RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD29 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057766

Ensembl transcript IDs: ENSMUST00000118525.9, ENSMUST00000122408.8, ENSMUST00000142066.2, ENSMUST00000234183.2, ENSMUST00000234212.2, ENSMUST00000234405.2

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCTCTATGACATCGTTATACCCTTTGTTGGCTGCTTTCAGCAATaGTGTCGTACCATCGTTGCGAGCAGCGTCACGGTCAGCTCCCCG +
Preference number: 1 (lower is better)
Translates to: LLYDIVIPFVGCFQQ*CRTIVASSVTVSSP
Trigger: CGGGGAGCTGACCGTGACGCTGCTCGCAACGATGGTACGACAGCATTGCTGAAAGCAGCCAACAAAGGGTATAACGATGTCATAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR TCA 90 bp CTGAGGAGGAGGACTCTTTACACGGAGGCCAGTGTAGTTAAAGGTTaGGTGAGTACCTTGTTTCTCAACGCTGGATCTGCCCCTGCTTCC +
Preference number: 1 (lower is better)
Translates to: LRRRTLYTEASVVKG*VSTLFLNAGSAPAS
Trigger: GGAAGCAGGGGCAGATCCAGCGTTGAGAAACAAGGTACTCACTCAACCTTTAACTACACTGGCCTCCGTGTAAAGAGTCCTCCTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR GCA 90 bp GAATTTGAGCAGCTCCTCTATGACATCGTTATACCCTTTGTTGGCTaGTTTCAGCAATGCTGTCGTACCATCGTTGCGAGCAGCGTCACG +
Preference number: 1 (lower is better)
Translates to: EFEQLLYDIVIPFVG*FQQCCRTIVASSVT
Trigger: CGTGACGCTGCTCGCAACGATGGTACGACAGCATTGCTGAAAGCAGCCAACAAAGGGTATAACGATGTCATAGAGGAGCTGCTCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR GCA 90 bp TTCCAGGAGCAGGGCAACCGTTTTAACATTCCCACTGAGCACTGCTaGATGGAGAGCCGAAGTCCCATTCTTCAAAATACCAAGAGTAGG +
Preference number: 1 (lower is better)
Translates to: FQEQGNRFNIPTEHC*MESRSPILQNTKSR
Trigger: CCTACTCTTGGTATTTTGAAGAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAATGTTAAAACGGTTGCCCTGCTCCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR GCA 90 bp TGCTTCCAGGAGCAGGGCAACCGTTTTAACATTCCCACTGAGCACTaGTGCATGGAGAGCCGAAGTCCCATTCTTCAAAATACCAAGAGT +
Preference number: 1 (lower is better)
Translates to: CFQEQGNRFNIPTEH*CMESRSPILQNTKS
Trigger: ACTCTTGGTATTTTGAAGAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAATGTTAAAACGGTTGCCCTGCTCCTGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR CCA 90 bp AGGAGCAGGGCAACCGTTTTAACATTCCCACTGAGCACTGCTGCATaGAGAGCCGAAGTCCCATTCTTCAAAATACCAAGAGTAGGTGAG +
Preference number: 1 (lower is better)
Translates to: RSRATVLTFPLSTAA*RAEVPFFKIPRVGE
Trigger: CTCACCTACTCTTGGTATTTTGAAGAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAATGTTAAAACGGTTGCCCTGCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR GCA 90 bp CCCTTACTGTGTGTAACTATGAAAATCGAGGCAGAGTCTGTGAGATaGCTTCTGAGGAGGAGGACTCTTTACACGGAGGCCAGTGTAGTT +
Preference number: 1 (lower is better)
Translates to: PLLCVTMKIEAESVR*LLRRRTLYTEASVV
Trigger: AACTACACTGGCCTCCGTGTAAAGAGTCCTCCTCCTCAGAAGGCATCTCACAGACTCTGCCTCGATTTTCATAGTTACACACAGTAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR GCA 90 bp CCACTAATGGTTTATGTCCTACTGGGGGATTCTGCATGCTATGCATaGACACTGCAACTGAGCTACATCCCCATGCCCAATGTTTGCACA +
Preference number: 1 (lower is better)
Translates to: PLMVYVLLGDSACYA*TLQLSYIPMPNVCT
Trigger: TGTGCAAACATTGGGCATGGGGATGTAGCTCAGTTGCAGTGTGCATGCATAGCATGCAGAATCCCCCAGTAGGACATAAACCATTAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR TCA 90 bp CAGGACTTTACACAGAGACTACTGGTTGGGACCTGGAGCATAGTATaGGCTAGAGTAGTGGATATGTGTTTAAACATGAAAGTACTATTA +
Preference number: 1 (lower is better)
Translates to: QDFTQRLLVGTWSIV*ARVVDMCLNMKVLL
Trigger: TAATAGTACTTTCATGTTTAAACACATATCCACTACTCTAGCTCATACTATGCTCCAGGTCCCAACCAGTAGTCTCTGTGTAAAGTCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR GCA 90 bp TATGAAAATCGAGGCAGAGTCTGTGAGATGCCTTCTGAGGAGGAGGACTCTTTACCCACTGAGCACTGCTaGATGGAGAGCCGAAGTCCC +
Preference number: 2 (lower is better)
Translates to: YENRGRVCEMPSEEEDSLPTEHC*MESRSP
Trigger: GGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGG...TAAAGAGTCCTCCTCCTCAGAAGGCATCTCACAGACTCTGCCTCGATTTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR CAA 90 bp GGTGAGAATTTGAGCAGCTCCTCTATGACATCGTTATACCCTTTGTaGGCTGCTTTCAGCAATGCTGTCGTACCATCGTTGCGAGCAGCG +
Preference number: 2 (lower is better)
Translates to: GENLSSSSMTSLYPL*AAFSNAVVPSLRAA
Trigger: CGCTGCTCGCAACGATGGTACGACAGCATTGCTGAAAGCAGCCAACAAAGGGTATAACGATGTCATAGAGGAGCTGCTCAAATTCTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR CAA 90 bp AGTGCTGTGGGAAGTGCCAGATTCCCCAGCATATTGTGTCCTTGCTaGTGCCTTGGAAATTGGACTCCAGACCATACAACCAGAGTCAAA +
Preference number: 2 (lower is better)
Translates to: SAVGSARFPSILCPC*CLGNWTPDHTTRVK
Trigger: TTTGACTCTGGTTGTATGGTCTGGAGTCCAATTTCCAAGGCACAAGCAAGGACACAATATGCTGGGGAATCTGGCACTTCCCACAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR CAA 90 bp GTAGGTGAGAATTTGAGCAGCTCCTCTATGACATCGTTATACCCTTaGTTGGCTGCTTTCAGCAATGCTGTCGTACCATCGTTGCGAGCA +
Preference number: 2 (lower is better)
Translates to: VGENLSSSSMTSLYP*LAAFSNAVVPSLRA
Trigger: TGCTCGCAACGATGGTACGACAGCATTGCTGAAAGCAGCCAACAAAGGGTATAACGATGTCATAGAGGAGCTGCTCAAATTCTCACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR-3UTR TCA 90 bp GTTTTAACATTCCCACTGAGCACTGCTGCATGGAGAGCCGAAGTCCCATTCTTCAATACCAAGAGTAGGTaGGAATTTGAGCAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: VLTFPLSTAAWRAEVPFFNTKSR*EFEQLL
Trigger: GAGGAGCTGCTCAAATTCTCACCTACTCTTGGTATT...GAAGAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAATGTTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR-3UTR GCA 90 bp TGTTCAGTTTTTGGTAGGTTCTTACCCAACTTCCCTGCCACGGATAACATCATAGGTCAGTGCACAGTGTaGAAACCCACAGGGCAGACA +
Preference number: 2 (lower is better)
Translates to: CSVFGRFLPNFPATDNIIGQCTV*KPTGQT
Trigger: TGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACC...TATGATGTTATCCGTGGCAGGGAAGTTGGGTAAGAACCTACCAAAAACTGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR GCA 90 bp CCATTGCTTATGTATACACTGGTTCACAAGAACCATGACTCTGATCTTTGGGTGGGTCAGTGCACAGTGTaGAAACCCACAGGGCAGACA +
Preference number: 2 (lower is better)
Translates to: PLLMYTLVHKNHDSDLWVGQCTV*KPTGQT
Trigger: TGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACC...CACCCAAAGATCAGAGTCATGGTTCTTGTGAACCAGTGTATACATAAGCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
3UTR-3UTR CCA 90 bp CCATTGCTTATGTATACACTGGTTCACAAGAACCATGACTCTGATCTTTGGGTGGTAAATAAAGGGAAGTaGACCCTGAGCCGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: PLLMYTLVHKNHDSDLWVVNKGK*TLSRPG
Trigger: CCCAGGACGGCTCAGGGTCCACTTCCCTTTATTTAC...CACCCAAAGATCAGAGTCATGGTTCTTGTGAACCAGTGTATACATAAGCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
3UTR CAA 90 bp GCAGTTAGGCACCAACAGAGGCAATTAGACACCATTGGAAGTGCATaGAGCATCAACTTTAGACCCTCCTCAAACAGTTTGGTGAACTTG +
Preference number: 2 (lower is better)
Translates to: AVRHQQRQLDTIGSA*SINFRPSSNSLVNL
Trigger: CAAGTTCACCAAACTGTTTGAGGAGGGTCTAAAGTTGATGCTCAATGCACTTCCAATGGTGTCTAATTGCCTCTGTTGGTGCCTAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR GCA 90 bp TATGAAAATCGAGGCAGAGTCTGTGAGATGCCTTCTGAGGAGGAGGACTCTTTAATACCCTTTGTTGGCTaGTTTCAGCAATGCTGTCGT +
Preference number: 2 (lower is better)
Translates to: YENRGRVCEMPSEEEDSLIPFVG*FQQCCR
Trigger: ACGACAGCATTGCTGAAAGCAGCCAACAAAGGGTAT...TAAAGAGTCCTCCTCCTCAGAAGGCATCTCACAGACTCTGCCTCGATTTTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR-3UTR CCA 90 bp GAAGGAAGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACTCAGAGACAGTGCTGTaGGAAGTGCCAGATTCCCCA +
Preference number: 2 (lower is better)
Translates to: EGRLISVYAVRHQQRQLDSETVL*EVPDSP
Trigger: TGGGGAATCTGGCACTTCCCACAGCACTGTCTCTGA...GTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCTTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR CAA 90 bp AGAGCCGAAGTCCCATTCTTCAAAATACCAAGAGTAGGTGAGAATTaGAGCAGCTCCTCTATGACATCGTTATACCCTTTGTTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: RAEVPFFKIPRVGEN*SSSSMTSLYPLLAA
Trigger: AGCAGCCAACAAAGGGTATAACGATGTCATAGAGGAGCTGCTCAAATTCTCACCTACTCTTGGTATTTTGAAGAATGGGACTTCGGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR CAA 90 bp CTCCAGACCATACAACCAGAGTCAAAGCTCAAAGAGACCTGTGTTTaGCAGATGTTGGGGTTTTCAATTCCCTATTGCTATCCTCATACA +
Preference number: 2 (lower is better)
Translates to: LQTIQPESKLKETCV*QMLGFSIPYCYPHT
Trigger: TGTATGAGGATAGCAATAGGGAATTGAAAACCCCAACATCTGCAAAACACAGGTCTCTTTGAGCTTTGACTCTGGTTGTATGGTCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR TCA 90 bp TGTTCAGTTTTTGGTAGGTTCTTACCCAACTTCCCTGCCACGGATAACATCATAGCTATCCTCATACATTaGCAATGTGGACTAGGAGAC +
Preference number: 2 (lower is better)
Translates to: CSVFGRFLPNFPATDNIIAILIH*QCGLGD
Trigger: GTCTCCTAGTCCACATTGTCAATGTATGAGGATAGC...TATGATGTTATCCGTGGCAGGGAAGTTGGGTAAGAACCTACCAAAAACTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR TCA 90 bp TGTTCAGTTTTTGGTAGGTTCTTACCCAACTTCCCTGCCACGGATAACATCATAACCTGGAGCATAGTATaGGCTAGAGTAGTGGATATG +
Preference number: 2 (lower is better)
Translates to: CSVFGRFLPNFPATDNIITWSIV*ARVVDM
Trigger: CATATCCACTACTCTAGCTCATACTATGCTCCAGGT...TATGATGTTATCCGTGGCAGGGAAGTTGGGTAAGAACCTACCAAAAACTGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR GCA 90 bp CAAGTCGCTAAGCATACATTAGTAATTTTCTTGAGCACATACTTACTGCCTTTCATTCCCACTGAGCACTaGTGCATGGAGAGCCGAAGT +
Preference number: 2 (lower is better)
Translates to: QVAKHTLVIFLSTYLLPFIPTEH*CMESRS
Trigger: ACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAAT...GAAAGGCAGTAAGTATGTGCTCAAGAAAATTACTAATGTATGCTTAGCGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR CAA 90 bp ATTGGAAGTGCATTGAGCATCAACTTTAGACCCTCCTCAAACAGTTaGGTGAACTTGTGGTTCTTTGCTGGAATCAATTCACCCATGAGT +
Preference number: 2 (lower is better)
Translates to: IGSALSINFRPSSNS*VNLWFFAGINSPMS
Trigger: ACTCATGGGTGAATTGATTCCAGCAAAGAACCACAAGTTCACCAAACTGTTTGAGGAGGGTCTAAAGTTGATGCTCAATGCACTTCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR CAA 90 bp ACACATTTTTCTGACCAAGTCGCTAAGCATACATTAGTAATTTTCTaGAGCACATACTTACTGCCTTTCATGGCCACCTCCTTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: THFSDQVAKHTLVIF*STYLLPFMATSFSL
Trigger: CAGGGAGAAGGAGGTGGCCATGAAAGGCAGTAAGTATGTGCTCAAGAAAATTACTAATGTATGCTTAGCGACTTGGTCAGAAAAATGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR CAA 90 bp GCATTGAGCATCAACTTTAGACCCTCCTCAAACAGTTTGGTGAACTaGTGGTTCTTTGCTGGAATCAATTCACCCATGAGTATGTATCAA +
Preference number: 2 (lower is better)
Translates to: ALSINFRPSSNSLVN*WFFAGINSPMSMYQ
Trigger: TTGATACATACTCATGGGTGAATTGATTCCAGCAAAGAACCACAAGTTCACCAAACTGTTTGAGGAGGGTCTAAAGTTGATGCTCAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR GCA 90 bp AGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACACCATTTTGTGTCCTTGCTTGTaGCTTGGAAATTGGACTCCA +
Preference number: 2 (lower is better)
Translates to: RLISVYAVRHQQRQLDTILCPCL*LGNWTP
Trigger: TGGAGTCCAATTTCCAAGGCACAAGCAAGGACACAA...AATGGTGTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR TCA 90 bp GCATACATTAGTAATTTTCTTGAGCACATACTTACTGCCTTTCATGGCCACCTCAGTGTAGTTAAAGGTTaGGTGAGTACCTTGTTTCTC +
Preference number: 2 (lower is better)
Translates to: AYISNFLEHILTAFHGHLSVVKG*VSTLFL
Trigger: GAGAAACAAGGTACTCACTCAACCTTTAACTACACT...GAGGTGGCCATGAAAGGCAGTAAGTATGTGCTCAAGAAAATTACTAATGTATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR-3UTR CCA 90 bp AGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACACCATTAGAACCATTTCTTTCTaGACACTGTGGCCTAAATTC +
Preference number: 2 (lower is better)
Translates to: RLISVYAVRHQQRQLDTIRTISF*TLWPKF
Trigger: GAATTTAGGCCACAGTGTCCAGAAAGAAATGGTTCT...AATGGTGTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR CCA 90 bp ATGTCCAACATGGAGCTGAACTTAGTTATCATAGTTGTAGATAGGTTTCTGTGGAGAACCATTTCTTTCTaGACACTGTGGCCTAAATTC +
Preference number: 2 (lower is better)
Translates to: MSNMELNLVIIVVDRFLWRTISF*TLWPKF
Trigger: GAATTTAGGCCACAGTGTCCAGAAAGAAATGGTTCT...CCACAGAAACCTATCTACAACTATGATAACTAAGTTCAGCTCCATGTTGGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
3UTR-3UTR CCA 90 bp GAAGGAAGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACGTGTTTTGCAGATGTTaGGGTTTTCAATTCCCTATT +
Preference number: 2 (lower is better)
Translates to: EGRLISVYAVRHQQRQLDVFCRC*GFQFPI
Trigger: AATAGGGAATTGAAAACCCCAACATCTGCAAAACAC...GTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCTTCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR GCA 90 bp AGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACACCATTGTAAATACTAACAACTaGCTTTACTATGGAGAGTCC +
Preference number: 2 (lower is better)
Translates to: RLISVYAVRHQQRQLDTIVNTNN*LYYGES
Trigger: GGACTCTCCATAGTAAAGGCAGTTGTTAGTATTTAC...AATGGTGTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR CCA 90 bp CACAAGAACCATGACTCTGATCTTTGGGTGATAAAAATACTTTACAATGAATGGTGCTTCATTGAAGGGTaGCCTCTGACTCTTAAAGAA +
Preference number: 2 (lower is better)
Translates to: HKNHDSDLWVIKILYNEWCFIEG*PLTLKE
Trigger: TTCTTTAAGAGTCAGAGGCCACCCTTCAATGAAGCA...CCATTCATTGTAAAGTATTTTTATCACCCAAAGATCAGAGTCATGGTTCTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
3UTR GCA 72 bp TGTTGGCTGCTTTCAGCAATGCTGTCGTACCATCGTTaGGAGCAGCGTCACGGTCAGCTCCCCGCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: CWLLSAMLSYHR*EQRHGQLPAAA
Trigger: TGCTGCTGCGGGGAGCTGACCGTGACGCTGCTCGCAACGATGGTACGACAGCATTGCTGAAAGCAGCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR CCA 72 bp GCCAGGAAGCCACACCACTGTAAGCTTCCGATCCCTTaGCTCCAGCTCCTGAGTACTGGCCTTAAAACTATG +
Preference number: 3 (lower is better)
Translates to: ARKPHHCKLPIP*LQLLSTGLKTM
Trigger: CATAGTTTTAAGGCCAGTACTCAGGAGCTGGAGCCAAGGGATCGGAAGCTTACAGTGGTGTGGCTTCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR GCA 72 bp GACATCGTTATACCCTTTGTTGGCTGCTTTCAGCAATaGTGTCGTACCATCGTTGCGAGCAGCGTCACGGTC +
Preference number: 3 (lower is better)
Translates to: DIVIPFVGCFQQ*CRTIVASSVTV
Trigger: GACCGTGACGCTGCTCGCAACGATGGTACGACAGCATTGCTGAAAGCAGCCAACAAAGGGTATAACGATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR GCA 72 bp AGTGAGTACCTTGTTTCTCAACGCTGGATCTGCCCCTaGTTCCAGGAGCAGGGCAACCGTTTTAACATTCCC +
Preference number: 3 (lower is better)
Translates to: SEYLVSQRWICP*FQEQGNRFNIP
Trigger: GGGAATGTTAAAACGGTTGCCCTGCTCCTGGAAGCAGGGGCAGATCCAGCGTTGAGAAACAAGGTACTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR CCA 72 bp TTTCATCCAGTGAGCTCACCGTCAGAGACAGTGCTGTaGGAAGTGCCAGATTCCCCAGCATATTGTGTCCTT +
Preference number: 3 (lower is better)
Translates to: FHPVSSPSETVL*EVPDSPAYCVL
Trigger: AAGGACACAATATGCTGGGGAATCTGGCACTTCCCACAGCACTGTCTCTGACGGTGAGCTCACTGGATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR GCA 72 bp CAGCTCCTCTATGACATCGTTATACCCTTTGTTGGCTaGTTTCAGCAATGCTGTCGTACCATCGTTGCGAGC +
Preference number: 3 (lower is better)
Translates to: QLLYDIVIPFVG*FQQCCRTIVAS
Trigger: GCTCGCAACGATGGTACGACAGCATTGCTGAAAGCAGCCAACAAAGGGTATAACGATGTCATAGAGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR GCA 72 bp CAGGGCAACCGTTTTAACATTCCCACTGAGCACTGCTaGATGGAGAGCCGAAGTCCCATTCTTCAAAATACC +
Preference number: 3 (lower is better)
Translates to: QGNRFNIPTEHC*MESRSPILQNT
Trigger: GGTATTTTGAAGAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAATGTTAAAACGGTTGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR GCA 72 bp GAGCAGGGCAACCGTTTTAACATTCCCACTGAGCACTaGTGCATGGAGAGCCGAAGTCCCATTCTTCAAAAT +
Preference number: 3 (lower is better)
Translates to: EQGNRFNIPTEH*CMESRSPILQN
Trigger: ATTTTGAAGAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAATGTTAAAACGGTTGCCCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR TCA 72 bp AGGACTCTTTACACGGAGGCCAGTGTAGTTAAAGGTTaGGTGAGTACCTTGTTTCTCAACGCTGGATCTGCC +
Preference number: 3 (lower is better)
Translates to: RTLYTEASVVKG*VSTLFLNAGSA
Trigger: GGCAGATCCAGCGTTGAGAAACAAGGTACTCACTCAACCTTTAACTACACTGGCCTCCGTGTAAAGAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR TCA 72 bp TGGGGGATTCTGCATGCTATGCATGCACACTGCAACTaGGCTACATCCCCATGCCCAATGTTTGCACATTTT +
Preference number: 3 (lower is better)
Translates to: WGILHAMHAHCN*ATSPCPMFAHF
Trigger: AAAATGTGCAAACATTGGGCATGGGGATGTAGCTCAGTTGCAGTGTGCATGCATAGCATGCAGAATCCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR-3UTR CAA 90 bp GTTTTAACATTCCCACTGAGCACTGCTGCATGGAGAGCCGAAGTCCCATTCTTCACATCGTTATACCCTTaGTTGGCTGCTTTCAGCAAT +
Preference number: 3 (lower is better)
Translates to: VLTFPLSTAAWRAEVPFFTSLYP*LAAFSN
Trigger: ATTGCTGAAAGCAGCCAACAAAGGGTATAACGATGT...GAAGAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAATGTTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR CCA 72 bp CCCAGCATATTGTGTCCTTGCTTGTGCCTTGGAAATTaGACTCCAGACCATACAACCAGAGTCAAAGCTCAA +
Preference number: 3 (lower is better)
Translates to: PSILCPCLCLGN*TPDHTTRVKAQ
Trigger: TTGAGCTTTGACTCTGGTTGTATGGTCTGGAGTCCAATTTCCAAGGCACAAGCAAGGACACAATATGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR CCA 72 bp CAGATTCCCCAGCATATTGTGTCCTTGCTTGTGCCTTaGAAATTGGACTCCAGACCATACAACCAGAGTCAA +
Preference number: 3 (lower is better)
Translates to: QIPQHIVSLLVP*KLDSRPYNQSQ
Trigger: TTGACTCTGGTTGTATGGTCTGGAGTCCAATTTCCAAGGCACAAGCAAGGACACAATATGCTGGGGAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR CCA 72 bp GCAACCGTTTTAACATTCCCACTGAGCACTGCTGCATaGAGAGCCGAAGTCCCATTCTTCAAAATACCAAGA +
Preference number: 3 (lower is better)
Translates to: ATVLTFPLSTAA*RAEVPFFKIPR
Trigger: TCTTGGTATTTTGAAGAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAATGTTAAAACGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR GCA 72 bp TGCAACCGGCATGCCCTTACTGTGTGTAACTATGAATaGAACCGGTATGCCTTTACTGTGTGTAACTATGAA +
Preference number: 3 (lower is better)
Translates to: CNRHALTVCNYE*NRYAFTVCNYE
Trigger: TTCATAGTTACACACAGTAAAGGCATACCGGTTGCATTCATAGTTACACACAGTAAGGGCATGCCGGTTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR-3UTR CAA 90 bp CCCTCCTCAAACAGTTTGGTGAACTTGTGGTTCTTTGCTGGAATCAATTCACCCGTTTTCAATTCCCTATaGCTATCCTCATACATTGAC +
Preference number: 3 (lower is better)
Translates to: PSSNSLVNLWFFAGINSPVFNSL*LSSYID
Trigger: GTCAATGTATGAGGATAGCAATAGGGAATTGAAAAC...GGGTGAATTGATTCCAGCAAAGAACCACAAGTTCACCAAACTGTTTGAGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR TCA 72 bp ACACAGAGACTACTGGTTGGGACCTGGAGCATAGTATaGGCTAGAGTAGTGGATATGTGTTTAAACATGAAA +
Preference number: 3 (lower is better)
Translates to: TQRLLVGTWSIV*ARVVDMCLNMK
Trigger: TTTCATGTTTAAACACATATCCACTACTCTAGCTCATACTATGCTCCAGGTCCCAACCAGTAGTCTCTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR GCA 72 bp GTATGTATCAATGAGCACCTGGTAAATACTAACAACTaGCTTTACTATGGAGAGTCCCCAGTAGTAACAGCA +
Preference number: 3 (lower is better)
Translates to: VCINEHLVNTNN*LYYGESPVVTA
Trigger: TGCTGTTACTACTGGGGACTCTCCATAGTAAAGGCAGTTGTTAGTATTTACCAGGTGCTCATTGATACATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR CCA 72 bp AACTTTAGACCCTCCTCAAACAGTTTGGTGAACTTGTaGTTCTTTGCTGGAATCAATTCACCCATGAGTATG +
Preference number: 3 (lower is better)
Translates to: NFRPSSNSLVNL*FFAGINSPMSM
Trigger: CATACTCATGGGTGAATTGATTCCAGCAAAGAACCACAAGTTCACCAAACTGTTTGAGGAGGGTCTAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR CAA 90 bp GAAGGAAGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACAAAGAGACCTGTGTTTaGCAGATGTTGGGGTTTTCA +
Preference number: 3 (lower is better)
Translates to: EGRLISVYAVRHQQRQLDKETCV*QMLGFS
Trigger: TGAAAACCCCAACATCTGCAAAACACAGGTCTCTTT...GTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCTTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR CAA 90 bp TGTTCAGTTTTTGGTAGGTTCTTACCCAACTTCCCTGCCACGGATAACATCATATGTATTTGCATAACTTaGCCAAGTAAAAGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: CSVFGRFLPNFPATDNIICICIT*PSKRLP
Trigger: TGGCAGCCTTTTACTTGGCAAAGTTATGCAAATACA...TATGATGTTATCCGTGGCAGGGAAGTTGGGTAAGAACCTACCAAAAACTGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR-3UTR CAA 90 bp TGTTCAGTTTTTGGTAGGTTCTTACCCAACTTCCCTGCCACGGATAACATCATACTCATAACACTGCATTaGGTTAAGCAAAACCTTCTT +
Preference number: 3 (lower is better)
Translates to: CSVFGRFLPNFPATDNIILITLH*VKQNLL
Trigger: AAGAAGGTTTTGCTTAACCAAATGCAGTGTTATGAG...TATGATGTTATCCGTGGCAGGGAAGTTGGGTAAGAACCTACCAAAAACTGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR CCA 72 bp AGTCAAAGCTCAAAGAGACCTGTGTTTTGCAGATGTTaGGGTTTTCAATTCCCTATTGCTATCCTCATACAT +
Preference number: 3 (lower is better)
Translates to: SQSSKRPVFCRC*GFQFPIAILIH
Trigger: ATGTATGAGGATAGCAATAGGGAATTGAAAACCCCAACATCTGCAAAACACAGGTCTCTTTGAGCTTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR TCA 72 bp TTCCCTGCCACGGATAACATCATAATTGCATCTAGATaGAATGCTAACCCAAATATCTGTTTCATACAGCAC +
Preference number: 3 (lower is better)
Translates to: FPATDNIIIASR*NANPNICFIQH
Trigger: GTGCTGTATGAAACAGATATTTGGGTTAGCATTTCATCTAGATGCAATTATGATGTTATCCGTGGCAGGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR GCA 72 bp AGCATAGCTACATTAAACACAAAAGTAAACATGTACTaGTTCATTGAAGGGTGGCCTCTGACTCTTAAAGAA +
Preference number: 3 (lower is better)
Translates to: SIATLNTKVNMY*FIEGWPLTLKE
Trigger: TTCTTTAAGAGTCAGAGGCCACCCTTCAATGAAGCAGTACATGTTTACTTTTGTGTTTAATGTAGCTATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp AAGCCCACTGTAAATAAAGGGAAGTGGACCCTGAGCCGTCCTGGGTCAGTGCACCGCACCACCTCGCTGTaGCCCATCTGGGAGGCGATC +
Preference number: 4 (lower is better)
Translates to: KPTVNKGKWTLSRPGSVHRTTSL*PIWEAI
Trigger: GATCGCCTCCCAGATGGGCCACAGCGAGGTGGTGCG...GTGCACTGACCCAGGACGGCTCAGGGTCCACTTCCCTTTATTTACAGTGGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp AATGCTGTCGTACCATCGTTGCGAGCAGCGTCACGGTCAGCTCCCCGCAGCAGCGCGCGGTTCCATCCTTaGCTGGTTGACTTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: NAVVPSLRAASRSAPRSSARFHP*LVDFCS
Trigger: GGAGCAAAAGTCAACCAGCCAAGGATGGAACCGCGC...GCTGCTGCGGGGAGCTGACCGTGACGCTGCTCGCAACGATGGTACGACAGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
3UTR CAA 72 bp TTGTTGGCTGCTTTCAGCAATGCTGTCGTACCATCGTaGCGAGCAGCGTCACGGTCAGCTCCCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LLAAFSNAVVPS*RAASRSAPRSS
Trigger: GCTGCTGCGGGGAGCTGACCGTGACGCTGCTCGCAACGATGGTACGACAGCATTGCTGAAAGCAGCCAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR GCA 90 bp AAGCCACACCACTGTAAGCTTCCGATCCCTTGGCTCCAGCTCCTGAGTACTGGCCAGCCAACAGGGCAGTaGCCCCATCTTTGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: KPHHCKLPIPWLQLLSTGQPTGQ*PHLWSD
Trigger: GTCGGACCAAAGATGGGGGCACTGCCCTGTTGGCTG...GCCAGTACTCAGGAGCTGGAGCCAAGGGATCGGAAGCTTACAGTGGTGTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR CCA 90 bp CCGTCCTGGGTCAGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCTCGCTGTGGCCCATCTaGGAGGCGATCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSWVSAQCANPQGRHSFFSLWPI*EAIHSG
Trigger: GCCACTGTGGATCGCCTCCCAGATGGGCCACAGCGA...GAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACCCAGGACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR TCA 90 bp CCGTCCTGGGTCAGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCGGCATGTGCCCATACTaGCTAGCAGCCAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSWVSAQCANPQGRHSFFGMCPY*LAANRA
Trigger: TGCCCTGTTGGCTGCTAGTCAGTATGGGCACATGCC...GAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACCCAGGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR GCA 90 bp CCGTCCTGGGTCAGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCTCTCAACGCTGGATCTaGCCCTGCTTCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSWVSAQCANPQGRHSFFSQRWI*PCFQEQ
Trigger: CTGCTCCTGGAAGCAGGGGCAGATCCAGCGTTGAGA...GAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACCCAGGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR TCA 90 bp TTGAGTGAGTACCTTGTTTCTCAACGCTGGATCTGCCCCTGCTTCCAGGAGCAGGGCATGTGCCCATACTaGCTAGCAGCCAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSEYLVSQRWICPCFQEQGMCPY*LAANRA
Trigger: TGCCCTGTTGGCTGCTAGTCAGTATGGGCACATGCC...CTGCTCCTGGAAGCAGGGGCAGATCCAGCGTTGAGAAACAAGGTACTCACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR TCA 90 bp CCGTCCTGGGTCAGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCCATAGGAGGCAACCATaGGAAGTGTGGTGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: PSWVSAQCANPQGRHSFFHRRQP*EVWCRA
Trigger: AGCACGGCACCACACTTCTCATGGTTGCCTCCTATG...GAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACCCAGGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp CCGTCCTGGGTCAGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCTCATTGTGGCCTTGCTaGGCAGCGAAGAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSWVSAQCANPQGRHSFFSLWPC*AAKNRA
Trigger: TGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGA...GAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACCCAGGACGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp AAGCCACACCACTGTAAGCTTCCGATCCCTTGGCTCCAGCTCCTGAGTACTGGCCAAGGTCTCCACCACTaGCATGTGCCCATACTGACT +
Preference number: 4 (lower is better)
Translates to: KPHHCKLPIPWLQLLSTGQGLHH*HVPILT
Trigger: AGTCAGTATGGGCACATGCCAGTGGTGGAGACCTTG...GCCAGTACTCAGGAGCTGGAGCCAAGGGATCGGAAGCTTACAGTGGTGTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR CCA 90 bp TTCCCACTGAGCACTGCTGCATGGAGAGCCGAAGTCCCATTCTTCAAAATACCATCGCTGTGGCCCATCTaGGAGGCGATCCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: FPLSTAAWRAEVPFFKIPSLWPI*EAIHSG
Trigger: GCCACTGTGGATCGCCTCCCAGATGGGCCACAGCGA...TGGTATTTTGAAGAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR TCA 90 bp AAGCCCACTGTAAATAAAGGGAAGTGGACCCTGAGCCGTCCTGGGTCAGTGCACACTCTCTCTGGAGGTTaGTGTCTGCTCCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: KPTVNKGKWTLSRPGSVHTLSGG*CLLPAE
Trigger: TTCTGCAGGGAGCAGACATCAACCTCCAGAGAGAGT...GTGCACTGACCCAGGACGGCTCAGGGTCCACTTCCCTTTATTTACAGTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR TCA 90 bp AAGCCCACTGTAAATAAAGGGAAGTGGACCCTGAGCCGTCCTGGGTCAGTGCACCAGGGCAGTTGTACCTaGCTCTCTCTGGAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: KPTVNKGKWTLSRPGSVHQGSCT*LSLEVD
Trigger: ATCAACCTCCAGAGAGAGTCAGGTACAACTGCCCTG...GTGCACTGACCCAGGACGGCTCAGGGTCCACTTCCCTTTATTTACAGTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR TCA 90 bp CCGTCCTGGGTCAGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCCAGGGCAGTTGTACCTaGCTCTCTCTGGAGGTTGAT +
Preference number: 4 (lower is better)
Translates to: PSWVSAQCANPQGRHSFFQGSCT*LSLEVD
Trigger: ATCAACCTCCAGAGAGAGTCAGGTACAACTGCCCTG...GAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACCCAGGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR TCA 90 bp AAGCCACACCACTGTAAGCTTCCGATCCCTTGGCTCCAGCTCCTGAGTACTGGCACAGCAGTAGTCGGATaGCATCCAAGTAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: KPHHCKLPIPWLQLLSTGTAVVG*HPSSHL
Trigger: AAGGTGGCTACTTGGATGTCATCCGACTACTGCTGT...GCCAGTACTCAGGAGCTGGAGCCAAGGGATCGGAAGCTTACAGTGGTGTGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR GCA 90 bp AAGCCCACTGTAAATAAAGGGAAGTGGACCCTGAGCCGTCCTGGGTCAGTGCACATTCCCACTGAGCACTaGTGCATGGAGAGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: KPTVNKGKWTLSRPGSVHIPTEH*CMESRS
Trigger: ACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAAT...GTGCACTGACCCAGGACGGCTCAGGGTCCACTTCCCTTTATTTACAGTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp CCGTCCTGGGTCAGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCCAAGGTCTCCACCACTaGCATGTGCCCATACTGACT +
Preference number: 4 (lower is better)
Translates to: PSWVSAQCANPQGRHSFFQGLHH*HVPILT
Trigger: AGTCAGTATGGGCACATGCCAGTGGTGGAGACCTTG...GAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACCCAGGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp AAGCCCACTGTAAATAAAGGGAAGTGGACCCTGAGCCGTCCTGGGTCAGTGCACCCATCCTGCCTTGGCTaGTTGACTTTTGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KPTVNKGKWTLSRPGSVHPSCLG*LTFAPE
Trigger: TTCAGGAGCAAAAGTCAACCAGCCAAGGCAGGATGG...GTGCACTGACCCAGGACGGCTCAGGGTCCACTTCCCTTTATTTACAGTGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp TTGGAAATTGGACTCCAGACCATACAACCAGAGTCAAAGCTCAAAGAGACCTGTGGAGGCGATCCACAGTaGCGCGGTTCCATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LEIGLQTIQPESKLKETCGGDPQ*RGSILP
Trigger: AGGCAGGATGGAACCGCGCCACTGTGGATCGCCTCC...ACAGGTCTCTTTGAGCTTTGACTCTGGTTGTATGGTCTGGAGTCCAATTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CCA 90 bp CAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTGTTAAGCGCACCACCTCGCTGTaGCCCATCTGGGAGGCGATC +
Preference number: 4 (lower is better)
Translates to: QCANPQGRHSFFISNIVKRTTSL*PIWEAI
Trigger: GATCGCCTCCCAGATGGGCCACAGCGAGGTGGTGCG...CTTAACAATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp GAAGTCCCATTCTTCAAAATACCAAGAGTAGGTGAGAATTTGAGCAGCTCCTCTCGCACCACCTCGCTGTaGCCCATCTGGGAGGCGATC +
Preference number: 4 (lower is better)
Translates to: EVPFFKIPRVGENLSSSSRTTSL*PIWEAI
Trigger: GATCGCCTCCCAGATGGGCCACAGCGAGGTGGTGCG...AGAGGAGCTGCTCAAATTCTCACCTACTCTTGGTATTTTGAAGAATGGGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR GCA 90 bp TTGGAAATTGGACTCCAGACCATACAACCAGAGTCAAAGCTCAAAGAGACCTGTCCCACTGAGCACTGCTaGATGGAGAGCCGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LEIGLQTIQPESKLKETCPTEHC*MESRSP
Trigger: GGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGG...ACAGGTCTCTTTGAGCTTTGACTCTGGTTGTATGGTCTGGAGTCCAATTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR TCA 90 bp TTGGAAATTGGACTCCAGACCATACAACCAGAGTCAAAGCTCAAAGAGACCTGTAGAAGTGTGGTGCCGTaGCTGTCTCTGCAGTCCACG +
Preference number: 4 (lower is better)
Translates to: LEIGLQTIQPESKLKETCRSVVP*LSLQST
Trigger: CGTGGACTGCAGAGACAGTCACGGCACCACACTTCT...ACAGGTCTCTTTGAGCTTTGACTCTGGTTGTATGGTCTGGAGTCCAATTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR TCA 90 bp TTGGAAATTGGACTCCAGACCATACAACCAGAGTCAAAGCTCAAAGAGACCTGTGGCATGTGCCCATACTaGCTAGCAGCCAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: LEIGLQTIQPESKLKETCGMCPY*LAANRA
Trigger: TGCCCTGTTGGCTGCTAGTCAGTATGGGCACATGCC...ACAGGTCTCTTTGAGCTTTGACTCTGGTTGTATGGTCTGGAGTCCAATTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR GCA 90 bp AGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTTCTCAACGCTGGATCTaGCCCTGCTTCCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SAQCANPQGRHSFFISNISQRWI*PCFQEQ
Trigger: CTGCTCCTGGAAGCAGGGGCAGATCCAGCGTTGAGA...AATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
3UTR CAA 72 bp GGAAGTGCCAGATTCCCCAGCATATTGTGTCCTTGCTaGTGCCTTGGAAATTGGACTCCAGACCATACAACC +
Preference number: 4 (lower is better)
Translates to: GSARFPSILCPC*CLGNWTPDHTT
Trigger: GGTTGTATGGTCTGGAGTCCAATTTCCAAGGCACAAGCAAGGACACAATATGCTGGGGAATCTGGCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR TCA 90 bp CCCTCCTCAAACAGTTTGGTGAACTTGTGGTTCTTTGCTGGAATCAATTCACCCACTCTCTCTGGAGGTTaGTGTCTGCTCCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: PSSNSLVNLWFFAGINSPTLSGG*CLLPAE
Trigger: TTCTGCAGGGAGCAGACATCAACCTCCAGAGAGAGT...GGGTGAATTGATTCCAGCAAAGAACCACAAGTTCACCAAACTGTTTGAGGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR GCA 90 bp GAACTTGTGGTTCTTTGCTGGAATCAATTCACCCATGAGTATGTATCAATGAGCTGCCGTGACTGTCTCTaGAGTCCACGTCCACACGGC +
Preference number: 4 (lower is better)
Translates to: ELVVLCWNQFTHEYVSMSCRDCL*SPRPHG
Trigger: GCCGTGTGGACGTGGACTGCAGAGACAGTCACGGCA...GCTCATTGATACATACTCATGGGTGAATTGATTCCAGCAAAGAACCACAAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR GCA 90 bp CCGTCCTGGGTCAGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCTTTTGTCTCAGGAGGTaGAGTATGCGTTCATTTTTG +
Preference number: 4 (lower is better)
Translates to: PSWVSAQCANPQGRHSFFFCLRR*SMRSFL
Trigger: CAAAAATGAACGCATACTGCACCTCCTGAGACAAAA...GAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACCCAGGACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp AGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTCTGAGCACTGCTGCATaGAGAGCCGAAGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: SAQCANPQGRHSFFISNILSTAA*RAEVPF
Trigger: GAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAG...AATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp TTCCCACTGAGCACTGCTGCATGGAGAGCCGAAGTCCCATTCTTCAAAATACCAGGTTCCATCCTTGGCTaGTTGACTTTTGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: FPLSTAAWRAEVPFFKIPGSILG*LTFAPE
Trigger: TTCAGGAGCAAAAGTCAACCAGCCAAGGATGGAACC...TGGTATTTTGAAGAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR TCA 90 bp ACATCGTTATACCCTTTGTTGGCTGCTTTCAGCAATGCTGTCGTACCATCGTTGCCATCCTTGGCTGGTTaGCTTTTGCTCCTGAAGACA +
Preference number: 4 (lower is better)
Translates to: TSLYPLLAAFSNAVVPSLPSLAG*LLLLKT
Trigger: TGTCTTCAGGAGCAAAAGTCAACCAGCCAAGGATGG...CAACGATGGTACGACAGCATTGCTGAAAGCAGCCAACAAAGGGTATAACGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR GCA 90 bp TTGGAAATTGGACTCCAGACCATACAACCAGAGTCAAAGCTCAAAGAGACCTGTGTTTCCCCTCTTTGCTaGCCAGAATGCAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: LEIGLQTIQPESKLKETCVSPLC*PECSIG
Trigger: GCCAATGCTGCATTCTGGGCAGCAAAGAGGGGAAAC...ACAGGTCTCTTTGAGCTTTGACTCTGGTTGTATGGTCTGGAGTCCAATTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CCA 90 bp CCATTGCTTATGTATACACTGGTTCACAAGAACCATGACTCTGATCTTTGGGTGTCATTGTGGCCTTGCTaGGCAGCGAAGAACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PLLMYTLVHKNHDSDLWVSLWPC*AAKNRA
Trigger: TGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGA...CACCCAAAGATCAGAGTCATGGTTCTTGTGAACCAGTGTATACATAAGCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp AGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTCAAGGTCTCCACCACTaGCATGTGCCCATACTGACT +
Preference number: 4 (lower is better)
Translates to: SAQCANPQGRHSFFISNIQGLHH*HVPILT
Trigger: AGTCAGTATGGGCACATGCCAGTGGTGGAGACCTTG...AATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp AGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTGGTTCCATCCTGCCTTaGCTGGTTGACTTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SAQCANPQGRHSFFISNIGSILP*LVDFCS
Trigger: GGAGCAAAAGTCAACCAGCCAAGGCAGGATGGAACC...AATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp ACTGAAATCATGTCCAACATGGAGCTGAACTTAGTTATCATAGTTGTAGATAGGGGAGGCGATCCACAGTaGCGCGGTTCCATCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TEIMSNMELNLVIIVVDRGGDPQ*RGSILP
Trigger: AGGCAGGATGGAACCGCGCCACTGTGGATCGCCTCC...CCTATCTACAACTATGATAACTAAGTTCAGCTCCATGTTGGACATGATTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp AGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTCTGCTGGGAGCTCATTaGCCTTGTTTCTCAACGCTG +
Preference number: 4 (lower is better)
Translates to: SAQCANPQGRHSFFISNILLGAH*PCFSTL
Trigger: CAGCGTTGAGAAACAAGGCCAATGAGCTCCCAGCAG...AATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR TCA 90 bp TGTTCAGTTTTTGGTAGGTTCTTACCCAACTTCCCTGCCACGGATAACATCATACCTGCCTTGGCTGGTTaGCTTTTGCTCCTGAAGACA +
Preference number: 4 (lower is better)
Translates to: CSVFGRFLPNFPATDNIIPALAG*LLLLKT
Trigger: TGTCTTCAGGAGCAAAAGTCAACCAGCCAAGGCAGG...TATGATGTTATCCGTGGCAGGGAAGTTGGGTAAGAACCTACCAAAAACTGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR GCA 90 bp CCATTGCTTATGTATACACTGGTTCACAAGAACCATGACTCTGATCTTTGGGTGCTTTGCTGCCCAGAATaGAGCATTGGCAAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: PLLMYTLVHKNHDSDLWVLCCPE*SIGKRS
Trigger: ACTCCGCTTGCCAATGCTGCATTCTGGGCAGCAAAG...CACCCAAAGATCAGAGTCATGGTTCTTGTGAACCAGTGTATACATAAGCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR GCA 90 bp ACTGAAATCATGTCCAACATGGAGCTGAACTTAGTTATCATAGTTGTAGATAGGCAGCCAACAGGGCAGTaGCCCCATCTTTGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: TEIMSNMELNLVIIVVDRQPTGQ*PHLWSD
Trigger: GTCGGACCAAAGATGGGGGCACTGCCCTGTTGGCTG...CCTATCTACAACTATGATAACTAAGTTCAGCTCCATGTTGGACATGATTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR GCA 90 bp ACTGAAATCATGTCCAACATGGAGCTGAACTTAGTTATCATAGTTGTAGATAGGCCCACTGAGCACTGCTaGATGGAGAGCCGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: TEIMSNMELNLVIIVVDRPTEHC*MESRSP
Trigger: GGGACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGG...CCTATCTACAACTATGATAACTAAGTTCAGCTCCATGTTGGACATGATTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp CAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTGTTAAGGTACCTGACTCTCTCTaGAGGTTGATGTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: QCANPQGRHSFFISNIVKVPDSL*RLMSAP
Trigger: GGGAGCAGACATCAACCTCCAGAGAGAGTCAGGTAC...CTTAACAATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp TATGAAAATCGAGGCAGAGTCTGTGAGATGCCTTCTGAGGAGGAGGACTCTTTAGTTGGTCATGGATGTTaGCTCCATGTTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: YENRGRVCEMPSEEEDSLVGHGC*LHVSAR
Trigger: CCTTGCTGAAACATGGAGCCAACATCCATGACCAAC...TAAAGAGTCCTCCTCCTCAGAAGGCATCTCACAGACTCTGCCTCGATTTTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR CCA 90 bp CAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTGTTAAGGGTTCCATCCTGCCTTaGCTGGTTGACTTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: QCANPQGRHSFFISNIVKGSILP*LVDFCS
Trigger: GGAGCAAAAGTCAACCAGCCAAGGCAGGATGGAACC...CTTAACAATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp CCATTGCTTATGTATACACTGGTTCACAAGAACCATGACTCTGATCTTTGGGTGCTTGTTTCTCAACGCTaGATCTGCCCCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PLLMYTLVHKNHDSDLWVLVSQR*ICPCFQ
Trigger: CTGGAAGCAGGGGCAGATCCAGCGTTGAGAAACAAG...CACCCAAAGATCAGAGTCATGGTTCTTGTGAACCAGTGTATACATAAGCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR GCA 90 bp GTTGTCAAACAGATGGATGTAGTAGCAAACTTTTGTAGTTCAGCTAAATGGATTCAGCCAACAGGGCAGTaGCCCCATCTTTGGTCCGAC +
Preference number: 4 (lower is better)
Translates to: VVKQMDVVANFCSSAKWIQPTGQ*PHLWSD
Trigger: GTCGGACCAAAGATGGGGGCACTGCCCTGTTGGCTG...AATCCATTTAGCTGAACTACAAAAGTTTGCTACTACATCCATCTGTTTGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CCA 90 bp GAAGGAAGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACCTCACAACATCATTGTaGCCTTGCTGGGCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: EGRLISVYAVRHQQRQLDLTTSL*PCWAAK
Trigger: CTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAG...GTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCTTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CCA 90 bp ATGTCCAACATGGAGCTGAACTTAGTTATCATAGTTGTAGATAGGTTTCTGTGGCTGAGCACTGCTGCATaGAGAGCCGAAGTCCCATTC +
Preference number: 4 (lower is better)
Translates to: MSNMELNLVIIVVDRFLWLSTAA*RAEVPF
Trigger: GAATGGGACTTCGGCTCTCCATGCAGCAGTGCTCAG...CCACAGAAACCTATCTACAACTATGATAACTAAGTTCAGCTCCATGTTGGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
3UTR CAA 72 bp AATTTGAGCAGCTCCTCTATGACATCGTTATACCCTTaGTTGGCTGCTTTCAGCAATGCTGTCGTACCATCG +
Preference number: 4 (lower is better)
Translates to: NLSSSSMTSLYP*LAAFSNAVVPS
Trigger: CGATGGTACGACAGCATTGCTGAAAGCAGCCAACAAAGGGTATAACGATGTCATAGAGGAGCTGCTCAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR TCA 90 bp GAAGGAAGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACACAGCAGTAGTCGGATaGCATCCAAGTAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: EGRLISVYAVRHQQRQLDTAVVG*HPSSHL
Trigger: AAGGTGGCTACTTGGATGTCATCCGACTACTGCTGT...GTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCTTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR GCA 90 bp AGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACACCATTCTGGAGGTTGATGTCTaGTCCCTGCAGAACAAGCTC +
Preference number: 4 (lower is better)
Translates to: RLISVYAVRHQQRQLDTILEVDV*SLQNKL
Trigger: GAGCTTGTTCTGCAGGGAGCAGACATCAACCTCCAG...AATGGTGTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CCA 90 bp ATGTCCAACATGGAGCTGAACTTAGTTATCATAGTTGTAGATAGGTTTCTGTGGCTCACAACATCATTGTaGCCTTGCTGGGCAGCGAAG +
Preference number: 4 (lower is better)
Translates to: MSNMELNLVIIVVDRFLWLTTSL*PCWAAK
Trigger: CTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAG...CCACAGAAACCTATCTACAACTATGATAACTAAGTTCAGCTCCATGTTGGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp GAGAATTTGAGCAGCTCCTCTATGACATCGTTATACCCTTTGTTGGCTGCTTTCTGGTCCGACATTCAGTaGATGCTCCAAATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: ENLSSSSMTSLYPLLAAFWSDIQ*MLQIQR
Trigger: TCTTTGGATTTGGAGCATCCACTGAATGTCGGACCA...GAAAGCAGCCAACAAAGGGTATAACGATGTCATAGAGGAGCTGCTCAAATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR CCA 90 bp AGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACACCATTCTTGTTTCTCAACGCTaGATCTGCCCCTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RLISVYAVRHQQRQLDTILVSQR*ICPCFQ
Trigger: CTGGAAGCAGGGGCAGATCCAGCGTTGAGAAACAAG...AATGGTGTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR TCA 90 bp CAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTGTTAAGAATACCAAGAGTAGGTaGGAATTTGAGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QCANPQGRHSFFISNIVKNTKSR*EFEQLL
Trigger: GAGGAGCTGCTCAAATTCTCACCTACTCTTGGTATT...CTTAACAATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR GCA 90 bp CCATTGCTTATGTATACACTGGTTCACAAGAACCATGACTCTGATCTTTGGGTGATACCCTTTGTTGGCTaGTTTCAGCAATGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: PLLMYTLVHKNHDSDLWVIPFVG*FQQCCR
Trigger: ACGACAGCATTGCTGAAAGCAGCCAACAAAGGGTAT...CACCCAAAGATCAGAGTCATGGTTCTTGTGAACCAGTGTATACATAAGCAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp ATGTCCAACATGGAGCTGAACTTAGTTATCATAGTTGTAGATAGGTTTCTGTGGCCCAGAATGCAGCATTaGCAAGCGGAGTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MSNMELNLVIIVVDRFLWPRMQH*QAEFPS
Trigger: AGAAGGAAACTCCGCTTGCCAATGCTGCATTCTGGG...CCACAGAAACCTATCTACAACTATGATAACTAAGTTCAGCTCCATGTTGGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CCA 90 bp GAACTTGTGGTTCTTTGCTGGAATCAATTCACCCATGAGTATGTATCAATGAGCGTTGGTCATGGATGTTaGCTCCATGTTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ELVVLCWNQFTHEYVSMSVGHGC*LHVSAR
Trigger: CCTTGCTGAAACATGGAGCCAACATCCATGACCAAC...GCTCATTGATACATACTCATGGGTGAATTGATTCCAGCAAAGAACCACAAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CCA 90 bp AGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTGTATGCGTTCATTTTTaGTTAGTTCTGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SAQCANPQGRHSFFISNIVCVHF*LVLLGA
Trigger: AGCTCCCAGCAGAACTAACCAAAAATGAACGCATAC...AATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp ACTGAAATCATGTCCAACATGGAGCTGAACTTAGTTATCATAGTTGTAGATAGGCTGCTGGGAGCTCATTaGCCTTGTTTCTCAACGCTG +
Preference number: 4 (lower is better)
Translates to: TEIMSNMELNLVIIVVDRLLGAH*PCFSTL
Trigger: CAGCGTTGAGAAACAAGGCCAATGAGCTCCCAGCAG...CCTATCTACAACTATGATAACTAAGTTCAGCTCCATGTTGGACATGATTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
3UTR CAA 72 bp ACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATaGTTAAGAACCATTTCTTTCTGGACACTGTGGCCT +
Preference number: 4 (lower is better)
Translates to: THRADILSSFPT*LRTISFWTLWP
Trigger: AGGCCACAGTGTCCAGAAAGAAATGGTTCTTAACAATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
3UTR CAA 72 bp TCTGACCAAGTCGCTAAGCATACATTAGTAATTTTCTaGAGCACATACTTACTGCCTTTCATGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SDQVAKHTLVIF*STYLLPFMATS
Trigger: GGAGGTGGCCATGAAAGGCAGTAAGTATGTGCTCAAGAAAATTACTAATGTATGCTTAGCGACTTGGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR TCA 90 bp CACAAGAACCATGACTCTGATCTTTGGGTGATAAAAATACTTTACAATGAATGGCCTGCCTTGGCTGGTTaGCTTTTGCTCCTGAAGACA +
Preference number: 4 (lower is better)
Translates to: HKNHDSDLWVIKILYNEWPALAG*LLLLKT
Trigger: TGTCTTCAGGAGCAAAAGTCAACCAGCCAAGGCAGG...CCATTCATTGTAAAGTATTTTTATCACCCAAAGATCAGAGTCATGGTTCTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR GCA 90 bp AGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTTTTTGTCTCAGGAGGTaGAGTATGCGTTCATTTTTG +
Preference number: 4 (lower is better)
Translates to: SAQCANPQGRHSFFISNIFCLRR*SMRSFL
Trigger: CAAAAATGAACGCATACTGCACCTCCTGAGACAAAA...AATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR GCA 90 bp GTTGTCAAACAGATGGATGTAGTAGCAAACTTTTGTAGTTCAGCTAAATGGATTATTCCCACTGAGCACTaGTGCATGGAGAGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: VVKQMDVVANFCSSAKWIIPTEH*CMESRS
Trigger: ACTTCGGCTCTCCATGCAGCAGTGCTCAGTGGGAAT...AATCCATTTAGCTGAACTACAAAAGTTTGCTACTACATCCATCTGTTTGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CCA 90 bp GTTGTCAAACAGATGGATGTAGTAGCAAACTTTTGTAGTTCAGCTAAATGGATTGTACCTGACTCTCTCTaGAGGTTGATGTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: VVKQMDVVANFCSSAKWIVPDSL*RLMSAP
Trigger: GGGAGCAGACATCAACCTCCAGAGAGAGTCAGGTAC...AATCCATTTAGCTGAACTACAAAAGTTTGCTACTACATCCATCTGTTTGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR CAA 72 bp ATCAACTTTAGACCCTCCTCAAACAGTTTGGTGAACTaGTGGTTCTTTGCTGGAATCAATTCACCCATGAGT +
Preference number: 4 (lower is better)
Translates to: INFRPSSNSLVN*WFFAGINSPMS
Trigger: ACTCATGGGTGAATTGATTCCAGCAAAGAACCACAAGTTCACCAAACTGTTTGAGGAGGGTCTAAAGTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR CAA 72 bp GCATTGAGCATCAACTTTAGACCCTCCTCAAACAGTTaGGTGAACTTGTGGTTCTTTGCTGGAATCAATTCA +
Preference number: 4 (lower is better)
Translates to: ALSINFRPSSNS*VNLWFFAGINS
Trigger: TGAATTGATTCCAGCAAAGAACCACAAGTTCACCAAACTGTTTGAGGAGGGTCTAAAGTTGATGCTCAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
3UTR CAA 72 bp GTCCCATTCTTCAAAATACCAAGAGTAGGTGAGAATTaGAGCAGCTCCTCTATGACATCGTTATACCCTTTG +
Preference number: 4 (lower is better)
Translates to: VPFFKIPRVGEN*SSSSMTSLYPL
Trigger: CAAAGGGTATAACGATGTCATAGAGGAGCTGCTCAAATTCTCACCTACTCTTGGTATTTTGAAGAATGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR TCA 90 bp CACAAGAACCATGACTCTGATCTTTGGGTGATAAAAATACTTTACAATGAATGGACAGCAGTAGTCGGATaGCATCCAAGTAGCCACCTT +
Preference number: 4 (lower is better)
Translates to: HKNHDSDLWVIKILYNEWTAVVG*HPSSHL
Trigger: AAGGTGGCTACTTGGATGTCATCCGACTACTGCTGT...CCATTCATTGTAAAGTATTTTTATCACCCAAAGATCAGAGTCATGGTTCTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR GCA 90 bp CACAAGAACCATGACTCTGATCTTTGGGTGATAAAAATACTTTACAATGAATGGCAGGTTTCCCCTCTTTaGTGCCCAGAATGCAGCATT +
Preference number: 4 (lower is better)
Translates to: HKNHDSDLWVIKILYNEWQVSPL*CPECSI
Trigger: AATGCTGCATTCTGGGCAGCAAAGAGGGGAAACCTG...CCATTCATTGTAAAGTATTTTTATCACCCAAAGATCAGAGTCATGGTTCTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CCA 90 bp CACAAGAACCATGACTCTGATCTTTGGGTGATAAAAATACTTTACAATGAATGGCCATCCTGCCTTGGCTaGTTGACTTTTGCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: HKNHDSDLWVIKILYNEWPSCLG*LTFAPE
Trigger: TTCAGGAGCAAAAGTCAACCAGCCAAGGCAGGATGG...CCATTCATTGTAAAGTATTTTTATCACCCAAAGATCAGAGTCATGGTTCTTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR GCA 90 bp ACTGAAATCATGTCCAACATGGAGCTGAACTTAGTTATCATAGTTGTAGATAGGATACCCTTTGTTGGCTaGTTTCAGCAATGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: TEIMSNMELNLVIIVVDRIPFVG*FQQCCR
Trigger: ACGACAGCATTGCTGAAAGCAGCCAACAAAGGGTAT...CCTATCTACAACTATGATAACTAAGTTCAGCTCCATGTTGGACATGATTTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp CACAAGAACCATGACTCTGATCTTTGGGTGATAAAAATACTTTACAATGAATGGGTTGGTCATGGATGTTaGCTCCATGTTTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: HKNHDSDLWVIKILYNEWVGHGC*LHVSAR
Trigger: CCTTGCTGAAACATGGAGCCAACATCCATGACCAAC...CCATTCATTGTAAAGTATTTTTATCACCCAAAGATCAGAGTCATGGTTCTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
3UTR CAA 72 bp ATACAACCAGAGTCAAAGCTCAAAGAGACCTGTGTTTaGCAGATGTTGGGGTTTTCAATTCCCTATTGCTAT +
Preference number: 4 (lower is better)
Translates to: IQPESKLKETCV*QMLGFSIPYCY
Trigger: ATAGCAATAGGGAATTGAAAACCCCAACATCTGCAAAACACAGGTCTCTTTGAGCTTTGACTCTGGTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR TCA 90 bp GTTGTCAAACAGATGGATGTAGTAGCAAACTTTTGTAGTTCAGCTAAATGGATTAATACCAAGAGTAGGTaGGAATTTGAGCAGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VVKQMDVVANFCSSAKWINTKSR*EFEQLL
Trigger: GAGGAGCTGCTCAAATTCTCACCTACTCTTGGTATT...AATCCATTTAGCTGAACTACAAAAGTTTGCTACTACATCCATCTGTTTGACAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CCA 90 bp CACAAGAACCATGACTCTGATCTTTGGGTGATAAAAATACTTTACAATGAATGGTGGTCCGACATTCAGTaGATGCTCCAAATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: HKNHDSDLWVIKILYNEWWSDIQ*MLQIQR
Trigger: TCTTTGGATTTGGAGCATCCACTGAATGTCGGACCA...CCATTCATTGTAAAGTATTTTTATCACCCAAAGATCAGAGTCATGGTTCTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CCA 90 bp CACAAGAACCATGACTCTGATCTTTGGGTGATAAAAATACTTTACAATGAATGGGTATGCGTTCATTTTTaGTTAGTTCTGCTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HKNHDSDLWVIKILYNEWVCVHF*LVLLGA
Trigger: AGCTCCCAGCAGAACTAACCAAAAATGAACGCATAC...CCATTCATTGTAAAGTATTTTTATCACCCAAAGATCAGAGTCATGGTTCTTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR GCA 90 bp GTTGTCAAACAGATGGATGTAGTAGCAAACTTTTGTAGTTCAGCTAAATGGATTTCAGGAGGTGCAGTATaGGTTCATTTTTGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: VVKQMDVVANFCSSAKWISGGAV*VHFWLV
Trigger: AACTAACCAAAAATGAACGCATACTGCACCTCCTGA...AATCCATTTAGCTGAACTACAAAAGTTTGCTACTACATCCATCTGTTTGACAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR GCA 90 bp CACAAGAACCATGACTCTGATCTTTGGGTGATAAAAATACTTTACAATGAATGGTCAGGAGGTGCAGTATaGGTTCATTTTTGGTTAGTT +
Preference number: 4 (lower is better)
Translates to: HKNHDSDLWVIKILYNEWSGGAV*VHFWLV
Trigger: AACTAACCAAAAATGAACGCATACTGCACCTCCTGA...CCATTCATTGTAAAGTATTTTTATCACCCAAAGATCAGAGTCATGGTTCTTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS CCA 90 bp TCACGGTCAGCTCCCCGCAGCAGCATCACGCGCACCACCTCGCTGTaGCCCATCTGGGAGGCGATCCACAGTGGCGCGGTTCCATCCTGC +
Preference number: 5 (lower is better)
Translates to: SRSAPRSSITRTTSL*PIWEAIHSGAVPSC
Trigger: GCAGGATGGAACCGCGCCACTGTGGATCGCCTCCCAGATGGGCCACAGCGAGGTGGTGCGCGTGATGCTGCTGCGGGGAGCTGACCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000234183.2
ENSMUST00000234212.2
CDS TCA 90 bp CAAGCTCCCTCACACAGTCTATGTGGCCAGCATAGGAGGCAACCATaGGAAGTGTGGTGCCGTGACTGTCTCTGCAGTCCACGTCCACAC +
Preference number: 5 (lower is better)
Translates to: QAPSHSLCGQHRRQP*EVWCRDCLCSPRPH
Trigger: GTGTGGACGTGGACTGCAGAGACAGTCACGGCACCACACTTCTCATGGTTGCCTCCTATGCTGGCCACATAGACTGTGTGAGGGAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
CDS TCA 90 bp GCTCCATGTTTCAGCAAGGTCTCCACCACTGGCATGTGCCCATACTaGCTAGCAGCCAACAGGGCAGTGCCCCCATCTTTGGTCCGACAT +
Preference number: 5 (lower is better)
Translates to: APCFSKVSTTGMCPY*LAANRAVPPSLVRH
Trigger: ATGTCGGACCAAAGATGGGGGCACTGCCCTGTTGGCTGCTAGTCAGTATGGGCACATGCCAGTGGTGGAGACCTTGCTGAAACATGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000142066.2
ENSMUST00000234183.2
ENSMUST00000234212.2
ENSMUST00000234405.2
CDS CCA 90 bp TTGGTCATGGATGTTGGCTCCATGTTTCAGCAAGGTCTCCACCACTaGCATGTGCCCATACTGACTAGCAGCCAACAGGGCAGTGCCCCC +
Preference number: 5 (lower is better)
Translates to: LVMDVGSMFQQGLHH*HVPILTSSQQGSAP
Trigger: GGGGGCACTGCCCTGTTGGCTGCTAGTCAGTATGGGCACATGCCAGTGGTGGAGACCTTGCTGAAACATGGAGCCAACATCCATGACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000142066.2
ENSMUST00000234183.2
ENSMUST00000234212.2
ENSMUST00000234405.2
CDS GCA 90 bp TGCTGGGAGCTCATTGGCCTTGTTTCTCAACGCTGGATCTGCCCCTaGTTCCAGGAGCAGGGCAACCGTTTTAACATTCCCACTGAGCAC +
Preference number: 5 (lower is better)
Translates to: CWELIGLVSQRWICP*FQEQGNRFNIPTEH
Trigger: GTGCTCAGTGGGAATGTTAAAACGGTTGCCCTGCTCCTGGAAGCAGGGGCAGATCCAGCGTTGAGAAACAAGGCCAATGAGCTCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS CCA 90 bp CCAGAAAGAGGGCCGTGGCTCCATCATAAAGTTGGTCATGGATGTTaGCTCCATGTTTCAGCAAGGTCTCCACCACTGGCATGTGCCCAT +
Preference number: 5 (lower is better)
Translates to: PERGPWLHHKVGHGC*LHVSARSPPLACAH
Trigger: ATGGGCACATGCCAGTGGTGGAGACCTTGCTGAAACATGGAGCCAACATCCATGACCAACTTTATGATGGAGCCACGGCCCTCTTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000142066.2
ENSMUST00000234183.2
ENSMUST00000234212.2
ENSMUST00000234405.2
CDS-3UTR CAA 90 bp AAGCCCACTGTAAATAAAGGGAAGTGGACCCTGAGCCGTCCTGGGTCAGTGCACCCCAGGTCCTTCTTTTaGTCTCAGGAGGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: KPTVNKGKWTLSRPGSVHPRSFF*SQEVQY
Trigger: ATACTGCACCTCCTGAGACAAAAAGAAGGACCTGGG...GTGCACTGACCCAGGACGGCTCAGGGTCCACTTCCCTTTATTTACAGTGGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp CCGTCCTGGGTCAGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCAGTTGGTCATGGATGTaGGCTCCATGTTTCAGCAAG +
Preference number: 5 (lower is better)
Translates to: PSWVSAQCANPQGRHSFFSWSWM*APCFSK
Trigger: CTTGCTGAAACATGGAGCCAACATCCATGACCAACT...GAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACCCAGGACGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS CCA 90 bp GCTCCAAATCCAAAGAGAAATCTCACAACATCATTGTGGCCTTGCTaGGCAGCGAAGAACAGGGCAGTTGTACCTGACTCTCTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: APNPKRNLTTSLWPC*AAKNRAVVPDSLWR
Trigger: CCTCCAGAGAGAGTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATTTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp CCGTCCTGGGTCAGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCAGTATGCGTTCATTTTaGGTTAGTTCTGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: PSWVSAQCANPQGRHSFFSMRSF*VSSAGS
Trigger: GCTCCCAGCAGAACTAACCAAAAATGAACGCATACT...GAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACTGACCCAGGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp CCGATCCCTTGGCTCCAGCTCCTGAGTACTGGCCTTAAAACTATGAACTACCACTCCATCCTTGGCTGGTaGACTTTTGCTCCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: PIPWLQLLSTGLKTMNYHSILGW*TFAPED
Trigger: GTCTTCAGGAGCAAAAGTCAACCAGCCAAGGATGGA...GTGGTAGTTCATAGTTTTAAGGCCAGTACTCAGGAGCTGGAGCCAAGGGATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS GCA 90 bp GATGCTCCAAATCCAAAGAGAAATCTCACAACATCATTGTGGCCTTaGTGGGCAGCGAAGAACAGGGCAGTTGTACCTGACTCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: DAPNPKRNLTTSLWP*WAAKNRAVVPDSLW
Trigger: CCAGAGAGAGTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATTTGGAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000234183.2
CDS GCA 90 bp AGCCAACAGGGCAGTGCCCCCATCTTTGGTCCGACATTCAGTGGATaGTCCAAATCCAAAGAGAAATCTCACAACATCATTGTGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SQQGSAPIFGPTFSG*SKSKEKSHNIIVAL
Trigger: CAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATTTGGAGCATCCACTGAATGTCGGACCAAAGATGGGGGCACTGCCCTGTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000142066.2
ENSMUST00000234183.2
ENSMUST00000234212.2
CDS CCA 90 bp GCTCCAAATCCAAAGAGAAATCTCACAACATCATTGTGGCCTTGCTaGGCAGCGAAGAACAGGGCAGTTGTACCTGAACTGTCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: APNPKRNLTTSLWPC*AAKNRAVVPELSLQ
Trigger: CTGCAGAGACAGTTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATTTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234212.2
CDS-3UTR CAA 90 bp CCCTCCTCAAACAGTTTGGTGAACTTGTGGTTCTTTGCTGGAATCAATTCACCCGCCCAGAATGCAGCATaGGCAAGCGGAGTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: PSSNSLVNLWFFAGINSPAQNAA*ASGVSF
Trigger: GAAGGAAACTCCGCTTGCCAATGCTGCATTCTGGGC...GGGTGAATTGATTCCAGCAAAGAACCACAAGTTCACCAAACTGTTTGAGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CAA 90 bp CCCTCCTCAAACAGTTTGGTGAACTTGTGGTTCTTTGCTGGAATCAATTCACCCGACTCTCTCTGGAGGTaGATGTCTGCTCCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: PSSNSLVNLWFFAGINSPDSLWR*MSAPCR
Trigger: TCTGCAGGGAGCAGACATCAACCTCCAGAGAGAGTC...GGGTGAATTGATTCCAGCAAAGAACCACAAGTTCACCAAACTGTTTGAGGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS GCA 90 bp GATGCTCCAAATCCAAAGAGAAATCTCACAACATCATTGTGGCCTTaGTGGGCAGCGAAGAACAGGGCAGTTGTACCTGACTTGAAGGAC +
Preference number: 5 (lower is better)
Translates to: DAPNPKRNLTTSLWP*WAAKNRAVVPDLKD
Trigger: GTCCTTCAAGTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATTTGGAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142066.2
CDS GCA 90 bp GATGCTCCAAATCCAAAGAGAAATCTCACAACATCATTGTGGCCTTaGTGGGCAGCGAAGAACAGGGCAGTTGTACCTGAACTGTCTCTG +
Preference number: 5 (lower is better)
Translates to: DAPNPKRNLTTSLWP*WAAKNRAVVPELSL
Trigger: CAGAGACAGTTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATTTGGAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234212.2
CDS CCA 90 bp TCAGTGGATGCTCCAAATCCAAAGAGAAATCTCACAACATCATTGTaGCCTTGCTGGGCAGCGAAGAACAGGGCAGTTGTACCTGACTCT +
Preference number: 5 (lower is better)
Translates to: SVDAPNPKRNLTTSL*PCWAAKNRAVVPDS
Trigger: AGAGTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATTTGGAGCATCCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000234183.2
CDS CCA 90 bp GCTCCAAATCCAAAGAGAAATCTCACAACATCATTGTGGCCTTGCTaGGCAGCGAAGAACAGGGCAGTTGTACCTGACTTGAAGGACATC +
Preference number: 5 (lower is better)
Translates to: APNPKRNLTTSLWPC*AAKNRAVVPDLKDI
Trigger: GATGTCCTTCAAGTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATTTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142066.2
CDS CCA 90 bp TCAGTGGATGCTCCAAATCCAAAGAGAAATCTCACAACATCATTGTaGCCTTGCTGGGCAGCGAAGAACAGGGCAGTTGTACCTGACTTG +
Preference number: 5 (lower is better)
Translates to: SVDAPNPKRNLTTSL*PCWAAKNRAVVPDL
Trigger: CAAGTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATTTGGAGCATCCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142066.2
CDS CCA 90 bp TCAGTGGATGCTCCAAATCCAAAGAGAAATCTCACAACATCATTGTaGCCTTGCTGGGCAGCGAAGAACAGGGCAGTTGTACCTGAACTG +
Preference number: 5 (lower is better)
Translates to: SVDAPNPKRNLTTSL*PCWAAKNRAVVPEL
Trigger: CAGTTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATTTGGAGCATCCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234212.2
CDS-3UTR CAA 90 bp CCATTGCTTATGTATACACTGGTTCACAAGAACCATGACTCTGATCTTTGGGTGATCCAAGTAGCCACCTaGGGCAGCCAGAAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: PLLMYTLVHKNHDSDLWVIQVAT*GSQKEG
Trigger: GCCCTCTTTCTGGCTGCCCAAGGTGGCTACTTGGAT...CACCCAAAGATCAGAGTCATGGTTCTTGTGAACCAGTGTATACATAAGCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp CCCTCCTCAAACAGTTTGGTGAACTTGTGGTTCTTTGCTGGAATCAATTCACCCTCCTGCCTTGGCTGGTaGACTTTTGCTCCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: PSSNSLVNLWFFAGINSPSCLGW*TFAPED
Trigger: GTCTTCAGGAGCAAAAGTCAACCAGCCAAGGCAGGA...GGGTGAATTGATTCCAGCAAAGAACCACAAGTTCACCAAACTGTTTGAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS CCA 90 bp CAGGTCCTTCTTTTTGTCTCAGGAGGTGCAGTATGCGTTCATTTTTaGTTAGTTCTGCTGGGAGCTCATTGGCCTTGTTTCTCAACGCTG +
Preference number: 5 (lower is better)
Translates to: QVLLFVSGGAVCVHF*LVLLGAHWPCFSTL
Trigger: CAGCGTTGAGAAACAAGGCCAATGAGCTCCCAGCAGAACTAACCAAAAATGAACGCATACTGCACCTCCTGAGACAAAAAGAAGGACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp TATGAAAATCGAGGCAGAGTCTGTGAGATGCCTTCTGAGGAGGAGGACTCTTTAGGCTCCATCATAAAGTaGGTCATGGATGTTGGCTCC +
Preference number: 5 (lower is better)
Translates to: YENRGRVCEMPSEEEDSLGSIIK*VMDVGS
Trigger: GGAGCCAACATCCATGACCAACTTTATGATGGAGCC...TAAAGAGTCCTCCTCCTCAGAAGGCATCTCACAGACTCTGCCTCGATTTTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR CAA 90 bp GAAGGAAGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACATCCAAGTAGCCACCTaGGGCAGCCAGAAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: EGRLISVYAVRHQQRQLDIQVAT*GSQKEG
Trigger: GCCCTCTTTCTGGCTGCCCAAGGTGGCTACTTGGAT...GTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCTTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CAA 90 bp GAAGGAAGATTGATTTCTGTATATGCAGTTAGGCACCAACAGAGGCAATTAGACCCAGGTTTCCCCTCTTaGCTGCCCAGAATGCAGCAT +
Preference number: 5 (lower is better)
Translates to: EGRLISVYAVRHQQRQLDPGFPS*LPRMQH
Trigger: ATGCTGCATTCTGGGCAGCAAAGAGGGGAAACCTGG...GTCTAATTGCCTCTGTTGGTGCCTAACTGCATATACAGAAATCAATCTTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CAA 90 bp AGTGCACAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTGGCTCCATCATAAAGTaGGTCATGGATGTTGGCTCC +
Preference number: 5 (lower is better)
Translates to: SAQCANPQGRHSFFISNIGSIIK*VMDVGS
Trigger: GGAGCCAACATCCATGACCAACTTTATGATGGAGCC...AATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTGTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp CCATTGCTTATGTATACACTGGTTCACAAGAACCATGACTCTGATCTTTGGGTGTCCTGCCTTGGCTGGTaGACTTTTGCTCCTGAAGAC +
Preference number: 5 (lower is better)
Translates to: PLLMYTLVHKNHDSDLWVSCLGW*TFAPED
Trigger: GTCTTCAGGAGCAAAAGTCAACCAGCCAAGGCAGGA...CACCCAAAGATCAGAGTCATGGTTCTTGTGAACCAGTGTATACATAAGCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp CAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTGTTAAGGGGAGCTCATTGGCCTaGTTTCTCAACGCTGGATCT +
Preference number: 5 (lower is better)
Translates to: QCANPQGRHSFFISNIVKGSSLA*FLNAGS
Trigger: AGATCCAGCGTTGAGAAACAAGGCCAATGAGCTCCC...CTTAACAATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp CCATTGCTTATGTATACACTGGTTCACAAGAACCATGACTCTGATCTTTGGGTGGGGAGCTCATTGGCCTaGTTTCTCAACGCTGGATCT +
Preference number: 5 (lower is better)
Translates to: PLLMYTLVHKNHDSDLWVGSSLA*FLNAGS
Trigger: AGATCCAGCGTTGAGAAACAAGGCCAATGAGCTCCC...CACCCAAAGATCAGAGTCATGGTTCTTGTGAACCAGTGTATACATAAGCAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp TGTTCAGTTTTTGGTAGGTTCTTACCCAACTTCCCTGCCACGGATAACATCATAGGCTCCATCATAAAGTaGGTCATGGATGTTGGCTCC +
Preference number: 5 (lower is better)
Translates to: CSVFGRFLPNFPATDNIIGSIIK*VMDVGS
Trigger: GGAGCCAACATCCATGACCAACTTTATGATGGAGCC...TATGATGTTATCCGTGGCAGGGAAGTTGGGTAAGAACCTACCAAAAACTGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118525.9
CDS-3UTR CAA 90 bp CAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTGTTAAGCCCAGGTCCTTCTTTTaGTCTCAGGAGGTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: QCANPQGRHSFFISNIVKPRSFF*SQEVQY
Trigger: ATACTGCACCTCCTGAGACAAAAAGAAGGACCTGGG...CTTAACAATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp ACTGAAATCATGTCCAACATGGAGCTGAACTTAGTTATCATAGTTGTAGATAGGGACTCTCTCTGGAGGTaGATGTCTGCTCCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: TEIMSNMELNLVIIVVDRDSLWR*MSAPCR
Trigger: TCTGCAGGGAGCAGACATCAACCTCCAGAGAGAGTC...CCTATCTACAACTATGATAACTAAGTTCAGCTCCATGTTGGACATGATTTCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp CATGTGATCCTACTAATAACACATTTTTCTGACCAAGTCGCTAAGCATACATTAATCCAAGTAGCCACCTaGGGCAGCCAGAAAGAGGGC +
Preference number: 5 (lower is better)
Translates to: HVILLITHFSDQVAKHTLIQVAT*GSQKEG
Trigger: GCCCTCTTTCTGGCTGCCCAAGGTGGCTACTTGGAT...TAATGTATGCTTAGCGACTTGGTCAGAAAAATGTGTTATTAGTAGGATCACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS-3UTR CAA 90 bp CCATTGCTTATGTATACACTGGTTCACAAGAACCATGACTCTGATCTTTGGGTGACATCGTTATACCCTTaGTTGGCTGCTTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: PLLMYTLVHKNHDSDLWVTSLYP*LAAFSN
Trigger: ATTGCTGAAAGCAGCCAACAAAGGGTATAACGATGT...CACCCAAAGATCAGAGTCATGGTTCTTGTGAACCAGTGTATACATAAGCAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS-3UTR CAA 90 bp CAGTGTGCAAACCCACAGGGCAGACATTCTTTCTTCATTTCCAACATTGTTAAGACATCGTTATACCCTTaGTTGGCTGCTTTCAGCAAT +
Preference number: 5 (lower is better)
Translates to: QCANPQGRHSFFISNIVKTSLYP*LAAFSN
Trigger: ATTGCTGAAAGCAGCCAACAAAGGGTATAACGATGT...CTTAACAATGTTGGAAATGAAGAAAGAATGTCTGCCCTGTGGGTTTGCACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS CCA 72 bp GCTCCCCGCAGCAGCATCACGCGCACCACCTCGCTGTaGCCCATCTGGGAGGCGATCCACAGTGGCGCGGTT +
Preference number: 6 (lower is better)
Translates to: APRSSITRTTSL*PIWEAIHSGAV
Trigger: AACCGCGCCACTGTGGATCGCCTCCCAGATGGGCCACAGCGAGGTGGTGCGCGTGATGCTGCTGCGGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000234183.2
ENSMUST00000234212.2
CDS CCA 72 bp AGCAGCATCACGCGCACCACCTCGCTGTGGCCCATCTaGGAGGCGATCCACAGTGGCGCGGTTCCATCCTGC +
Preference number: 6 (lower is better)
Translates to: SSITRTTSLWPI*EAIHSGAVPSC
Trigger: GCAGGATGGAACCGCGCCACTGTGGATCGCCTCCCAGATGGGCCACAGCGAGGTGGTGCGCGTGATGCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000234183.2
ENSMUST00000234212.2
CDS CCA 72 bp CACCTCGCTGTGGCCCATCTGGGAGGCGATCCACAGTaGCGCGGTTCCATCCTGCCTTGGCTGGTTGACTTT +
Preference number: 6 (lower is better)
Translates to: HLAVAHLGGDPQ*RGSILPWLVDF
Trigger: AAAGTCAACCAGCCAAGGCAGGATGGAACCGCGCCACTGTGGATCGCCTCCCAGATGGGCCACAGCGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000234183.2
ENSMUST00000234212.2
CDS CCA 72 bp CACCTCGCTGTGGCCCATCTGGGAGGCGATCCACAGTaGCGCGGTTCCATCCTTGGCTGGTTGACTTTTGCT +
Preference number: 6 (lower is better)
Translates to: HLAVAHLGGDPQ*RGSILGWLTFA
Trigger: AGCAAAAGTCAACCAGCCAAGGATGGAACCGCGCCACTGTGGATCGCCTCCCAGATGGGCCACAGCGAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS CCA 72 bp GGAGGCGATCCACAGTGGCGCGGTTCCATCCTTGGCTaGTTGACTTTTGCTCCTGAAGACAGCAGTAGTCGG +
Preference number: 6 (lower is better)
Translates to: GGDPQWRGSILG*LTFAPEDSSSR
Trigger: CCGACTACTGCTGTCTTCAGGAGCAAAAGTCAACCAGCCAAGGATGGAACCGCGCCACTGTGGATCGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS TCA 72 bp TTCAGCAAGGTCTCCACCACTGGCATGTGCCCATACTaGCTAGCAGCCAACAGGGCAGTGCCCCCATCTTTG +
Preference number: 6 (lower is better)
Translates to: FSKVSTTGMCPY*LAANRAVPPSL
Trigger: CAAAGATGGGGGCACTGCCCTGTTGGCTGCTAGTCAGTATGGGCACATGCCAGTGGTGGAGACCTTGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000142066.2
ENSMUST00000234183.2
ENSMUST00000234212.2
ENSMUST00000234405.2
CDS CAA 72 bp GGCGATCCACAGTGGCGCGGTTCCATCCTTGGCTGGTaGACTTTTGCTCCTGAAGACAGCAGTAGTCGGATG +
Preference number: 6 (lower is better)
Translates to: GDPQWRGSILGW*TFAPEDSSSRM
Trigger: CATCCGACTACTGCTGTCTTCAGGAGCAAAAGTCAACCAGCCAAGGATGGAACCGCGCCACTGTGGATCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000234405.2
CDS TCA 72 bp TCACACAGTCTATGTGGCCAGCATAGGAGGCAACCATaGGAAGTGTGGTGCCGTGACTGTCTCTGCAGTCCA +
Preference number: 6 (lower is better)
Translates to: SHSLCGQHRRQP*EVWCRDCLCSP
Trigger: TGGACTGCAGAGACAGTCACGGCACCACACTTCTCATGGTTGCCTCCTATGCTGGCCACATAGACTGTGTGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
CDS TCA 72 bp AGAACAGGGCAGTTGTACCTGACTCTCTCTGGAGGTTaGTGTCTGCTCCCTGCAGAACAAGCTCCCTCACAC +
Preference number: 6 (lower is better)
Translates to: RTGQLYLTLSGG*CLLPAEQAPSH
Trigger: GTGTGAGGGAGCTTGTTCTGCAGGGAGCAGACATCAACCTCCAGAGAGAGTCAGGTACAACTGCCCTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000234183.2
CDS GCA 72 bp CTCATTGGCCTTGTTTCTCAACGCTGGATCTGCCCCTaGTTCCAGGAGCAGGGCAACCGTTTTAACATTCCC +
Preference number: 6 (lower is better)
Translates to: LIGLVSQRWICP*FQEQGNRFNIP
Trigger: GGGAATGTTAAAACGGTTGCCCTGCTCCTGGAAGCAGGGGCAGATCCAGCGTTGAGAAACAAGGCCAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS CAA 72 bp GCCAGGTTTCCCCTCTTTGCTGCCCAGAATGCAGCATaGGCAAGCGGAGTTTCCTTCTTGAAGGACATCCTG +
Preference number: 6 (lower is better)
Translates to: ARFPLFAAQNAA*ASGVSFLKDIL
Trigger: CAGGATGTCCTTCAAGAAGGAAACTCCGCTTGCCAATGCTGCATTCTGGGCAGCAAAGAGGGGAAACCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
CDS GCA 72 bp CAGCGAAGAACAGGGCAGTTGTACCTGAACTGTCTCTaGAGTCCACGTCCACACGGCCACTGTTTAATAGCA +
Preference number: 6 (lower is better)
Translates to: QRRTGQLYLNCL*SPRPHGHCLIA
Trigger: TGCTATTAAACAGTGGCCGTGTGGACGTGGACTGCAGAGACAGTTCAGGTACAACTGCCCTGTTCTTCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234212.2
CDS CCA 72 bp CCAAAGAGAAATCTCACAACATCATTGTGGCCTTGCTaGGCAGCGAAGAACAGGGCAGTTGTACCTGACTCT +
Preference number: 6 (lower is better)
Translates to: PKRNLTTSLWPC*AAKNRAVVPDS
Trigger: AGAGTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000234183.2
CDS CCA 72 bp CCAAAGAGAAATCTCACAACATCATTGTGGCCTTGCTaGGCAGCGAAGAACAGGGCAGTTGTACCTGACTTG +
Preference number: 6 (lower is better)
Translates to: PKRNLTTSLWPC*AAKNRAVVPDL
Trigger: CAAGTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142066.2
CDS CCA 72 bp CCAAAGAGAAATCTCACAACATCATTGTGGCCTTGCTaGGCAGCGAAGAACAGGGCAGTTGTACCTGAACTG +
Preference number: 6 (lower is better)
Translates to: PKRNLTTSLWPC*AAKNRAVVPEL
Trigger: CAGTTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234212.2
CDS GCA 72 bp AATCCAAAGAGAAATCTCACAACATCATTGTGGCCTTaGTGGGCAGCGAAGAACAGGGCAGTTGTACCTGAC +
Preference number: 6 (lower is better)
Translates to: NPKRNLTTSLWP*WAAKNRAVVPD
Trigger: GTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000142066.2
ENSMUST00000234183.2
CDS CCA 72 bp GCTCCAAATCCAAAGAGAAATCTCACAACATCATTGTaGCCTTGCTGGGCAGCGAAGAACAGGGCAGTTGTA +
Preference number: 6 (lower is better)
Translates to: APNPKRNLTTSL*PCWAAKNRAVV
Trigger: TACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATTTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000142066.2
ENSMUST00000234183.2
ENSMUST00000234212.2
CDS CCA 72 bp ACAGGGCAGTGCCCCCATCTTTGGTCCGACATTCAGTaGATGCTCCAAATCCAAAGAGAAATCTCACAACAT +
Preference number: 6 (lower is better)
Translates to: TGQCPHLWSDIQ*MLQIQREISQH
Trigger: ATGTTGTGAGATTTCTCTTTGGATTTGGAGCATCCACTGAATGTCGGACCAAAGATGGGGGCACTGCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000142066.2
ENSMUST00000234183.2
ENSMUST00000234212.2
CDS CAA 90 bp CCAGGTCCTTCTTTTTGTCTCAGGAGGTGCAGTATGCGTTCATTTTaGGTTAGTTCTGCTGGGAGCTCATTGGCCTTGTTTCTCAACGCT +
Preference number: 6 (lower is better)
Translates to: PGPSFCLRRCSMRSF*VSSAGSSLALFLNA
Trigger: AGCGTTGAGAAACAAGGCCAATGAGCTCCCAGCAGAACTAACCAAAAATGAACGCATACTGCACCTCCTGAGACAAAAAGAAGGACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS CAA 90 bp GCTGGGAGCTCATTGGCCTTCAAAATACCAAGAGTAGGTGAGAATTaGAGCAGCTCCTCTATGACATCGTTATACCCTTTGTTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: AGSSLAFKIPRVGEN*SSSSMTSLYPLLAA
Trigger: AGCAGCCAACAAAGGGTATAACGATGTCATAGAGGAGCTGCTCAAATTCTCACCTACTCTTGGTATTTTGAAGGCCAATGAGCTCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122408.8
CDS GCA 72 bp AATCCAAAGAGAAATCTCACAACATCATTGTGGCCTTaGTGGGCAGCGAAGAACAGGGCAGTTGTACCTGAA +
Preference number: 6 (lower is better)
Translates to: NPKRNLTTSLWP*WAAKNRAVVPE
Trigger: TTCAGGTACAACTGCCCTGTTCTTCGCTGCCCAGCAAGGCCACAATGATGTTGTGAGATTTCTCTTTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234212.2
CDS CCA 72 bp CTTTTTGTCTCAGGAGGTGCAGTATGCGTTCATTTTTaGTTAGTTCTGCTGGGAGCTCATTGGCCTTGTTTC +
Preference number: 6 (lower is better)
Translates to: LFVSGGAVCVHF*LVLLGAHWPCF
Trigger: GAAACAAGGCCAATGAGCTCCCAGCAGAACTAACCAAAAATGAACGCATACTGCACCTCCTGAGACAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS CCA 72 bp CTTTTTGTCTCAGGAGGTGCAGTATGCGTTCATTTTTaGTTAGTTCTGCTGGGAGCTCATTGGCCTTCAAAA +
Preference number: 6 (lower is better)
Translates to: LFVSGGAVCVHF*LVLLGAHWPSK
Trigger: TTTTGAAGGCCAATGAGCTCCCAGCAGAACTAACCAAAAATGAACGCATACTGCACCTCCTGAGACAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000122408.8
CDS CAA 72 bp TCTTTTTGTCTCAGGAGGTGCAGTATGCGTTCATTTTaGGTTAGTTCTGCTGGGAGCTCATTGGCCTTCAAA +
Preference number: 6 (lower is better)
Translates to: SFCLRRCSMRSF*VSSAGSSLAFK
Trigger: TTTGAAGGCCAATGAGCTCCCAGCAGAACTAACCAAAAATGAACGCATACTGCACCTCCTGAGACAAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000122408.8
CDS CAA 72 bp GATGGATCCAAGTTCATTCTTCCCAGGTCCTTCTTTTaGTCTCAGGAGGTGCAGTATGCGTTCATTTTTGGT +
Preference number: 6 (lower is better)
Translates to: DGSKFILPRSFF*SQEVQYAFIFG
Trigger: ACCAAAAATGAACGCATACTGCACCTCCTGAGACAAAAAGAAGGACCTGGGAAGAATGAACTTGGATCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000118525.9
ENSMUST00000122408.8
ENSMUST00000234183.2
CDS CAA 72 bp TCTTTTTGTCTCAGGAGGTGCAGTATGCGTTCATTTTaGGTTAGTTCTGCTGGGAGCTCATTGGCCTTGTTT +
Preference number: 6 (lower is better)
Translates to: SFCLRRCSMRSF*VSSAGSSLALF
Trigger: AAACAAGGCCAATGAGCTCCCAGCAGAACTAACCAAAAATGAACGCATACTGCACCTCCTGAGACAAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000118525.9
ENSMUST00000234183.2
CDS CAA 72 bp TCATTGGCCTTCAAAATACCAAGAGTAGGTGAGAATTaGAGCAGCTCCTCTATGACATCGTTATACCCTTTG +
Preference number: 6 (lower is better)
Translates to: SLAFKIPRVGEN*SSSSMTSLYPL
Trigger: CAAAGGGTATAACGATGTCATAGAGGAGCTGCTCAAATTCTCACCTACTCTTGGTATTTTGAAGGCCAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000122408.8