Pregenerated sensors for ANKRD22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024774Ensembl transcript IDs: ENSMUST00000025686.9
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAGACACTGGATTGTACATTCTTTAAAAATCAGTTTTGACAACTaGGATTCCAACGTGAGCAATGGGTCCTTTGGAGAGATGAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: RRHWIVHSLKISFDN*DSNVSNGSFGEMKA Trigger: GGCCTTCATCTCTCCAAAGGACCCATTGCTCACGTTGGAATCTCAGTTGTCAAAACTGATTTTTAAAGAATGTACAATCCAGTGTCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAGGGACTTCAGGACCCCATGTGTACCCTTAGGGTCTATATATAGCTTAGTAATGTGCCAGTTTCTATaGTTTTGGCAAACTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: FRDFRTPCVPLGSIYSLVMCQFL*FWQTHH Trigger: GTGGTGAGTTTGCCAAAACCATAGAAACTGGCACAT...TACTAAGCTATATATAGACCCTAAGGGTACACATGGGGTCCTGAAGTCCCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR GCA 90 bp | GTTTCTTCATTTGACACGAAAGCTGATACTTACACTTTTTCCAGTTGGTTAAACTTGTCACAAAGTGGATaGATCCAGCTTGAGTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: VSSFDTKADTYTFSSWLNLSQSG*IQLECP Trigger: TGGGCACTCAAGCTGGATGCATCCACTTTGTGACAA...GTTTAACCAACTGGAAAAAGTGTAAGTATCAGCTTTCGTGTCAAATGAAGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR GCA 90 bp | CCATGTGTACCCTTAGGGTCTATATATAGCTTAGTATACATGTCCAGATTTGATCATACATGCAAGCCATaGTGTACAAGTGCACACACA | + |
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Preference number: 2 (lower is better) Translates to: PCVPLGSIYSLVYMSRFDHTCKP*CTSAHT Trigger: TGTGTGTGCACTTGTACAGCATGGCTTGCATGTATG...ATCAAATCTGGACATGTATACTAAGCTATATATAGACCCTAAGGGTACACATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR GCA 90 bp | CAACTGAAAACTGAAATCATTGTGGGTAGGTGGAGTCTAACTAAACAATCAAGTATAAAAGCTCTCCTGTaGCTGTTGGAGTTCCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: QLKTEIIVGRWSLTKQSSIKALL*LLEFQL Trigger: CAACTGGAACTCCAACAGGCACAGGAGAGCTTTTAT...ACTTGATTGTTTAGTTAGACTCCACCTACCCACAATGATTTCAGTTTTCAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR CCA 90 bp | TACCCACAAGATGTATCTAGACTGTTATCATTGCATCATTCAACCTTTCCAACATTCCAACGTGAGCAATaGGTCCTTTGGAGAGATGAA | + |
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Preference number: 2 (lower is better) Translates to: YPQDVSRLLSLHHSTFPTFQREQ*VLWRDE Trigger: TTCATCTCTCCAAAGGACCCATTGCTCACGTTGGAA...TGTTGGAAAGGTTGAATGATGCAATGATAACAGTCTAGATACATCTTGTGGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR TCA 90 bp | TGTGTATCAGTACTAAGATTTTCATCTGCTATTAGACCAGCTGCTCCAAATGAGAGTGCACACACACTTTaGTTTTTGGGCTTAGTATGT | + |
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Preference number: 2 (lower is better) Translates to: CVSVLRFSSAIRPAAPNESAHTL*FLGLVC Trigger: ACATACTAAGCCCAAAAATCAAAGTGTGTGTGCACT...CTCATTTGGAGCAGCTGGTCTAATAGCAGATGAAAATCTTAGTACTGATACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR TCA 90 bp | TACCCACAAGATGTATCTAGACTGTTATCATTGCATCATTCAACCTTTCCAACATGGCAAACTCACCACTaGCAACCAACATATGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: YPQDVSRLLSLHHSTFPTWQTHH*QPTYVF Trigger: AAAAACATATGTTGGTTGTCAGTGGTGAGTTTGCCA...TGTTGGAAAGGTTGAATGATGCAATGATAACAGTCTAGATACATCTTGTGGGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR TCA 90 bp | ATTGTTGACTTGGATAAAATGAAGTGGACCTTGCCATCACATTGCCATAAAGACTGTTGGAGTTCCAGTTaGGAATATACAGTTGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: IVDLDKMKWTLPSHCHKDCWSSS*EYTVVC Trigger: ACAAACAACTGTATATTCTCAACTGGAACTCCAACA...GTCTTTATGGCAATGTGATGGCAAGGTCCACTTCATTTTATCCAAGTCAACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR GCA 90 bp | CCATGTGTACCCTTAGGGTCTATATATAGCTTAGTATACATGTCCAGATTTGATGCCATGCTGTACAAGTaGACACACACTTTGATTTTT | + |
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Preference number: 2 (lower is better) Translates to: PCVPLGSIYSLVYMSRFDAMLYK*THTLIF Trigger: AAAAATCAAAGTGTGTGTGCACTTGTACAGCATGGC...ATCAAATCTGGACATGTATACTAAGCTATATATAGACCCTAAGGGTACACATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR GCA 72 bp | TATCAGTTAGTCAGAAGGACAGAGGAGATACCCAGATaGCAGAAGACCTCCTGGTCCAAATTAAAGCTTCAT | + |
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Preference number: 3 (lower is better) Translates to: YQLVRRTEEIPR*QKTSWSKLKLH Trigger: ATGAAGCTTTAATTTGGACCAGGAGGTCTTCTGGCATCTGGGTATCTCCTCTGTCCTTCTGACTAACTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR CCA 72 bp | AGGACAGAGGAGATACCCAGATGCCAGAAGACCTCCTaGTCCAAATTAAAGCTTCATTTGTTTCTTCATTTG | + |
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Preference number: 3 (lower is better) Translates to: RTEEIPRCQKTS*SKLKLHLFLHL Trigger: CAAATGAAGAAACAAATGAAGCTTTAATTTGGACCAGGAGGTCTTCTGGCATCTGGGTATCTCCTCTGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR CAA 90 bp | TACCCACAAGATGTATCTAGACTGTTATCATTGCATCATTCAACCTTTCCAACAGGAGAGATGAAGGCCTaGGTGACCTCCACTGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: YPQDVSRLLSLHHSTFPTGEMKA*VTSTVK Trigger: TTTTACAGTGGAGGTCACCAAGGCCTTCATCTCTCC...TGTTGGAAAGGTTGAATGATGCAATGATAACAGTCTAGATACATCTTGTGGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR CAA 90 bp | TACCCACAAGATGTATCTAGACTGTTATCATTGCATCATTCAACCTTTCCAACAGCTCTCCTGTGCCTGTaGGAGTTCCAGTTGAGAATA | + |
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Preference number: 3 (lower is better) Translates to: YPQDVSRLLSLHHSTFPTALLCL*EFQLRI Trigger: TATTCTCAACTGGAACTCCAACAGGCACAGGAGAGC...TGTTGGAAAGGTTGAATGATGCAATGATAACAGTCTAGATACATCTTGTGGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR CAA 90 bp | CCATGTGTACCCTTAGGGTCTATATATAGCTTAGTATACATGTCCAGATTTGATGCAATAATCCATGATTaGGACAACATCCAGTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: PCVPLGSIYSLVYMSRFDAIIHD*DNIQSF Trigger: GAAGGACTGGATGTTGTCCAAATCATGGATTATTGC...ATCAAATCTGGACATGTATACTAAGCTATATATAGACCCTAAGGGTACACATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR CAA 90 bp | ATTGTTGACTTGGATAAAATGAAGTGGACCTTGCCATCACATTGCCATAAAGACCTGTTGGAGTTCCAGTaGAGAATATACAGTTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: IVDLDKMKWTLPSHCHKDLLEFQ*RIYSCL Trigger: CAAACAACTGTATATTCTCAACTGGAACTCCAACAG...GTCTTTATGGCAATGTGATGGCAAGGTCCACTTCATTTTATCCAAGTCAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR TCA 72 bp | TGGATTGTACATTCTTTAAAAATCAGTTTTGACAACTaGGATTCCAACGTGAGCAATGGGTCCTTTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: WIVHSLKISFDN*DSNVSNGSFGE Trigger: CTCTCCAAAGGACCCATTGCTCACGTTGGAATCTCAGTTGTCAAAACTGATTTTTAAAGAATGTACAATCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR CCA 72 bp | TTTGACACGAAAGCTGATACTTACACTTTTTCCAGTTaGTTAAACTCAGTTGGTGAACACAGGTTTTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: FDTKADTYTFSS*LNSVGEHRFSV Trigger: CACAGAAAACCTGTGTTCACCAACTGAGTTTAACCAACTGGAAAAAGTGTAAGTATCAGCTTTCGTGTCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR CAA 90 bp | CAACTGAAAACTGAAATCATTGTGGGTAGGTGGAGTCTAACTAAACAATCAAGTTCAGGTAACTCTGACTaGTTTTTAGAAGACACTGGA | + |
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Preference number: 3 (lower is better) Translates to: QLKTEIIVGRWSLTKQSSSGNSD*FLEDTG Trigger: TCCAGTGTCTTCTAAAAACAAGTCAGAGTTACCTGA...ACTTGATTGTTTAGTTAGACTCCACCTACCCACAATGATTTCAGTTTTCAGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR-3UTR CAA 90 bp | TACCCACAAGATGTATCTAGACTGTTATCATTGCATCATTCAACCTTTCCAACAAAGTGCACACACACTTaGATTTTTGGGCTTAGTATG | + |
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Preference number: 3 (lower is better) Translates to: YPQDVSRLLSLHHSTFPTKCTHT*IFGLSM Trigger: CATACTAAGCCCAAAAATCAAAGTGTGTGTGCACTT...TGTTGGAAAGGTTGAATGATGCAATGATAACAGTCTAGATACATCTTGTGGGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR CCA 90 bp | CAACTGAAAACTGAAATCATTGTGGGTAGGTGGAGTCTAACTAAACAATCAAGTGAGACAATTCTCAGGTaGCCCCGCCTGCAGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: QLKTEIIVGRWSLTKQSSETILR*PRLQAQ Trigger: CTGTGCCTGCAGGCGGGGCCACCTGAGAATTGTCTC...ACTTGATTGTTTAGTTAGACTCCACCTACCCACAATGATTTCAGTTTTCAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR CAA 72 bp | AAGTCCAGTGCTTGTCACAAAGTGGATGCATCCAGCTaGAGTGCCCATAGGGCAATAATCCATGATTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: KSSACHKVDASS*SAHRAIIHDLD Trigger: GTCCAAATCATGGATTATTGCCCTATGGGCACTCAAGCTGGATGCATCCACTTTGTGACAAGCACTGGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR GCA 90 bp | GTTTCTTCATTTGACACGAAAGCTGATACTTACACTTTTTCCAGTTGGTTAAACGTCGTTCTGGTAGGCTaGCTGGCAGATGGGCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: VSSFDTKADTYTFSSWLNVVLVG*LADGLR Trigger: TCTGAGCCCATCTGCCAGGCAGCCTACCAGAACGAC...GTTTAACCAACTGGAAAAAGTGTAAGTATCAGCTTTCGTGTCAAATGAAGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR TCA 90 bp | AGGCTATTTGGTCATCAACTGAAAACTGAAATCATTGTGGGTAGGTGGAGTCTACCAGAAGCAGAGGGATaGGAGTCTGGTTTTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: RLFGHQLKTEIIVGRWSLPEAEG*ESGFSS Trigger: AGATGAAAAACCAGACTCTCATCCCTCTGCTTCTGG...TAGACTCCACCTACCCACAATGATTTCAGTTTTCAGTTGATGACCAAATAGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR GCA 90 bp | CAACTGAAAACTGAAATCATTGTGGGTAGGTGGAGTCTAACTAAACAATCAAGTATGGTTGCTTTCTTTTaGCCACCGCCACACTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: QLKTEIIVGRWSLTKQSSMVAFF*PPPHLP Trigger: GGGCAAGTGTGGCGGTGGGCAAAAGAAAGCAACCAT...ACTTGATTGTTTAGTTAGACTCCACCTACCCACAATGATTTCAGTTTTCAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR GCA 90 bp | TTTAGGGACTTCAGGACCCCATGTGTACCCTTAGGGTCTATATATAGCTTAGTAAGTGAACTCTCACCATaGTTGTTCTTTATCATGGGG | + |
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Preference number: 4 (lower is better) Translates to: FRDFRTPCVPLGSIYSLVSELSP*LFFIMG Trigger: CCCCATGATAAAGAACAAGCATGGTGAGAGTTCACT...TACTAAGCTATATATAGACCCTAAGGGTACACATGGGGTCCTGAAGTCCCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR CCA 90 bp | TACCCACAAGATGTATCTAGACTGTTATCATTGCATCATTCAACCTTTCCAACAAGGCTGCCTGGCAGATaGGCTCAGAATATAGGATTC | + |
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Preference number: 4 (lower is better) Translates to: YPQDVSRLLSLHHSTFPTRLPGR*AQNIGF Trigger: GAATCCTATATTCTGAGCCCATCTGCCAGGCAGCCT...TGTTGGAAAGGTTGAATGATGCAATGATAACAGTCTAGATACATCTTGTGGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR TCA 90 bp | CAACTGAAAACTGAAATCATTGTGGGTAGGTGGAGTCTAACTAAACAATCAAGTCTGTGCGATATCCAGTaGACTCTCACCATGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QLKTEIIVGRWSLTKQSSLCDIQ*TLTMLV Trigger: AACAAGCATGGTGAGAGTTCACTGGATATCGCACAG...ACTTGATTGTTTAGTTAGACTCCACCTACCCACAATGATTTCAGTTTTCAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR GCA 90 bp | TACCCACAAGATGTATCTAGACTGTTATCATTGCATCATTCAACCTTTCCAACACATCCACATAATGGTTaGTTTCTTTTGCCCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: YPQDVSRLLSLHHSTFPTHPHNG*FLLPTA Trigger: GGCGGTGGGCAAAAGAAAGCAACCATTATGTGGATG...TGTTGGAAAGGTTGAATGATGCAATGATAACAGTCTAGATACATCTTGTGGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR CCA 90 bp | TACCCACAAGATGTATCTAGACTGTTATCATTGCATCATTCAACCTTTCCAACAAGAGGGATGAGAGTCTaGTTTTTCATCTGGCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: YPQDVSRLLSLHHSTFPTRGMRV*FFIWQA Trigger: TGCTTGCCAGATGAAAAACCAGACTCTCATCCCTCT...TGTTGGAAAGGTTGAATGATGCAATGATAACAGTCTAGATACATCTTGTGGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR GCA 90 bp | CAAATAAAAGCTCTCCTGTGCCTGTTGGAGTTCCAGTTGAGAATATACAGTTGTACAAGAGTCTCATTCTaGTTTGTCTTTGATACCATG | + |
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Preference number: 4 (lower is better) Translates to: QIKALLCLLEFQLRIYSCTRVSF*FVFDTM Trigger: CATGGTATCAAAGACAAAGCAGAATGAGACTCTTGT...ACAACTGTATATTCTCAACTGGAACTCCAACAGGCACAGGAGAGCTTTTATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR CAA 72 bp | CTTTGGATTGTTGACTTGGATAAAATGAAGTGGACCTaGCCATCACATTGCCATAAAGACAAGACACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LWIVDLDKMKWT*PSHCHKDKTLL Trigger: AAGAAGTGTCTTGTCTTTATGGCAATGTGATGGCAAGGTCCACTTCATTTTATCCAAGTCAACAATCCAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR CAA 72 bp | GCAGGGATCAAAATTGTAAATCTTTGGATTGTTGACTaGGATAAAATGAAGTGGACCTTGCCATCACATTGC | + |
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Preference number: 4 (lower is better) Translates to: AGIKIVNLWIVD*DKMKWTLPSHC Trigger: GCAATGTGATGGCAAGGTCCACTTCATTTTATCCAAGTCAACAATCCAAAGATTTACAATTTTGATCCCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR CAA 72 bp | CAGTTGGTGAACACAGGTTTTCTGTGCTTTCTATCTTaGTCATGGTGCAATGTAGTTTTTACTTACCCACAA | + |
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Preference number: 4 (lower is better) Translates to: QLVNTGFLCFLS*SWCNVVFTYPQ Trigger: TTGTGGGTAAGTAAAAACTACATTGCACCATGACAAAGATAGAAAGCACAGAAAACCTGTGTTCACCAACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| 3UTR CAA 72 bp | CCTGTGCCTGTTGGAGTTCCAGTTGAGAATATACAGTaGTTTGTTAAACATACATTAGACTGTGAAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PVPVGVPVENIQ*FVKHTLDCEVL Trigger: AAGAACTTCACAGTCTAATGTATGTTTAACAAACAACTGTATATTCTCAACTGGAACTCCAACAGGCACAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR TCA 90 bp | CCATGTGTACCCTTAGGGTCTATATATAGCTTAGTATACATGTCCAGATTTGATATTCTGCTTTGTCTTTaGTACCATGAGGAAATATCC | + |
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Preference number: 4 (lower is better) Translates to: PCVPLGSIYSLVYMSRFDILLCL*YHEEIS Trigger: GGATATTTCCTCATGGTATCAAAGACAAAGCAGAAT...ATCAAATCTGGACATGTATACTAAGCTATATATAGACCCTAAGGGTACACATGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR CCA 90 bp | CCATGTGTACCCTTAGGGTCTATATATAGCTTAGTATACATGTCCAGATTTGATAGCATTAGTGCAATCTaGGAAAATTTTAGTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PCVPLGSIYSLVYMSRFDSISAI*ENFSLC Trigger: ACAGAGACTAAAATTTTCCCAGATTGCACTAATGCT...ATCAAATCTGGACATGTATACTAAGCTATATATAGACCCTAAGGGTACACATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS GCA 90 bp | GCCATTGAAGCTATCTTGAACATCCACATAATGGTTGCTTTCTTTTaGCCACCGCCACACTTGCCCCAAGTCGTTCTGGTAGGCTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: AIEAILNIHIMVAFF*PPPHLPQVVLVGCL Trigger: CAGGCAGCCTACCAGAACGACTTGGGGCAAGTGTGGCGGTGGGCAAAAGAAAGCAACCATTATGTGGATGTTCAAGATAGCTTCAATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS TCA 90 bp | TGTTCTTTATCATGGGGTCTGCATGGGCTTCCAGAAGCAGAGGGATaGGAGTCTGGTTTTTCATCTGGCAAGCATAGTGCAGGGCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: CSLSWGLHGLPEAEG*ESGFSSGKHSAGQC Trigger: ACACTGCCCTGCACTATGCTTGCCAGATGAAAAACCAGACTCTCATCCCTCTGCTTCTGGAAGCCCATGCAGACCCCATGATAAAGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR CAA 90 bp | TTTAGGGACTTCAGGACCCCATGTGTACCCTTAGGGTCTATATATAGCTTAGTATGCCCACCGCCACACTaGCCCCAAGTCGTTCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: FRDFRTPCVPLGSIYSLVCPPPH*PQVVLV Trigger: TACCAGAACGACTTGGGGCAAGTGTGGCGGTGGGCA...TACTAAGCTATATATAGACCCTAAGGGTACACATGGGGTCCTGAAGTCCCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS CCA 90 bp | TCCAGTGAACTCTCACCATGCTTGTTCTTTATCATGGGGTCTGCATaGGCTTCCAGAAGCAGAGGGATGAGAGTCTGGTTTTTCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: SSELSPCLFFIMGSA*ASRSRGMRVWFFIW Trigger: CCAGATGAAAAACCAGACTCTCATCCCTCTGCTTCTGGAAGCCCATGCAGACCCCATGATAAAGAACAAGCATGGTGAGAGTTCACTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR CAA 90 bp | CCATGTGTACCCTTAGGGTCTATATATAGCTTAGTATACATGTCCAGATTTGATAATGGTTGCTTTCTTTaGCCCACCGCCACACTTGCC | + |
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Preference number: 5 (lower is better) Translates to: PCVPLGSIYSLVYMSRFDNGCFL*PTATLA Trigger: GGCAAGTGTGGCGGTGGGCAAAAGAAAGCAACCATT...ATCAAATCTGGACATGTATACTAAGCTATATATAGACCCTAAGGGTACACATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS GCA 90 bp | ACTTCTACGCCAGCATTAAGGAGCATCCGGACAAGAGTCTCATTCTaGTTTGTCTTTGATACCATGAGGAAATATCCAATTAGCAAGACA | + |
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Preference number: 5 (lower is better) Translates to: TSTPALRSIRTRVSF*FVFDTMRKYPISKT Trigger: TGTCTTGCTAATTGGATATTTCCTCATGGTATCAAAGACAAAGCAGAATGAGACTCTTGTCCGGATGCTCCTTAATGCTGGCGTAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR CAA 90 bp | ATTGTTGACTTGGATAAAATGAAGTGGACCTTGCCATCACATTGCCATAAAGACGCCATTGAAGCTATCTaGAACATCCACATAATGGTT | + |
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Preference number: 5 (lower is better) Translates to: IVDLDKMKWTLPSHCHKDAIEAI*NIHIMV Trigger: AACCATTATGTGGATGTTCAAGATAGCTTCAATGGC...GTCTTTATGGCAATGTGATGGCAAGGTCCACTTCATTTTATCCAAGTCAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR CAA 90 bp | ATTGTTGACTTGGATAAAATGAAGTGGACCTTGCCATCACATTGCCATAAAGACCTCTCCTTCAAGTTTTaGAGGTTGACATCAGCATTT | + |
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Preference number: 5 (lower is better) Translates to: IVDLDKMKWTLPSHCHKDLSFKF*RLTSAF Trigger: AAATGCTGATGTCAACCTCAAAAACTTGAAGGAGAG...GTCTTTATGGCAATGTGATGGCAAGGTCCACTTCATTTTATCCAAGTCAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS-3UTR CAA 90 bp | TGTGTATCAGTACTAAGATTTTCATCTGCTATTAGACCAGCTGCTCCAAATGAGTTCAAGTTTTTGAGGTaGACATCAGCATTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: CVSVLRFSSAIRPAAPNEFKFLR*TSAFLL Trigger: AAGGAGAAATGCTGATGTCAACCTCAAAAACTTGAA...CTCATTTGGAGCAGCTGGTCTAATAGCAGATGAAAATCTTAGTACTGATACACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS CAA 72 bp | CACATAATGGTTGCTTTCTTTTGCCCACCGCCACACTaGCCCCAAGTCGTTCTGGTAGGCTGCCTGGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HIMVAFFCPPPH*PQVVLVGCLAD Trigger: ATCTGCCAGGCAGCCTACCAGAACGACTTGGGGCAAGTGTGGCGGTGGGCAAAAGAAAGCAACCATTATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS CAA 90 bp | TTGAACATCCACATAATGGTTGCTTTCTTTTGCCCACCGCCACACTaGCCCCAAGTCGTTCTGGTAGGCTGCCTGGCAGATGGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LNIHIMVAFFCPPPH*PQVVLVGCLADGLR Trigger: TCTGAGCCCATCTGCCAGGCAGCCTACCAGAACGACTTGGGGCAAGTGTGGCGGTGGGCAAAAGAAAGCAACCATTATGTGGATGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS CAA 90 bp | CCGCCTGCAGGCACAGATGAGGGGAGTATCGCCATTGAAGCTATCTaGAACATCCACATAATGGTTGCTTTCTTTTGCCCACCGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: PPAGTDEGSIAIEAI*NIHIMVAFFCPPPH Trigger: GTGTGGCGGTGGGCAAAAGAAAGCAACCATTATGTGGATGTTCAAGATAGCTTCAATGGCGATACTCCCCTCATCTGTGCCTGCAGGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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| CDS TCA 72 bp | TCATGGGGTCTGCATGGGCTTCCAGAAGCAGAGGGATaGGAGTCTGGTTTTTCATCTGGCAAGCATAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SWGLHGLPEAEG*ESGFSSGKHSA Trigger: TGCACTATGCTTGCCAGATGAAAAACCAGACTCTCATCCCTCTGCTTCTGGAAGCCCATGCAGACCCCATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025686.9 |
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