RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD31 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000109561

Ensembl transcript IDs: ENSMUST00000207464.2, ENSMUST00000208758.2

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCATGCTGCTCCATTACATaGCATGGCAGAAGCTCCTGC +
Preference number: 2 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSCCSIT*HGRSSC
Trigger: GCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCA...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
3UTR-3UTR CCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCGCAGGAGACTCAACATaGTTTTATTCAGAAATGCCT +
Preference number: 2 (lower is better)
Translates to: QGLSGILPANCLCASSPPAGDST*FYSEMP
Trigger: AGGCATTTCTGAATAAAACCATGTTGAGTCTCCTGC...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
3UTR CCA 72 bp CACATAGAACTTCCAATGCTGCTCCATTACATGGCATaGCAGAAGCTCCTGCTTGCTGATTTGAAGTATCTC +
Preference number: 3 (lower is better)
Translates to: HIELPMLLHYMA*QKLLLADLKYL
Trigger: GAGATACTTCAAATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTTCTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
3UTR-3UTR CAA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTTTATTCAGAAATGCCTaGATTTCAGAGGCGAAAAAG +
Preference number: 3 (lower is better)
Translates to: FQGLSGILPANCLCASSPLFRNA*ISEAKK
Trigger: CTTTTTCGCCTCTGAAATCAAGGCATTTCTGAATAA...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
3UTR TCA 72 bp GCAGGAGACTCAACATGGTTTTATTCAGAAATGCCTTaGTTTCAGAGGCGAAAAAGCACTAAACTGACCATA +
Preference number: 3 (lower is better)
Translates to: AGDSTWFYSEMP*FQRRKSTKLTI
Trigger: TATGGTCAGTTTAGTGCTTTTTCGCCTCTGAAATCAAGGCATTTCTGAATAAAACCATGTTGAGTCTCCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCATCACTGTCACAGTCTaGGGCCTCGGCACCGTTCTC +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPITVTV*GLGTVL
Trigger: GAGAACGGTGCCGAGGCCTCAGACTGTGACAGTGAT...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATATCACTGTCACAGTCTaGGGCCTCGGCACCGTTCTC +
Preference number: 4 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHITVTV*GLGTVL
Trigger: GAGAACGGTGCCGAGGCCTCAGACTGTGACAGTGAT...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATTGGCTGGGCATGTGCTaGGTCTCCCATAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHWLGMC*VSHSRR
Trigger: CCTCCTACTATGGGAGACTCAGCACATGCCCAGCCA...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp AACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTGATTCTGCGGCAGAGGCTCTaGAGCTCCCGCAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: NFQCCSITWHGRSSCLLILRQRL*SSRRWL
Trigger: CAACCATCTGCGGGAGCTGCAGAGCCTCTGCCGCAG...AATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR TCA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATATGGCGCTGATGGTCTaGTGCACAGGAAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHMALMV*CTGRLS
Trigger: TGAGAGCCTTCCTGTGCATCAGACCATCAGCGCCAT...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAGTGCTATCTGTGTGTaGAGCAGCAGCAGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHSAICV*SSSSGV
Trigger: GACTCCGCTGCTGCTGCTTCACACACAGATAGCACT...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAACCACTAGCTGCCTTGTaGAGGGGAGTCCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKPLAAL*RGVQPA
Trigger: TGCAGGTTGGACTCCCCTTCACAAGGCAGCTAGTGG...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAACTCTCTGGAAGTACCTaGGAGGTGAGGCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKLSGST*EVRLVE
Trigger: CTCCACCAGCCTCACCTCTCAGGTACTTCCAGAGAG...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTGCTGCTCCATTACATaGCATGGCAGAAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPCCSIT*HGRSSC
Trigger: GCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCA...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATGCAGCCACATGGAGCTaGCTTTCTCCTTTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHAATWS*LSPFLF
Trigger: GAACAAGAAAGGAGAAAGTCAGCTCCATGTGGCTGC...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTGTGAGTTTTCTGCGTaGGGAGTAAGAGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPCEFSA*GVRAAG
Trigger: ACCTGCTGCTCTTACTCCTCACGCAGAAAACTCACA...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAAAGTGCTATCTGTGTGTaGAGCAGCAGCAGCGGAGTC +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKSAICV*SSSSGV
Trigger: GACTCCGCTGCTGCTGCTTCACACACAGATAGCACT...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp AGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAAATCCCCCACTAGCTaGCTTGTGAAGGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RDSPGSYLLIVYVRLHLPKSPTS*LVKGSP
Trigger: TGGACTCCCCTTCACAAGGCAGCTAGTGGGGGATTT...AGGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAATCCAGGTCACATAACTaGCACCTCCCAGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKSRSHN*HLPGAP
Trigger: AGGAGCTCCTGGGAGGTGGCAGTTATGTGACCTGGA...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATCTTGAGCCAGGTGACTaGGTTCTGGTAAATCTGACC +
Preference number: 4 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHLEPGD*VLVNLT
Trigger: GGTCAGATTTACCAGAACCCAGTCACCTGGCTCAAG...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CACATAGAACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTCTTCTGGAAGGTCACTaGGAGTCTGGACAGCATGCT +
Preference number: 4 (lower is better)
Translates to: HIELPMLLHYMAWQKLLLLLEGH*ESGQHA
Trigger: AGCATGCTGTCCAGACTCTCAGTGACCTTCCAGAAG...AAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTTCTATGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR TCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAACTTCTGGAAGGTCACTaGGAGTCTGGACAGCATGCT +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKLLEGH*ESGQHA
Trigger: AGCATGCTGTCCAGACTCTCAGTGACCTTCCAGAAG...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CACATAGAACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGGCCCCATGCTTAAATaGCTCCATGGACACCCTGTA +
Preference number: 4 (lower is better)
Translates to: HIELPMLLHYMAWQKLLLGPMLK*LHGHPV
Trigger: TACAGGGTGTCCATGGAGTCATTTAAGCATGGGGCC...AAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTTCTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR TCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCATGGCTGGGCATGTGCTaGGTCTCCCATAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSWLGMC*VSHSRR
Trigger: CCTCCTACTATGGGAGACTCAGCACATGCCCAGCCA...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCGTTTTAGTAGGATGTTaGTGGGCAGACGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPVLVGC*WADAEE
Trigger: TTCCTCTGCGTCTGCCCATCAACATCCTACTAAAAC...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAACATCTACCTGAGACATaGTGGGCTGCACTGCTAAGC +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKHLPET*WAALLS
Trigger: GCTTAGCAGTGCAGCCCATCATGTCTCAGGTAGATG...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTTCATCACCGCATCATaGAGGGGAGTAATCTGGTAC +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPFITAS*RGVIWY
Trigger: GTACCAGATTACTCCCCTGCATGATGCGGTGATGAA...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAAAAATCCCCCACTAGCTaGCTTGTGAAGGGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKKSPTS*LVKGSP
Trigger: TGGACTCCCCTTCACAAGGCAGCTAGTGGGGGATTT...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATTCTCTCAAGGCCCCATaGTTAAATGACTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHSLKAP*LNDSMD
Trigger: GTCCATGGAGTCATTTAAGCATGGGGCCTTGAGAGA...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTCTGCGGCAGAGGCTCTaGAGCTCCCGCAGATGGTTG +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISLRQRL*SSRRWL
Trigger: CAACCATCTGCGGGAGCTGCAGAGCCTCTGCCGCAG...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp AGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTTTCATCTCTACCCTGTaGTGCCCAGGCATTCAAAGG +
Preference number: 4 (lower is better)
Translates to: RDSPGSYLLIVYVRLHLPFISTL*CPGIQR
Trigger: CCTTTGAATGCCTGGGCAGCACAGGGTAGAGATGAA...AGGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAGGTGGGTTCAGTTCTaGAGACATGGGCGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKRWVQF*RHGRLF
Trigger: GAAGAGGCGCCCATGTCTGCAGAACTGAACCCACCT...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAATGGCGCTGATGGTCTaGTGCACAGGAAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSMALMV*CTGRLS
Trigger: TGAGAGCCTTCCTGTGCATCAGACCATCAGCGCCAT...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTGATTCTTGTAGAATGGCGCTaGTGGTCTGATGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: NFQCCSITWHGRSSCLLILVEWR*WSDAQE
Trigger: TTCCTGTGCATCAGACCATCAGCGCCATTCTACAAG...AATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR TCA 90 bp CACATAGAACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTTGTGAGTTTTCTGCGTaGGGAGTAAGAGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: HIELPMLLHYMAWQKLLLCEFSA*GVRAAG
Trigger: ACCTGCTGCTCTTACTCCTCACGCAGAAAACTCACA...AAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTTCTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR TCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAACCTCCAGTGTTTTGGTaGCTCCATGAAACTTCAGGG +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKPPVFW*LHETSG
Trigger: CCCTGAAGTTTCATGGAGTCACCAAAACACTGGAGG...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCAATACAGCCTCTGTATaGACCACATCTCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPNTASV*TTSLLA
Trigger: AGCAAGCAGAGATGTGGTGCATACAGAGGCTGTATT...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGGGGAGTCCAACCTaGATTATCTCTGAGATTCAC +
Preference number: 4 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHKGSPT*IISEIH
Trigger: GTGAATCTCAGAGATAATGCAGGTTGGACTCCCCTT...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCAAGGGGAGTCCAACCTaGATTATCTCTGAGATTCAC +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPKGSPT*IISEIH
Trigger: GTGAATCTCAGAGATAATGCAGGTTGGACTCCCCTT...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAGCTCCCGCAGATGGTTaGTGGGAAGCTGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSAPADG*WEAVFL
Trigger: CAAGAAGACAGCTTCCCAGCAACCATCTGCGGGAGC...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATCCAGGTCACATAACTaGCACCTCCCAGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARSRSHN*HLPGAP
Trigger: AGGAGCTCCTGGGAGGTGGCAGTTATGTGACCTGGA...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp AACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTGATTGCACAGCTTTCTTTCTaGGAGTTGTGTTGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: NFQCCSITWHGRSSCLLIAQLSF*ELCCGV
Trigger: CACACCGCAACACAACTCCCAGAAAGAAAGCTGTGC...AATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR TCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCCATGCTGTTGCTGAGTaGGTAATTTATTCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPHAVAE*VIYSFS
Trigger: GGAGAACGAATAAATTACTCACTCAGCAACAGCATG...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCCAGAGCGTCCCTTTATaGAGGAGAAGAAAGAATCTT +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPQSVPL*RRRKNL
Trigger: AAGATTCTTTCTTCTCCTTCATAAAGGGACGCTCTG...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTCCACTAGCTGCCTTGTaGAGGGGAGTCCAACCTGCA +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISPLAAL*RGVQPA
Trigger: TGCAGGTTGGACTCCCCTTCACAAGGCAGCTAGTGG...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGCTTGTAGAATGGCGCTaGTGGTCTGATGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKLVEWR*WSDAQE
Trigger: TTCCTGTGCATCAGACCATCAGCGCCATTCTACAAG...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAGGCCCCATGCTTAAATaGCTCCATGGACACCCTGTA +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARGPMLK*LHGHPV
Trigger: TACAGGGTGTCCATGGAGTCATTTAAGCATGGGGCC...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTCTTCTTGTCACTACTaGTGTCTGAGTTACATGGCA +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPSSCHY*CLSYMA
Trigger: TGCCATGTAACTCAGACATCAGTAGTGACAAGAAGA...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGCTTTTCTCTTGTCCTTaGCAGCTGGGTCCCACATCA +
Preference number: 4 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKLFSCP*QLGPTS
Trigger: TGATGTGGGACCCAGCTGTCAAGGACAAGAGAAAAG...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CACATAGAACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTTTCATCACCGCATCATaGAGGGGAGTAATCTGGTAC +
Preference number: 4 (lower is better)
Translates to: HIELPMLLHYMAWQKLLLFITAS*RGVIWY
Trigger: GTACCAGATTACTCCCCTGCATGATGCGGTGATGAA...AAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTTCTATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR GCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCATCAAGTCTTTCAGCTaGACAGCTTTCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPIKSFS*TAFFLG
Trigger: TCCCAGAAAGAAAGCTGTGCAGCTGAAAGACTTGAT...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGACCTATACTAGCTTCATaGAGTGCTGTCCACCCATCG +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARPILAS*SAVHPS
Trigger: CGATGGGTGGACAGCACTTCATGAAGCTAGTATAGG...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR TCA 90 bp AACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTGATTTCTGGTACTTTCCTTTaGCATTCACATCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: NFQCCSITWHGRSSCLLISGTFL*HSHLLH
Trigger: GTGGAGCAGATGTGAATGTCAAAGGAAAGTACCAGA...AATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR TCA 90 bp AGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTGGTAGAAAGTTCAAATaGCTCTTCTGGAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: RDSPGSYLLIVYVRLHLPGRKFK*LFWKVT
Trigger: AGTGACCTTCCAGAAGAGTCATTTGAACTTTCTACC...AGGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCTTCTTCGCTTTATGTaGAGGGACAGGAGAACCAAT +
Preference number: 4 (lower is better)
Translates to: FQGLSGILPANCLCASSPLLRFM*RDRRTN
Trigger: ATTGGTTCTCCTGTCCCTTCACATAAAGCGAAGAAG...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAACTTCTTCGCTTTATGTaGAGGGACAGGAGAACCAAT +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKLLRFM*RDRRTN
Trigger: ATTGGTTCTCCTGTCCCTTCACATAAAGCGAAGAAG...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGGAGGAAAGAGAGCTCTaGGTGCTATCTGTGTGTGAA +
Preference number: 4 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKEEREL*VLSVCE
Trigger: TTCACACACAGATAGCACTCAGAGCTCTCTTTCCTC...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAATGTGCTGTTTTATCCTaGGGATCCTGTAACACTAGG +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKCAVLS*GSCNTR
Trigger: CCTAGTGTTACAGGATCCTCAGGATAAAACAGCACA...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAATTCAGGGTGAGGAAATaGCACTGTGAATACTGGGAA +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKFRVRK*HCEYWE
Trigger: TTCCCAGTATTCACAGTGTCATTTCCTCACCCTGAA...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCACACAGGAGAAGTCCCTaGGAGAAGACTTACTTCAGG +
Preference number: 4 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNAHRRSP*EKTYFR
Trigger: CCTGAAGTAAGTCTTCTCTCAGGGACTTCTCCTGTG...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGCCTATACTAGCTTCATaGAGTGCTGTCCACCCATTC +
Preference number: 4 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKPILAS*SAVHPF
Trigger: GAATGGGTGGACAGCACTTCATGAAGCTAGTATAGG...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTGCTCCCGCAGATGGTTaGTGGGAAGCTGTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISAPADG*WEAVFL
Trigger: CAAGAAGACAGCTTCCCAGCAACCATCTGCGGGAGC...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAAAAAGAGAGCTCTGAGTaGTATCTGTGTGTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKKESSE*YLCVKQ
Trigger: CTGCTTCACACACAGATAGCACTCAGAGCTCTCTTT...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp AACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTGATTCCACCCATCGTAACTTaGCTGATTGACATTTTCACC +
Preference number: 4 (lower is better)
Translates to: NFQCCSITWHGRSSCLLIPPIVT*LIDIFT
Trigger: GGTGAAAATGTCAATCAGCCAAGTTACGATGGGTGG...AATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR CCA 90 bp AACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTGATTTATGGGCTCATTTCCTaGAAGGTCTTCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: NFQCCSITWHGRSSCLLIYGLIS*KVFSPL
Trigger: AAGAGGAGAGAAGACCTTCCAGGAAATGAGCCCATA...AATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR CCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAGCACAGCTTTCTTTCTaGGAGTTGTGTTGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARAQLSF*ELCCGV
Trigger: CACACCGCAACACAACTCCCAGAAAGAAAGCTGTGC...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCACTTGAGCCAGGTGACTaGGTTCTGGTAAATCTGACC +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSLEPGD*VLVNLT
Trigger: GGTCAGATTTACCAGAACCCAGTCACCTGGCTCAAG...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTGATTGGTAGAAAGTTCAAATaGCTCTTCTGGAAGGTCACT +
Preference number: 4 (lower is better)
Translates to: NFQCCSITWHGRSSCLLIGRKFK*LFWKVT
Trigger: AGTGACCTTCCAGAAGAGTCATTTGAACTTTCTACC...AATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR TCA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCAGAGCGTCCCTTTATaGAGGAGAAGAAAGAATCTT +
Preference number: 4 (lower is better)
Translates to: FQGLSGILPANCLCASSPQSVPL*RRRKNL
Trigger: AAGATTCTTTCTTCTCCTTCATAAAGGGACGCTCTG...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTATATCACAAGGACTGTaGGTTTCAGAGTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: RDSPGSYLLIVYVRLHLPISQGL*VSESMF
Trigger: AAACATGGACTCTGAAACTCACAGTCCTTGTGATAT...AGGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCATGTAGCTTCTGCTTGTaGGTTTTCTGCGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNACSFCL*VFCVRS
Trigger: ACTCCTCACGCAGAAAACTCACAAGCAGAAGCTACA...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCATGTAGCTTCTGCTTGTaGGTTTTCTGCGTGAGGAGT +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSCSFCL*VFCVRS
Trigger: ACTCCTCACGCAGAAAACTCACAAGCAGAAGCTACA...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAGTTTTAGTAGGATGTTaGTGGGCAGACGCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSVLVGC*WADAEE
Trigger: TTCCTCTGCGTCTGCCCATCAACATCCTACTAAAAC...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCCAAGATGTAGAACTTTaGTCAGTTTTGGCATATGAG +
Preference number: 4 (lower is better)
Translates to: QGLSGILPANCLCASSPPQDVEL*SVLAYE
Trigger: CTCATATGCCAAAACTGAGCAAAGTTCTACATCTTG...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGTGGGCTAGGGAATCCTaGAATCCTTTTAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKWARES*NPFNSS
Trigger: GGAGCTATTAAAAGGATTGCAGGATTCCCTAGCCCA...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCATCTCTCAAGGCCCCATaGTTAAATGACTCCATGGAC +
Preference number: 4 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNASLKAP*LNDSMD
Trigger: GTCCATGGAGTCATTTAAGCATGGGGCCTTGAGAGA...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTATCTCTACCCTGTGCTaGCCAGGCATTCAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISISTLC*PGIQRD
Trigger: GTCCCTTTGAATGCCTGGGCAGCACAGGGTAGAGAT...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATTCACACTGTTTAGATTaGACTTGCCAAATTTTGTGG +
Preference number: 4 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHSHCLD*TCQILW
Trigger: CCACAAAATTTGGCAAGTCCAATCTAAACAGTGTGA...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp AGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTGATGAATCCAGGACATaGGTATCTGACTTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: RDSPGSYLLIVYVRLHLPDESRT*VSDFLE
Trigger: TTCCAAAAAGTCAGATACCCATGTCCTGGATTCATC...AGGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATGCCAGCAATTTAGCTaGCAATGCAGCATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARCQQFS*QCSISL
Trigger: AAGGCTGATGCTGCATTGCCAGCTAAATTGCTGGCA...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCATCTACACCAGAATaGAAACAGAACTCAGATCTA +
Preference number: 4 (lower is better)
Translates to: FQGLSGILPANCLCASSPPSTPE*KQNSDL
Trigger: TAGATCTGAGTTCTGTTTTCATTCTGGTGTAGATGG...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCATCTGGTACTTTCCTTTaGCATTCACATCTGCTCCAC +
Preference number: 4 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNASGTFL*HSHLLH
Trigger: GTGGAGCAGATGTGAATGTCAAAGGAAAGTACCAGA...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTGATTACAGCATGCTGTTGCTaGGTGAGTAATTTATTCGTT +
Preference number: 4 (lower is better)
Translates to: NFQCCSITWHGRSSCLLITACCC*VSNLFV
Trigger: AACGAATAAATTACTCACTCAGCAACAGCATGCTGT...AATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR TCA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGTCTTCTTGTCACTACTaGTGTCTGAGTTACATGGCA +
Preference number: 4 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKSSCHY*CLSYMA
Trigger: TGCCATGTAACTCAGACATCAGTAGTGACAAGAAGA...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAATATGCACCACATCTCTaGTTGCTTTCAGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKYAPHL*LLSVFP
Trigger: TGGAAAAACTGAAAGCAAGCAGAGATGTGGTGCATA...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAATACAGCCTCTGTATaGACCACATCTCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNANTASV*TTSLLA
Trigger: AGCAAGCAGAGATGTGGTGCATACAGAGGCTGTATT...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAACTAGCTTCATGAAGTaGTGTCCACCCATCGTAACT +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARTSFMK*CPPIVT
Trigger: AGTTACGATGGGTGGACAGCACTTCATGAAGCTAGT...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR GCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATGGGCTAGGGAATCCTaGAATCCTTTTAATAGCTCC +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARWARES*NPFNSS
Trigger: GGAGCTATTAAAAGGATTGCAGGATTCCCTAGCCCA...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAAGACAGGAGAACCAATTaGTTTGTCATTGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKDRRTN*FVIVTD
Trigger: ATCTGTGACAATGACAAAGCAATTGGTTCTCCTGTC...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAAAAGAGAGCTCTGAGTaGTATCTGTGTGTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARKESSE*YLCVKQ
Trigger: CTGCTTCACACACAGATAGCACTCAGAGCTCTCTTT...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCATATGGGCTCATTTCCTaGAAGGTCTTCTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSYGLIS*KVFSPL
Trigger: AAGAGGAGAGAAGACCTTCCAGGAAATGAGCCCATA...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp AGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTTCCTTCTCCTTTCTTTaGTTAAGTTGTGAGGAATTG +
Preference number: 4 (lower is better)
Translates to: RDSPGSYLLIVYVRLHLPSFSFL*LSCEEL
Trigger: CAATTCCTCACAACTTAACCAAAGAAAGGAGAAGGA...AGGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGGTAAGAGCAGCAGGTTaGGATGATGATGCAATTTTC +
Preference number: 4 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKVRAAG*DDDAIF
Trigger: GAAAATTGCATCATCATCCCAACCTGCTGCTCTTAC...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTTCAGTTCTGCAGACATaGGCGCCTCTTCAGAAACAC +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISSVLQT*APLQKH
Trigger: GTGTTTCTGAAGAGGCGCCCATGTCTGCAGAACTGA...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAAGAGATGGCATTTTCATaGGTCAATGTTTGTAACCTA +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKEMAFS*VNVCNL
Trigger: TAGGTTACAAACATTGACTCATGAAAATGCCATCTC...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR TCA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAAGAGTCTCCATAGATaGATCTTTGGCCTCATCCAA +
Preference number: 4 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNAKSLHR*IFGLIQ
Trigger: TTGGATGAGGCCAAAGATTCATCTATGGAGACTCTT...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCACATGCTGTTGCTGAGTaGGTAATTTATTCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNAHAVAE*VIYSFS
Trigger: GGAGAACGAATAAATTACTCACTCAGCAACAGCATG...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAATCTTTGGTTAAGTTGTaGGGAATTGGCCAATTCTTT +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKSLVKL*GIGQFF
Trigger: AAAGAATTGGCCAATTCCTCACAACTTAACCAAAGA...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAGTGCTGAACAACTCTTaGGGATTGAAGTCATCCATT +
Preference number: 4 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNAVLNNS*GLKSSI
Trigger: AATGGATGACTTCAATCCTCAAGAGTTGTTCAGCAC...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp AACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTGATTTTCTTGTCAGTGTCTTaGTTCCTTTCCAAACTATGT +
Preference number: 4 (lower is better)
Translates to: NFQCCSITWHGRSSCLLIFLSVS*FLSKLC
Trigger: ACATAGTTTGGAAAGGAAGCAAGACACTGACAAGAA...AATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR GCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAATTCTTGTCAGTGTCTTaGTTCCTTTCCAAACTATGT +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKFLSVS*FLSKLC
Trigger: ACATAGTTTGGAAAGGAAGCAAGACACTGACAAGAA...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAATCAAGTCTTTCAGCTaGACAGCTTTCTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSIKSFS*TAFFLG
Trigger: TCCCAGAAAGAAAGCTGTGCAGCTGAAAGACTTGAT...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCAGAACTTGATTTTGTaGTGTTTTATCCTGAGGATC +
Preference number: 4 (lower is better)
Translates to: FQGLSGILPANCLCASSPQNLIL*CFILRI
Trigger: GATCCTCAGGATAAAACAGCACAAAATCAAGTTCTG...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTACCTGTGTTGACAGCTaGCAGCAATTTAGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISTCVDS*QQFSWQ
Trigger: TTGCCAGCTAAATTGCTGGCAGCTGTCAACACAGGT...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCATGCAGGGGAGTAATCTaGTACTTTCCTTTGACATTC +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSCRGVI*YFPLTF
Trigger: GAATGTCAAAGGAAAGTACCAGATTACTCCCCTGCA...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAAACTTGCCAAATTTTGTaGTATTGGAATCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKTCQIL*YWNLSG
Trigger: GCCAGAAAGATTCCAATACCACAAAATTTGGCAAGT...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAAGGGTATCTGACTTTTTaGAAACTAAACAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKGYLTF*KLNKPH
Trigger: ATGAGGCTTGTTTAGTTTCCAAAAAGTCAGATACCC...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTTGTTTGGGCCTTTCTTaGTATAATTCTTGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: FQGLSGILPANCLCASSPCLGLS*YNSCQC
Trigger: ACACTGACAAGAATTATACCAAGAAAGGCCCAAACA...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp AGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTCAAATGTTAATCTTCTaGCTCTCACTCTCTATTTCA +
Preference number: 4 (lower is better)
Translates to: RDSPGSYLLIVYVRLHLPQMLIF*LSLSIS
Trigger: TGAAATAGAGAGTGAGAGCCAGAAGATTAACATTTG...AGGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAGTAAGAGCAGCAGGTTaGGATGATGATGCAATTTTC +
Preference number: 4 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNAVRAAG*DDDAIF
Trigger: GAAAATTGCATCATCATCCCAACCTGCTGCTCTTAC...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGACCATCTACACCAGAATaGAAACAGAACTCAGATCTA +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARPSTPE*KQNSDL
Trigger: TAGATCTGAGTTCTGTTTTCATTCTGGTGTAGATGG...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAACAGCATGCTGTTGCTaGGTGAGTAATTTATTCGTT +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARTACCC*VSNLFV
Trigger: AACGAATAAATTACTCACTCAGCAACAGCATGCTGT...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAATATCACAAGGACTGTaGGTTTCAGAGTCCATGTTT +
Preference number: 4 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNAISQGL*VSESMF
Trigger: AAACATGGACTCTGAAACTCACAGTCCTTGTGATAT...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAGAATGTATGCCTTTCTaGATTCCATCTACACCAGAA +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARECMPF*IPSTPE
Trigger: TTCTGGTGTAGATGGAATGCAGAAAGGCATACATTC...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCATATGCACCACATCTCTaGTTGCTTTCAGTTTTTCCA +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSYAPHL*LLSVFP
Trigger: TGGAAAAACTGAAAGCAAGCAGAGATGTGGTGCATA...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CACATAGAACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTTTGAATCCGGATGAATaGATATTCTTCCTTTTACTG +
Preference number: 4 (lower is better)
Translates to: HIELPMLLHYMAWQKLLLLNPDE*IFFLLL
Trigger: CAGTAAAAGGAAGAATATGCATTCATCCGGATTCAA...AAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTTCTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR GCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAGACAGGAGAACCAATTaGTTTGTCATTGTCACAGAT +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSDRRTN*FVIVTD
Trigger: ATCTGTGACAATGACAAAGCAATTGGTTCTCCTGTC...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAACGAGGAGTTTCCTGTaGTATTTGTGTACAATCTTC +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSTRSFL*YLCTIF
Trigger: GAAGATTGTACACAAATAGCACAGGAAACTCCTCGT...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAGATGAATCCAGGACATaGGTATCTGACTTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARDESRT*VSDFLE
Trigger: TTCCAAAAAGTCAGATACCCATGTCCTGGATTCATC...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAAAACTTTGCTCAGTTTTaGCATATGAGTTACCAAAAG +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKNFAQF*HMSYQK
Trigger: CTTTTGGTAACTCATATGCCAAAACTGAGCAAAGTT...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGTGTTTGGGCCTTTCTTaGTATAATTCTTGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKCLGLS*YNSCQC
Trigger: ACACTGACAAGAATTATACCAAGAAAGGCCCAAACA...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAAAATCTGTATTATTTATaGGCTCATTTCCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKNLYYL*AHFLEG
Trigger: ACCTTCCAGGAAATGAGCCCATAAATAATACAGATT...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGTCCTTCTCCTTTCTTTaGTTAAGTTGTGAGGAATTG +
Preference number: 4 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKSFSFL*LSCEEL
Trigger: CAATTCCTCACAACTTAACCAAAGAAAGGAGAAGGA...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATCTTTGGTTAAGTTGTaGGGAATTGGCCAATTCTTT +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARSLVKL*GIGQFF
Trigger: AAAGAATTGGCCAATTCCTCACAACTTAACCAAAGA...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTCATGAAACTTCAGGGTaGGGAAATGACACTGTGAAT +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISHETSG*GNDTVN
Trigger: ATTCACAGTGTCATTTCCTCACCCTGAAGTTTCATG...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR TCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAACAACTCTTGAGGATTaGAGTCATCCATTACTTCAA +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSTTLED*SHPLLQ
Trigger: TTGAAGTAATGGATGACTTCAATCCTCAAGAGTTGT...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAACCAACACCAGATACTaGTGTAGCATTCTTATAGTT +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSTNTRY*CSILIV
Trigger: AACTATAAGAATGCTACAGCAGTATCTGGTGTTGGT...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAACTTGCCAAATTTTGTaGTATTGGAATCTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSTCQIL*YWNLSG
Trigger: GCCAGAAAGATTCCAATACCACAAAATTTGGCAAGT...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATCACACTGTTTAGATTaGACTTGCCAAATTTTGTGG +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARSHCLD*TCQILW
Trigger: CCACAAAATTTGGCAAGTCCAATCTAAACAGTGTGA...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAGGGTATCTGACTTTTTaGAAACTAAACAAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSGYLTF*KLNKPH
Trigger: ATGAGGCTTGTTTAGTTTCCAAAAAGTCAGATACCC...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCACCCAAGGTACAATCCTaGACATTTTGTTTGGAATTT +
Preference number: 4 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNAPKVQS*TFCLEF
Trigger: AAATTCCAAACAAAATGTCCAGGATTGTACCTTGGG...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGACCCAAGGTACAATCCTaGACATTTTGTTTGGAATTT +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARPKVQS*TFCLEF
Trigger: AAATTCCAAACAAAATGTCCAGGATTGTACCTTGGG...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAAGCAGTCTTTCTTCTTaGGTACATTCTGATGATTCT +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARSSLSS*VHSDDS
Trigger: AGAATCATCAGAATGTACCCAAGAAGAAAGACTGCT...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCATTGAATCCGGATGAATaGATATTCTTCCTTTTACTG +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSLNPDE*IFFLLL
Trigger: CAGTAAAAGGAAGAATATGCATTCATCCGGATTCAA...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATGTTTAGATTGGACTTaGCAAATTTTGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARCLDWT*QILWYW
Trigger: CCAATACCACAAAATTTGGCAAGTCCAATCTAAACA...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTACTAGCTTCATGAAGTaGTGTCCACCCATTCTTTTT +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISTSFMK*CPPILF
Trigger: AAAAAGAATGGGTGGACAGCACTTCATGAAGCTAGT...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAAACTTTGCTCAGTTTTaGCATATGAGTTACCAAAAG +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSNFAQF*HMSYQK
Trigger: CTTTTGGTAACTCATATGCCAAAACTGAGCAAAGTT...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAAATCTGTATTATTTATaGGCTCATTTCCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSNLYYL*AHFLEG
Trigger: ACCTTCCAGGAAATGAGCCCATAAATAATACAGATT...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTCAAGATGTAGAACTTTaGTCAGTTTTGGCATATGAG +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISQDVEL*SVLAYE
Trigger: CTCATATGCCAAAACTGAGCAAAGTTCTACATCTTG...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR GCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTTGTTTAGATTGGACTTaGCAAATTTTGTGGTATTGG +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISCLDWT*QILWYW
Trigger: CCAATACCACAAAATTTGGCAAGTCCAATCTAAACA...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTTTTGCTCATAAGAGATaGCATTTTCATGAGTCAATG +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISFAHKR*HFHESM
Trigger: CATTGACTCATGAAAATGCCATCTCTTATGAGCAAA...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR CCA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTCAAATGTTAATCTTCTaGCTCTCACTCTCTATTTCA +
Preference number: 4 (lower is better)
Translates to: PNRNCHSYTGRNAECKISQMLIF*LSLSIS
Trigger: TGAAATAGAGAGTGAGAGCCAGAAGATTAACATTTG...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 90 bp AGAGGTGAGGCTGGTGGAGCTGAGGTGGGTTCAGTTCTGCAGACATaGGCGCCTCTTCAGAAACACACTTCACAAGTTCCCTTCCAAGGT +
Preference number: 5 (lower is better)
Translates to: RGEAGGAEVGSVLQT*APLQKHTSQVPFQG
Trigger: ACCTTGGAAGGGAACTTGTGAAGTGTGTTTCTGAAGAGGCGCCCATGTCTGCAGAACTGAACCCACCTCAGCTCCACCAGCCTCACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS TCA 90 bp ATGGGCAGACGCAGAGGAAAGAGAGCTCTGAGTGCTATCTGTGTGTaGAGCAGCAGCAGCGGAGTCTCTAAGACATGGCAGTGTCTGATG +
Preference number: 5 (lower is better)
Translates to: MGRRRGKRALSAICV*SSSSGVSKTWQCLM
Trigger: CATCAGACACTGCCATGTCTTAGAGACTCCGCTGCTGCTGCTTCACACACAGATAGCACTCAGAGCTCTCTTTCCTCTGCGTCTGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 90 bp AAGCATCCATTTCCACCACTAACACTGCTGCTTTTCTCTTGTCCTTaGCAGCTGGGTCCCACATCAGCACCTGTGTTGACAGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: KHPFPPLTLLLFSCP*QLGPTSAPVLTAAS
Trigger: GCTGGCAGCTGTCAACACAGGTGCTGATGTGGGACCCAGCTGTCAAGGACAAGAGAAAAGCAGCAGTGTTAGTGGTGGAAATGGATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp AGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAGCTCCCGCAGATGGTaGCTGGGAAGCTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: RDSPGSYLLIVYVRLHLPSSRRW*LGSCLL
Trigger: AAGAAGACAGCTTCCCAGCAACCATCTGCGGGAGCT...AGGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAAAGCTCCCGCAGATGGTaGCTGGGAAGCTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKSSRRW*LGSCLL
Trigger: AAGAAGACAGCTTCCCAGCAACCATCTGCGGGAGCT...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCGGTTTTAGTAGGATGTaGATGGGCAGACGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: QGLSGILPANCLCASSPPGFSRM*MGRRRG
Trigger: TCCTCTGCGTCTGCCCATCAACATCCTACTAAAACC...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATGGTTTTAGTAGGATGTaGATGGGCAGACGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHGFSRM*MGRRRG
Trigger: TCCTCTGCGTCTGCCCATCAACATCCTACTAAAACC...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 90 bp GTCTTTCAGCTGCACAGCTTTCTTTCTGGGAGTTGTGTTGCGGTGTaGAACGGTTTTAGTAGGATGTTGATGGGCAGACGCAGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: VFQLHSFLSGSCVAV*NGFSRMLMGRRRGK
Trigger: CTTTCCTCTGCGTCTGCCCATCAACATCCTACTAAAACCGTTCCACACCGCAACACAACTCCCAGAAAGAAAGCTGTGCAGCTGAAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 90 bp GGTCACATAACTGCCACCTCCCAGGAGCTCCTTGAGCCAGGTGACTaGGTTCTGGTAAATCTGACCATTTTCTCCCTTAAGTTTACCACT +
Preference number: 5 (lower is better)
Translates to: GHITATSQELLEPGD*VLVNLTIFSLKFTT
Trigger: AGTGGTAAACTTAAGGGAGAAAATGGTCAGATTTACCAGAACCCAGTCACCTGGCTCAAGGAGCTCCTGGGAGGTGGCAGTTATGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCGCACCACATCTCTGCTaGCTTTCAGTTTTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: QGLSGILPANCLCASSPPAPHLC*LSVFPV
Trigger: GACTGGAAAAACTGAAAGCAAGCAGAGATGTGGTGC...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTGGCTCCTGGCTCTTCTaGTCACTACTGATGTCTGAG +
Preference number: 5 (lower is better)
Translates to: FQGLSGILPANCLCASSPGSWLF*SLLMSE
Trigger: CTCAGACATCAGTAGTGACAAGAAGAGCCAGGAGCC...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 90 bp TGGCTCATGCCTTCTTTTGGAGATGCTATGGACTTGTCCAAGGTGTaGCAATCACTATCACTGTCAGCAGAGCGTCCCTTTATGAAGGAG +
Preference number: 5 (lower is better)
Translates to: WLMPSFGDAMDLSKV*QSLSLSAERPFMKE
Trigger: CTCCTTCATAAAGGGACGCTCTGCTGACAGTGATAGTGATTGCCACACCTTGGACAAGTCCATAGCATCTCCAAAAGAAGGCATGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 90 bp TCTCTTTTATCTGTAGATAATGAGGGATGGTTTGCATCGACTCTCTaGAAGTACCTGAGAGGTGAGGCTGGTGGAGCTGAGGTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: SLLSVDNEGWFASTL*KYLRGEAGGAEVGS
Trigger: TGAACCCACCTCAGCTCCACCAGCCTCACCTCTCAGGTACTTCCAGAGAGTCGATGCAAACCATCCCTCATTATCTACAGATAAAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCGAGAATGAACAACTGTaGGTAAAGGGCGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: QGLSGILPANCLCASSPPENEQL*VKGDLK
Trigger: CTTCAAGTCGCCCTTTACCAACAGTTGTTCATTCTC...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCGGACAGGAGAACCAATaGCTTTGTCATTGTCACAGA +
Preference number: 5 (lower is better)
Translates to: QGLSGILPANCLCASSPPGQENQ*LCHCHR
Trigger: TCTGTGACAATGACAAAGCAATTGGTTCTCCTGTCC...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCATAATGAGGGATGGTTaGCATCGACTCTCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: QGLSGILPANCLCASSPPIMRDG*HRLSGS
Trigger: ACTTCCAGAGAGTCGATGCAAACCATCCCTCATTAT...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 90 bp TCTCTTCGTGATGATCATGGCTCATGCCTTCTTTTGGAGATGCTATaGACTTGTCCAAGGTGTGGCAATCACTATCACTGTCAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: SLRDDHGSCLLLEML*TCPRCGNHYHCQQS
Trigger: GCTCTGCTGACAGTGATAGTGATTGCCACACCTTGGACAAGTCCATAGCATCTCCAAAAGAAGGCATGAGCCATGATCATCACGAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCGCTACTATATTGCTCTaGGTTAGTGTGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: QGLSGILPANCLCASSPPATILL*VSVRLL
Trigger: CAACAACCTCACACTAACCAAGAGCAATATAGTAGC...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAAGTTGTGTTCACGCCTaGGCTGCAGGGAGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARSCVHA*AAGSFQ
Trigger: TTGAAAGCTCCCTGCAGCCAAGGCGTGAACACAACT...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAGGCTCCTGGCTCTTCTaGTCACTACTGATGTCTGAG +
Preference number: 5 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARGSWLF*SLLMSE
Trigger: CTCAGACATCAGTAGTGACAAGAAGAGCCAGGAGCC...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CCACATAGAACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTCAAATCCACAGCCTTaGACTGTAGCTTCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: PHRTSNAAPLHGMAEAPASNPQP*TVASAC
Trigger: ACAAGCAGAAGCTACAGTCAAAGGCTGTGGATTTGA...AGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTTCTATGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR CAA 90 bp AGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTATAATGAGGGATGGTTaGCATCGACTCTCTGGAAGT +
Preference number: 5 (lower is better)
Translates to: RDSPGSYLLIVYVRLHLPIMRDG*HRLSGS
Trigger: ACTTCCAGAGAGTCGATGCAAACCATCCCTCATTAT...AGGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAACTGCTGCTTTTCTCTaGTCCTTGACAGCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARTAAFL*SLTAGS
Trigger: GGACCCAGCTGTCAAGGACAAGAGAAAAGCAGCAGT...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp AGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTATATGGGCTACTATATaGCTCTTGGTTAGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: RDSPGSYLLIVYVRLHLPIWATI*LLVSVR
Trigger: CCTCACACTAACCAAGAGCAATATAGTAGCCCATAT...AGGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAGGCGACTTGAAGAACTaGTGTTTGGGCCTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARGDLKN*CLGLSW
Trigger: CCAAGAAAGGCCCAAACACAAGTTCTTCAAGTCGCC...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CACATAGAACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGAGAATGAACAACTGTaGGTAAAGGGCGACTTGAAG +
Preference number: 5 (lower is better)
Translates to: HIELPMLLHYMAWQKLLLENEQL*VKGDLK
Trigger: CTTCAAGTCGCCCTTTACCAACAGTTGTTCATTCTC...AAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTTCTATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR CAA 90 bp AGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTGTCTTTTCTGTGTTCTaGGATATCACAAGGACTGTG +
Preference number: 5 (lower is better)
Translates to: RDSPGSYLLIVYVRLHLPVFSVF*DITRTV
Trigger: CACAGTCCTTGTGATATCCAAGAACACAGAAAAGAC...AGGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTTCAAATCCACAGCCTTaGACTGTAGCTTCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: FQGLSGILPANCLCASSPSNPQP*TVASAC
Trigger: ACAAGCAGAAGCTACAGTCAAAGGCTGTGGATTTGA...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 90 bp AATCCACAGCCTTTGACTGTAGCTTCTGCTTGTGAGTTTTCTGCGTaGGGAGTAAGAGCAGCAGGTTGGGATGATGATGCAATTTTCTCA +
Preference number: 5 (lower is better)
Translates to: NPQPLTVASACEFSA*GVRAAGWDDDAIFS
Trigger: TGAGAAAATTGCATCATCATCCCAACCTGCTGCTCTTACTCCTCACGCAGAAAACTCACAAGCAGAAGCTACAGTCAAAGGCTGTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 90 bp ACACGAGGAGTTTCCTGTGCTATTTGTGTACAATCTTCATCTACCTaGGACATGATGGGCTGCACTGCTAAGCATCCATTTCCACCACTA +
Preference number: 5 (lower is better)
Translates to: TRGVSCAICVQSSST*DMMGCTAKHPFPPL
Trigger: TAGTGGTGGAAATGGATGCTTAGCAGTGCAGCCCATCATGTCTCAGGTAGATGAAGATTGTACACAAATAGCACAGGAAACTCCTCGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCAGCACCACATCTCTGCTaGCTTTCAGTTTTTCCAGTC +
Preference number: 5 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSAPHLC*LSVFPV
Trigger: GACTGGAAAAACTGAAAGCAAGCAGAGATGTGGTGC...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CACATAGAACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTATCTGGTACTTTCCTTaGACATTCACATCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: HIELPMLLHYMAWQKLLLIWYFP*TFTSAP
Trigger: TGGAGCAGATGTGAATGTCAAAGGAAAGTACCAGAT...AAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTTCTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR CAA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCCTGTTTAGATTGGACTaGCCAAATTTTGTGGTATTG +
Preference number: 5 (lower is better)
Translates to: QGLSGILPANCLCASSPPLFRLD*PNFVVL
Trigger: CAATACCACAAAATTTGGCAAGTCCAATCTAAACAG...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATTTCACACTGTTTAGATaGGACTTGCCAAATTTTGTG +
Preference number: 5 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHFTLFR*DLPNFV
Trigger: CACAAAATTTGGCAAGTCCAATCTAAACAGTGTGAA...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTATATGGGCTACTATATaGCTCTTGGTTAGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: FQGLSGILPANCLCASSPIWATI*LLVSVR
Trigger: CCTCACACTAACCAAGAGCAATATAGTAGCCCATAT...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TGCAGGTTAAGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATTTGAAGAACTTGTGTTaGGGCCTTTCTTGGTATAAT +
Preference number: 5 (lower is better)
Translates to: CRLRYAHHASWRFRAGDHLKNLC*GLSWYN
Trigger: ATTATACCAAGAAAGGCCCAAACACAAGTTCTTCAA...ATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCTTAACCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTGTCTTTTCTGTGTTCTaGGATATCACAAGGACTGTG +
Preference number: 5 (lower is better)
Translates to: FQGLSGILPANCLCASSPVFSVF*DITRTV
Trigger: CACAGTCCTTGTGATATCCAAGAACACAGAAAAGAC...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTAGTTGTGTTCACGCCTaGGCTGCAGGGAGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: PNRNCHSYTGRNAECKISSCVHA*AAGSFQ
Trigger: TTGAAAGCTCCCTGCAGCCAAGGCGTGAACACAACT...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAACATCAGCACCTGTGTaGACAGCTGCCAGCAATTTA +
Preference number: 5 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARTSAPV*TAASNL
Trigger: TAAATTGCTGGCAGCTGTCAACACAGGTGCTGATGT...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCAGTTTCCTGTGCTATTaGTGTACAATCTTCATCTAC +
Preference number: 5 (lower is better)
Translates to: QGLSGILPANCLCASSPPSFLCY*CTIFIY
Trigger: GTAGATGAAGATTGTACACAAATAGCACAGGAAACT...GGGAGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS CCA 90 bp ACAAATGTTAATCTTCTGGCTCTCACTCTCTATTTCAGGAGACAATaGTATTTCTTGCATGCTTCCGTAAGCCAGACTGACAGGAGCGAG +
Preference number: 5 (lower is better)
Translates to: TNVNLLALTLYFRRQ*YFLHASVSQTDRSE
Trigger: CTCGCTCCTGTCAGTCTGGCTTACGGAAGCATGCAAGAAATACCATTGTCTCCTGAAATAGAGAGTGAGAGCCAGAAGATTAACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CCACATAGAACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTCTGTTTAGATTGGACTaGCCAAATTTTGTGGTATTG +
Preference number: 5 (lower is better)
Translates to: PHRTSNAAPLHGMAEAPALFRLD*PNFVVL
Trigger: CAATACCACAAAATTTGGCAAGTCCAATCTAAACAG...AGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTTCTATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR CAA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAATGGGTATCTGACTTTTaGGAAACTAAACAAGCCTCA +
Preference number: 5 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKWVSDF*ETKQAS
Trigger: TGAGGCTTGTTTAGTTTCCAAAAAGTCAGATACCCA...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGTTGGTTAGTGTGAGGTaGTTGATGTGTAGTTACAGG +
Preference number: 5 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKLVSVR*LMCSYR
Trigger: CCTGTAACTACACATCAACAACCTCACACTAACCAA...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CCACATAGAACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTGAACTTTGCTCAGTTTaGGCATATGAGTTACCAAAA +
Preference number: 5 (lower is better)
Translates to: PHRTSNAAPLHGMAEAPAELCSV*AYELPK
Trigger: TTTTGGTAACTCATATGCCAAAACTGAGCAAAGTTC...AGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTTCTATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR CAA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTGGCGACTTGAAGAACTaGTGTTTGGGCCTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: PNRNCHSYTGRNAECKISGDLKN*CLGLSW
Trigger: CCAAGAAAGGCCCAAACACAAGTTCTTCAAGTCGCC...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTCTCCTGCTTGCTGATTaGAAGTATCTCTTTTATCTG +
Preference number: 5 (lower is better)
Translates to: FQGLSGILPANCLCASSPLLLAD*KYLFYL
Trigger: CAGATAAAAGAGATACTTCAAATCAGCAAGCAGGAG...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS TCA 90 bp TTAGGGTTTGCTCCATGTTCTAAGAGTATCTCAGCTGCCTTTAAATaGTTCCCCGCAGAAGCACCATGTAAAGGCACAATCCCATCTATA +
Preference number: 5 (lower is better)
Translates to: LGFAPCSKSISAAFK*FPAEAPCKGTIPSI
Trigger: TATAGATGGGATTGTGCCTTTACATGGTGCTTCTGCGGGGAATCATTTAAAGGCAGCTGAGATACTCTTAGAACATGGAGCAAACCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAATCTGGTACTTTCCTTaGACATTCACATCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNAIWYFP*TFTSAP
Trigger: TGGAGCAGATGTGAATGTCAAAGGAAAGTACCAGAT...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCATTGGTTAGTGTGAGGTaGTTGATGTGTAGTTACAGG +
Preference number: 5 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSLVSVR*LMCSYR
Trigger: CCTGTAACTACACATCAACAACCTCACACTAACCAA...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TTCACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAGCTACTATATTGCTCTaGGTTAGTGTGAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: FTSLTGTVTHTQVEMLNAATILL*VSVRLL
Trigger: CAACAACCTCACACTAACCAAGAGCAATATAGTAGC...TGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp AACTTCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTGATTTTGAGAATCTACTTCTaGACCTGTCATTATCTCTTC +
Preference number: 5 (lower is better)
Translates to: NFQCCSITWHGRSSCLLILRIYF*TCHYLF
Trigger: GAAGAGATAATGACAGGTCAAGAAGTAGATTCTCAA...AATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS-3UTR CAA 90 bp TTCCAGGGACTCTCCGGGATCTTACCTGCTAATTGTTTATGTGCGTCTTCACCTGAACTTTGCTCAGTTTaGGCATATGAGTTACCAAAA +
Preference number: 5 (lower is better)
Translates to: FQGLSGILPANCLCASSPELCSV*AYELPK
Trigger: TTTTGGTAACTCATATGCCAAAACTGAGCAAAGTTC...AGGTGAAGACGCACATAAACAATTAGCAGGTAAGATCCCGGAGAGTCCCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp ACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAGTGAAACTTTCTGTGTaGAAGGTGGTCTTGTACAAG +
Preference number: 5 (lower is better)
Translates to: TSLTGTVTHTQVEMLNARVKLSV*KVVLYK
Trigger: CTTGTACAAGACCACCTTCAACACAGAAAGTTTCAC...TCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp AGGTATGCCCACCACGCGAGCTGGAGATTTAGAGCTGGAGATCATAAGAACAAATTGAAGAACTTGTGTTaGGGCCTTTCTTGGTATAAT +
Preference number: 5 (lower is better)
Translates to: RYAHHASWRFRAGDHKNKLKNLC*GLSWYN
Trigger: ATTATACCAAGAAAGGCCCAAACACAAGTTCTTCAA...TTTGTTCTTATGATCTCCAGCTCTAAATCTCCAGCTCGCGTGGTGGGCATACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CACCTCCCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGAATGCAGCATCAGCCTaGTTTTCTAGTTCATCTCTA +
Preference number: 5 (lower is better)
Translates to: HLPNRNCHSYTGRNAECKNAASA*FSSSSL
Trigger: TAGAGATGAACTAGAAAACAAGGCTGATGCTGCATT...CTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGGGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS TCA 90 bp TCCAATGCTGCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTaGTTTGAAGTATCTCTTTTATCTGTAGATAATGAGGGATGGTTT +
Preference number: 5 (lower is better)
Translates to: SNAAPLHGMAEAPAC*FEVSLLSVDNEGWF
Trigger: AAACCATCCCTCATTATCTACAGATAAAAGAGATACTTCAAATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGCAGCATTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTGGACAGGAGAACCAATaGCTTTGTCATTGTCACAGA +
Preference number: 5 (lower is better)
Translates to: PNRNCHSYTGRNAECKISGQENQ*LCHCHR
Trigger: TCTGTGACAATGACAAAGCAATTGGTTCTCCTGTCC...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTGCTCAGAAAGTGTGTTaGGTACTGCTAAGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PNRNCHSYTGRNAECKISAQKVC*VLLRSS
Trigger: TGAAGACCTTAGCAGTACCAAACACACTTTCTGAGC...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS TCA 90 bp TTATTATTTTGCTCTTGTGAGTCCTTTCTGAGCTTGAGTCCAAGTTaGATCTCGGGAGAATGTATGCCTTTCTGCATTCCATCTACACCA +
Preference number: 5 (lower is better)
Translates to: LLFCSCESFLSLSPS*ISGECMPFCIPSTP
Trigger: TGGTGTAGATGGAATGCAGAAAGGCATACATTCTCCCGAGATTCAACTTGGACTCAAGCTCAGAAAGGACTCACAAGAGCAAAATAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 90 bp CTGTTGGTAAAGGGCGACTTGAAGAACTTGTGTTTGGGCCTTTCTTaGTATAATTCTTGTCAGTGTCTTGCTTCCTTTCCAAACTATGTA +
Preference number: 5 (lower is better)
Translates to: LLVKGDLKNLCLGLS*YNSCQCLASFPNYV
Trigger: TACATAGTTTGGAAAGGAAGCAAGACACTGACAAGAATTATACCAAGAAAGGCCCAAACACAAGTTCTTCAAGTCGCCCTTTACCAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp TACCTGCTAATTGTTTATGTGCGTCTTCACCTCCCTAACAGGAACTGTCACTCATTGAGAATCTACTTCTaGACCTGTCATTATCTCTTC +
Preference number: 5 (lower is better)
Translates to: YLLIVYVRLHLPNRNCHSLRIYF*TCHYLF
Trigger: GAAGAGATAATGACAGGTCAAGAAGTAGATTCTCAA...TGAGTGACAGTTCCTGTTAGGGAGGTGAAGACGCACATAAACAATTAGCAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTGTGAAACTTTCTGTGTaGAAGGTGGTCTTGTACAAG +
Preference number: 5 (lower is better)
Translates to: PNRNCHSYTGRNAECKISVKLSV*KVVLYK
Trigger: CTTGTACAAGACCACCTTCAACACAGAAAGTTTCAC...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 90 bp CTCACTAAGAGCCAGCAACAACTTATTTTTATTATTTTGCTCTTGTaGGTCCTTTCTGAGCTTGAGTCCAAGTTGAATCTCGGGAGAATG +
Preference number: 5 (lower is better)
Translates to: LTKSQQQLIFIILLL*VLSELESKLNLGRM
Trigger: CATTCTCCCGAGATTCAACTTGGACTCAAGCTCAGAAAGGACTCACAAGAGCAAAATAATAAAAATAAGTTGTTGCTGGCTCTTAGTGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS GCA 90 bp GTGTTTGATAAAATCCTTTCTGGCTTCTTCAATACAGCCTCTGTATaGACCACATCTCTGCTTGCTTTCAGTTTTTCCAGTCTAGATGAT +
Preference number: 5 (lower is better)
Translates to: VFDKILSGFFNTASV*TTSLLAFSFSSLDD
Trigger: ATCATCTAGACTGGAAAAACTGAAAGCAAGCAGAGATGTGGTGCATACAGAGGCTGTATTGAAGAAGCCAGAAAGGATTTTATCAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTTGGGTATCTGACTTTTaGGAAACTAAACAAGCCTCA +
Preference number: 5 (lower is better)
Translates to: PNRNCHSYTGRNAECKISWVSDF*ETKQAS
Trigger: TGAGGCTTGTTTAGTTTCCAAAAAGTCAGATACCCA...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS-3UTR CAA 90 bp CCTAACAGGAACTGTCACTCATACACAGGTAGAAATGCTGAATGCAAGATTAGTTGGACTTGCCAAATTTaGTGGTATTGGAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: PNRNCHSYTGRNAECKISWTCQI*WYWNLS
Trigger: AGAAAGATTCCAATACCACAAAATTTGGCAAGTCCA...ACTAATCTTGCATTCAGCATTTCTACCTGTGTATGAGTGACAGTTCCTGTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 90 bp GAAGAAAGAATCTTCCCATTTATTAGTGGCTTTACCTTTTTCATTTaGGCTATTGTTTCCAAGGGACTTATATGGGCTACTATATTGCTC +
Preference number: 5 (lower is better)
Translates to: EERIFPFISGFTFFI*AIVSKGLIWATILL
Trigger: GAGCAATATAGTAGCCCATATAAGTCCCTTGGAAACAATAGCTCAAATGAAAAAGGTAAAGCCACTAATAAATGGGAAGATTCTTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 90 bp ATTGCTTTGTCATTGTCACAGATAAACTGCTTATATCTTTTTGGCTaGACAGTAGGAATTTTTACTAGATCTGTGGAGTTCCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: IALSLSQINCLYLFG*TVGIFTRSVEFLFS
Trigger: AGAGAAGAGGAACTCCACAGATCTAGTAAAAATTCCTACTGTTCAGCCAAAAAGATATAAGCAGTTTATCTGTGACAATGACAAAGCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 90 bp TTCGGCTATTTTTCACACTGTTTAGATTGGACTTGCCAAATTTTGTaGTATTGGAATCTTTCTGGCAATGTTCACATACATACTCTTTAC +
Preference number: 5 (lower is better)
Translates to: FGYFSHCLDWTCQIL*YWNLSGNVHIHTLY
Trigger: GTAAAGAGTATGTATGTGAACATTGCCAGAAAGATTCCAATACCACAAAATTTGGCAAGTCCAATCTAAACAGTGTGAAAAATAGCCGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS GCA 72 bp GAGGTGAGGCTGGTGGAGCTGAGGTGGGTTCAGTTCTaGAGACATGGGCGCCTCTTCAGAAACACACTTCAC +
Preference number: 6 (lower is better)
Translates to: EVRLVELRWVQF*RHGRLFRNTLH
Trigger: GTGAAGTGTGTTTCTGAAGAGGCGCCCATGTCTGCAGAACTGAACCCACCTCAGCTCCACCAGCCTCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS CCA 72 bp GCTGGTGGAGCTGAGGTGGGTTCAGTTCTGCAGACATaGGCGCCTCTTCAGAAACACACTTCACAAGTTCCC +
Preference number: 6 (lower is better)
Translates to: AGGAEVGSVLQT*APLQKHTSQVP
Trigger: GGGAACTTGTGAAGTGTGTTTCTGAAGAGGCGCCCATGTCTGCAGAACTGAACCCACCTCAGCTCCACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS TCA 72 bp ACAATGGTATTTCTTGCATGCTTCCGTAAGCCAGACTaGCAGGAGCGAGTAAGCCTGGCTGGGCATGTGCTG +
Preference number: 6 (lower is better)
Translates to: TMVFLACFRKPD*QERVSLAGHVL
Trigger: CAGCACATGCCCAGCCAGGCTTACTCGCTCCTGTCAGTCTGGCTTACGGAAGCATGCAAGAAATACCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 72 bp ACTGCCACCTCCCAGGAGCTCCTTGAGCCAGGTGACTaGGTTCTGGTAAATCTGACCATTTTCTCCCTTAAG +
Preference number: 6 (lower is better)
Translates to: TATSQELLEPGD*VLVNLTIFSLK
Trigger: CTTAAGGGAGAAAATGGTCAGATTTACCAGAACCCAGTCACCTGGCTCAAGGAGCTCCTGGGAGGTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS GCA 72 bp TCCCCCACTAGCTGCCTTGTGAAGGGGAGTCCAACCTaGATTATCTCTGAGATTCACATCTGCTCTAGCTTC +
Preference number: 6 (lower is better)
Translates to: SPTSCLVKGSPT*IISEIHICSSF
Trigger: GAAGCTAGAGCAGATGTGAATCTCAGAGATAATGCAGGTTGGACTCCCCTTCACAAGGCAGCTAGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 72 bp CTGCACAGCTTTCTTTCTGGGAGTTGTGTTGCGGTGTaGAACGGTTTTAGTAGGATGTTGATGGGCAGACGC +
Preference number: 6 (lower is better)
Translates to: LHSFLSGSCVAV*NGFSRMLMGRR
Trigger: GCGTCTGCCCATCAACATCCTACTAAAACCGTTCCACACCGCAACACAACTCCCAGAAAGAAAGCTGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 72 bp GCTGCCAGCAATTTAGCTGGCAATGCAGCATCAGCCTaGTTTTCTAGTTCATCTCTACCCTGTGCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: AASNLAGNAASA*FSSSSLPCAAQ
Trigger: CTGGGCAGCACAGGGTAGAGATGAACTAGAAAACAAGGCTGATGCTGCATTGCCAGCTAAATTGCTGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS CAA 72 bp GCATCCATTTCCACCACTAACACTGCTGCTTTTCTCTaGTCCTTGACAGCTGGGTCCCACATCAGCACCTGT +
Preference number: 6 (lower is better)
Translates to: ASISTTNTAAFL*SLTAGSHISTC
Trigger: ACAGGTGCTGATGTGGGACCCAGCTGTCAAGGACAAGAGAAAAGCAGCAGTGTTAGTGGTGGAAATGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS CAA 90 bp CTTTCTGGGAGTTGTGTTGCGGTGTGGAACGGTTTTAGTAGGATGTaGATGGGCAGACGCAGAGGAAAGAGAGCTCTGAGTGCTATCTGT +
Preference number: 6 (lower is better)
Translates to: LSGSCVAVWNGFSRM*MGRRRGKRALSAIC
Trigger: ACAGATAGCACTCAGAGCTCTCTTTCCTCTGCGTCTGCCCATCAACATCCTACTAAAACCGTTCCACACCGCAACACAACTCCCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 72 bp CGGGAAAGATTTCCTCCTCTGGCAGCCACATGGAGCTaGCTTTCTCCTTTCTTGTTCCTCTTACCGATTCCA +
Preference number: 6 (lower is better)
Translates to: RERFPPLAATWS*LSPFLFLLPIP
Trigger: TGGAATCGGTAAGAGGAACAAGAAAGGAGAAAGTCAGCTCCATGTGGCTGCCAGAGGAGGAAATCTTTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 72 bp TTTCCACCACTAACACTGCTGCTTTTCTCTTGTCCTTaGCAGCTGGGTCCCACATCAGCACCTGTGTTGACA +
Preference number: 6 (lower is better)
Translates to: FPPLTLLLFSCP*QLGPTSAPVLT
Trigger: TGTCAACACAGGTGCTGATGTGGGACCCAGCTGTCAAGGACAAGAGAAAAGCAGCAGTGTTAGTGGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS CAA 72 bp GCTGAGTCTCCCATAGTAGGAGGCTCCTGGCTCTTCTaGTCACTACTGATGTCTGAGTTACATGGCAGCTTT +
Preference number: 6 (lower is better)
Translates to: AESPIVGGSWLF*SLLMSELHGSF
Trigger: AAAGCTGCCATGTAACTCAGACATCAGTAGTGACAAGAAGAGCCAGGAGCCTCCTACTATGGGAGACTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 90 bp TGGGCATGTGCTGAGTCTCCCATAGTAGGAGGCTCCTGGCTCTTCTaGTCACTACTGATGTCTGAGTTACATGGCAGCTTTCTTAAACCA +
Preference number: 6 (lower is better)
Translates to: WACAESPIVGGSWLF*SLLMSELHGSFLKP
Trigger: TGGTTTAAGAAAGCTGCCATGTAACTCAGACATCAGTAGTGACAAGAAGAGCCAGGAGCCTCCTACTATGGGAGACTCAGCACATGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 90 bp GTGTTGACAGCTGCCAGCAATTTAGCTGGCAATGCAGCATCAGCCTaGTTTTCTAGTTCATCTCTACCCTGTGCTGCCCAGGCATTCAAA +
Preference number: 6 (lower is better)
Translates to: VLTAASNLAGNAASA*FSSSSLPCAAQAFK
Trigger: TTTGAATGCCTGGGCAGCACAGGGTAGAGATGAACTAGAAAACAAGGCTGATGCTGCATTGCCAGCTAAATTGCTGGCAGCTGTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS CCA 72 bp TGTCTGTTCATCACCGCATCATGCAGGGGAGTAATCTaGTACTTTCCTTTGACATTCACATCTGCTCCACCC +
Preference number: 6 (lower is better)
Translates to: CLFITASCRGVI*YFPLTFTSAPP
Trigger: GGGTGGAGCAGATGTGAATGTCAAAGGAAAGTACCAGATTACTCCCCTGCATGATGCGGTGATGAACAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 72 bp CCTTCTTTTGGAGATGCTATGGACTTGTCCAAGGTGTaGCAATCACTATCACTGTCAGCAGAGCGTCCCTTT +
Preference number: 6 (lower is better)
Translates to: PSFGDAMDLSKV*QSLSLSAERPF
Trigger: AAAGGGACGCTCTGCTGACAGTGATAGTGATTGCCACACCTTGGACAAGTCCATAGCATCTCCAAAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 72 bp GACTTTCTCCTTTCTTGTTCCTCTTACCGATTCCAGTaGTGTTCACGCCTTGGCTGCAGGGAGCTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: DFLLSCSSYRFQ*CSRLGCRELSK
Trigger: CTTTGAAAGCTCCCTGCAGCCAAGGCGTGAACACAACTGGAATCGGTAAGAGGAACAAGAAAGGAGAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 72 bp GCTCTCACTCTCTATTTCAGGAGACAATGGTATTTCTaGCATGCTTCCGTAAGCCAGACTGACAGGAGCGAG +
Preference number: 6 (lower is better)
Translates to: ALTLYFRRQWYF*HASVSQTDRSE
Trigger: CTCGCTCCTGTCAGTCTGGCTTACGGAAGCATGCAAGAAATACCATTGTCTCCTGAAATAGAGAGTGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 72 bp ATCAAATCCACAGCCTTTGACTGTAGCTTCTGCTTGTaGGTTTTCTGCGTGAGGAGTAAGAGCAGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: IKSTAFDCSFCL*VFCVRSKSSRL
Trigger: CAACCTGCTGCTCTTACTCCTCACGCAGAAAACTCACAAGCAGAAGCTACAGTCAAAGGCTGTGGATTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 72 bp TGCTCTTGTGAGTCCTTTCTGAGCTTGAGTCCAAGTTaGATCTCGGGAGAATGTATGCCTTTCTGCATTCCA +
Preference number: 6 (lower is better)
Translates to: CSCESFLSLSPS*ISGECMPFCIP
Trigger: TGGAATGCAGAAAGGCATACATTCTCCCGAGATTCAACTTGGACTCAAGCTCAGAAAGGACTCACAAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 72 bp ATGCACAGGAAGGCTCTCACTCTTCTTCGCTTTATGTaGAGGGACAGGAGAACCAATTGCTTTGTCATTGTC +
Preference number: 6 (lower is better)
Translates to: MHRKALTLLRFM*RDRRTNCFVIV
Trigger: GACAATGACAAAGCAATTGGTTCTCCTGTCCCTTCACATAAAGCGAAGAAGAGTGAGAGCCTTCCTGTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS GCA 72 bp GACCTGTCATTATCTCTTCGTGATGATCATGGCTCATaGCTTCTTTTGGAGATGCTATGGACTTGTCCAAGG +
Preference number: 6 (lower is better)
Translates to: DLSLSLRDDHGS*LLLEMLWTCPR
Trigger: CCTTGGACAAGTCCATAGCATCTCCAAAAGAAGGCATGAGCCATGATCATCACGAAGAGATAATGACAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 72 bp GATGATCATGGCTCATGCCTTCTTTTGGAGATGCTATaGACTTGTCCAAGGTGTGGCAATCACTATCACTGT +
Preference number: 6 (lower is better)
Translates to: DDHGSCLLLEML*TCPRCGNHYHC
Trigger: ACAGTGATAGTGATTGCCACACCTTGGACAAGTCCATAGCATCTCCAAAAGAAGGCATGAGCCATGATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 72 bp TCTGTGTTACTTCCTCTCCAGGCTCAGAAAGTGTGTTaGGTACTGCTAAGGTCTTCACTGGCTCTGTTAATC +
Preference number: 6 (lower is better)
Translates to: SVLLPLQAQKVC*VLLRSSLALLI
Trigger: GATTAACAGAGCCAGTGAAGACCTTAGCAGTACCAAACACACTTTCTGAGCCTGGAGAGGAAGTAACACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS CAA 90 bp CTGTTCATCACCGCATCATGCAGGGGAGTAATCTGGTACTTTCCTTaGACATTCACATCTGCTCCACCCTTTAATAGTTCACTTACTGCT +
Preference number: 6 (lower is better)
Translates to: LFITASCRGVIWYFP*TFTSAPPFNSSLTA
Trigger: AGCAGTAAGTGAACTATTAAAGGGTGGAGCAGATGTGAATGTCAAAGGAAAGTACCAGATTACTCCCCTGCATGATGCGGTGATGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 72 bp TTCTCTTCTATATCTTGTAGAATGGCGCTGATGGTCTaGTGCACAGGAAGGCTCTCACTCTTCTTCGCTTTA +
Preference number: 6 (lower is better)
Translates to: FSSISCRMALMV*CTGRLSLFFAL
Trigger: TAAAGCGAAGAAGAGTGAGAGCCTTCCTGTGCATCAGACCATCAGCGCCATTCTACAAGATATAGAAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 72 bp TCTGTAGATAATGAGGGATGGTTTGCATCGACTCTCTaGAAGTACCGTATTCCAAGCATAATTCCAGGTCAC +
Preference number: 6 (lower is better)
Translates to: SVDNEGWFASTL*KYRIPSIIPGH
Trigger: GTGACCTGGAATTATGCTTGGAATACGGTACTTCCAGAGAGTCGATGCAAACCATCCCTCATTATCTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS CAA 72 bp ACCGCATCATGCAGGGGAGTAATCTGGTACTTTCCTTaGACATTCACATCTGCTCCACCCTTTAATAGTTCA +
Preference number: 6 (lower is better)
Translates to: TASCRGVIWYFP*TFTSAPPFNSS
Trigger: TGAACTATTAAAGGGTGGAGCAGATGTGAATGTCAAAGGAAAGTACCAGATTACTCCCCTGCATGATGCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 72 bp CCAAACTATGTATACCAGCCTGATTTACTAAAGGACTaGAGTCTCTGTGGGCTAGGGAATCCTGCAATCCTT +
Preference number: 6 (lower is better)
Translates to: PNYVYQPDLLKD*SLCGLGNPAIL
Trigger: AAGGATTGCAGGATTCCCTAGCCCACAGAGACTCAAGTCCTTTAGTAAATCAGGCTGGTATACATAGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 72 bp CTTGTTCCTCTTACCGATTCCAGTTGTGTTCACGCCTaGGCTGCAGGGAGCTTTCAAAGAACATTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: LVPLTDSSCVHA*AAGSFQRTFSF
Trigger: AAAAGAAAATGTTCTTTGAAAGCTCCCTGCAGCCAAGGCGTGAACACAACTGGAATCGGTAAGAGGAACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 72 bp GAACCCAAGGAGTTGCTCAATGTGCTGAACAACTCTTaGGGATTGAAGTCATCCATTACTTCAAGCAGTCTT +
Preference number: 6 (lower is better)
Translates to: EPKELLNVLNNS*GLKSSITSSSL
Trigger: AAGACTGCTTGAAGTAATGGATGACTTCAATCCTCAAGAGTTGTTCAGCACATTGAGCAACTCCTTGGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS TCA 72 bp GTTTCCTGTGCTATTTGTGTACAATCTTCATCTACCTaGGACATGATGGGCTGCACTGCTAAGCATCCATTT +
Preference number: 6 (lower is better)
Translates to: VSCAICVQSSST*DMMGCTAKHPF
Trigger: AAATGGATGCTTAGCAGTGCAGCCCATCATGTCTCAGGTAGATGAAGATTGTACACAAATAGCACAGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS GCA 72 bp TGCTTGATAGTATCCTCCTATACTAGCTTCATGAAGTaGTGTCCACCCATCGTAACTTGGCTGATTGACATT +
Preference number: 6 (lower is better)
Translates to: CLIVSSYTSFMK*CPPIVTWLIDI
Trigger: AATGTCAATCAGCCAAGTTACGATGGGTGGACAGCACTTCATGAAGCTAGTATAGGAGGATACTATCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207464.2
CDS CCA 72 bp AAGGGCGACTTGAAGAACTTGTGTTTGGGCCTTTCTTaGTATAATTCTTGTCAGTGTCTTGCTTCCTTTCCA +
Preference number: 6 (lower is better)
Translates to: KGDLKNLCLGLS*YNSCQCLASFP
Trigger: TGGAAAGGAAGCAAGACACTGACAAGAATTATACCAAGAAAGGCCCAAACACAAGTTCTTCAAGTCGCCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 72 bp TTGTTCCTCTTACCGATTCCAGTTGTGTTCACGCCTTaGCTGCAGGGAGCTTTCAAAGAACATTTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: LFLLPIPVVFTP*LQGAFKEHFLF
Trigger: AAAAAGAAAATGTTCTTTGAAAGCTCCCTGCAGCCAAGGCGTGAACACAACTGGAATCGGTAAGAGGAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 72 bp CCCTTAAGTTTACCACTCGGTAAAACACTGGCTCTGTaGGTCGTCTCCTGTGTTTTAAATTCGAGAATGTTA +
Preference number: 6 (lower is better)
Translates to: PLSLPLGKTLAL*VVSCVLNSRML
Trigger: TAACATTCTCGAATTTAAAACACAGGAGACGACCCACAGAGCCAGTGTTTTACCGAGTGGTAAACTTAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 72 bp AGAACCCAAGGAGTTGCTCAATGTGCTGAACAACTCTaGAGGATTGAAGTCATCCATTACTTCAAGCAGTCT +
Preference number: 6 (lower is better)
Translates to: RTQGVAQCAEQL*RIEVIHYFKQS
Trigger: AGACTGCTTGAAGTAATGGATGACTTCAATCCTCAAGAGTTGTTCAGCACATTGAGCAACTCCTTGGGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS CAA 90 bp GCTTCCTTTCCAAACTATGTATACCAGCCTGATTTACTAAAGGACTaGAGTCTCTGTGGGCTAGGGAATCCTGCAATCCTTTTAATAGCT +
Preference number: 6 (lower is better)
Translates to: ASFPNYVYQPDLLKD*SLCGLGNPAILLIA
Trigger: AGCTATTAAAAGGATTGCAGGATTCCCTAGCCCACAGAGACTCAAGTCCTTTAGTAAATCAGGCTGGTATACATAGTTTGGAAAGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 72 bp GCTCCATTACATGGCATGGCAGAAGCTCCTGCTTGCTaGTTTGAAGTATCTCTTTTATCTGTAGATAATGAG +
Preference number: 6 (lower is better)
Translates to: APLHGMAEAPAC*FEVSLLSVDNE
Trigger: CTCATTATCTACAGATAAAAGAGATACTTCAAATCAGCAAGCAGGAGCTTCTGCCATGCCATGTAATGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208758.2
CDS CAA 72 bp GTTTCCAAGGGACTTATATGGGCTACTATATTGCTCTaGGTTAGTGTGAGGTTGTTGATGTGTAGTTACAGG +
Preference number: 6 (lower is better)
Translates to: VSKGLIWATILL*VSVRLLMCSYR
Trigger: CCTGTAACTACACATCAACAACCTCACACTAACCAAGAGCAATATAGTAGCCCATATAAGTCCCTTGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 72 bp TTGAGGAATATATTTCATAAGAAGAGTCTCCATAGATaGATCTTTGGCCTCATCCAAAGCACAGGTCCCATG +
Preference number: 6 (lower is better)
Translates to: LRNIFHKKSLHR*IFGLIQSTGPM
Trigger: CATGGGACCTGTGCTTTGGATGAGGCCAAAGATTCATCTATGGAGACTCTTCTTATGAAATATATTCCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 72 bp ATATATTTCATAAGAAGAGTCTCCATAGATGAATCTTaGGCCTCATCCAAAGCACAGGTCCCATGGTCACTT +
Preference number: 6 (lower is better)
Translates to: IYFIRRVSIDES*ASSKAQVPWSL
Trigger: AAGTGACCATGGGACCTGTGCTTTGGATGAGGCCAAAGATTCATCTATGGAGACTCTTCTTATGAAATATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 72 bp AATGAACAACTGTTGGTAAAGGGCGACTTGAAGAACTaGTGTTTGGGCCTTTCTTGGTATAATTCTTGTCAG +
Preference number: 6 (lower is better)
Translates to: NEQLLVKGDLKN*CLGLSWYNSCQ
Trigger: CTGACAAGAATTATACCAAGAAAGGCCCAAACACAAGTTCTTCAAGTCGCCCTTTACCAACAGTTGTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 72 bp AGCCAGCAACAACTTATTTTTATTATTTTGCTCTTGTaGGTCCTTTCTGAGCTTGAGTCCAAGTTGAATCTC +
Preference number: 6 (lower is better)
Translates to: SQQQLIFIILLL*VLSELESKLNL
Trigger: GAGATTCAACTTGGACTCAAGCTCAGAAAGGACTCACAAGAGCAAAATAATAAAAATAAGTTGTTGCTGGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 72 bp GGTTTAGATCTTAATAACCCACCCAAGGTACAATCCTaGACATTTTGTTTGGAATTTATGTCATTTCCAGAG +
Preference number: 6 (lower is better)
Translates to: GLDLNNPPKVQS*TFCLEFMSFPE
Trigger: CTCTGGAAATGACATAAATTCCAAACAAAATGTCCAGGATTGTACCTTGGGTGGGTTATTAAGATCTAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 90 bp TTAGACACATTAGTTCGGCTATTTTTCACACTGTTTAGATTGGACTaGCCAAATTTTGTGGTATTGGAATCTTTCTGGCAATGTTCACAT +
Preference number: 6 (lower is better)
Translates to: LDTLVRLFFTLFRLD*PNFVVLESFWQCSH
Trigger: ATGTGAACATTGCCAGAAAGATTCCAATACCACAAAATTTGGCAAGTCCAATCTAAACAGTGTGAAAAATAGCCGAACTAATGTGTCTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS GCA 72 bp TGTGTTGAAGGTGGTCTTGTACAAGATGTAGAACTTTaGTCAGTTTTGGCATATGAGTTACCAAAAGAAATT +
Preference number: 6 (lower is better)
Translates to: CVEGGLVQDVEL*SVLAYELPKEI
Trigger: AATTTCTTTTGGTAACTCATATGCCAAAACTGAGCAAAGTTCTACATCTTGTACAAGACCACCTTCAACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 72 bp CACTGTTTAGATTGGACTTGCCAAATTTTGTGGTATTaGAATCTTTCTGGCAATGTTCACATACATACTCTT +
Preference number: 6 (lower is better)
Translates to: HCLDWTCQILWY*NLSGNVHIHTL
Trigger: AAGAGTATGTATGTGAACATTGCCAGAAAGATTCCAATACCACAAAATTTGGCAAGTCCAATCTAAACAGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 72 bp TTAGTTCGGCTATTTTTCACACTGTTTAGATTGGACTaGCCAAATTTTGTGGTATTGGAATCTTTCTGGCAA +
Preference number: 6 (lower is better)
Translates to: LVRLFFTLFRLD*PNFVVLESFWQ
Trigger: TTGCCAGAAAGATTCCAATACCACAAAATTTGGCAAGTCCAATCTAAACAGTGTGAAAAATAGCCGAACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CAA 72 bp GACACATTAGTTCGGCTATTTTTCACACTGTTTAGATaGGACTTGCCAAATTTTGTGGTATTGGAATCTTTC +
Preference number: 6 (lower is better)
Translates to: DTLVRLFFTLFR*DLPNFVVLESF
Trigger: GAAAGATTCCAATACCACAAAATTTGGCAAGTCCAATCTAAACAGTGTGAAAAATAGCCGAACTAATGTGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS TCA 72 bp TCATTGTCACAGATAAACTGCTTATATCTTTTTGGCTaGACAGTAGGAATTTTTACTAGATCTGTGGAGTTC +
Preference number: 6 (lower is better)
Translates to: SLSQINCLYLFG*TVGIFTRSVEF
Trigger: GAACTCCACAGATCTAGTAAAAATTCCTACTGTTCAGCCAAAAAGATATAAGCAGTTTATCTGTGACAATGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 72 bp TTTTCACACTGTTTAGATTGGACTTGCCAAATTTTGTaGTATTGGAATCTTTCTGGCAATGTTCACATACAT +
Preference number: 6 (lower is better)
Translates to: FSHCLDWTCQIL*YWNLSGNVHIH
Trigger: ATGTATGTGAACATTGCCAGAAAGATTCCAATACCACAAAATTTGGCAAGTCCAATCTAAACAGTGTGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2
CDS CCA 72 bp GGAATAAAAATCTGTATTATTTATGGGCTCATTTCCTaGAAGGTCTTCTCTCCTCTTTTCAGCTTTAGTTAT +
Preference number: 6 (lower is better)
Translates to: GIKICIIYGLIS*KVFSPLFSFSY
Trigger: ATAACTAAAGCTGAAAAGAGGAGAGAAGACCTTCCAGGAAATGAGCCCATAAATAATACAGATTTTTATTCC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000207464.2
ENSMUST00000208758.2