLFHI Trigger: GATATGGAACAGGCAACAGCAGAAGTGGATTCGGAGGGGACATCACAGCTGGAACAAAAGAATCTTGACAGCAGCGAGAATACTCAGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CCA 90 bp | TCACACTTGTTTAGCAGATTCTCAGAGACACTCTCGCTTTCAAGGTaGACTTTCTCCCAGGCCAGGATCTCTTCCTCCAATATCCTGAAC | + |
Preference number: 5 (lower is better) Translates to: SHLFSRFSETLSLSR*TFSQARISSSNILN Trigger: GTTCAGGATATTGGAGGAAGAGATCCTGGCCTGGGAGAAAGTCCACCTTGAAAGCGAGAGTGTCTCTGAGAATCTGCTAAACAAGTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS-3UTR CAA 90 bp | GTAACTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGGAGCATCTTCTGCACTaGGGGTATGTCCCCCACGCT | + |
Preference number: 5 (lower is better) Translates to: VTTNACRWVSSYRFNRTQEHLLH*GYVPHA Trigger: AGCGTGGGGGACATACCCCAAGTGCAGAAGATGCTC...CTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CAA 90 bp | CTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACTCTGGGACCAGGGCCTaGGGAAAGCACTTGAAAGGT | + |
Preference number: 5 (lower is better) Translates to: LPMLADGFLLIGLIGLSYSGTRA*GKHLKG Trigger: ACCTTTCAAGTGCTTTCCCAAGGCCCTGGTCCCAGA...GTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS CCA 90 bp | CGCACCCAGCTTTTCAAGTGGAGCACTTCTTCTTCCAAGTTCTTCTaGTTCTCGAGCAGGTGTCTACACTTCTTCTGTTCTGTTTTGATC | + |
Preference number: 5 (lower is better) Translates to: RTQLFKWSTSSSKFF*FSSRCLHFFCSVLI Trigger: GATCAAAACAGAACAGAAGAAGTGTAGACACCTGCTCGAGAACCAGAAGAACTTGGAAGAAGAAGTGCTCCACTTGAAAAGCTGGGTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109856.8 |
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CDS-3UTR CAA 90 bp | CTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACGTATGTCCCCCACGCTaGCAGCTTTGTGGATCCTTT | + |
Preference number: 5 (lower is better) Translates to: LPMLADGFLLIGLIGLSYVCPPR*QLCGSF Trigger: AAAGGATCCACAAAGCTGCAAGCGTGGGGGACATAC...GTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CAA 90 bp | ACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACTGAGATGCATTGGCGCCTaGCTGGAGAAGAAGGCTGAT | + |
Preference number: 5 (lower is better) Translates to: TNACRWVSSYRFNRTQLLRCIGA*LEKKAD Trigger: ATCAGCCTTCTTCTCCAGCAAGGCGCCAATGCATCT...CAGTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CAA 90 bp | TGGCTTTCAGTAACTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATACTTCGGTGTCTGCATaGAATGCCAGAAGCTTGGCG | + |
Preference number: 5 (lower is better) Translates to: WLSVTTNACRWVSSYRFNTSVSA*NARSLA Trigger: CGCCAAGCTTCTGGCATTCAATGCAGACACCGAAGT...ATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAGTTACTGAAAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CAA 90 bp | CTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACCTTTTGTTGTCTTCCTaGAAGCGGGGTGAACATGGT | + |
Preference number: 5 (lower is better) Translates to: LPMLADGFLLIGLIGLSYLLLSS*KRGEHG Trigger: ACCATGTTCACCCCGCTTCAAGGAAGACAACAAAAG...GTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS CCA 90 bp | TCTTCAAATTCTAAAACACCTTCTCTCTCCAGCTTGACATCTGTCTaGAACTTGGCAGCTTCAGTTACTGGAAATTCTTTCATTTGTGGC | + |
Preference number: 5 (lower is better) Translates to: SSNSKTPSLSSLTSV*NLAASVTGNSFICG Trigger: GCCACAAATGAAAGAATTTCCAGTAACTGAAGCTGCCAAGTTCCAGACAGATGTCAAGCTGGAGAGAGAAGGTGTTTTAGAATTTGAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS-3UTR CAA 90 bp | CTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATAGGACTCAGCTACAAAAACAGCGTAACTTaGTGCAGTAGCTCCATAGAT | + |
Preference number: 5 (lower is better) Translates to: LPMLADGFLLIGLIGLSYKNSVT*CSSSID Trigger: ATCTATGGAGCTACTGCACAAAGTTACGCTGTTTTT...GTAGCTGAGTCCTATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CAA 90 bp | TGGCTTTCAGTAACTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATGCCTTGGGAAAGCACTaGAAAGGTTTCAAAAACAGC | + |
Preference number: 5 (lower is better) Translates to: WLSVTTNACRWVSSYRFNALGKH*KGFKNS Trigger: GCTGTTTTTGAAACCTTTCAAGTGCTTTCCCAAGGC...ATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAGTTACTGAAAGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS-3UTR CAA 90 bp | TGGCTTTCAGTAACTACCAATGCTTGCAGATGGGTTTCTTCTTATCGGTTTAATTTTTCCTCCATCCTTTaGTTGTCTTCCTTGAAGCGG | + |
Preference number: 5 (lower is better) Translates to: WLSVTTNACRWVSSYRFNFSSIL*LSSLKR Trigger: CCGCTTCAAGGAAGACAACAAAAGGATGGAGGAAAA...ATTAAACCGATAAGAAGAAACCCATCTGCAAGCATTGGTAGTTACTGAAAGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109855.8 |
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CDS TCA 90 bp | GGCAAAGCTTGTTTTAGAGTAGCATTCAGGACATGCATCTACTTCTaGATTGCCATCTGCACAAATTTCAAGTTCCTTTTCTTTGTGTTT | + |
Preference number: 5 (lower is better) Translates to: GKACFRVAFRTCIYF*IAICTNFKFLFFVF Trigger: AAACACAAAGAAAAGGAACTTGAAATTTGTGCAGATGGCAATTCAGAAGTAGATGCATGTCCTGAATGCTACTCTAAAACAAGCTTTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118112.9 |
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CDS GCA 90 bp | ACCTTAGAATTGAATAGGACTCAGTACTTTCAGCTGCTTCTAGATTaGTGTCTTGGCAAATTTCAAGTCCCTTTTCTTCAAATTCTAAAA | + |
Preference number: 5 (lower is better) Translates to: TLELNRTQYFQLLLD*CLGKFQVPFLQILK Trigger: TTTTAGAATTTGAAGAAAAGGGACTTGAAATTTGCCAAGACAGCAATCTAGAAGCAGCTGAAAGTACTGAGTCCTATTCAATTCTAAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS TCA 72 bp | GGCTGGGCCAGGCTACCCTCTTCTGCATGGCGGTGCTaGCGTCCAAGCATCCCTCCTCCAGGAGCCGTCGCT | + |
Preference number: 6 (lower is better) Translates to: GWARLPSSAWRC*RPSIPPPGAVA Trigger: AGCGACGGCTCCTGGAGGAGGGATGCTTGGACGTCAGCACCGCCATGCAGAAGAGGGTAGCCTGGCCCAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109856.8 |
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CDS CCA 72 bp | GCTCTCCTCCTCAGGCAGGGGCTGGATCAGCGTGGTTaGATCTGCAGGTGCGCTCTGGGCTTGTGGGCACGT | + |
Preference number: 6 (lower is better) Translates to: ALLLRQGLDQRG*ICRCALGLWAR Trigger: ACGTGCCCACAAGCCCAGAGCGCACCTGCAGATCCAACCACGCTGATCCAGCCCCTGCCTGAGGAGGAGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CCA 72 bp | GCTTGCTCTCCTCCTCAGGCAGGGGCTGGATCAGCGTaGTTGGATCTGCAGGTGCGCTCTGGGCTTGTGGGC | + |
Preference number: 6 (lower is better) Translates to: ACSPPQAGAGSA*LDLQVRSGLVG Trigger: GCCCACAAGCCCAGAGCGCACCTGCAGATCCAACCACGCTGATCCAGCCCCTGCCTGAGGAGGAGAGCAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CAA 72 bp | TGCTCTCCTCCTCAGGCAGGGGCTGGATCAGCGTGGTaGGATCTGCAGGTGCGCTCTGGGCTTGTGGGCACG | + |
Preference number: 6 (lower is better) Translates to: CSPPQAGAGSAW*DLQVRSGLVGT Trigger: CGTGCCCACAAGCCCAGAGCGCACCTGCAGATCCAACCACGCTGATCCAGCCCCTGCCTGAGGAGGAGAGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CCA 72 bp | GTTCCAGAGCTTCAATGGGCTGTCAGAACCCCAGCCTaGGGCTGGCGCACGAGGCTCACTTCCATGGCTAGC | + |
Preference number: 6 (lower is better) Translates to: VPELQWAVRTPA*GWRTRLTSMAS Trigger: GCTAGCCATGGAAGTGAGCCTCGTGCGCCAGCCCCAGGCTGGGGTTCTGACAGCCCATTGAAGCTCTGGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CAA 72 bp | CTGGCGGTTCCCAAGGTGCGCGCTGGGGCTTCAAAATaGCCCTTGCAGGGCAGTGGCTTCAGGAACAGGTCC | + |
Preference number: 6 (lower is better) Translates to: LAVPKVRAGASK*PLQGSGFRNRS Trigger: GGACCTGTTCCTGAAGCCACTGCCCTGCAAGGGCAATTTTGAAGCCCCAGCGCGCACCTTGGGAACCGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS TCA 72 bp | CAGCACCTGCTGGAGGGGACTTCTCAAATTCCGGTGTaGCCACAGGCTCGCGGGGGCTCCATGCTTCCTTCT | + |
Preference number: 6 (lower is better) Translates to: QHLLEGTSQIPV*PQARGGSMLPS Trigger: AGAAGGAAGCATGGAGCCCCCGCGAGCCTGTGGTCACACCGGAATTTGAGAAGTCCCCTCCAGCAGGTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS GCA 72 bp | TGGCGGTTCCCAAGGTGCGCGCTGGGGCTTCAAAATTaGCCTTGCAGGGCAGTGGCTTCAGGAACAGGTCCT | + |
Preference number: 6 (lower is better) Translates to: WRFPRCALGLQN*PCRAVASGTGP Trigger: AGGACCTGTTCCTGAAGCCACTGCCCTGCAAGGGCAATTTTGAAGCCCCAGCGCGCACCTTGGGAACCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CCA 72 bp | GAGCTTCAATGGGCTGTCAGAACCCCAGCCTGGGGCTaGCGCACGAGGCTCACTTCCATGGCTAGCTTCTTC | + |
Preference number: 6 (lower is better) Translates to: ELQWAVRTPAWG*RTRLTSMASFF Trigger: GAAGAAGCTAGCCATGGAAGTGAGCCTCGTGCGCCAGCCCCAGGCTGGGGTTCTGACAGCCCATTGAAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CAA 72 bp | GTTCCCAAGGTGCGCGCTGGGGCTTCAAAATTGCCCTaGCAGGGCAGTGGCTTCAGGAACAGGTCCTGTGTG | + |
Preference number: 6 (lower is better) Translates to: VPKVRAGASKLP*QGSGFRNRSCV Trigger: CACACAGGACCTGTTCCTGAAGCCACTGCCCTGCAAGGGCAATTTTGAAGCCCCAGCGCGCACCTTGGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS GCA 72 bp | GCACCAGGCTCCTTGAAAGCCCTGGTCTGCAGCTGCTaGTGTGTCTGTATGTTTGCCTCCTTTCCCGGCAAG | + |
Preference number: 6 (lower is better) Translates to: APGSLKALVCSC*CVCMFASFPGK Trigger: CTTGCCGGGAAAGGAGGCAAACATACAGACACAGCAGCAGCTGCAGACCAGGGCTTTCAAGGAGCCTGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS GCA 72 bp | TTGGCACCAGGCTCCTTGAAAGCCCTGGTCTGCAGCTaGTGCTGTGTCTGTATGTTTGCCTCCTTTCCCGGC | + |
Preference number: 6 (lower is better) Translates to: LAPGSLKALVCS*CCVCMFASFPG Trigger: GCCGGGAAAGGAGGCAAACATACAGACACAGCAGCAGCTGCAGACCAGGGCTTTCAAGGAGCCTGGTGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS GCA 72 bp | ACGGGACAAATGCTTTCCAGCCCATCGGCGGCTGTGTaGTGCAGCTCAGGGCAGCTTTGCTTTGACTCTCTG | + |
Preference number: 6 (lower is better) Translates to: TGQMLSSPSAAV*CSSGQLCFDSL Trigger: CAGAGAGTCAAAGCAAAGCTGCCCTGAGCTGCAGCACACAGCCGCCGATGGGCTGGAAAGCATTTGTCCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CCA 72 bp | TCTTTCATCGGAGTGAGTTGTGTTCCAGAGCTTCAATaGGCTGTCAGAACCCCAGCCTGGGGCTGGCGCACG | + |
Preference number: 6 (lower is better) Translates to: SFIGVSCVPELQ*AVRTPAWGWRT Trigger: CGTGCGCCAGCCCCAGGCTGGGGTTCTGACAGCCCATTGAAGCTCTGGAACACAACTCACTCCGATGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CAA 72 bp | GATCTGCAGGTGCGCTCTGGGCTTGTGGGCACGTCTTaGAGAGGTCTGGATTCGACGGCTGAGTATTCTCGC | + |
Preference number: 6 (lower is better) Translates to: DLQVRSGLVGTS*RGLDSTAEYSR Trigger: GCGAGAATACTCAGCCGTCGAATCCAGACCTCTCAAAGACGTGCCCACAAGCCCAGAGCGCACCTGCAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS TCA 72 bp | ATCTGCAGGTGCGCTCTGGGCTTGTGGGCACGTCTTTaGGAGGTCTGGATTCGACGGCTGAGTATTCTCGCT | + |
Preference number: 6 (lower is better) Translates to: ICRCALGLWARL*EVWIRRLSILA Trigger: AGCGAGAATACTCAGCCGTCGAATCCAGACCTCTCAAAGACGTGCCCACAAGCCCAGAGCGCACCTGCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS GCA 72 bp | TTTCCAAGGCCACCTTCCTCCTGTCTGGGAGAGGTCTaGAGTGTTACAGAGACCAGCGCAGCGCTCACATCT | + |
Preference number: 6 (lower is better) Translates to: FPRPPSSCLGEV*SVTETSAALTS Trigger: AGATGTGAGCGCTGCGCTGGTCTCTGTAACACTGCAGACCTCTCCCAGACAGGAGGAAGGTGGCCTTGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS GCA 72 bp | CCACAGGCTCGCGGGGGCTCCATGCTTCCTTCTCACTaGCCTTTGCGTCTTTTATACACAAGTCAGGAACAC | + |
Preference number: 6 (lower is better) Translates to: PQARGGSMLPSH*PLRLLYTSQEH Trigger: GTGTTCCTGACTTGTGTATAAAAGACGCAAAGGGCAGTGAGAAGGAAGCATGGAGCCCCCGCGAGCCTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CCA 72 bp | CCCCAGCCTGGGGCTGGCGCACGAGGCTCACTTCCATaGCTAGCTTCTTCCATTTCATTTACTTGGGATTTC | + |
Preference number: 6 (lower is better) Translates to: PQPGAGARGSLP*LASSISFTWDF Trigger: GAAATCCCAAGTAAATGAAATGGAAGAAGCTAGCCATGGAAGTGAGCCTCGTGCGCCAGCCCCAGGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CAA 72 bp | AGAAGCCGTGTCCATCTCTGGCCCCTGAGATCTTTCTaGAAGTTGTACAGGTGGAGGGCTCGTCTGCTTGGC | + |
Preference number: 6 (lower is better) Translates to: RSRVHLWPLRSF*KLYRWRARLLG Trigger: GCCAAGCAGACGAGCCCTCCACCTGTACAACTTCAAGAAAGATCTCAGGGGCCAGAGATGGACACGGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS TCA 72 bp | CAGGGTAGTGGGGTCCGACGTCAGGTGAGTTTTTCCTaGGACATCAGGTGGTCGCTCTTCCTTGAGGTAAAC | + |
Preference number: 6 (lower is better) Translates to: QGSGVRRQVSFS*DIRWSLFLEVN Trigger: GTTTACCTCAAGGAAGAGCGACCACCTGATGTCTCAGGAAAAACTCACCTGACGTCGGACCCCACTACCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS GCA 72 bp | TTGCCTCCTTTCCCGGCAAGGCTGCACCCTGCTGTTTaGTCTCTAGAGGAACTGATCGGGATTCCATGTCTT | + |
Preference number: 6 (lower is better) Translates to: LPPFPARLHPAV*SLEELIGIPCL Trigger: AAGACATGGAATCCCGATCAGTTCCTCTAGAGAGCAAACAGCAGGGTGCAGCCTTGCCGGGAAAGGAGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS GCA 72 bp | TGCCCTCTCCTGTCTCCAGTGAGAGACTCTCTCCCATaGGCTTTCACTGAAGGAACTTCTGGATGTCCTGGT | + |
Preference number: 6 (lower is better) Translates to: CPLLSPVRDSLP*AFTEGTSGCPG Trigger: ACCAGGACATCCAGAAGTTCCTTCAGTGAAAGCGCATGGGAGAGAGTCTCTCACTGGAGACAGGAGAGGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS GCA 72 bp | CTCGCGGGGGCTCCATGCTTCCTTCTCACTGCCCTTTaGGTCTTTTATACACAAGTCAGGAACACTCCTAGC | + |
Preference number: 6 (lower is better) Translates to: LAGAPCFLLTAL*VFYTQVRNTPS Trigger: GCTAGGAGTGTTCCTGACTTGTGTATAAAAGACGCAAAGGGCAGTGAGAAGGAAGCATGGAGCCCCCGCGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CAA 72 bp | TTTGCCTCCTTTCCCGGCAAGGCTGCACCCTGCTGTTaGCTCTCTAGAGGAACTGATCGGGATTCCATGTCT | + |
Preference number: 6 (lower is better) Translates to: FASFPGKAAPCC*LSRGTDRDSMS Trigger: AGACATGGAATCCCGATCAGTTCCTCTAGAGAGCAAACAGCAGGGTGCAGCCTTGCCGGGAAAGGAGGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CAA 72 bp | TCCTTAGCATTCTCTCTTGATGGAAGGTCAGGGTCATaGGCACCAGGCTCCTTGAAAGCCCTGGTCTGCAGC | + |
Preference number: 6 (lower is better) Translates to: SLAFSLDGRSGS*APGSLKALVCS Trigger: GCTGCAGACCAGGGCTTTCAAGGAGCCTGGTGCCAATGACCCTGACCTTCCATCAAGAGAGAATGCTAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CAA 72 bp | CGTGTCCATCTCTGGCCCCTGAGATCTTTCTTGAAGTaGTACAGGTGGAGGGCTCGTCTGCTTGGCTTGATG | + |
Preference number: 6 (lower is better) Translates to: RVHLWPLRSFLK*YRWRARLLGLM Trigger: CATCAAGCCAAGCAGACGAGCCCTCCACCTGTACAACTTCAAGAAAGATCTCAGGGGCCAGAGATGGACACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CAA 90 bp | TTCCTCATCAGAAGCCGTGTCCATCTCTGGCCCCTGAGATCTTTCTaGAAGTTGTACAGGTGGAGGGCTCGTCTGCTTGGCTTGATGCTG | + |
Preference number: 6 (lower is better) Translates to: FLIRSRVHLWPLRSF*KLYRWRARLLGLML Trigger: CAGCATCAAGCCAAGCAGACGAGCCCTCCACCTGTACAACTTCAAGAAAGATCTCAGGGGCCAGAGATGGACACGGCTTCTGATGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS TCA 72 bp | GCTTTGACTCTCTGTTCTGCCCTCTCCTGTCTCCAGTaGGAGACTCTCTCCCATGCGCTTTCACTGAAGGAA | + |
Preference number: 6 (lower is better) Translates to: ALTLCSALSCLQ*ETLSHALSLKE Trigger: TTCCTTCAGTGAAAGCGCATGGGAGAGAGTCTCTCACTGGAGACAGGAGAGGGCAGAACAGAGAGTCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS TCA 72 bp | AGCAGGTTCATCTTTCTCGTCAGCAGGAGACAGCTCTaGGACTTCCAGGTCCATACTCTGCTGCTTCCTGCT | + |
Preference number: 6 (lower is better) Translates to: SRFIFLVSRRQL*DFQVHTLLLPA Trigger: AGCAGGAAGCAGCAGAGTATGGACCTGGAAGTCTCAGAGCTGTCTCCTGCTGACGAGAAAGATGAACCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS TCA 72 bp | CCTTTTCTAGGGCCTTCAGTTCTGCGATCACTGTCCTaGTTTCAGAGTGCTGAGTCCACTCCACACTCCCAC | + |
Preference number: 6 (lower is better) Translates to: PFLGPSVLRSLS*FQSAESTPHSH Trigger: GTGGGAGTGTGGAGTGGACTCAGCACTCTGAAATCAGGACAGTGATCGCAGAACTGAAGGCCCTAGAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109856.8 |
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CDS CCA 72 bp | CCGTTCTCTAGAAGAATCTTCACACAGATCTCGTGCTaGCGCTGTGTGGCCTTGATCAGAGCTGTGCTTTCC | + |
Preference number: 6 (lower is better) Translates to: PFSRRIFTQISC*RCVALIRAVLS Trigger: GGAAAGCACAGCTCTGATCAAGGCCACACAGCGCCAGCACGAGATCTGTGTGAAGATTCTTCTAGAGAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109855.8 ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CCA 72 bp | TTCAACCTTGAAGTGACTTCTACAGCCACCCGGAAGTaGATCCTCCACGGGACAAATGCTTTCCAGCCCATC | + |
Preference number: 6 (lower is better) Translates to: FNLEVTSTATRK*ILHGTNAFQPI Trigger: GATGGGCTGGAAAGCATTTGTCCCGTGGAGGATCCACTTCCGGGTGGCTGTAGAAGTCACTTCAAGGTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CCA 72 bp | ACGTCAATATCCCCAAATTCGAGCATCTTCTGCACTTaGGGTATGTCCCCCACGCTTGCAGCTTTGTGGATC | + |
Preference number: 6 (lower is better) Translates to: TSISPNSSIFCT*GMSPTLAALWI Trigger: GATCCACAAAGCTGCAAGCGTGGGGGACATACCCCAAGTGCAGAAGATGCTCGAATTTGGGGATATTGACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109855.8 ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS TCA 72 bp | GTCTCCAGTGAGAGACTCTCTCCCATGCGCTTTCACTaGAGGAACTTCTGGATGTCCTGGTGCACATTCTTT | + |
Preference number: 6 (lower is better) Translates to: VSSERLSPMRFH*RNFWMSWCTFF Trigger: AAAGAATGTGCACCAGGACATCCAGAAGTTCCTTCAGTGAAAGCGCATGGGAGAGAGTCTCTCACTGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS TCA 72 bp | CCATACTCTGCTGCTTCCTGCTTACTTCTTCAACCTTaGAGTGACTTCTACAGCCACCCGGAAGTGGATCCT | + |
Preference number: 6 (lower is better) Translates to: PYSAASCLLLQP*SDFYSHPEVDP Trigger: AGGATCCACTTCCGGGTGGCTGTAGAAGTCACTTCAAGGTTGAAGAAGTAAGCAGGAAGCAGCAGAGTATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS TCA 72 bp | TTCAGTTCTGCGATCACTGTCCTGATTTCAGAGTGCTaGGTCCACTCCACACTCCCACCACATTGCTCCTTT | + |
Preference number: 6 (lower is better) Translates to: FSSAITVLISEC*VHSTLPPHCSF Trigger: AAAGGAGCAATGTGGTGGGAGTGTGGAGTGGACTCAGCACTCTGAAATCAGGACAGTGATCGCAGAACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109856.8 |
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CDS CCA 72 bp | AACTGTGTCTGGCCTCTTTTGTTGTTAGCTCAGGTCTaGGACCAGGGCCTTGGGAAAGCACTTGAAAGGTTT | + |
Preference number: 6 (lower is better) Translates to: NCVWPLLLLAQV*DQGLGKALERF Trigger: AAACCTTTCAAGTGCTTTCCCAAGGCCCTGGTCCCAGACCTGAGCTAACAACAAAAGAGGCCAGACACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109855.8 ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CAA 72 bp | CCAGCTGTGATGTCCCCTCCGAATCCACTTCTGCTGTaGCCTGTTCCATATCTAGATATCGCCCTTGTTGAT | + |
Preference number: 6 (lower is better) Translates to: PAVMSPPNPLLL*PVPYLDIALVD Trigger: ATCAACAAGGGCGATATCTAGATATGGAACAGGCAACAGCAGAAGTGGATTCGGAGGGGACATCACAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CAA 90 bp | ACGCCTTGGGTGCCAGAAGATGCCTCTCTAACCTATCCTCGTCCTTaGTATCAAGCTTATATTCATCCTTTCTTGCTGTGGGCTCTGGGT | + |
Preference number: 6 (lower is better) Translates to: TPWVPEDASLTYPRP*YQAYIHPFLLWALG Trigger: ACCCAGAGCCCACAGCAAGAAAGGATGAATATAAGCTTGATACAAAGGACGAGGATAGGTTAGAGAGGCATCTTCTGGCACCCAAGGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS TCA 72 bp | AGGGCAGAATCACCCCAACTTTTTACTTCGGTCACGTaGCTCCTTTCTTTGGCGTTTGAAAGCCTGTTGGCA | + |
Preference number: 6 (lower is better) Translates to: RAESPQLFTSVT*LLSLAFESLLA Trigger: TGCCAACAGGCTTTCAAACGCCAAAGAAAGGAGTCACGTGACCGAAGTAAAAAGTTGGGGTGATTCTGCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CCA 72 bp | ATGGTACAAGGCCATCCTTGGTATCAAAACTGTGTCTaGCCTCTTTTGTTGTTAGCTCAGGTCTGGGACCAG | + |
Preference number: 6 (lower is better) Translates to: MVQGHPWYQNCV*PLLLLAQVWDQ Trigger: CTGGTCCCAGACCTGAGCTAACAACAAAAGAGGCCAGACACAGTTTTGATACCAAGGATGGCCTTGTACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109855.8 ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CCA 72 bp | TTTAGCAGATTCTCAGAGACACTCTCGCTTTCAAGGTaGACTTTCTCCCAGGCCAGGATCTCTTCCTCCAAT | + |
Preference number: 6 (lower is better) Translates to: FSRFSETLSLSR*TFSQARISSSN Trigger: ATTGGAGGAAGAGATCCTGGCCTGGGAGAAAGTCCACCTTGAAAGCGAGAGTGTCTCTGAGAATCTGCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CAA 72 bp | GTTCCAGCTGTGATGTCCCCTCCGAATCCACTTCTGTaGCCTGTTCCATATCTAGATATCGCCCTTGTTGAT | + |
Preference number: 6 (lower is better) Translates to: VPAVMSPPNPLL*PVPYLDIALVD Trigger: ATCAACAAGGGCGATATCTAGATATGGAACAGGCAACAGAAGTGGATTCGGAGGGGACATCACAGCTGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109856.8 |
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CDS TCA 72 bp | AAAGCCTGTTGGCATCACTGGACTTCAGCATGTGTCTaGTATCTAACTGCCAGTCGGTGCGTTTTGGTTTCA | + |
Preference number: 6 (lower is better) Translates to: KACWHHWTSACV*YLTASRCVLVS Trigger: TGAAACCAAAACGCACCGACTGGCAGTTAGATATCAGACACATGCTGAAGTCCAGTGATGCCAACAGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CCA 72 bp | CCCAACTTTTTACTTCGGTCACGTGACTCCTTTCTTTaGCGTTTGAAAGCCTGTTGGCATCACTGGACTTCA | + |
Preference number: 6 (lower is better) Translates to: PNFLLRSRDSFL*RLKACWHHWTS Trigger: TGAAGTCCAGTGATGCCAACAGGCTTTCAAACGCCAAAGAAAGGAGTCACGTGACCGAAGTAAAAAGTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS CAA 72 bp | AGCTCGTCAACTGCATCTGTGTTTTCCTCCATCCTTTaGTTGTCTTCCTTGAAGCGGGGTGAACATGGTACA | + |
Preference number: 6 (lower is better) Translates to: SSSTASVFSSIL*LSSLKRGEHGT Trigger: TGTACCATGTTCACCCCGCTTCAAGGAAGACAACAAAAGGATGGAGGAAAACACAGATGCAGTTGACGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109855.8 ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CAA 72 bp | TCATCTTGTTTTAAGGGGAACCTCAGAGTGCAGAGCTaGTCCCATGCCACTTCTTTATGCTGTGACCAGGTT | + |
Preference number: 6 (lower is better) Translates to: SSCFKGNLRVQS*SHATSLCCDQV Trigger: AACCTGGTCACAGCATAAAGAAGTGGCATGGGACAAGCTCTGCACTCTGAGGTTCCCCTTAAAACAAGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109856.8 |
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CDS TCA 72 bp | GCATCATTGGTGTCTCTTAAATTTTCGATGTTGTTTTaGTCTCTTGCTTGGATCTCGCTCTCCCGCACCCAG | + |
Preference number: 6 (lower is better) Translates to: ASLVSLKFSMLF*SLAWISLSRTQ Trigger: CTGGGTGCGGGAGAGCGAGATCCAAGCAAGAGATCAAAACAACATCGAAAATTTAAGAGACACCAATGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109856.8 |
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CDS TCA 72 bp | GCTGTTGCCTGTTCCATATCTAGATATCGCCCTTGTTaGTCTGTGGCATCAGATATAATCCCCTCACACTTG | + |
Preference number: 6 (lower is better) Translates to: AVACSISRYRPC*SVASDIIPSHL Trigger: CAAGTGTGAGGGGATTATATCTGATGCCACAGATCAACAAGGGCGATATCTAGATATGGAACAGGCAACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS GCA 72 bp | CTCGTCCTTTGTATCAAGCTTATATTCATCCTTTCTTaGTGTGGGCTCTGGGTCACTAACATCAGGTTTGGC | + |
Preference number: 6 (lower is better) Translates to: LVLCIKLIFILS*CGLWVTNIRFG Trigger: GCCAAACCTGATGTTAGTGACCCAGAGCCCACAGCAAGAAAGGATGAATATAAGCTTGATACAAAGGACGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CAA 72 bp | TTTTTACTTCGGTCACGTGACTCCTTTCTTTGGCGTTaGAAAGCCTGTTGGCATCACTGGACTTCAGCATGT | + |
Preference number: 6 (lower is better) Translates to: FLLRSRDSFLWR*KACWHHWTSAC Trigger: ACATGCTGAAGTCCAGTGATGCCAACAGGCTTTCAAACGCCAAAGAAAGGAGTCACGTGACCGAAGTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 ENSMUST00000137933.2 |
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CDS TCA 72 bp | TCTGTTGCCTGTTCCATATCTAGATATCGCCCTTGTTaGTCTGTGGCATCAGATATAATCCCCTCACACTTG | + |
Preference number: 6 (lower is better) Translates to: SVACSISRYRPC*SVASDIIPSHL Trigger: CAAGTGTGAGGGGATTATATCTGATGCCACAGATCAACAAGGGCGATATCTAGATATGGAACAGGCAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109856.8 |
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CDS CCA 72 bp | CTTTTCAAGTGGAGCACTTCTTCTTCCAAGTTCTTCTaGTTCTCGAGCAGGTGTCTACACTTCTTCTGTTCT | + |
Preference number: 6 (lower is better) Translates to: LFKWSTSSSKFF*FSSRCLHFFCS Trigger: AGAACAGAAGAAGTGTAGACACCTGCTCGAGAACCAGAAGAACTTGGAAGAAGAAGTGCTCCACTTGAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109856.8 |
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CDS CAA 72 bp | ACACCTTCTCTCTCCAGCTTGACATCTGTCTGGAACTaGGCAGCTTCAGTTACTGGAAATTCTTTCATTTGT | + |
Preference number: 6 (lower is better) Translates to: TPSLSSLTSVWN*AASVTGNSFIC Trigger: ACAAATGAAAGAATTTCCAGTAACTGAAGCTGCCAAGTTCCAGACAGATGTCAAGCTGGAGAGAGAAGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |
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CDS CCA 72 bp | GTTAACATCTTCATAGATCTCGTCACCCTTCTGCGTTaGCTTGTTAATGACACACTGTACAGTTTCTTTACC | + |
Preference number: 6 (lower is better) Translates to: VNIFIDLVTLLR*LVNDTLYSFFT Trigger: GGTAAAGAAACTGTACAGTGTGTCATTAACAAGCCAACGCAGAAGGGTGACGAGATCTATGAAGATGTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109856.8 ENSMUST00000118112.9 |