Pregenerated sensors for ANKRD35 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038354Ensembl transcript IDs: ENSMUST00000048427.9, ENSMUST00000122960.6
Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCGAACTGCTCCGAGCGCCCGCGCATCTCGCCAGCCTGGCGCTCCTaGTCCGCCGCCCTAGCCGCCAGGTCCTCGCTGCGGCGACGTTCC | + |
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Preference number: 1 (lower is better) Translates to: SNCSERPRISPAWRS*SAALAARSSLRRRS Trigger: GGAACGTCGCCGCAGCGAGGACCTGGCGGCTAGGGCGGCGGAGCAGGAGCGCCAGGCTGGCGAGATGCGCGGGCGCTCGGAGCAGTTCGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | CCCCAAGCCTGTGCCTGGGCCACCAGCGAGCCTCGCGTCTTCTCGTaGTGGCGCAGGCTGGCTGCTTCCCGAGCTCTCAGCTCGGCCACT | + |
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Preference number: 1 (lower is better) Translates to: PQACAWATSEPRVFS*WRRLAASRALSSAT Trigger: AGTGGCCGAGCTGAGAGCTCGGGAAGCAGCCAGCCTGCGCCAGCACGAGAAGACGCGAGGCTCGCTGGTGGCCCAGGCACAGGCTTGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | CCTGGGCCACCAGCGAGCCTCGCGTCTTCTCGTGCTGGCGCAGGCTaGCTGCTTCCCGAGCTCTCAGCTCGGCCACTTCTTCCGTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: PGPPASLASSRAGAG*LLPELSARPLLPWL Trigger: AAGCCACGGAAGAAGTGGCCGAGCTGAGAGCTCGGGAAGCAGCCAGCCTGCGCCAGCACGAGAAGACGCGAGGCTCGCTGGTGGCCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | CAAGCCTGTGCCTGGGCCACCAGCGAGCCTCGCGTCTTCTCGTGCTaGCGCAGGCTGGCTGCTTCCCGAGCTCTCAGCTCGGCCACTTCT | + |
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Preference number: 1 (lower is better) Translates to: QACAWATSEPRVFSC*RRLAASRALSSATS Trigger: AGAAGTGGCCGAGCTGAGAGCTCGGGAAGCAGCCAGCCTGCGCCAGCACGAGAAGACGCGAGGCTCGCTGGTGGCCCAGGCACAGGCTTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | TACTTCTCCAGCACGACTTTGAGCTCCTGGCCCCAAGCCTGTGCCTaGGCCACCAGCGAGCCTCGCGTCTTCTCGTGCTGGCGCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: YFSSTTLSSWPQACA*ATSEPRVFSCWRRL Trigger: CAGCCTGCGCCAGCACGAGAAGACGCGAGGCTCGCTGGTGGCCCAGGCACAGGCTTGGGGCCAGGAGCTCAAAGTCGTGCTGGAGAAGTA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | TCGGGCTTGGGCACAAACTCCCGGTGTAGCCTCTGGGTCAAGGACTaGAGCTCTCCCTGCAAGCGTTGTCTCTCGCGCCCCAACTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: SGLGTNSRCSLWVKD*SSPCKRCLSRPNSP Trigger: GGGAGAGTTGGGGCGCGAGAGACAACGCTTGCAGGGAGAGCTGCAGTCCTTGACCCAGAGGCTACACCGGGAGTTTGTGCCCAAGCCCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | AGAGCGTTGTGTCCCAAACTGTCCACCGCTCCAGCGTCCGCTCCATaGCTCAGGAGCAGCTCGGCCACCTCAGCGCTGCCTTTCTCACAG | + |
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Preference number: 1 (lower is better) Translates to: RALCPKLSTAPASAP*LRSSSATSALPFSQ Trigger: CTGTGAGAAAGGCAGCGCTGAGGTGGCCGAGCTGCTCCTGAGCCATGGAGCGGACGCTGGAGCGGTGGACAGTTTGGGACACAACGCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | TGGACCTGTGCCTCGGGCTTGGGCACAAACTCCCGGTGTAGCCTCTaGGTCAAGGACTGCAGCTCTCCCTGCAAGCGTTGTCTCTCGCGC | + |
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Preference number: 1 (lower is better) Translates to: WTCASGLGTNSRCSL*VKDCSSPCKRCLSR Trigger: GCGCGAGAGACAACGCTTGCAGGGAGAGCTGCAGTCCTTGACCCAGAGGCTACACCGGGAGTTTGTGCCCAAGCCCGAGGCACAGGTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | CCACGCTCCTCCGCAACTGCTGTAGCTGGACCTGTGCCTCGGGCTTaGGCACAAACTCCCGGTGTAGCCTCTGGGTCAAGGACTGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: PRSSATAVAGPVPRA*AQTPGVASGSRTAA Trigger: AGCTGCAGTCCTTGACCCAGAGGCTACACCGGGAGTTTGTGCCCAAGCCCGAGGCACAGGTCCAGCTACAGCAGTTGCGGAGGAGCGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | TCCCGACAGGCTGTGTTGTACTTCTCCAGCACGACTTTGAGCTCCTaGCCCCAAGCCTGTGCCTGGGCCACCAGCGAGCCTCGCGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: SRQAVLYFSSTTLSS*PQACAWATSEPRVF Trigger: GAAGACGCGAGGCTCGCTGGTGGCCCAGGCACAGGCTTGGGGCCAGGAGCTCAAAGTCGTGCTGGAGAAGTACAACACAGCCTGTCGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR TCA 90 bp | CCCCTCAGCTGCTGGTTTTCCTCTTCCAACCGAGCCAGCACCCGTTaGGCCTCAAGGTGCCTATCCACCAGGGTGCTGATGCAGGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: PLSCWFSSSNRASTR*ASRCLSTRVLMQAC Trigger: GCAGGCCTGCATCAGCACCCTGGTGGATAGGCACCTTGAGGCTCAACGGGTGCTGGCTCGGTTGGAAGAGGAAAACCAGCAGCTGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | TCCATGGCCAGTTCCTCTGTCAACATCCCCACGCTCCTCCGCAACTaGTGTAGCTGGACCTGTGCCTCGGGCTTGGGCACAAACTCCCGG | + |
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Preference number: 1 (lower is better) Translates to: SMASSSVNIPTLLRN*CSWTCASGLGTNSR Trigger: CCGGGAGTTTGTGCCCAAGCCCGAGGCACAGGTCCAGCTACAGCAGTTGCGGAGGAGCGTGGGGATGTTGACAGAGGAACTGGCCATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | AGGTGGTTTGTCTTCTCTTTCAGGAGCTCAGCAGTTTTCTCGAACTaGTCCGAGCGCCCGCGCATCTCGCCAGCCTGGCGCTCCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: RWFVFSFRSSAVFSN*SERPRISPAWRSCS Trigger: GGAGCAGGAGCGCCAGGCTGGCGAGATGCGCGGGCGCTCGGAGCAGTTCGAGAAAACTGCTGAGCTCCTGAAAGAGAAGACAAACCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | GCCCACTGGTTCTCCCACTGTGCCTGCTGTTTCAGTCCCTGGAGCTaGGGTCCTCTCCTTCTGGCCAGCACACACCTGCTCAGTGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: AHWFSHCACCFSPWS*GPLLLASTHLLSVL Trigger: CAGAACACTGAGCAGGTGTGTGCTGGCCAGAAGGAGAGGACCCCAGCTCCAGGGACTGAAACAGCAGGCACAGTGGGAGAACCAGTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | GGCTATGCCCACTGGTTCTCCCACTGTGCCTGCTGTTTCAGTCCCTaGAGCTGGGGTCCTCTCCTTCTGGCCAGCACACACCTGCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: GYAHWFSHCACCFSP*SWGPLLLASTHLLS Trigger: ACTGAGCAGGTGTGTGCTGGCCAGAAGGAGAGGACCCCAGCTCCAGGGACTGAAACAGCAGGCACAGTGGGAGAACCAGTGGGCATAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | AGTTCCTCTGTCAACATCCCCACGCTCCTCCGCAACTGCTGTAGCTaGACCTGTGCCTCGGGCTTGGGCACAAACTCCCGGTGTAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: SSSVNIPTLLRNCCS*TCASGLGTNSRCSL Trigger: GAGGCTACACCGGGAGTTTGTGCCCAAGCCCGAGGCACAGGTCCAGCTACAGCAGTTGCGGAGGAGCGTGGGGATGTTGACAGAGGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | AGGTCTGGGGGTAGGCATTTCCACAGTCCTTGGAGGCCGCTAGTCTaGGAGGCCAGTAGCCTGCGCAGCTTATCTGTGGCCTCCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: RSGGRHFHSPWRPLV*EASSLRSLSVASFS Trigger: GGAGAAGGAGGCCACAGATAAGCTGCGCAGGCTACTGGCCTCCCAGACTAGCGGCCTCCAAGGACTGTGGAAATGCCTACCCCCAGACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | GAGGAGCTGATTCATGGCTATGCCCACTGGTTCTCCCACTGTGCCTaGTGTTTCAGTCCCTGGAGCTGGGGTCCTCTCCTTCTGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: EELIHGYAHWFSHCA*CFSPWSWGPLLLAS Trigger: GCTGGCCAGAAGGAGAGGACCCCAGCTCCAGGGACTGAAACAGCAGGCACAGTGGGAGAACCAGTGGGCATAGCCATGAATCAGCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | ACAAACTCCCGGTGTAGCCTCTGGGTCAAGGACTGCAGCTCTCCCTaGAAGCGTTGTCTCTCGCGCCCCAACTCTCCCAATTCCTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: TNSRCSLWVKDCSSP*KRCLSRPNSPNSSS Trigger: GCTGGAGGAATTGGGAGAGTTGGGGCGCGAGAGACAACGCTTGCAGGGAGAGCTGCAGTCCTTGACCCAGAGGCTACACCGGGAGTTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | AGGGGTGTGCGTCCATCATTATCCAGCACGTCCAGGAAGGCTTCGTaGTCACACAGCAGGAGGACACTTGAGGCGCAGCCAGAGGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: RGVRPSLSSTSRKAS*SHSRRTLEAQPEEA Trigger: AGCCTCCTCTGGCTGCGCCTCAAGTGTCCTCCTGCTGTGTGACCACGAAGCCTTCCTGGACGTGCTGGATAATGATGGACGCACACCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | TTAGAGCATCCCGGGACTGCCTTCGGGGCTCCGTCTCTGGACCCCTaGACAGGGACCTCAGGTTTCACATGCAGTCCCATCTTTGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LEHPGTAFGAPSLDP*TGTSGFTCSPIFAP Trigger: TGGAGCAAAGATGGGACTGCATGTGAAACCTGAGGTCCCTGTCCAGGGGTCCAGAGACGGAGCCCCGAAGGCAGTCCCGGGATGCTCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR TCA 90 bp | ATGAACTTTCCTCTGCTCCTCCTCGAACTTCCACCTCCACTCTTCTaGGCACCGCTCCTCCCCCTCCTCCTCCTGCTCTTCCTCAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: MNFPLLLLELPPPLF*APLLPLLLLLFLRL Trigger: GAGCCTGAGGAAGAGCAGGAGGAGGAGGGGGAGGAGCGGTGCTCAGAAGAGTGGAGGTGGAAGTTCGAGGAGGAGCAGAGGAAAGTTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | CAGCGTCCGCTCCATGGCTCAGGAGCAGCTCGGCCACCTCAGCGCTaGCTTTCTCACAGGCCAGGATCAAAGCTGATTTGTCATCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: QRPLHGSGAARPPQR*LSHRPGSKLICHPC Trigger: ACAAGGATGACAAATCAGCTTTGATCCTGGCCTGTGAGAAAGGCAGCGCTGAGGTGGCCGAGCTGCTCCTGAGCCATGGAGCGGACGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | TTCTGGCCAGCACACACCTGCTCAGTGTTCTGGAGGCCAAGGTTCTaGCCCCCATTGGTGTTTGGTTGCTGTCCTGTGGCTTTCCCGGTG | + |
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Preference number: 1 (lower is better) Translates to: FWPAHTCSVFWRPRF*PPLVFGCCPVAFPV Trigger: CACCGGGAAAGCCACAGGACAGCAACCAAACACCAATGGGGGGCAGAACCTTGGCCTCCAGAACACTGAGCAGGTGTGTGCTGGCCAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | GTAGGAGGAGCTGATTCATGGCTATGCCCACTGGTTCTCCCACTGTaGCTGCTGTTTCAGTCCCTGGAGCTGGGGTCCTCTCCTTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: VGGADSWLCPLVLPL*LLFQSLELGSSPSG Trigger: GCCAGAAGGAGAGGACCCCAGCTCCAGGGACTGAAACAGCAGGCACAGTGGGAGAACCAGTGGGCATAGCCATGAATCAGCTCCTCCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | GCTCGGCCACTTCTTCCGTGGCTTGGTAGAGCAGTTGTTTCAGCTTaGAAATCTCCTGGCTCTTCCCACTCATCGTGGCCTGCACGGCCC | + |
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Preference number: 1 (lower is better) Translates to: ARPLLPWLGRAVVSA*KSPGSSHSSWPARP Trigger: GGGCCGTGCAGGCCACGATGAGTGGGAAGAGCCAGGAGATTTGCAAGCTGAAACAACTGCTCTACCAAGCCACGGAAGAAGTGGCCGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR TCA 90 bp | GCTTGCTCTCGAATCTGCTCCTCTAGGCTTGAGAAGGCTGCAGCGTaGGCCTTGCACTCATCTGTCTTTCGCACGAGCTCCTGCTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: ACSRICSSRLEKAAA*ALHSSVFRTSSCSS Trigger: GCTGGAGCAGGAGCTCGTGCGAAAGACAGATGAGTGCAAGGCTCACGCTGCAGCCTTCTCAAGCCTAGAGGAGCAGATTCGAGAGCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | GCAGGCTGGCTGCTTCCCGAGCTCTCAGCTCGGCCACTTCTTCCGTaGCTTGGTAGAGCAGTTGTTTCAGCTTGCAAATCTCCTGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: AGWLLPELSARPLLP*LGRAVVSACKSPGS Trigger: AGAGCCAGGAGATTTGCAAGCTGAAACAACTGCTCTACCAAGCCACGGAAGAAGTGGCCGAGCTGAGAGCTCGGGAAGCAGCCAGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR TCA 90 bp | TCTCGCCACACTGCAGCCAGCTCTTCCCTTAGCTGTAGGAGGAGCTaGTTCATGGCTATGCCCACTGGTTCTCCCACTGTGCCTGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: SRHTAASSSLSCRRS*FMAMPTGSPTVPAV Trigger: AACAGCAGGCACAGTGGGAGAACCAGTGGGCATAGCCATGAATCAGCTCCTCCTACAGCTAAGGGAAGAGCTGGCTGCAGTGTGGCGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | CAGCCAGCTCTTCCCTTAGCTGTAGGAGGAGCTGATTCATGGCTATaGCCACTGGTTCTCCCACTGTGCCTGCTGTTTCAGTCCCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: QPALPLAVGGADSWL*PLVLPLCLLFQSLE Trigger: CTCCAGGGACTGAAACAGCAGGCACAGTGGGAGAACCAGTGGGCATAGCCATGAATCAGCTCCTCCTACAGCTAAGGGAAGAGCTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | ATCTCTTCGTGGTTCTTCTGGGAGTCCTGCAGCTGTAGGGCGAGGTaGGCATTCTCGCCCCGGACTTCTAGAACTTCTTCCGAAAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: ISSWFFWESCSCRAR*AFSPRTSRTSSESC Trigger: GCAGCTTTCGGAAGAAGTTCTAGAAGTCCGGGGCGAGAATGCCCACCTCGCCCTACAGCTGCAGGACTCCCAGAAGAACCACGAAGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR TCA 90 bp | GGGGTAGGAGGGAGGCTGGGAGATGGTTGGATTTTGAGTGAAGGGTaGGAAAGCCTGAGGTCCGTAAAGTTCCGCCCTAGGGAACAACTG | + |
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Preference number: 1 (lower is better) Translates to: GVGGRLGDGWILSEG*ESLRSVKFRPREQL Trigger: CAGTTGTTCCCTAGGGCGGAACTTTACGGACCTCAGGCTTTCTCACCCTTCACTCAAAATCCAACCATCTCCCAGCCTCCCTCCTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| 3UTR GCA 90 bp | CTCGAATCTGCTCCTCTAGGCTTGAGAAGGCTGCAGCGTGAGCCTTaGACTCATCTGTCTTTCGCACGAGCTCCTGCTCCAGCTGATGAA | + |
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Preference number: 1 (lower is better) Translates to: LESAPLGLRRLQREP*THLSFARAPAPADE Trigger: TTCATCAGCTGGAGCAGGAGCTCGTGCGAAAGACAGATGAGTGCAAGGCTCACGCTGCAGCCTTCTCAAGCCTAGAGGAGCAGATTCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR TCA 90 bp | TTAACTCGGGCACCTCTCTGCAACAGCTGTGAGCAGATAGCTGCATaGCCACCCAGCGATGCAATCATCAGGGGTGTGCGTCCATCATTA | + |
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Preference number: 1 (lower is better) Translates to: LTRAPLCNSCEQIAA*PPSDAIIRGVRPSL Trigger: TAATGATGGACGCACACCCCTGATGATTGCATCGCTGGGTGGTCATGCAGCTATCTGCTCACAGCTGTTGCAGAGAGGTGCCCGAGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR TCA 90 bp | ATCCTTGTCTGTGACATTAACTCGGGCACCTCTCTGCAACAGCTGTaGGCAGATAGCTGCATGACCACCCAGCGATGCAATCATCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: ILVCDINSGTSLQQL*ADSCMTTQRCNHQG Trigger: CCCCTGATGATTGCATCGCTGGGTGGTCATGCAGCTATCTGCTCACAGCTGTTGCAGAGAGGTGCCCGAGTTAATGTCACAGACAAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | GGCAGTGCTTCCGTCCTCGTTCTTGCTGTTGATATCAGCCCCATTTaGAAGCAGTATTGTCAGACACTCTGTCAGGCCTTTGGAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: GSASVLVLAVDISPI*KQYCQTLCQAFGGC Trigger: GCAGCCTCCAAAGGCCTGACAGAGTGTCTGACAATACTGCTTGCAAATGGGGCTGATATCAACAGCAAGAACGAGGACGGAAGCACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | AGCGTTGTCTCTCGCGCCCCAACTCTCCCAATTCCTCCAGCAAGTTaGTATTGCTCAGTCTCAAAGCTGACACCTCTTTCTCCAGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: SVVSRAPTLPIPPAS*YCSVSKLTPLSPAV Trigger: GACAGCTGGAGAAAGAGGTGTCAGCTTTGAGACTGAGCAATAGCAACTTGCTGGAGGAATTGGGAGAGTTGGGGCGCGAGAGACAACGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | AGGTGGGCATTCTCGCCCCGGACTTCTAGAACTTCTTCCGAAAGCTaGTCGAGCTTCTTCAGCAACTCCTTGATCTTGGCTTCCTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: RWAFSPRTSRTSSES*SSFFSNSLILASLS Trigger: GGACAAGGAAGCCAAGATCAAGGAGTTGCTGAAGAAGCTCGAGCAGCTTTCGGAAGAAGTTCTAGAAGTCCGGGGCGAGAATGCCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTaGCCACAAAGGGGTAGGAGGGAGGCTGGGAGATGGTTGGATTTT | + |
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Preference number: 1 (lower is better) Translates to: DVLKGLLVFPNWKEG*PQRGRREAGRWLDF Trigger: AAAATCCAACCATCTCCCAGCCTCCCTCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| 3UTR GCA 90 bp | CTCTTGGGAACTAATGTTGGGTTTATTGTAGCCAGTGCCTTCTGCTaGTTCTTCAGCTCTTGGATCCGCTCAGCCAGCAGGTTCAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: LLGTNVGFIVASAFC*FFSSWIRSASRFRG Trigger: TCCCCTGAACCTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCAGCAGAAGGCACTGGCTACAATAAACCCAACATTAGTTCCCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR GCA 90 bp | GCTCTCTTGGGAACTAATGTTGGGTTTATTGTAGCCAGTGCCTTCTaGTGCTTCTTCAGCTCTTGGATCCGCTCAGCCAGCAGGTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: ALLGTNVGFIVASAF*CFFSSWIRSASRFR Trigger: CCTGAACCTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCAGCAGAAGGCACTGGCTACAATAAACCCAACATTAGTTCCCAAGAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CCA 90 bp | AACTCCTTGATCTTGGCTTCCTTGTCCCGGCAAGCCCCGATGAGGTaGTTTGTCTTCTCTTTCAGGAGCTCAGCAGTTTTCTCGAACTGC | + |
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Preference number: 1 (lower is better) Translates to: NSLILASLSRQAPMR*FVFSFRSSAVFSNC Trigger: GCAGTTCGAGAAAACTGCTGAGCTCCTGAAAGAGAAGACAAACCACCTCATCGGGGCTTGCCGGGACAAGGAAGCCAAGATCAAGGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR-3UTR CCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCCAGCGTCCGCTCCATaGCTCAGGAGCAGCTCGGCC | + |
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Preference number: 2 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQPASAP*LRSSSA Trigger: GGCCGAGCTGCTCCTGAGCCATGGAGCGGACGCTGG...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CAA 90 bp | CCCACGCTCCTCCGCAACTGCTGTAGCTGGACCTGTGCCTCGGGCTaGGGCACAAACTCCCGGTGTAGCCTCTGGGTCAAGGACTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: PTLLRNCCSWTCASG*GTNSRCSLWVKDCS Trigger: GCTGCAGTCCTTGACCCAGAGGCTACACCGGGAGTTTGTGCCCAAGCCCGAGGCACAGGTCCAGCTACAGCAGTTGCGGAGGAGCGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR-3UTR GCA 90 bp | GGCGCAGGCTGGCTGCTTCCCGAGCTCTCAGCTCGGCCACTTCTTCCGTGGCTTTCCAGGGCGGCCACTTaGGGGGATGCTGTAACCTTG | + |
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Preference number: 2 (lower is better) Translates to: GAGWLLPELSARPLLPWLSRAAT*GDAVTL Trigger: CAAGGTTACAGCATCCCCGCAAGTGGCCGCCCTGGA...AAGCCACGGAAGAAGTGGCCGAGCTGAGAGCTCGGGAAGCAGCCAGCCTGCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR-3UTR TCA 90 bp | GGCGCAGGCTGGCTGCTTCCCGAGCTCTCAGCTCGGCCACTTCTTCCGTGGCTTGAGAAGGCTGCAGCGTaGGCCTTGCACTCATCTGTC | + |
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Preference number: 2 (lower is better) Translates to: GAGWLLPELSARPLLPWLEKAAA*ALHSSV Trigger: GACAGATGAGTGCAAGGCTCACGCTGCAGCCTTCTC...AAGCCACGGAAGAAGTGGCCGAGCTGAGAGCTCGGGAAGCAGCCAGCCTGCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGGATCCCCTCAGCTGCTGGTTTTCCTCTTCCAACCGAGCCAGCACCCGTTGCCACCTCCACTCTTCTaGGCACCGCTCCTCCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: QGSPQLLVFLFQPSQHPLPPPLF*APLLPL Trigger: GAGGGGGAGGAGCGGTGCTCAGAAGAGTGGAGGTGG...CAACGGGTGCTGGCTCGGTTGGAAGAGGAAAACCAGCAGCTGAGGGGATCCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CAA 90 bp | TCCCCTCAGCTGCTGGTTTTCCTCTTCCAACCGAGCCAGCACCCGTaGAGCCTCAAGGTGCCTATCCACCAGGGTGCTGATGCAGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SPQLLVFLFQPSQHP*SLKVPIHQGADAGL Trigger: CAGGCCTGCATCAGCACCCTGGTGGATAGGCACCTTGAGGCTCAACGGGTGCTGGCTCGGTTGGAAGAGGAAAACCAGCAGCTGAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR TCA 90 bp | TACCATCTCCCTCAGGCCGGAGACCAGGGCCTTGATTTCCTGGAGCTCCCGGTTAGTTCGTGTGTCCTGTaGAGCCCCACCCACAGCACC | + |
|
Preference number: 2 (lower is better) Translates to: YHLPQAGDQGLDFLELPVSSCVL*SPTHST Trigger: GGTGCTGTGGGTGGGGCTTCACAGGACACACGAACT...AACCGGGAGCTCCAGGAAATCAAGGCCCTGGTCTCCGGCCTGAGGGAGATGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTCCGTCTCTGGACCCCTGGACAGGGACCTCAGGTTTCACATGCAGTCCCATCCAGGAAGGCTTCGTaGTCACACAGCAGGAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: GLRLWTPGQGPQVSHAVPSRKAS*SHSRRT Trigger: TGTCCTCCTGCTGTGTGACCACGAAGCCTTCCTGGA...TGGGACTGCATGTGAAACCTGAGGTCCCTGTCCAGGGGTCCAGAGACGGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCCTGCTCTTTAGAGCATCCCGGGACTGCCTTCGGGGCTCCGTCTCTGGACACCTGCTCAGTGTTCTaGAGGCCAAGGTTCTGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: SSCSLEHPGTAFGAPSLDTCSVF*RPRFCP Trigger: GGGGCAGAACCTTGGCCTCCAGAACACTGAGCAGGT...GTCCAGAGACGGAGCCCCGAAGGCAGTCCCGGGATGCTCTAAAGAGCAGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR-3UTR CCA 90 bp | GCCAGTTCCTCTGTCAACATCCCCACGCTCCTCCGCAACTGCTGTAGCTGGACCCTGTGGCTTTCCCGGTaGTTTCTGAACTTGGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: ASSSVNIPTLLRNCCSWTLWLSR*FLNLGP Trigger: AGGGCCCAAGTTCAGAAACCACCGGGAAAGCCACAG...GGTCCAGCTACAGCAGTTGCGGAGGAGCGTGGGGATGTTGACAGAGGAACTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CAA 90 bp | GCTGGCTGCTTCCCGAGCTCTCAGCTCGGCCACTTCTTCCGTGGCTaGGTAGAGCAGTTGTTTCAGCTTGCAAATCTCCTGGCTCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: AGCFPSSQLGHFFRG*VEQLFQLANLLALP Trigger: GGGAAGAGCCAGGAGATTTGCAAGCTGAAACAACTGCTCTACCAAGCCACGGAAGAAGTGGCCGAGCTGAGAGCTCGGGAAGCAGCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CAA 90 bp | TCCGCCACAGTGTCCCGCAATCGAGTCATTTCCCGACAGGCTGTGTaGTACTTCTCCAGCACGACTTTGAGCTCCTGGCCCCAAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SATVSRNRVISRQAV*YFSSTTLSSWPQAC Trigger: ACAGGCTTGGGGCCAGGAGCTCAAAGTCGTGCTGGAGAAGTACAACACAGCCTGTCGGGAAATGACTCGATTGCGGGACACTGTGGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR GCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGAATGACCACCCAGCGATaGAATCATCAGGGGTGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: APLVGNHRPPTCPPQLDRMTTQR*NHQGCA Trigger: CGCACACCCCTGATGATTGCATCGCTGGGTGGTCAT...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR GCA 90 bp | GGAGATGGCCTAGTTCTTGCGCTTGCTCTCGAATCTGCTCCTCTAGGCTTGAGACGGCCACCTCAGCGCTaGCTTTCTCACAGGCCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GDGLVLALALESAPLGLRRPPQR*LSHRPG Trigger: TCCTGGCCTGTGAGAAAGGCAGCGCTGAGGTGGCCG...TCTCAAGCCTAGAGGAGCAGATTCGAGAGCAAGCGCAAGAACTAGGCCATCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGTTCCTCTGTCAACATCCCCACGCTCCTCCGCAACTGCTGTAGCTGGACCCTGCAGCGTGAGCCTTaGACTCATCTGTCTTTCGCA | + |
|
Preference number: 2 (lower is better) Translates to: ASSSVNIPTLLRNCCSWTLQREP*THLSFA Trigger: TGCGAAAGACAGATGAGTGCAAGGCTCACGCTGCAG...GGTCCAGCTACAGCAGTTGCGGAGGAGCGTGGGGATGTTGACAGAGGAACTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGAGCTGACAGGAGATGGTaGCCAAATGAAGGGCAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: APLVGNHRPPTCPPQLDRADRRW*PNEGQC Trigger: GCACTGCCCTTCATTTGGCCACCATCTCCTGTCAGC...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGATCCCCTCAGCTGCTGGTTTTCCTCTTCCAACCGAGCCAGCACCCGTTGGTGGCTGACAGGAGATaGTGGCCAAATGAAGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: QGSPQLLVFLFQPSQHPLVADRR*WPNEGQ Trigger: CTGCCCTTCATTTGGCCACCATCTCCTGTCAGCCAC...CAACGGGTGCTGGCTCGGTTGGAAGAGGAAAACCAGCAGCTGAGGGGATCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CAA 90 bp | CCGAGCTCTCAGCTCGGCCACTTCTTCCGTGGCTTGGTAGAGCAGTaGTTTCAGCTTGCAAATCTCCTGGCTCTTCCCACTCATCGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: PSSQLGHFFRGLVEQ*FQLANLLALPTHRG Trigger: GCCACGATGAGTGGGAAGAGCCAGGAGATTTGCAAGCTGAAACAACTGCTCTACCAAGCCACGGAAGAAGTGGCCGAGCTGAGAGCTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR TCA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGACTGCTCACAAGGTCCTaGCTCCCCCTAGTGACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGLLTRS*LPLVTH Trigger: GTGGGTCACTAGGGGGAGTCAGGACCTTGTGAGCAG...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGCTGCAGCGTGAGCCTTGCACTCATCTGTCTTTCGCACGAGCTCCTGCTCTTCACACACTGTGGCTaGCAGGAGATGGTGGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: EGCSVSLALICLSHELLLFTHCG*QEMVAK Trigger: TTTGGCCACCATCTCCTGTCAGCCACAGTGTGTGAA...GAGCAGGAGCTCGTGCGAAAGACAGATGAGTGCAAGGCTCACGCTGCAGCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR GCA 90 bp | TCCCCTCAGCTGCTGGTTTTCCTCTTCCAACCGAGCCAGCACCCGTTGAGCCTCAGATGGCCTAGTTCTTaGGCTTGCTCTCGAATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SPQLLVFLFQPSQHPLSLRWPSS*ACSRIC Trigger: GCAGATTCGAGAGCAAGCGCAAGAACTAGGCCATCT...GAGGCTCAACGGGTGCTGGCTCGGTTGGAAGAGGAAAACCAGCAGCTGAGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGCCAGTGCCTTCTGCTGCTTCTTCAGCTCTTGGATCCGCTCAGCCAGCAGAGGGCCTTGATTTCCTaGAGCTCCCGGTTCTTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: CSQCLLLLLQLLDPLSQQRALIS*SSRFLH Trigger: GTGCAAGAACCGGGAGCTCCAGGAAATCAAGGCCCT...CTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCAGCAGAAGGCACTGGCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CCA 90 bp | GAGCATCCCGGGACTGCCTTCGGGGCTCCGTCTCTGGACCCCTGGACAGGGACCATTCTTCAGCTCTCTTaGGAACTAATGTTGGGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: EHPGTAFGAPSLDPWTGTILQLS*ELMLGL Trigger: TAAACCCAACATTAGTTCCCAAGAGAGCTGAAGAAT...GGTCCCTGTCCAGGGGTCCAGAGACGGAGCCCCGAAGGCAGTCCCGGGATGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGATCCCCTCAGCTGCTGGTTTTCCTCTTCCAACCGAGCCAGCACCCGTTGTTGGTTGCTGTCCTGTaGCTTTCCCGGTGGTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QGSPQLLVFLFQPSQHPLLVAVL*LSRWFL Trigger: CAGAAACCACCGGGAAAGCCACAGGACAGCAACCAA...CAACGGGTGCTGGCTCGGTTGGAAGAGGAAAACCAGCAGCTGAGGGGATCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR CAA 90 bp | TGGACCCCTGGACAGGGACCTCAGGTTTCACATGCAGTCCCATCTTaGCTCCATCTAACCTTACCAGCACCCTCTCAAGCCTGGCTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: WTPGQGPQVSHAVPS*LHLTLPAPSQAWLP Trigger: TGGAAGCCAGGCTTGAGAGGGTGCTGGTAAGGTTAGATGGAGCAAAGATGGGACTGCATGTGAAACCTGAGGTCCCTGTCCAGGGGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR TCA 90 bp | TTGATCTTGGCTTCCTTGTCCCGGCAAGCCCCGATGAGGTGGTTTGTCTTCTCTGAGATGGTGGCCAAATaGAGGGCAGTGCTTCCGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LILASLSRQAPMRWFVFSEMVAK*RAVLPS Trigger: GGACGGAAGCACTGCCCTTCATTTGGCCACCATCTC...AGAGAAGACAAACCACCTCATCGGGGCTTGCCGGGACAAGGAAGCCAAGATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR GCA 90 bp | TGTAGCCAGTGCCTTCTGCTGCTTCTTCAGCTCTTGGATCCGCTCAGCCAGCAGACTCGGGCACCTCTCTaGAACAGCTGTGAGCAGATA | + |
|
Preference number: 2 (lower is better) Translates to: CSQCLLLLLQLLDPLSQQTRAPL*NSCEQI Trigger: TATCTGCTCACAGCTGTTGCAGAGAGGTGCCCGAGT...CTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCAGCAGAAGGCACTGGCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CAA 90 bp | GATGGCCTAGTTCTTGCGCTTGCTCTCGAATCTGCTCCTCTAGGCTaGAGAAGGCTGCAGCGTGAGCCTTGCACTCATCTGTCTTTCGCA | + |
|
Preference number: 2 (lower is better) Translates to: DGLVLALALESAPLG*RRLQREPCTHLSFA Trigger: TGCGAAAGACAGATGAGTGCAAGGCTCACGCTGCAGCCTTCTCAAGCCTAGAGGAGCAGATTCGAGAGCAAGCGCAAGAACTAGGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR GCA 90 bp | TGTAGCCAGTGCCTTCTGCTGCTTCTTCAGCTCTTGGATCCGCTCAGCCAGCAGGCTTGCTCTCGAATCTaGTCCTCTAGGCTTGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: CSQCLLLLLQLLDPLSQQACSRI*SSRLEK Trigger: CTTCTCAAGCCTAGAGGAGCAGATTCGAGAGCAAGC...CTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCAGCAGAAGGCACTGGCTACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGATTCATGGCTATGCCCACTGGTTCTCCCACTGTGCCTGCTGTTTCAGTCCGCCAGTGCCTTCTGCTaGTTCTTCAGCTCTTGGATC | + |
|
Preference number: 2 (lower is better) Translates to: ADSWLCPLVLPLCLLFQSASAFC*FFSSWI Trigger: GATCCAAGAGCTGAAGAAGCAGCAGAAGGCACTGGC...GGACTGAAACAGCAGGCACAGTGGGAGAACCAGTGGGCATAGCCATGAATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR GCA 90 bp | TTGATCTTGGCTTCCTTGTCCCGGCAAGCCCCGATGAGGTGGTTTGTCTTCTCTTTCTCCCACTGTGCCTaGTGTTTCAGTCCCTGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LILASLSRQAPMRWFVFSFSHCA*CFSPWS Trigger: GCTCCAGGGACTGAAACAGCAGGCACAGTGGGAGAA...AGAGAAGACAAACCACCTCATCGGGGCTTGCCGGGACAAGGAAGCCAAGATCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR-3UTR CCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGACTTGTCTTTCCAAACTaGAAAGAGGGCTGCCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: APLVGNHRPPTCPPQLDRLVFPN*KEGCPQ Trigger: TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAG...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAGATGGCCTAGTTCTTGCGCTTGCTCTCGAATCTGCTCCTCTAGGCTTGAGATCTCTGCAACAGCTGTaGGCAGATAGCTGCATGACC | + |
|
Preference number: 2 (lower is better) Translates to: GDGLVLALALESAPLGLRSLQQL*ADSCMT Trigger: GGTCATGCAGCTATCTGCTCACAGCTGTTGCAGAGA...TCTCAAGCCTAGAGGAGCAGATTCGAGAGCAAGCGCAAGAACTAGGCCATCTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CAA 90 bp | AAGCGTTGTCTCTCGCGCCCCAACTCTCCCAATTCCTCCAGCAAGTaGCTATTGCTCAGTCTCAAAGCTGACACCTCTTTCTCCAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KRCLSRPNSPNSSSK*LLLSLKADTSFSSC Trigger: ACAGCTGGAGAAAGAGGTGTCAGCTTTGAGACTGAGCAATAGCAACTTGCTGGAGGAATTGGGAGAGTTGGGGCGCGAGAGACAACGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGATTCATGGCTATGCCCACTGGTTCTCCCACTGTGCCTGCTGTTTCAGTCCCAATCATCAGGGGTGTaGGTCCATCATTATCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: ADSWLCPLVLPLCLLFQSQSSGV*VHHYPA Trigger: TGCTGGATAATGATGGACGCACACCCCTGATGATTG...GGACTGAAACAGCAGGCACAGTGGGAGAACCAGTGGGCATAGCCATGAATCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR GCA 90 bp | TGTAGCCAGTGCCTTCTGCTGCTTCTTCAGCTCTTGGATCCGCTCAGCCAGCAGTGGACTGCGATTTTCTaGATCCACAGCATCTTCATT | + |
|
Preference number: 2 (lower is better) Translates to: CSQCLLLLLQLLDPLSQQWTAIF*IHSIFI Trigger: AATGAAGATGCTGTGGATGCAGAAAATCGCAGTCCA...CTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCAGCAGAAGGCACTGGCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR GCA 90 bp | AGCGTTGTCTCTCGCGCCCCAACTCTCCCAATTCCTCCAGCAAGTTGCTATTGCGTTTATTGTAGCCAGTaGCTTCTGCTGCTTCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SVVSRAPTLPIPPASCYCVYCSQ*LLLLLQ Trigger: CTGAAGAAGCAGCAGAAGGCACTGGCTACAATAAAC...GCAATAGCAACTTGCTGGAGGAATTGGGAGAGTTGGGGCGCGAGAGACAACGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
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| 3UTR-3UTR CCA 90 bp | CATGATGGATCTCAGCCGGGGCTAATTCTTCAGCTCTCTTGGGAACTAATGTTGTGCTTCTTCAGCTCTTaGATCCGCTCAGCCAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: HDGSQPGLILQLSWELMLCFFSS*IRSASR Trigger: CCTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCA...CAACATTAGTTCCCAAGAGAGCTGAAGAATTAGCCCCGGCTGAGATCCATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CCA 90 bp | TTGATCTTGGCTTCCTTGTCCCGGCAAGCCCCGATGAGGTGGTTTGTCTTCTCTCTAAGGGCTCTCCTCTaGTTCCAAGAGCCTTCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: LILASLSRQAPMRWFVFSLRALL*FQEPSF Trigger: AAAAGAAGGCTCTTGGAACCAGAGGAGAGCCCTTAG...AGAGAAGACAAACCACCTCATCGGGGCTTGCCGGGACAAGGAAGCCAAGATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR TCA 90 bp | TTCGAAGTAGGATGTTGTAGACGTCTTGTTCCATGTAGCCCCGAGCAGCATTCAAAATGCCTTTATCCCTaGGGGCACACAGTGAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: FEVGCCRRLVPCSPEQHSKCLYP*GHTVSL Trigger: CAGGCTCACTGTGTGCCCTCAGGGATAAAGGCATTT...TGAATGCTGCTCGGGGCTACATGGAACAAGACGTCTACAACATCCTACTTCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CCA 90 bp | TTCGAAGTAGGATGTTGTAGACGTCTTGTTCCATGTAGCCCCGAGCAGCATTCACGGCCACTTCTTCCGTaGCTTGGTAGAGCAGTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: FEVGCCRRLVPCSPEQHSRPLLP*LGRAVV Trigger: AACAACTGCTCTACCAAGCCACGGAAGAAGTGGCCG...TGAATGCTGCTCGGGGCTACATGGAACAAGACGTCTACAACATCCTACTTCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR TCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAATTTTGAGTGAAGGGTaGGAAAGCCTGAGGTCCGTA | + |
|
Preference number: 2 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQILSEG*ESLRSV Trigger: TACGGACCTCAGGCTTTCTCACCCTTCACTCAAAAT...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGATCTTGGCTTCCTTGTCCCGGCAAGCCCCGATGAGGTGGTTTGTCTTCTCTGATATCAGCCCCATTTaGAAGCAGTATTGTCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LILASLSRQAPMRWFVFSDISPI*KQYCQT Trigger: TGTCTGACAATACTGCTTGCAAATGGGGCTGATATC...AGAGAAGACAAACCACCTCATCGGGGCTTGCCGGGACAAGGAAGCCAAGATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR TCA 90 bp | TTTCAGTTAACTTTACTTCAATGCTCTATGCCCTACAGGACTCCCCAGTGTCAGAAATGCCTTTATCCCTaGGGGCACACAGTGAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: FQLTLLQCSMPYRTPQCQKCLYP*GHTVSL Trigger: CAGGCTCACTGTGTGCCCTCAGGGATAAAGGCATTT...CTGACACTGGGGAGTCCTGTAGGGCATAGAGCATTGAAGTAAAGTTAACTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR-3UTR GCA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGAACTGGAAAGAGGGCTaGCCACAAAGGGGTAGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: PPQLDRASLFPKRRNSKMNWKEG*PQRGRR Trigger: CCTCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTT...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR-3UTR TCA 90 bp | GCCCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGGTTGGATTTTGAGTaGAGGGTGAGAAAGCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: AHHSLIEPHYSLKEEIQRWLDFE*RVRKPE Trigger: CTCAGGCTTTCTCACCCTTCACTCAAAATCCAACCA...TCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR CCA 72 bp | TCGAACTGCTCCGAGCGCCCGCGCATCTCGCCAGCCTaGCGCTCCTGCTCCGCCGCCCTAGCCGCCAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SNCSERPRISPA*RSCSAALAARS Trigger: GGACCTGGCGGCTAGGGCGGCGGAGCAGGAGCGCCAGGCTGGCGAGATGCGCGGGCGCTCGGAGCAGTTCGA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | TGTGCCTGGGCCACCAGCGAGCCTCGCGTCTTCTCGTaGTGGCGCAGGCTGGCTGCTTCCCGAGCTCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CAWATSEPRVFS*WRRLAASRALS Trigger: GCTGAGAGCTCGGGAAGCAGCCAGCCTGCGCCAGCACGAGAAGACGCGAGGCTCGCTGGTGGCCCAGGCACA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CCA 72 bp | TGTCCCAAACTGTCCACCGCTCCAGCGTCCGCTCCATaGCTCAGGAGCAGCTCGGCCACCTCAGCGCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CPKLSTAPASAP*LRSSSATSALP Trigger: AGGCAGCGCTGAGGTGGCCGAGCTGCTCCTGAGCCATGGAGCGGACGCTGGAGCGGTGGACAGTTTGGGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CCA 72 bp | CCAGCGAGCCTCGCGTCTTCTCGTGCTGGCGCAGGCTaGCTGCTTCCCGAGCTCTCAGCTCGGCCACTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: PASLASSRAGAG*LLPELSARPLL Trigger: AAGAAGTGGCCGAGCTGAGAGCTCGGGAAGCAGCCAGCCTGCGCCAGCACGAGAAGACGCGAGGCTCGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CCA 72 bp | GTCAACATCCCCACGCTCCTCCGCAACTGCTGTAGCTaGACCTGTGCCTCGGGCTTGGGCACAAACTCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: VNIPTLLRNCCS*TCASGLGTNSR Trigger: CCGGGAGTTTGTGCCCAAGCCCGAGGCACAGGTCCAGCTACAGCAGTTGCGGAGGAGCGTGGGGATGTTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | TCCCAGATCTTCCTCCAGGGCGGCCACTTGCGGGGATaGTGTAACCTTGAGGGAGGCCTCTGGTTCCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SQIFLQGGHLRG*CNLEGGLWFPT Trigger: TGTGGGGAACCAGAGGCCTCCCTCAAGGTTACAGCATCCCCGCAAGTGGCCGCCCTGGAGGAAGATCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | GTCTTCTCTTTCAGGAGCTCAGCAGTTTTCTCGAACTaGTCCGAGCGCCCGCGCATCTCGCCAGCCTGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: VFSFRSSAVFSN*SERPRISPAWR Trigger: GCGCCAGGCTGGCGAGATGCGCGGGCGCTCGGAGCAGTTCGAGAAAACTGCTGAGCTCCTGAAAGAGAAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CCA 72 bp | GCCTCGGGCTTGGGCACAAACTCCCGGTGTAGCCTCTaGGTCAAGGACTGCAGCTCTCCCTGCAAGCGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ASGLGTNSRCSL*VKDCSSPCKRC Trigger: ACAACGCTTGCAGGGAGAGCTGCAGTCCTTGACCCAGAGGCTACACCGGGAGTTTGTGCCCAAGCCCGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CCA 72 bp | TCCGCAACTGCTGTAGCTGGACCTGTGCCTCGGGCTTaGGCACAAACTCCCGGTGTAGCCTCTGGGTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SATAVAGPVPRA*AQTPGVASGSR Trigger: CCTTGACCCAGAGGCTACACCGGGAGTTTGTGCCCAAGCCCGAGGCACAGGTCCAGCTACAGCAGTTGCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | CGGTGTAGCCTCTGGGTCAAGGACTGCAGCTCTCCCTaGAAGCGTTGTCTCTCGCGCCCCAACTCTCCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: RCSLWVKDCSSP*KRCLSRPNSPN Trigger: ATTGGGAGAGTTGGGGCGCGAGAGACAACGCTTGCAGGGAGAGCTGCAGTCCTTGACCCAGAGGCTACACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | AGTTCCTCTGTCAACATCCCCACGCTCCTCCGCAACTaGTGTAGCTGGACCTGTGCCTCGGGCTTGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SSSVNIPTLLRN*CSWTCASGLGT Trigger: TGTGCCCAAGCCCGAGGCACAGGTCCAGCTACAGCAGTTGCGGAGGAGCGTGGGGATGTTGACAGAGGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CCA 72 bp | CCTGTGGCTTTCCCGGTGGTTTCTGAACTTGGGCCCTaGGGCAGCCCCTGCTCTGGTTGGGACTTTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PVAFPVVSELGP*GSPCSGWDFLC Trigger: ACACAGAAAGTCCCAACCAGAGCAGGGGCTGCCCCAGGGCCCAAGTTCAGAAACCACCGGGAAAGCCACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGTTCCTCTGTCAACATCCCCACGCTCCTCCGCAACTGCTGTAGCTGGACCCACTCTGTCAGGCCTTaGGAGGCTGCCAGATGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ASSSVNIPTLLRNCCSWTHSVRP*EAARWN Trigger: GTTCCATCTGGCAGCCTCCAAAGGCCTGACAGAGTG...GGTCCAGCTACAGCAGTTGCGGAGGAGCGTGGGGATGTTGACAGAGGAACTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | TCTAGCATTCCCAGATCTTCCTCCAGGGCGGCCACTTaGGGGGATGCTGTAACCTTGAGGGAGGCCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSIPRSSSRAAT*GDAVTLREASG Trigger: ACCAGAGGCCTCCCTCAAGGTTACAGCATCCCCGCAAGTGGCCGCCCTGGAGGAAGATCTGGGAATGCTAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR TCA 72 bp | TGCTGGTTTTCCTCTTCCAACCGAGCCAGCACCCGTTaGGCCTCAAGGTGCCTATCCACCAGGGTGCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: CWFSSSNRASTR*ASRCLSTRVLM Trigger: CATCAGCACCCTGGTGGATAGGCACCTTGAGGCTCAACGGGTGCTGGCTCGGTTGGAAGAGGAAAACCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | CTCCATGGCTCAGGAGCAGCTCGGCCACCTCAGCGCTaGCTTTCTCACAGGCCAGGATCAAAGCTGATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHGSGAARPPQR*LSHRPGSKLIC Trigger: ACAAATCAGCTTTGATCCTGGCCTGTGAGAAAGGCAGCGCTGAGGTGGCCGAGCTGCTCCTGAGCCATGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | GCTCCTCTAGGCTTGAGAAGGCTGCAGCGTGAGCCTTaGACTCATCTGTCTTTCGCACGAGCTCCTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: APLGLRRLQREP*THLSFARAPAP Trigger: TGGAGCAGGAGCTCGTGCGAAAGACAGATGAGTGCAAGGCTCACGCTGCAGCCTTCTCAAGCCTAGAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | GCACACACCTGCTCAGTGTTCTGGAGGCCAAGGTTCTaGCCCCCATTGGTGTTTGGTTGCTGTCCTGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AHTCSVFWRPRF*PPLVFGCCPVA Trigger: AGCCACAGGACAGCAACCAAACACCAATGGGGGGCAGAACCTTGGCCTCCAGAACACTGAGCAGGTGTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CCA 72 bp | CGTCCATCATTATCCAGCACGTCCAGGAAGGCTTCGTaGTCACACAGCAGGAGGACACTTGAGGCGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RPSLSSTSRKAS*SHSRRTLEAQP Trigger: TGGCTGCGCCTCAAGTGTCCTCCTGCTGTGTGACCACGAAGCCTTCCTGGACGTGCTGGATAATGATGGACG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTTGTCTCTCGCGCCCCAACTCTCCCAATTCCTCCAGCAAGTTGCTATTGCCTGCTTCTTCAGCTCTaGGATCCGCTCAGCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVVSRAPTLPIPPASCYCLLLQL*DPLSQQ Trigger: CTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCAG...GCAATAGCAACTTGCTGGAGGAATTGGGAGAGTTGGGGCGCGAGAGACAACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR TCA 72 bp | CGAATCTGCTCCTCTAGGCTTGAGAAGGCTGCAGCGTaGGCCTTGCACTCATCTGTCTTTCGCACGAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RICSSRLEKAAA*ALHSSVFRTSS Trigger: GGAGCTCGTGCGAAAGACAGATGAGTGCAAGGCTCACGCTGCAGCCTTCTCAAGCCTAGAGGAGCAGATTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | AAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTaGCCACAAAGGGGTAGGAGGGAGGCTGGGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: KGLLVFPNWKEG*PQRGRREAGRW Trigger: CCATCTCCCAGCCTCCCTCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR GCA 72 bp | ATTCATGGCTATGCCCACTGGTTCTCCCACTGTGCCTaGTGTTTCAGTCCCTGGAGCTGGGGTCCTCTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: IHGYAHWFSHCA*CFSPWSWGPLL Trigger: AAGGAGAGGACCCCAGCTCCAGGGACTGAAACAGCAGGCACAGTGGGAGAACCAGTGGGCATAGCCATGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR TCA 72 bp | GGGAGGCTGGGAGATGGTTGGATTTTGAGTGAAGGGTaGGAAAGCCTGAGGTCCGTAAAGTTCCGCCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRLGDGWILSEG*ESLRSVKFRPR Trigger: CCTAGGGCGGAACTTTACGGACCTCAGGCTTTCTCACCCTTCACTCAAAATCCAACCATCTCCCAGCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR TCA 72 bp | ACTGCAGCCAGCTCTTCCCTTAGCTGTAGGAGGAGCTaGTTCATGGCTATGCCCACTGGTTCTCCCACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TAASSSLSCRRS*FMAMPTGSPTV Trigger: CACAGTGGGAGAACCAGTGGGCATAGCCATGAATCAGCTCCTCCTACAGCTAAGGGAAGAGCTGGCTGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | GCTCCCGGTTCTTGCACTAGGAGATGGCCTAGTTCTTaGGCTTGCTCTCGAATCTGCTCCTCTAGGCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: APGSCTRRWPSS*ACSRICSSRLE Trigger: CTCAAGCCTAGAGGAGCAGATTCGAGAGCAAGCGCAAGAACTAGGCCATCTCCTAGTGCAAGAACCGGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR TCA 72 bp | GGTAGGAGGGAGGCTGGGAGATGGTTGGATTTTGAGTaGAGGGTGAGAAAGCCTGAGGTCCGTAAAGTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: GRREAGRWLDFE*RVRKPEVRKVP Trigger: CGGAACTTTACGGACCTCAGGCTTTCTCACCCTTCACTCAAAATCCAACCATCTCCCAGCCTCCCTCCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR GCA 72 bp | CTTCCCTTAGCTGTAGGAGGAGCTGATTCATGGCTATaGCCACTGGTTCTCCCACTGTGCCTGCTGTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LPLAVGGADSWL*PLVLPLCLLFQ Trigger: CTGAAACAGCAGGCACAGTGGGAGAACCAGTGGGCATAGCCATGAATCAGCTCCTCCTACAGCTAAGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | TCTCTGGACCCCTGGACAGGGACCTCAGGTTTCACATaGAGTCCCATCTTTGCTCCATCTAACCTTACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLDPWTGTSGFT*SPIFAPSNLTS Trigger: GCTGGTAAGGTTAGATGGAGCAAAGATGGGACTGCATGTGAAACCTGAGGTCCCTGTCCAGGGGTCCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CCA 72 bp | CTGCTTCCCGAGCTCTCAGCTCGGCCACTTCTTCCGTaGCTTGGTAGAGCAGTTGTTTCAGCTTGCAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: LLPELSARPLLP*LGRAVVSACKS Trigger: AGATTTGCAAGCTGAAACAACTGCTCTACCAAGCCACGGAAGAAGTGGCCGAGCTGAGAGCTCGGGAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGCCAGTGCCTTCTGCTGCTTCTTCAGCTCTTGGATCCGCTCAGCCAGCAGCATTTGCAAGCAGTATaGTCAGACACTCTGTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: CSQCLLLLLQLLDPLSQQHLQAV*SDTLSG Trigger: GCCTGACAGAGTGTCTGACAATACTGCTTGCAAATG...CTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCAGCAGAAGGCACTGGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CCA 72 bp | ATCTTGGCTTCCTTGTCCCGGCAAGCCCCGATGAGGTaGTTTGTCTTCTCTTTCAGGAGCTCAGCAGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ILASLSRQAPMR*FVFSFRSSAVF Trigger: GAAAACTGCTGAGCTCCTGAAAGAGAAGACAAACCACCTCATCGGGGCTTGCCGGGACAAGGAAGCCAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR-3UTR CAA 90 bp | TTCGAAGTAGGATGTTGTAGACGTCTTGTTCCATGTAGCCCCGAGCAGCATTCATTGATCTTGGCTTCCTaGTCCCGGCAAGCCCCGATG | + |
|
Preference number: 3 (lower is better) Translates to: FEVGCCRRLVPCSPEQHSLILAS*SRQAPM Trigger: CATCGGGGCTTGCCGGGACAAGGAAGCCAAGATCAA...TGAATGCTGCTCGGGGCTACATGGAACAAGACGTCTACAACATCCTACTTCGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | ACTAATGTTGGGTTTATTGTAGCCAGTGCCTTCTGCTaGTTCTTCAGCTCTTGGATCCGCTCAGCCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TNVGFIVASAFC*FFSSWIRSASR Trigger: CCTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCAGCAGAAGGCACTGGCTACAATAAACCCAACATTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR GCA 72 bp | TCTCGCGCCCCAACTCTCCCAATTCCTCCAGCAAGTTaGTATTGCTCAGTCTCAAAGCTGACACCTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SRAPTLPIPPAS*YCSVSKLTPLS Trigger: AGAAAGAGGTGTCAGCTTTGAGACTGAGCAATAGCAACTTGCTGGAGGAATTGGGAGAGTTGGGGCGCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CCA 72 bp | ATTGACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTaGAAAGAGGGCTGCCCACAAAGGGGTAGGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: IDVLKGLLVFPN*KEGCPQRGRRE Trigger: CTCCCTCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAACTAATGTTGGGTTTATTGTAGCCAGTGCCTTCTGCTGCTTCTTCAGCTCTGCTGATTTGTCATCCTaGTCTGTGACATTAACTCGG | + |
|
Preference number: 3 (lower is better) Translates to: GTNVGFIVASAFCCFFSSADLSS*SVTLTR Trigger: CCGAGTTAATGTCACAGACAAGGATGACAAATCAGC...AGAGCTGAAGAAGCAGCAGAAGGCACTGGCTACAATAAACCCAACATTAGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| CDS-3UTR CCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCGCATCTCGCCAGCCTaGCGCTCCTGCTCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQRISPA*RSCSAA Trigger: GGCGGCGGAGCAGGAGCGCCAGGCTGGCGAGATGCG...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | GAGCATCCCGGGACTGCCTTCGGGGCTCCGTCTCTGGACCCCTGGACAGGGACCGCCTCCAGCAGCTTCTaGTCACGTCGGTTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: EHPGTAFGAPSLDPWTGTASSSF*SRRFHF Trigger: GAAATGGAACCGACGTGATCAGAAGCTGCTGGAGGC...GGTCCCTGTCCAGGGGTCCAGAGACGGAGCCCCGAAGGCAGTCCCGGGATGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| CDS-3UTR TCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGTTTGGTGGGTCGGGCTaGCTTCCTAGAGGCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQFGGSG*LPRGQG Trigger: GCCTTGGCCTCTAGGAAGTCAGCCCGACCCACCAAA...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048427.9 ENSMUST00000122960.6 |
||
| CDS-3UTR TCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGACCACCTCCACTCTTCTaGGCACCGCTCCTCCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: APLVGNHRPPTCPPQLDRPPPLF*APLLPL Trigger: GAGGGGGAGGAGCGGTGCTCAGAAGAGTGGAGGTGG...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR CAA 72 bp | CTCCGCAACTGCTGTAGCTGGACCTGTGCCTCGGGCTaGGGCACAAACTCCCGGTGTAGCCTCTGGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRNCCSWTCASG*GTNSRCSLWVK Trigger: CTTGACCCAGAGGCTACACCGGGAGTTTGTGCCCAAGCCCGAGGCACAGGTCCAGCTACAGCAGTTGCGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CAA 72 bp | TCCCGACAGGCTGTGTTGTACTTCTCCAGCACGACTTaGAGCTCCTGGCCCCAAGCCTGTGCCTGGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRQAVLYFSSTT*SSWPQACAWAT Trigger: GGTGGCCCAGGCACAGGCTTGGGGCCAGGAGCTCAAAGTCGTGCTGGAGAAGTACAACACAGCCTGTCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| CDS-3UTR TCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGGAGATGGTGGCCAAATaGAGGGCAGTGCTTCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQEMVAK*RAVLPS Trigger: GGACGGAAGCACTGCCCTTCATTTGGCCACCATCTC...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGACGGCCACCTCAGCGCTaGCTTTCTCACAGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: APLVGNHRPPTCPPQLDRRPPQR*LSHRPG Trigger: TCCTGGCCTGTGAGAAAGGCAGCGCTGAGGTGGCCG...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGATATCCACCAGGGTGCTaGTGCAGGCCTGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: APLVGNHRPPTCPPQLDRYPPGC*CRPAAP Trigger: AGGAGCTGCAGGCCTGCATCAGCACCCTGGTGGATA...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGATCTCCAGCACGACTTTaGGCTCCTGGCCCCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: APLVGNHRPPTCPPQLDRSPARL*APGPKP Trigger: AGGCTTGGGGCCAGGAGCTCAAAGTCGTGCTGGAGA...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGACTCTGTCAGGCCTTTaGAGGCTGCCAGATGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQTLSGL*RLPDGT Trigger: CGTTCCATCTGGCAGCCTCCAAAGGCCTGACAGAGT...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGGTGGCTGACAGGAGATaGTGGCCAAATGAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQVADRR*WPNEGQ Trigger: CTGCCCTTCATTTGGCCACCATCTCCTGTCAGCCAC...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGTCCAGGAAGGCTTCGTaGTCACACAGCAGGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQSRKAS*SHSRRT Trigger: TGTCCTCCTGCTGTGTGACCACGAAGCCTTCCTGGA...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGTCTCTGCAACAGCTGTaGGCAGATAGCTGCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQSLQQL*ADSCMT Trigger: GGTCATGCAGCTATCTGCTCACAGCTGTTGCAGAGA...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGAACCTGCTCAGTGTTCTaGAGGCCAAGGTTCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: APLVGNHRPPTCPPQLDRTCSVF*RPRFCP Trigger: GGGGCAGAACCTTGGCCTCCAGAACACTGAGCAGGT...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGACATGGCTATGCCCACTaGTTCTCCCACTGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: APLVGNHRPPTCPPQLDRHGYAH*FSHCAC Trigger: GCAGGCACAGTGGGAGAACCAGTGGGCATAGCCATG...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGGATCCCCTCAGCTGCTaGTTTTCCTCTTCCAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQDPLSC*FSSSNR Trigger: TCGGTTGGAAGAGGAAAACCAGCAGCTGAGGGGATC...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCGGCCACTTCTTCCGTaGCTTGGTAGAGCAGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQRPLLP*LGRAVV Trigger: AACAACTGCTCTACCAAGCCACGGAAGAAGTGGCCG...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGACTCCACCGCCACTTGTaGACTGGAGCAGGAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: APLVGNHRPPTCPPQLDRLHRHL*TGAGED Trigger: ATCTTCTCCTGCTCCAGTTCACAAGTGGCGGTGGAG...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048427.9 ENSMUST00000122960.6 |
||
| CDS-3UTR TCA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGACGAGCCAGCACCCGTTaGGCCTCAAGGTGCCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGRASTR*ASRCLS Trigger: GGATAGGCACCTTGAGGCTCAACGGGTGCTGGCTCG...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGAGATGGCCTAGTTCTTaGGCTTGCTCTCGAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQRWPSS*ACSRIC Trigger: GCAGATTCGAGAGCAAGCGCAAGAACTAGGCCATCT...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTCCTCCAGGGGTTCTaGAGCTGTACTCTGTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQLLQGF*SCTLCI Trigger: AATACACAGAGTACAGCTGCAGAACCCCTGGAGGAG...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAACCAGCGTCCGCTCCATaGCTCAGGAGCAGCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQPASAP*LRSSSA Trigger: GGCCGAGCTGCTCCTGAGCCATGGAGCGGACGCTGG...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGACTGTGGCTTTCCCGGTaGTTTCTGAACTTGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: APLVGNHRPPTCPPQLDRLWLSR*FLNLGP Trigger: AGGGCCCAAGTTCAGAAACCACCGGGAAAGCCACAG...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR CAA 72 bp | CTGCTGGTTTTCCTCTTCCAACCGAGCCAGCACCCGTaGAGCCTCAAGGTGCCTATCCACCAGGGTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLVFLFQPSQHP*SLKVPIHQGAD Trigger: ATCAGCACCCTGGTGGATAGGCACCTTGAGGCTCAACGGGTGCTGGCTCGGTTGGAAGAGGAAAACCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| CDS-3UTR GCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGAACTCGGGCACCTCTCTaGAACAGCTGTGAGCAGATA | + |
|
Preference number: 4 (lower is better) Translates to: APLVGNHRPPTCPPQLDRTRAPL*NSCEQI Trigger: TATCTGCTCACAGCTGTTGCAGAGAGGTGCCCGAGT...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGAGCTGATTCATGGCTATaGCCACTGGTTCTCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: APLVGNHRPPTCPPQLDRADSWL*PLVLPL Trigger: CAGTGGGAGAACCAGTGGGCATAGCCATGAATCAGC...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGACTTCTTCCGAAAGCTaGTCGAGCTTCTTCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQTSSES*SSFFSN Trigger: GTTGCTGAAGAAGCTCGAGCAGCTTTCGGAAGAAGT...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGATTCAGTCCCTGGAGCTaGGGTCCTCTCCTTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGFSPWS*GPLLLA Trigger: GGCCAGAAGGAGAGGACCCCAGCTCCAGGGACTGAA...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGACTTGAGGGAGGCCTCTaGTTCCCCACAGGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGLEGGL*FPTGSQ Trigger: TTGGCTCCCTGTGGGGAACCAGAGGCCTCCCTCAAG...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGCGCGTCTTCTCGTGCTaGCGCAGGCTGGCTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVKGSACLSKLERGLPTKRVFSC*RRLAAS Trigger: GGAAGCAGCCAGCCTGCGCCAGCACGAGAAGACGCG...CTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGAGAGAAGGCTGCAGCGTaGGCCTTGCACTCATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGEKAAA*ALHSSV Trigger: GACAGATGAGTGCAAGGCTCACGCTGCAGCCTTCTC...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAACCACTCATCGTGGCCTaGACGGCCCGTAGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQPLIVA*TARSSS Trigger: GGAAGAGCTACGGGCCGTGCAGGCCACGATGAGTGG...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCATCTTTACTGTCTGTCCTATCCACAGTCATCCCGTTAGTCACTAATCTTGTGCCCCAAGCCTGTGCCTaGGCCACCAGCGAGCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSVLSTVIPLVTNLVPQACA*ATSEPR Trigger: GCGAGGCTCGCTGGTGGCCCAGGCACAGGCTTGGGG...CACAAGATTAGTGACTAACGGGATGACTGTGGATAGGACAGACAGTAAAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGAATGACCACCCAGCGATaGAATCATCAGGGGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGMTTQR*NHQGCA Trigger: CGCACACCCCTGATGATTGCATCGCTGGGTGGTCAT...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGATTCTCCCACTGTGCCTaGTGTTTCAGTCCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGFSHCA*CFSPWS Trigger: GCTCCAGGGACTGAAACAGCAGGCACAGTGGGAGAA...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGACTGGTTCTCCCACTGTaGCTGCTGTTTCAGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGLVLPL*LLFQSL Trigger: CAGGGACTGAAACAGCAGGCACAGTGGGAGAACCAG...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAACTTTTCCCAGGCAGCTaGTGCAGCCTCAGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQLFPGS*CSLSSG Trigger: CCCAGAGCTGAGGCTGCAGCAGCTGCCTGGGAAAAG...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGTCCAGGGCGGCCACTTaGGGGGATGCTGTAACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVKGSACLSKLERGLPTKSRAAT*GDAVTL Trigger: CAAGGTTACAGCATCCCCGCAAGTGGCCGCCCTGGA...CTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAACCGTCTCTGGACCCCTaGACAGGGACCTCAGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQPSLDP*TGTSGF Trigger: GAAACCTGAGGTCCCTGTCCAGGGGTCCAGAGACGG...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR CAA 72 bp | GGACAGGGACCTCAGGTTTCACATGCAGTCCCATCTTaGCTCCATCTAACCTTACCAGCACCCTCTCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQGPQVSHAVPS*LHLTLPAPSQA Trigger: GGCTTGAGAGGGTGCTGGTAAGGTTAGATGGAGCAAAGATGGGACTGCATGTGAAACCTGAGGTCCCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CAA 72 bp | CAGCTCGGCCACTTCTTCCGTGGCTTGGTAGAGCAGTaGTTTCAGCTTGCAAATCTCCTGGCTCTTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: QLGHFFRGLVEQ*FQLANLLALPT Trigger: AGTGGGAAGAGCCAGGAGATTTGCAAGCTGAAACAACTGCTCTACCAAGCCACGGAAGAAGTGGCCGAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CAA 72 bp | TTCCCGAGCTCTCAGCTCGGCCACTTCTTCCGTGGCTaGGTAGAGCAGTTGTTTCAGCTTGCAAATCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPSSQLGHFFRG*VEQLFQLANLL Trigger: CAGGAGATTTGCAAGCTGAAACAACTGCTCTACCAAGCCACGGAAGAAGTGGCCGAGCTGAGAGCTCGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| CDS-3UTR TCA 90 bp | CGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGCCCGGCAAGCCCCGATaGGGTGGTTTGTCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVKGSACLSKLERGLPTKPGKPR*GGLSSL Trigger: AAGAGAAGACAAACCACCTCATCGGGGCTTGCCGGG...CTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGATCCTGTATGTGGAGATaGTCTCTTCGTGGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: APLVGNHRPPTCPPQLDRSCMWR*SLRGSS Trigger: AGAAGAACCACGAAGAGATCATCTCCACATACAGGA...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR CAA 72 bp | CGCCCCAACTCTCCCAATTCCTCCAGCAAGTTGCTATaGCTCAGTCTCAAAGCTGACACCTCTTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RPNSPNSSSKLL*LSLKADTSFSS Trigger: GCTGGAGAAAGAGGTGTCAGCTTTGAGACTGAGCAATAGCAACTTGCTGGAGGAATTGGGAGAGTTGGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| 3UTR CAA 72 bp | CTCTCGCGCCCCAACTCTCCCAATTCCTCCAGCAAGTaGCTATTGCTCAGTCTCAAAGCTGACACCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRPNSPNSSSK*LLLSLKADTSF Trigger: GAAAGAGGTGTCAGCTTTGAGACTGAGCAATAGCAACTTGCTGGAGGAATTGGGAGAGTTGGGGCGCGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| CDS-3UTR TCA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGATCTTCAGCAACTCCTTaGTCTTGGCTTCCTTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGSSATP*SWLPCP Trigger: GGGACAAGGAAGCCAAGATCAAGGAGTTGCTGAAGA...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | TGCATCCACAGCATCTTCATTAGCACCGTGCTGAAGCAAGACCTTCACACACTGCCGCCACTTGTGAACTaGAGCAGGAGAAGATGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: CIHSIFISTVLKQDLHTLPPLVN*SRRRCA Trigger: AGCGCATCTTCTCCTGCTCCAGTTCACAAGTGGCGG...CAGTGTGTGAAGGTCTTGCTTCAGCACGGTGCTAATGAAGATGCTGTGGATGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| CDS-3UTR CCA 90 bp | CGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGAGGGCCTTGATTTCCTaGAGCTCCCGGTTCTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RVKGSACLSKLERGLPTKRALIS*SSRFLH Trigger: GTGCAAGAACCGGGAGCTCCAGGAAATCAAGGCCCT...CTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGTGCTTCTTCAGCTCTTaGATCCGCTCAGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVKGSACLSKLERGLPTKCFFSS*IRSASR Trigger: CCTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCA...CTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | CATGATGGATCTCAGCCGGGGCTAATTCTTCAGCTCTCTTGGGAACTAATGTTGCTCCACCGCCACTTGTaGACTGGAGCAGGAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HDGSQPGLILQLSWELMLLHRHL*TGAGED Trigger: ATCTTCTCCTGCTCCAGTTCACAAGTGGCGGTGGAG...CAACATTAGTTCCCAAGAGAGCTGAAGAATTAGCCCCGGCTGAGATCCATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| CDS-3UTR TCA 90 bp | GCCCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGACGGAGACCAGGGCCTTaGTTTCCTGGAGCTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AHHSLIEPHYSLKEEIQRRRPGP*FPGAPG Trigger: ACCGGGAGCTCCAGGAAATCAAGGCCCTGGTCTCCG...TCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGTTAACTTTACTTCAATGCTCTATGCCCTACAGGACTCCCCAGTGTCAGCAGGCCTTTGGAGGCTaGCAGATGGAACGGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FQLTLLQCSMPYRTPQCQQAFGG*QMERGL Trigger: CAGTCCCCGTTCCATCTGGCAGCCTCCAAAGGCCTG...CTGACACTGGGGAGTCCTGTAGGGCATAGAGCATTGAAGTAAAGTTAACTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAACTGCAGCGTGAGCCTTaGACTCATCTGTCTTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQLQREP*THLSFA Trigger: TGCGAAAGACAGATGAGTGCAAGGCTCACGCTGCAG...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CCATCTTTACTGTCTGTCCTATCCACAGTCATCCCGTTAGTCACTAATCTTGTGTTCCCAGGCAGCTGCTaGAGCCTCAGCTCTGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSVLSTVIPLVTNLVFPGSC*SLSSGS Trigger: ACTCCCAGAGCTGAGGCTGCAGCAGCTGCCTGGGAA...CACAAGATTAGTGACTAACGGGATGACTGTGGATAGGACAGACAGTAAAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CCATCTTTACTGTCTGTCCTATCCACAGTCATCCCGTTAGTCACTAATCTTGTGACGCTCCTCCGCAACTaGTGTAGCTGGACCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSVLSTVIPLVTNLVTLLRN*CSWTCA Trigger: GGCACAGGTCCAGCTACAGCAGTTGCGGAGGAGCGT...CACAAGATTAGTGACTAACGGGATGACTGTGGATAGGACAGACAGTAAAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CCATCTTTACTGTCTGTCCTATCCACAGTCATCCCGTTAGTCACTAATCTTGTGGTGCTGATGCAGGCCTaGAGCTCCTCCAGGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSVLSTVIPLVTNLVVLMQA*SSSRGS Trigger: AGAACCCCTGGAGGAGCTGCAGGCCTGCATCAGCAC...CACAAGATTAGTGACTAACGGGATGACTGTGGATAGGACAGACAGTAAAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGAGGAGCTGATTCATaGCTATGCCCACTGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVKGSACLSKLERGLPTKGGADS*LCPLVL Trigger: GAGAACCAGTGGGCATAGCCATGAATCAGCTCCTCC...CTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR CAA 72 bp | TGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTaGATCGAGCCTCATTATTCCAAAAGAGAAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVITVHPPAHHS*IEPHYSKREMP Trigger: AGGCATTTCTCTTTTGGAATAATGAGGCTCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| CDS-3UTR GCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAAGGATCCCCTCAGCTaGTGGTTTTCCTCTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQKDPLS*WFSSSN Trigger: GTTGGAAGAGGAAAACCAGCAGCTGAGGGGATCCTT...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAACATTTGAGTCTAGTTTaGTGGGTCGGGCTGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQHLSLV*WVGLTS Trigger: GGAAGTCAGCCCGACCCACCAAACTAGACTCAAATG...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGTCTGAACTTGGGCCCTaGGGCAGCCCCTGCTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPQLDRASLFPKRRNSKMSELGP*GSPCSG Trigger: ACCAGAGCAGGGGCTGCCCCAGGGCCCAAGTTCAGA...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAACAAGCCCCGATGAGGTaGTTTGTCTTCTCTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQQAPMR*FVFSFR Trigger: CCTGAAAGAGAAGACAAACCACCTCATCGGGGCTTG...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | CCATCTTTACTGTCTGTCCTATCCACAGTCATCCCGTTAGTCACTAATCTTGTGGCCTCCAGCAGCTTCTaGTCACGTCGGTTCCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSVLSTVIPLVTNLVASSSF*SRRFHF Trigger: GAAATGGAACCGACGTGATCAGAAGCTGCTGGAGGC...CACAAGATTAGTGACTAACGGGATGACTGTGGATAGGACAGACAGTAAAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAACAATCATCAGGGGTGTaGGTCCATCATTATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQQSSGV*VHHYPA Trigger: TGCTGGATAATGATGGACGCACACCCCTGATGATTG...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CTGTTGATATCAGCCCCATTTGCAAGCAGTATTGTCAGACACTCTGTCAGGCCTCATTTGAGTCTAGTTTaGTGGGTCGGGCTGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLISAPFASSIVRHSVRPHLSLV*WVGLTS Trigger: GGAAGTCAGCCCGACCCACCAAACTAGACTCAAATG...AGGCCTGACAGAGTGTCTGACAATACTGCTTGCAAATGGGGCTGATATCAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTTAACTTTACTTCAATGCTCTATGCCCTACAGGACTCCCCAGTGTCAGGCTGACAGGAGATGGTaGCCAAATGAAGGGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQLTLLQCSMPYRTPQCQADRRW*PNEGQC Trigger: GCACTGCCCTTCATTTGGCCACCATCTCCTGTCAGC...CTGACACTGGGGAGTCCTGTAGGGCATAGAGCATTGAAGTAAAGTTAACTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGCCTGTGCCTCGGGCTTaGGCACAAACTCCCGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PPQLDRASLFPKRRNSKMPVPRA*AQTPGV Trigger: TACACCGGGAGTTTGTGCCCAAGCCCGAGGCACAGG...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| 3UTR CAA 72 bp | TGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTaGATCGAGCCTCATTATTCCCTAAAAGAAGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: WVITVHPPAHHS*IEPHYSLKEEI Trigger: AATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | TTTCAGTTAACTTTACTTCAATGCTCTATGCCCTACAGGACTCCCCAGTGTCAGGCTCAGTCTCAAAGCTaGCACCTCTTTCTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQLTLLQCSMPYRTPQCQAQSQS*HLFLQL Trigger: CAGCTGGAGAAAGAGGTGTCAGCTTTGAGACTGAGC...CTGACACTGGGGAGTCCTGTAGGGCATAGAGCATTGAAGTAAAGTTAACTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAACCAGCAAGTTGCTATTaGTCAGTCTCAAAGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQPASCY*SVSKLT Trigger: TGTCAGCTTTGAGACTGAGCAATAGCAACTTGCTGG...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGCTCTGGGTCAAGGACTaGAGCTCTCCCTGCAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PPQLDRASLFPKRRNSKMLWVKD*SSPCKR Trigger: ACGCTTGCAGGGAGAGCTGCAGTCCTTGACCCAGAG...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTTAACTTTACTTCAATGCTCTATGCCCTACAGGACTCCCCAGTGTCAGTTGGTTGCTGTCCTGTaGCTTTCCCGGTGGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQLTLLQCSMPYRTPQCQLVAVL*LSRWFL Trigger: CAGAAACCACCGGGAAAGCCACAGGACAGCAACCAA...CTGACACTGGGGAGTCCTGTAGGGCATAGAGCATTGAAGTAAAGTTAACTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | GCCCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATTCACACACTGTGGCTaGCAGGAGATGGTGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AHHSLIEPHYSLKEEIQRFTHCG*QEMVAK Trigger: TTTGGCCACCATCTCCTGTCAGCCACAGTGTGTGAA...TCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAATGGACTGCGATTTTCTaGATCCACAGCATCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQWTAIF*IHSIFI Trigger: AATGAAGATGCTGTGGATGCAGAAAATCGCAGTCCA...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CCATCTTTACTGTCTGTCCTATCCACAGTCATCCCGTTAGTCACTAATCTTGTGGCTTGCTCTCGAATCTaGTCCTCTAGGCTTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSVLSTVIPLVTNLVACSRI*SSRLEK Trigger: CTTCTCAAGCCTAGAGGAGCAGATTCGAGAGCAAGC...CACAAGATTAGTGACTAACGGGATGACTGTGGATAGGACAGACAGTAAAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGCCGCCACTTGTGAACTaGAGCAGGAGAAGATGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPQLDRASLFPKRRNSKMPPLVN*SRRRCA Trigger: AGCGCATCTTCTCCTGCTCCAGTTCACAAGTGGCGG...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGTGCTGTTTCAGTCCCTaGAGCTGGGGTCCTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPQLDRASLFPKRRNSKMCCFSP*SWGPLL Trigger: AAGGAGAGGACCCCAGCTCCAGGGACTGAAACAGCA...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGTGCGCAGCTTATCTGTaGCCTCCTTCTCCATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPQLDRASLFPKRRNSKMCAAYL*PPSPWP Trigger: TGGCCATGGAGAAGGAGGCCACAGATAAGCTGCGCA...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCATCTTTACTGTCTGTCCTATCCACAGTCATCCCGTTAGTCACTAATCTTGTGGAGATGATCTCTTCGTaGTTCTTCTGGGAGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSVLSTVIPLVTNLVEMISS*FFWESC Trigger: GCAGGACTCCCAGAAGAACCACGAAGAGATCATCTC...CACAAGATTAGTGACTAACGGGATGACTGTGGATAGGACAGACAGTAAAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR TCA 90 bp | TTTCAGTTAACTTTACTTCAATGCTCTATGCCCTACAGGACTCCCCAGTGTCAGGCAGCATTCAGTAGATaGCTCCTGTATGTGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: FQLTLLQCSMPYRTPQCQAAFSR*LLYVEM Trigger: CATCTCCACATACAGGAGTCATCTACTGAATGCTGC...CTGACACTGGGGAGTCCTGTAGGGCATAGAGCATTGAAGTAAAGTTAACTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGGCCAGTGCCTTCTGCTaGTTCTTCAGCTCTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PPQLDRASLFPKRRNSKMASAFC*FFSSWI Trigger: GATCCAAGAGCTGAAGAAGCAGCAGAAGGCACTGGC...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | GCCCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGAGCCTTCTTTTCTTCCTaGTCTTTAGAGCATCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AHHSLIEPHYSLKEEIQRAFFSS*SLEHPG Trigger: CCCGGGATGCTCTAAAGAGCAGGAAGAAAAGAAGGC...TCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGAGCCCCTGCTCTGGTTaGGACTTTCTGTGTACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPQLDRASLFPKRRNSKMSPCSG*DFLCTS Trigger: TGAAGTACACAGAAAGTCCCAACCAGAGCAGGGGCT...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | GCCCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGACTAAGGGCTCTCCTCTaGTTCCAAGAGCCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: AHHSLIEPHYSLKEEIQRLRALL*FQEPSF Trigger: AAAAGAAGGCTCTTGGAACCAGAGGAGAGCCCTTAG...TCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGGTTTATTGTAGCCAGTaGCTTCTGCTGCTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPQLDRASLFPKRRNSKMVYCSQ*LLLLLQ Trigger: CTGAAGAAGCAGCAGAAGGCACTGGCTACAATAAAC...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | GCCCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGAATTCCTCCAGCAAGTTaGTATTGCTCAGTCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AHHSLIEPHYSLKEEIQRIPPAS*YCSVSK Trigger: CTTTGAGACTGAGCAATAGCAACTTGCTGGAGGAAT...TCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR GCA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGGATATCAGCCCCATTTaGAAGCAGTATTGTCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PPQLDRASLFPKRRNSKMDISPI*KQYCQT Trigger: TGTCTGACAATACTGCTTGCAAATGGGGCTGATATC...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTTAACTTTACTTCAATGCTCTATGCCCTACAGGACTCCCCAGTGTCAGATTCTTCAGCTCTCTTaGGAACTAATGTTGGGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FQLTLLQCSMPYRTPQCQILQLS*ELMLGL Trigger: TAAACCCAACATTAGTTCCCAAGAGAGCTGAAGAAT...CTGACACTGGGGAGTCCTGTAGGGCATAGAGCATTGAAGTAAAGTTAACTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGAACCTGTGCCTCGGGCTaGGGCACAAACTCCCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: APLVGNHRPPTCPPQLDRTCASG*GTNSRC Trigger: ACACCGGGAGTTTGTGCCCAAGCCCGAGGCACAGGT...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGACGGGGACTGGCCATTaGAGTCTAGTTTGGTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQTGTGH*SLVWWV Trigger: GACCCACCAAACTAGACTCAAATGGCCAGTCCCCGT...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048427.9 ENSMUST00000122960.6 |
||
| CDS-3UTR CAA 90 bp | CCACCCACAGCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCCATTTGAGTCTAGTTaGGTGGGTCGGGCTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPTAPLVGNHRPPTCPPQPFESS*VGRADF Trigger: GAAGTCAGCCCGACCCACCAAACTAGACTCAAATGG...CTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGCTGTGGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048427.9 ENSMUST00000122960.6 |
||
| CDS-3UTR CAA 90 bp | GCACCACTAGTGGGTAATCACCGTCCACCCACCTGCCCACCACAGCTTGATCGACCCATTGGTGTTTGGTaGCTGTCCTGTGGCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: APLVGNHRPPTCPPQLDRPIGVW*LSCGFP Trigger: GGGAAAGCCACAGGACAGCAACCAAACACCAATGGG...TCGATCAAGCTGTGGTGGGCAGGTGGGTGGACGGTGATTACCCACTAGTGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | CCTGCAGCTCCTCCAGGGGTTCTGCAGCTGTACTCTGTGTATTCCCCTTGCCCACCATTTGAGTCTAGTTaGGTGGGTCGGGCTGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PAAPPGVLQLYSVYSPCPPFESS*VGRADF Trigger: GAAGTCAGCCCGACCCACCAAACTAGACTCAAATGG...TGGGCAAGGGGAATACACAGAGTACAGCTGCAGAACCCCTGGAGGAGCTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122960.6 |
||
| CDS-3UTR CAA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGACAGCCCCTGCTCTGGTaGGGACTTTCTGTGTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGQPLLW*GLSVYF Trigger: GAAGTACACAGAAAGTCCCAACCAGAGCAGGGGCTG...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS CCA 90 bp | CAGCCCCATTTGCAAGCAGTATTGTCAGACACTCTGTCAGGCCTTTaGAGGCTGCCAGATGGAACGGGGACTGGCCATTTGAGTCTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QPHLQAVLSDTLSGL*RLPDGTGTGHLSLV Trigger: AACTAGACTCAAATGGCCAGTCCCCGTTCCATCTGGCAGCCTCCAAAGGCCTGACAGAGTGTCTGACAATACTGCTTGCAAATGGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | CGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGCACTCTGTCAGGCCTTaGGAGGCTGCCAGATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RVKGSACLSKLERGLPTKHSVRP*EAARWN Trigger: GTTCCATCTGGCAGCCTCCAAAGGCCTGACAGAGTG...CTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAATCTGCTCCTCTAGGCTaGAGAAGGCTGCAGCGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQSAPLG*RRLQRE Trigger: CTCACGCTGCAGCCTTCTCAAGCCTAGAGGAGCAGA...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | CGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGCCTCCAGAACTGGTCTaGACAAAGCCCCTCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVKGSACLSKLERGLPTKPPELV*TKPLWQ Trigger: CTGCCAGAGGGGCTTTGTCAAGACCAGTTCTGGAGG...CTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | GCCCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGACGGTGGTTTCTGAACTaGGGCCCTGGGGCAGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AHHSLIEPHYSLKEEIQRRWFLN*GPGAAP Trigger: AGGGGCTGCCCCAGGGCCCAAGTTCAGAAACCACCG...TCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGATCCAGCAAGTTGCTATaGCTCAGTCTCAAAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGSSKLL*LSLKAD Trigger: GTCAGCTTTGAGACTGAGCAATAGCAACTTGCTGGA...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | CCATCTTTACTGTCTGTCCTATCCACAGTCATCCCGTTAGTCACTAATCTTGTGGGGGATGCTGTAACCTaGAGGGAGGCCTCTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSLLSVLSTVIPLVTNLVGDAVT*REASGS Trigger: GGAACCAGAGGCCTCCCTCAAGGTTACAGCATCCCC...CACAAGATTAGTGACTAACGGGATGACTGTGGATAGGACAGACAGTAAAGATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | CCATCTTTACTGTCTGTCCTATCCACAGTCATCCCGTTAGTCACTAATCTTGTGCTGCTTCTTCAGCTCTaGGATCCGCTCAGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSLLSVLSTVIPLVTNLVLLLQL*DPLSQQ Trigger: CTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCAG...CACAAGATTAGTGACTAACGGGATGACTGTGGATAGGACAGACAGTAAAGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | GCCCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATCTCCAGCTGTCCCTTaGCCAGGCCTCCTCCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AHHSLIEPHYSLKEEIQRSPAVP*PGLLLR Trigger: CCTTAGGAGGAGGCCTGGCAAAGGGACAGCTGGAGA...TCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | CGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGCATTTGCAAGCAGTATaGTCAGACACTCTGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RVKGSACLSKLERGLPTKHLQAV*SDTLSG Trigger: GCCTGACAGAGTGTCTGACAATACTGCTTGCAAATG...CTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | GACGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAGGCTTGGTAGAGCAGTaGTTTCAGCTTGCAAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: DVLKGLLVFPNWKEGCPQGLVEQ*FQLANL Trigger: GAGATTTGCAAGCTGAAACAACTGCTCTACCAAGCC...TTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
||
| CDS-3UTR CAA 90 bp | CGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGTTCTTCAGCAACTCCTaGATCTTGGCTTCCTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVKGSACLSKLERGLPTKFFSNS*ILASLS Trigger: GGACAAGGAAGCCAAGATCAAGGAGTTGCTGAAGAA...CTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS-3UTR CAA 90 bp | AGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGGGGTAGGAAATTCTTCAGCTCTCTaGGGAACTAATGTTGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: RVCLSFQTGKRAAHKGVGNSSAL*GTNVGF Trigger: AAACCCAACATTAGTTCCCAAGAGAGCTGAAGAATT...TCCTACCCCTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS-3UTR CAA 90 bp | CCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGATGTTGATCTTGGCTTCCTaGTCCCGGCAAGCCCCGATG | + |
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Preference number: 5 (lower is better) Translates to: PPQLDRASLFPKRRNSKMLILAS*SRQAPM Trigger: CATCGGGGCTTGCCGGGACAAGGAAGCCAAGATCAA...CATCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS-3UTR CAA 90 bp | CGTGTTAAAGGGTCTGCTTGTCTTTCCAAACTGGAAAGAGGGCTGCCCACAAAGAGGATCAAAGCTGATTaGTCATCCTTGTCTGTGACA | + |
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Preference number: 5 (lower is better) Translates to: RVKGSACLSKLERGLPTKRIKAD*SSLSVT Trigger: TGTCACAGACAAGGATGACAAATCAGCTTTGATCCT...CTTTGTGGGCAGCCCTCTTTCCAGTTTGGAAAGACAAGCAGACCCTTTAACACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS-3UTR CAA 90 bp | GCCCACCACAGCTTGATCGAGCCTCATTATTCCCTAAAAGAAGAAATTCAAAGAAGCAACTCCTTGATCTaGGCTTCCTTGTCCCGGCAA | + |
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Preference number: 5 (lower is better) Translates to: AHHSLIEPHYSLKEEIQRSNSLI*ASLSRQ Trigger: TTGCCGGGACAAGGAAGCCAAGATCAAGGAGTTGCT...TCTTTGAATTTCTTCTTTTAGGGAATAATGAGGCTCGATCAAGCTGTGGTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS-3UTR CAA 90 bp | CCATCTTTACTGTCTGTCCTATCCACAGTCATCCCGTTAGTCACTAATCTTGTGAGCAGTTGTTTCAGCTaGCAAATCTCCTGGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: PSLLSVLSTVIPLVTNLVSSCFS*QISWLF Trigger: GAAGAGCCAGGAGATTTGCAAGCTGAAACAACTGCT...CACAAGATTAGTGACTAACGGGATGACTGTGGATAGGACAGACAGTAAAGATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS-3UTR CAA 90 bp | TTTCAGTTAACTTTACTTCAATGCTCTATGCCCTACAGGACTCCCCAGTGTCAGGCTGATTTGTCATCCTaGTCTGTGACATTAACTCGG | + |
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Preference number: 5 (lower is better) Translates to: FQLTLLQCSMPYRTPQCQADLSS*SVTLTR Trigger: CCGAGTTAATGTCACAGACAAGGATGACAAATCAGC...CTGACACTGGGGAGTCCTGTAGGGCATAGAGCATTGAAGTAAAGTTAACTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS-3UTR CAA 90 bp | TTTCAGTTAACTTTACTTCAATGCTCTATGCCCTACAGGACTCCCCAGTGTCAGAATTCCTCCAGCAAGTaGCTATTGCTCAGTCTCAAA | + |
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Preference number: 5 (lower is better) Translates to: FQLTLLQCSMPYRTPQCQNSSSK*LLLSLK Trigger: TTTGAGACTGAGCAATAGCAACTTGCTGGAGGAATT...CTGACACTGGGGAGTCCTGTAGGGCATAGAGCATTGAAGTAAAGTTAACTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS CAA 90 bp | TTGGAGGCTGCCAGATGGAACGGGGACTGGCCATTTGAGTCTAGTTaGGTGGGTCGGGCTGACTTCCTAGAGGCCAAGGCAGCCACGCGT | + |
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Preference number: 6 (lower is better) Translates to: LEAARWNGDWPFESS*VGRADFLEAKAATR Trigger: ACGCGTGGCTGCCTTGGCCTCTAGGAAGTCAGCCCGACCCACCAAACTAGACTCAAATGGCCAGTCCCCGTTCCATCTGGCAGCCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS CAA 72 bp | GCCAGATGGAACGGGGACTGGCCATTTGAGTCTAGTTaGGTGGGTCGGGCTGACTTCCTAGAGGCCAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: ARWNGDWPFESS*VGRADFLEAKA Trigger: TGCCTTGGCCTCTAGGAAGTCAGCCCGACCCACCAAACTAGACTCAAATGGCCAGTCCCCGTTCCATCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS CCA 72 bp | TTGCAAGCAGTATTGTCAGACACTCTGTCAGGCCTTTaGAGGCTGCCAGATGGAACGGGGACTGGCCATTTG | + |
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Preference number: 6 (lower is better) Translates to: LQAVLSDTLSGL*RLPDGTGTGHL Trigger: CAAATGGCCAGTCCCCGTTCCATCTGGCAGCCTCCAAAGGCCTGACAGAGTGTCTGACAATACTGCTTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS CAA 90 bp | TCAGCCCCATTTGCAAGCAGTATTGTCAGACACTCTGTCAGGCCTTaGGAGGCTGCCAGATGGAACGGGGACTGGCCATTTGAGTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: SAPFASSIVRHSVRP*EAARWNGDWPFESS Trigger: ACTAGACTCAAATGGCCAGTCCCCGTTCCATCTGGCAGCCTCCAAAGGCCTGACAGAGTGTCTGACAATACTGCTTGCAAATGGGGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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| CDS CAA 72 bp | TTTGCAAGCAGTATTGTCAGACACTCTGTCAGGCCTTaGGAGGCTGCCAGATGGAACGGGGACTGGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: FASSIVRHSVRP*EAARWNGDWPF Trigger: AAATGGCCAGTCCCCGTTCCATCTGGCAGCCTCCAAAGGCCTGACAGAGTGTCTGACAATACTGCTTGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048427.9 |
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