Pregenerated sensors for ANKRD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025172Ensembl transcript IDs: ENSMUST00000026172.3, ENSMUST00000238137.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTaGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGG | + |
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Preference number: 1 (lower is better) Translates to: SQHFIVLHLGVFLLD*LQAAHSRGLGAQLR Trigger: CCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCTCATAGTAGGGGGTaGGGTGCCCAGCTCCGGGTA | + |
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Preference number: 3 (lower is better) Translates to: AKPALYCVASRGVPARLAAHSRG*GAQLRV Trigger: TACCCGGAGCTGGGCACCCAACCCCCTACTATGAGC...AGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| 3UTR CCA 72 bp | TTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTaGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCC | + |
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Preference number: 3 (lower is better) Translates to: FIVLHLGVFLLD*LQAAHSRGLGA Trigger: GGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | GACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGGTAGGTGGTCCAGGGATGTCTTaGGCACGCGCTCTTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: DWLQAAHSRGLGAQLRVGGPGMS*ARALGP Trigger: AGGGCCAAGAGCGCGTGCGCAAGACATCCCTGGACC...ACCTACCCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | GACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGGTAGGTAGGAGGCTCCTGGGCTaGAGCCAGGGCATCTCGCTT | + |
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Preference number: 4 (lower is better) Translates to: DWLQAAHSRGLGAQLRVGRRLLG*SQGISL Trigger: AAGCGAGATGCCCTGGCTGCAGCCCAGGAGCCTCCT...ACCTACCCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | GACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGGTAGGTTCCAGGGAGGCCCGATaGAGTGCTGTCCGACGGAAC | + |
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Preference number: 4 (lower is better) Translates to: DWLQAAHSRGLGAQLRVGSREAR*SAVRRN Trigger: GTTCCGTCGGACAGCACTGCATCGGGCCTCCCTGGA...ACCTACCCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | CTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGTCCAGGGAGGCCCGATaGAGTGCTGTCCGACGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LLDWLQAAHSRGLGAQLRSREAR*SAVRRN Trigger: GTTCCGTCGGACAGCACTGCATCGGGCCTCCCTGGA...CCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | CTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGTGCCGGGTGTCTGCTTaGCAGAGCTGGACCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLDWLQAAHSRGLGAQLRCRVSA*QSWTRS Trigger: GGACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCA...CCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | CTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGGGATGCTCCAGGGCATaGCGGGTGTCTGCTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LLDWLQAAHSRGLGAQLRGCSRA*RVSACQ Trigger: CTGGCAAGCAGACACCCGGCATGCCCTGGAGCATCC...CCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | CTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGTCTGGAGGAGGCTCCTaGGCTGCAGCCAGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LLDWLQAAHSRGLGAQLRSGGGS*AAARAS Trigger: AGATGCCCTGGCTGCAGCCCAGGAGCCTCCTCCAGA...CCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | GACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGGTAGGTGCCGGTGATCTCCTCTaGCTCTGGAGGAGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DWLQAAHSRGLGAQLRVGAGDLL*LWRRLL Trigger: CAGGAGCCTCCTCCAGAGCCAGAGGAGATCACCGGC...ACCTACCCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | GACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGGTAGGTGGAGGCCCGATGCAGTaGTGTCCGACGGAACTCATC | + |
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Preference number: 4 (lower is better) Translates to: DWLQAAHSRGLGAQLRVGGGPMQ*CPTELI Trigger: GATGAGTTCCGTCGGACAGCACTGCATCGGGCCTCC...ACCTACCCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR TCA 90 bp | GACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGGTAGGTCAGTCCGTTCTGCTCTaGTTCTGGCTCGGGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: DWLQAAHSRGLGAQLRVGQSVLL*FWLGML Trigger: GAGCATCCCGAGCCAGAATCAGAGCAGAACGGACTG...ACCTACCCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | CTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGGTAGGAGGCCCGATGCAGTaGTGTCCGACGGAACTCATC | + |
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Preference number: 4 (lower is better) Translates to: LDWLQAAHSRGLGAQLRVGGPMQ*CPTELI Trigger: GATGAGTTCCGTCGGACAGCACTGCATCGGGCCTCC...TACCCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | CTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGGTAGTACGGACGGCCACATaGAGGGGAGTGCTCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LDWLQAAHSRGLGAQLRVVRTAT*RGVLSS Trigger: GCTACTGAGCACTCCCCTGCATGTGGCCGTCCGTAC...TACCCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | GTGTTCCTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGTCTGGAGGAGGCTCCTaGGCTGCAGCCAGGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: VFLLDWLQAAHSRGLGAQSGGGS*AAARAS Trigger: AGATGCCCTGGCTGCAGCCCAGGAGCCTCCTCCAGA...CTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAGGAACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | CTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGCCTGGAAGTCCACGGTaGCCCCATTCTCCAGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: LLDWLQAAHSRGLGAQLRPGSPR*PHSPEV Trigger: AACTTCTGGAGAATGGGGCCACCGTGGACTTCCAGG...CCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR TCA 90 bp | GTGTTCCTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCAGTCCGTTCTGCTCTaGTTCTGGCTCGGGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: VFLLDWLQAAHSRGLGAQQSVLL*FWLGML Trigger: GAGCATCCCGAGCCAGAATCAGAGCAGAACGGACTG...CTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAGGAACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | GCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCAGCAGCTCTGTGGCTCTCTaGACCGCCTCGGGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALYCVASRGVPARLAAGSSSVAL*TASGPS Trigger: GGAGGGGCCCGAGGCGGTGCAGAGAGCCACAGAGCT...GCTGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | CACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCAGCTAGCTCTGTGGCTCTCTaGACCGCCTCGGGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFIVLHLGVFLLDWLQAASSVAL*TASGPS Trigger: GGAGGGGCCCGAGGCGGTGCAGAGAGCCACAGAGCT...AGCTGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | CTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGATCATGTCCGCCCCATaGAAGAGCAGCAGTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: LLDWLQAAHSRGLGAQLRIMSAP*KSSSLM Trigger: CATCAAACTGCTGCTCTTGCATGGGGCGGACATGAT...CCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | GTGTTCCTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCCTGGAAGTCCACGGTaGCCCCATTCTCCAGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: VFLLDWLQAAHSRGLGAQPGSPR*PHSPEV Trigger: AACTTCTGGAGAATGGGGCCACCGTGGACTTCCAGG...CTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAGGAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | CTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGTTGCGCACGCGCTCTTaGCCCTTAACCTTTTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LLDWLQAAHSRGLGAQLRLRTRS*PLTFCK Trigger: TTTACAAAAGGTTAAGGGCCAAGAGCGCGTGCGCAA...CCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | CACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCAGCTGCTGGACCAGGTCCGTaGGGGTCTTTCCCGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: HFIVLHLGVFLLDWLQAAAGPGP*GSFPPG Trigger: ACCTGGCGGGAAAGACCCCCACGGACCTGGTCCAGC...AGCTGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | GCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCAGCTCTGCTTGCCAGAGCTaGACCAGGTCCGTGGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ALYCVASRGVPARLAAGSSACQS*TRSVGV Trigger: GACCCCCACGGACCTGGTCCAGCTCTGGCAAGCAGA...GCTGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR TCA 90 bp | CTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGGTATTTTCCTCAGTTCAATaGGGTTCTGGATCCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: LDWLQAAHSRGLGAQLRVFSSVQ*GSGSHP Trigger: TGGGTGGGATCCAGAACCTCATTGAACTGAGGAAAA...TACCCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR TCA 90 bp | CTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGCCAGGTACTTGTCAATaGCTTTCATTTTCCCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LLDWLQAAHSRGLGAQLRPGTCQ*LSFSPP Trigger: TGGAGGGGAAAATGAAAGTCATTGACAAGTACCTGG...CCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | CACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCAGCTGATCTCCTCTGGCTCTaGAGGAGGCTCCTGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HFIVLHLGVFLLDWLQAADLLWL*RRLLGC Trigger: GCAGCCCAGGAGCCTCCTCCAGAGCCAGAGGAGATC...AGCTGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | CACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCAGCTGGCAGGCCCAGTGCATaGCTGTGCAGTCCAGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: HFIVLHLGVFLLDWLQAAGRPSA*LCSPAD Trigger: ATCGGCTGGACTGCACAGCCATGCACTGGGCCTGCC...AGCTGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCTGGACCAGGTCCGTaGGGGTCTTTCCCGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: AKPALYCVASRGVPARLAAGPGP*GSFPPG Trigger: ACCTGGCGGGAAAGACCCCCACGGACCTGGTCCAGC...AGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | CAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGGGTCCAGGGATGTCTTaGGCACGCGCTCTTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: QSQHFIVLHLGVFLLDWLGPGMS*ARALGP Trigger: AGGGCCAAGAGCGCGTGCGCAAGACATCCCTGGACC...CAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | GTGTTCCTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCATTTTCCCCTCCACTaGAGCTTTCAGGAATGTCTC | + |
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Preference number: 4 (lower is better) Translates to: VFLLDWLQAAHSRGLGAQHFPLH*SFQECL Trigger: GAGACATTCCTGAAAGCTGCAGTGGAGGGGAAAATG...CTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAGGAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTTGCCGGGTGTCTGCTTaGCAGAGCTGGACCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: AKPALYCVASRGVPARLACRVSA*QSWTRS Trigger: GGACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCA...AGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGGATGCTCCAGGGCATaGCGGGTGTCTGCTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: AKPALYCVASRGVPARLAGCSRA*RVSACQ Trigger: CTGGCAAGCAGACACCCGGCATGCCCTGGAGCATCC...AGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | GTGTTCCTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGTTGCGCACGCGCTCTTaGCCCTTAACCTTTTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: VFLLDWLQAAHSRGLGAQLRTRS*PLTFCK Trigger: TTTACAAAAGGTTAAGGGCCAAGAGCGCGTGCGCAA...CTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAGGAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | CAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGGCCGGTGATCTCCTCTaGCTCTGGAGGAGGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: QSQHFIVLHLGVFLLDWLAGDLL*LWRRLL Trigger: CAGGAGCCTCCTCCAGAGCCAGAGGAGATCACCGGC...CAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | CAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGGGCAGGCCCAGTGCATaGCTGTGCAGTCCAGCCGAT | + |
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Preference number: 4 (lower is better) Translates to: QSQHFIVLHLGVFLLDWLGRPSA*LCSPAD Trigger: ATCGGCTGGACTGCACAGCCATGCACTGGGCCTGCC...CAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CCA 90 bp | TTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCAGCTCATTCTGCTTGCCAGAGCTaGACCAGGTCCGTGGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: FIVLHLGVFLLDWLQAAHSACQS*TRSVGV Trigger: GACCCCCACGGACCTGGTCCAGCTCTGGCAAGCAGA...ATGAGCTGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR TCA 90 bp | TTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCAGCTCATCAAGCCGCTGCTCGATaGGCTCTGTGGCTCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: FIVLHLGVFLLDWLQAAHQAAAR*ALWLSA Trigger: TGCAGAGAGCCACAGAGCTCATCGAGCAGCGGCTTG...ATGAGCTGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGTACGGACGGCCACATaGAGGGGAGTGCTCAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: AKPALYCVASRGVPARLAVRTAT*RGVLSS Trigger: GCTACTGAGCACTCCCCTGCATGTGGCCGTCCGTAC...AGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR TCA 90 bp | CAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCACTCTGTCTTTGGCATTaGTATCCAAGCCCAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: QHFIVLHLGVFLLDWLQALCLWH*YPSPGK Trigger: TTTCCCTGGGCTTGGATATCAATGCCAAAGACAGAG...TGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | CAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCACATTTTCCCCTCCACTaGAGCTTTCAGGAATGTCTC | + |
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Preference number: 4 (lower is better) Translates to: QHFIVLHLGVFLLDWLQAHFPLH*SFQECL Trigger: GAGACATTCCTGAAAGCTGCAGTGGAGGGGAAAATG...TGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR GCA 90 bp | CAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGATCATGTCCGCCCCATaGAAGAGCAGCAGTTTGATG | + |
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Preference number: 4 (lower is better) Translates to: QSQHFIVLHLGVFLLDWLIMSAP*KSSSLM Trigger: CATCAAACTGCTGCTCTTGCATGGGGCGGACATGAT...CAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR TCA 90 bp | CAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCCAGGTACTTGTCAATaGCTTTCATTTTCCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSQHFIVLHLGVFLLDWLPGTCQ*LSFSPP Trigger: TGGAGGGGAAAATGAAAGTCATTGACAAGTACCTGG...CAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CCA 90 bp | GGCTCGGGATGCTCCAGGGCATGCCGGGTGTCTGCTTGCCAGAGCTaGACCAGGTCCGTGGGGGTCTTTCCCGCCAGGTTCTTAGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GSGCSRACRVSACQS*TRSVGVFPARFLAI Trigger: GATGGCTAAGAACCTGGCGGGAAAGACCCCCACGGACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCATGCCCTGGAGCATCCCGAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS GCA 90 bp | TCTGATTCTGGCTCGGGATGCTCCAGGGCATGCCGGGTGTCTGCTTaGCAGAGCTGGACCAGGTCCGTGGGGGTCTTTCCCGCCAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SDSGSGCSRACRVSA*QSWTRSVGVFPARF Trigger: GAACCTGGCGGGAAAGACCCCCACGGACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCATGCCCTGGAGCATCCCGAGCCAGAATCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS GCA 90 bp | TCCAGTCCGTTCTGCTCTGATTCTGGCTCGGGATGCTCCAGGGCATaGCGGGTGTCTGCTTGCCAGAGCTGGACCAGGTCCGTGGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSPFCSDSGSGCSRA*RVSACQSWTRSVGV Trigger: GACCCCCACGGACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCATGCCCTGGAGCATCCCGAGCCAGAATCAGAGCAGAACGGACTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS GCA 90 bp | CTCCCAGGCCTCTCCAGTCCGTTCTGCTCTGATTCTGGCTCGGGATaGTCCAGGGCATGCCGGGTGTCTGCTTGCCAGAGCTGGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGLSSPFCSDSGSG*SRACRVSACQSWTR Trigger: CCTGGTCCAGCTCTGGCAAGCAGACACCCGGCATGCCCTGGAGCATCCCGAGCCAGAATCAGAGCAGAACGGACTGGAGAGGCCTGGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CAA 90 bp | CTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGGTAAGGTCCAGGGATGTCTaGCGCACGCGCTCTTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LDWLQAAHSRGLGAQLRVRSRDV*RTRSWP Trigger: GGGCCAAGAGCGCGTGCGCAAGACATCCCTGGACCT...TACCCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS TCA 90 bp | AGGTGTCTCACGGCCACTCCCAGGCCTCTCCAGTCCGTTCTGCTCTaGTTCTGGCTCGGGATGCTCCAGGGCATGCCGGGTGTCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RCLTATPRPLQSVLL*FWLGMLQGMPGVCL Trigger: CAAGCAGACACCCGGCATGCCCTGGAGCATCCCGAGCCAGAATCAGAGCAGAACGGACTGGAGAGGCCTGGGAGTGGCCGTGAGACACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CCA 90 bp | AGCTTCCCAGGAGCGGATCTTCGAAGTTTCTCAGTCTCTTCCTCCTaGGCAAGCCGCTGCTCGATGAGCTCTGTGGCTCTCTGCACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFPGADLRSFSVSSS*ASRCSMSSVALCTA Trigger: GGCGGTGCAGAGAGCCACAGAGCTCATCGAGCAGCGGCTTGCCCAGGAGGAAGAGACTGAGAAACTTCGAAGATCCGCTCCTGGGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CAA 90 bp | CTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCTCCGGTCCCCTTCTCTGTCTTaGGCATTGATATCCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLDWLQAAHSRGLGAQLRSPSLS*ALISKP Trigger: GGGCTTGGATATCAATGCCAAAGACAGAGAAGGGGA...CCGGAGCTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CAA 90 bp | CAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGAGGTCCAGGGATGTCTaGCGCACGCGCTCTTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QSQHFIVLHLGVFLLDWLRSRDV*RTRSWP Trigger: GGGCCAAGAGCGCGTGCGCAAGACATCCCTGGACCT...CAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CAA 90 bp | CACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCAGCTATGCCGGGTGTCTGCTaGCCAGAGCTGGACCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HFIVLHLGVFLLDWLQAAMPGVC*PELDQV Trigger: GACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCAT...AGCTGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS GCA 90 bp | AGAAAATGTTCCACAATCTCCACGTGTCCAGTACGGACGGCCACATaGAGGGGAGTGCTCAGTAGCTTGTCTCTCACGTTGGTGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKCSTISTCPVRTAT*RGVLSSLSLTLVSA Trigger: GGCCGACACCAACGTGAGAGACAAGCTACTGAGCACTCCCCTGCATGTGGCCGTCCGTACTGGACACGTGGAGATTGTGGAACATTTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CAA 90 bp | GTGTTCCTGCTAGACTGGCTGCAGGCAGCTCATAGTAGGGGGTTGGGTGCCCAGCCGTCCGCCAGGTACTaGTCAATGACTTTCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFLLDWLQAAHSRGLGAQPSARY*SMTFIF Trigger: GAAAATGAAAGTCATTGACAAGTACCTGGCGGACGG...CTGGGCACCCAACCCCCTACTATGAGCTGCCTGCAGCCAGTCTAGCAGGAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CAA 90 bp | CAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGATGCCGGGTGTCTGCTaGCCAGAGCTGGACCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QSQHFIVLHLGVFLLDWLMPGVC*PELDQV Trigger: GACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCAT...CAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS TCA 90 bp | TTGCGCACGCGCTCTTGGCCCTTAACCTTTTGTAAAGCAGGACTCTaGACCCCGAGGCGCTTCTCTTCCTCTAGCACTAGCATGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LRTRSWPLTFCKAGL*TPRRFSSSSTSMSM Trigger: CATGGACATGCTAGTGCTAGAGGAAGAGAAGCGCCTCGGGGTTCAGAGTCCTGCTTTACAAAAGGTTAAGGGCCAAGAGCGCGTGCGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS GCA 90 bp | TCCGTCCGCCAGGTACTTGTCAATGACTTTCATTTTCCCCTCCACTaGAGCTTTCAGGAATGTCTCCTCATTCACAGGGCCGGTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SVRQVLVNDFHFPLH*SFQECLLIHRAGDL Trigger: GAGATCACCGGCCCTGTGAATGAGGAGACATTCCTGAAAGCTGCAGTGGAGGGGAAAATGAAAGTCATTGACAAGTACCTGGCGGACGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CAA 90 bp | CAAAGCCAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGGGAGTGCTCAGTAGCTaGTCTCTCACGTTGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QSQHFIVLHLGVFLLDWLGVLSS*SLTLVS Trigger: CGACACCAACGTGAGAGACAAGCTACTGAGCACTCC...CAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTGGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS-3UTR CAA 90 bp | CAGCACTTTATTGTGTTGCATCTAGGGGTGTTCCTGCTAGACTGGCTGCAGGCACCGTCCGCCAGGTACTaGTCAATGACTTTCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QHFIVLHLGVFLLDWLQAPSARY*SMTFIF Trigger: GAAAATGAAAGTCATTGACAAGTACCTGGCGGACGG...TGCCTGCAGCCAGTCTAGCAGGAACACCCCTAGATGCAACACAATAAAGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS TCA 90 bp | TCACGGCATCATGTAGGGCACTGTCCCCTTCTCTGTCTTTGGCATTaGTATCCAAGCCCAGGGAAAGAAAATGTTCCACAATCTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: SRHHVGHCPLLCLWH*YPSPGKENVPQSPR Trigger: ACGTGGAGATTGTGGAACATTTTCTTTCCCTGGGCTTGGATATCAATGCCAAAGACAGAGAAGGGGACAGTGCCCTACATGATGCCGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CCA 72 bp | TGCTCCAGGGCATGCCGGGTGTCTGCTTGCCAGAGCTaGACCAGGTCCGTGGGGGTCTTTCCCGCCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSRACRVSACQS*TRSVGVFPARF Trigger: GAACCTGGCGGGAAAGACCCCCACGGACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCATGCCCTGGAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CAA 72 bp | TGGCTCGGGATGCTCCAGGGCATGCCGGGTGTCTGCTaGCCAGAGCTGGACCAGGTCCGTGGGGGTCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: WLGMLQGMPGVC*PELDQVRGGLS Trigger: GGAAAGACCCCCACGGACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCATGCCCTGGAGCATCCCGAGCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS GCA 72 bp | TTCTGGCTCGGGATGCTCCAGGGCATGCCGGGTGTCTaGTTGCCAGAGCTGGACCAGGTCCGTGGGGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FWLGMLQGMPGV*LPELDQVRGGL Trigger: AAGACCCCCACGGACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCATGCCCTGGAGCATCCCGAGCCAGAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS GCA 72 bp | TTCTGCTCTGATTCTGGCTCGGGATGCTCCAGGGCATaGCGGGTGTCTGCTTGCCAGAGCTGGACCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FCSDSGSGCSRA*RVSACQSWTRS Trigger: GGACCTGGTCCAGCTCTGGCAAGCAGACACCCGGCATGCCCTGGAGCATCCCGAGCCAGAATCAGAGCAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS GCA 72 bp | CTCTCCAGTCCGTTCTGCTCTGATTCTGGCTCGGGATaGTCCAGGGCATGCCGGGTGTCTGCTTGCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSSPFCSDSGSG*SRACRVSACQS Trigger: GCTCTGGCAAGCAGACACCCGGCATGCCCTGGAGCATCCCGAGCCAGAATCAGAGCAGAACGGACTGGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS GCA 72 bp | TCCACAATCTCCACGTGTCCAGTACGGACGGCCACATaGAGGGGAGTGCTCAGTAGCTTGTCTCTCACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: STISTCPVRTAT*RGVLSSLSLTL Trigger: CAACGTGAGAGACAAGCTACTGAGCACTCCCCTGCATGTGGCCGTCCGTACTGGACACGTGGAGATTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CCA 72 bp | TGGCTGTGCAGTCCAGCCGATCCTGGAAGTCCACGGTaGCCCCATTCTCCAGAAGTTTCTCCAGTATCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WLCSPADPGSPR*PHSPEVSPVSP Trigger: TGGAGATACTGGAGAAACTTCTGGAGAATGGGGCCACCGTGGACTTCCAGGATCGGCTGGACTGCACAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS TCA 72 bp | CAGTGCTGTCCGACGGAACTCATCACAGGTGTCCGCTaGACCTCCGTCCGCCAGGTACTTGTCAATGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: QCCPTELITGVR*TSVRQVLVNDF Trigger: AAAGTCATTGACAAGTACCTGGCGGACGGAGGTTCAGCGGACACCTGTGATGAGTTCCGTCGGACAGCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CAA 90 bp | ATCCCACCCACATCAATGATCTCACGTCGCAGGTCCAGGGATGTCTaGCGCACGCGCTCTTGGCCCTTAACCTTTTGTAAAGCAGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: IPPTSMISRRRSRDV*RTRSWPLTFCKAGL Trigger: GAGTCCTGCTTTACAAAAGGTTAAGGGCCAAGAGCGCGTGCGCAAGACATCCCTGGACCTGCGACGTGAGATCATTGATGTGGGTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS TCA 72 bp | CGCTCTTGGCCCTTAACCTTTTGTAAAGCAGGACTCTaGACCCCGAGGCGCTTCTCTTCCTCTAGCACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSWPLTFCKAGL*TPRRFSSSSTS Trigger: GCTAGTGCTAGAGGAAGAGAAGCGCCTCGGGGTTCAGAGTCCTGCTTTACAAAAGGTTAAGGGCCAAGAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CAA 72 bp | TCACAGGTGTCCGCTGAACCTCCGTCCGCCAGGTACTaGTCAATGACTTTCATTTTCCCCTCCACTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SQVSAEPPSARY*SMTFIFPSTAA Trigger: AGCTGCAGTGGAGGGGAAAATGAAAGTCATTGACAAGTACCTGGCGGACGGAGGTTCAGCGGACACCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CAA 90 bp | CGGAACTCATCACAGGTGTCCGCTGAACCTCCGTCCGCCAGGTACTaGTCAATGACTTTCATTTTCCCCTCCACTGCAGCTTTCAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RNSSQVSAEPPSARY*SMTFIFPSTAAFRN Trigger: ATTCCTGAAAGCTGCAGTGGAGGGGAAAATGAAAGTCATTGACAAGTACCTGGCGGACGGAGGTTCAGCGGACACCTGTGATGAGTTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CAA 72 bp | ACATCAATGATCTCACGTCGCAGGTCCAGGGATGTCTaGCGCACGCGCTCTTGGCCCTTAACCTTTTGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: TSMISRRRSRDV*RTRSWPLTFCK Trigger: TTTACAAAAGGTTAAGGGCCAAGAGCGCGTGCGCAAGACATCCCTGGACCTGCGACGTGAGATCATTGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CAA 90 bp | CTCACGGCATCATGTAGGGCACTGTCCCCTTCTCTGTCTTTGGCATaGATATCCAAGCCCAGGGAAAGAAAATGTTCCACAATCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LTASCRALSPSLSLA*ISKPRERKCSTIST Trigger: CGTGGAGATTGTGGAACATTTTCTTTCCCTGGGCTTGGATATCAATGCCAAAGACAGAGAAGGGGACAGTGCCCTACATGATGCCGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS GCA 72 bp | CAGGTACTTGTCAATGACTTTCATTTTCCCCTCCACTaGAGCTTTCAGGAATGTCTCCTCATTCACAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QVLVNDFHFPLH*SFQECLLIHRA Trigger: GGCCCTGTGAATGAGGAGACATTCCTGAAAGCTGCAGTGGAGGGGAAAATGAAAGTCATTGACAAGTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CAA 72 bp | ACGGCATCATGTAGGGCACTGTCCCCTTCTCTGTCTTaGGCATTGATATCCAAGCCCAGGGAAAGAAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: TASCRALSPSLS*ALISKPRERKC Trigger: ACATTTTCTTTCCCTGGGCTTGGATATCAATGCCAAAGACAGAGAAGGGGACAGTGCCCTACATGATGCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CAA 90 bp | TTGAGTCTCACGGCATCATGTAGGGCACTGTCCCCTTCTCTGTCTTaGGCATTGATATCCAAGCCCAGGGAAAGAAAATGTTCCACAATC | + |
|
Preference number: 6 (lower is better) Translates to: LSLTASCRALSPSLS*ALISKPRERKCSTI Trigger: GATTGTGGAACATTTTCTTTCCCTGGGCTTGGATATCAATGCCAAAGACAGAGAAGGGGACAGTGCCCTACATGATGCCGTGAGACTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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| CDS CAA 72 bp | TCATGTAGGGCACTGTCCCCTTCTCTGTCTTTGGCATaGATATCCAAGCCCAGGGAAAGAAAATGTTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SCRALSPSLSLA*ISKPRERKCST Trigger: TGTGGAACATTTTCTTTCCCTGGGCTTGGATATCAATGCCAAAGACAGAGAAGGGGACAGTGCCCTACATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026172.3 ENSMUST00000238137.2 |
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