Pregenerated sensors for ANKRD16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047909Ensembl transcript IDs: ENSMUST00000056108.12, ENSMUST00000128774.3, ENSMUST00000130186.2, ENSMUST00000133664.8, ENSMUST00000156067.8
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCAAGACCGCATACCAGGAACCGTATGGCTTCATCCTGCCCAGTaGCTGCTGCGCGGTGTAGAGCCTGGGCCCCCATGCTATCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: CQDRIPGTVWLHPAQ*LLRGVEPGPPCYLQ Trigger: CTGCAGATAGCATGGGGGCCCAGGCTCTACACCGCGCAGCAGTCACTGGGCAGGATGAAGCCATACGGTTCCTGGTATGCGGTCTTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133664.8 ENSMUST00000156067.8 |
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| 3UTR GCA 90 bp | ACATCGATGCCAAGACCGCATACCAGGAACCGTATGGCTTCATCCTaGCCAGTGACTGCTGCGCGGTGTAGAGCCTGGGCCCCCATGCTA | + |
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Preference number: 1 (lower is better) Translates to: TSMPRPHTRNRMASS*PVTAARCRAWAPML Trigger: TAGCATGGGGGCCCAGGCTCTACACCGCGCAGCAGTCACTGGGCAGGATGAAGCCATACGGTTCCTGGTATGCGGTCTTGGCATCGATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133664.8 ENSMUST00000156067.8 |
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| 3UTR CCA 90 bp | CGTATGGCTTCATCCTGCCCAGTGACTGCTGCGCGGTGTAGAGCCTaGGCCCCCATGCTATCTGCAGCTGAAGAGCAAGCCTTATGCTGT | + |
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Preference number: 1 (lower is better) Translates to: RMASSCPVTAARCRA*APMLSAAEEQALCC Trigger: ACAGCATAAGGCTTGCTCTTCAGCTGCAGATAGCATGGGGGCCCAGGCTCTACACCGCGCAGCAGTCACTGGGCAGGATGAAGCCATACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR TCA 90 bp | TCCTTCAGTCCCGACTGTAGGAGGAGCCTGGTGCAAGCCACATGCTaGCCTGCGCAGGCCAGATGCAGGACTGAGCGATTTCTTTCATCT | + |
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Preference number: 1 (lower is better) Translates to: SFSPDCRRSLVQATC*PAQARCRTERFLSS Trigger: AGATGAAAGAAATCGCTCAGTCCTGCATCTGGCCTGCGCAGGTCAGCATGTGGCTTGCACCAGGCTCCTCCTACAGTCGGGACTGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR TCA 90 bp | CCTGGTGCAAGCCACATGCTGACCTGCGCAGGCCAGATGCAGGACTaGGCGATTTCTTTCATCTGTAGAGTTGATGTCGGCACCCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: PGASHMLTCAGQMQD*AISFICRVDVGTQG Trigger: TCCTTGGGTGCCGACATCAACTCTACAGATGAAAGAAATCGCTCAGTCCTGCATCTGGCCTGCGCAGGTCAGCATGTGGCTTGCACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR TCA 90 bp | TCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGGAGATaGAAACGCTGGCCGAGAAGGAACTCGATACCCTGTCTCTCAGCA | + |
|
Preference number: 1 (lower is better) Translates to: SFDRRACRRKGSRRR*KRWPRRNSIPCLSA Trigger: TGCTGAGAGACAGGGTATCGAGTTCCTTCTCGGCCAGCGTTTTCATCTCCTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR CCA 90 bp | ATGGCTACGTTCAAGATCACACAACATGCCAGGAATCCAGACTCCTaGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: MATFKITQHARNPDS*SFDRRACRRKGSRR Trigger: CCTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTCTGGATTCCTGGCATGTTGTGTGATCTTGAACGTAGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR GCA 90 bp | CTGTTCAAGGAGCAGCTTGGCTATACTAACATGGCCACACTGAATTaGATCCATGAAGGGCGTGACACCACAGTTGTCTCGACAGTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: LFKEQLGYTNMATLN*IHEGRDTTVVSTVW Trigger: CCAGACTGTCGAGACAACTGTGGTGTCACGCCCTTCATGGATGCAATTCAGTGTGGCCATGTTAGTATAGCCAAGCTGCTCCTTGAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR TCA 90 bp | CGTCTGTCCTTCCTTTGCTGCATAGTGAAGTGCTGTGAGCTGGCTTaGCTTTGCTCTTACATCTACATCGATGCCAAGACCGCATACCAG | + |
|
Preference number: 1 (lower is better) Translates to: RLSFLCCIVKCCELA*LCSYIYIDAKTAYQ Trigger: CTGGTATGCGGTCTTGGCATCGATGTAGATGTAAGAGCAAAGTCAAGCCAGCTCACAGCACTTCACTATGCAGCAAAGGAAGGACAGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR CCA 90 bp | CTAGCACCTCCAGTTCTAACAGATCTGATGCCTTCTTCTGGCCACTaGGGCATCTGCACATATGTGGCACTGAGCGATTTCTTTCATCTG | + |
|
Preference number: 1 (lower is better) Translates to: LAPPVLTDLMPSSGH*GICTYVALSDFFHL Trigger: CAGATGAAAGAAATCGCTCAGTGCCACATATGTGCAGATGCCCCAGTGGCCAGAAGAAGGCATCAGATCTGTTAGAACTGGAGGTGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
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| 3UTR TCA 90 bp | GGTGTTGGAACTCTTTGCTGCATAGTGAAGTGCTGTGAGCTGGCTTaGCTTTGCTCTTACATCTACATCGATGCCAAGACCGCATACCAG | + |
|
Preference number: 1 (lower is better) Translates to: GVGTLCCIVKCCELA*LCSYIYIDAKTAYQ Trigger: CTGGTATGCGGTCTTGGCATCGATGTAGATGTAAGAGCAAAGTCAAGCCAGCTCACAGCACTTCACTATGCAGCAAAGAGTTCCAACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
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| 3UTR TCA 90 bp | TTATGCTGTTCAAGGAGCAGCTTGGCTATACTAACATGGCCACACTaGATTGCATCCATGAAGGGCGTGACACCACAGTTGTCTCGACAG | + |
|
Preference number: 1 (lower is better) Translates to: LCCSRSSLAILTWPH*IASMKGVTPQLSRQ Trigger: CTGTCGAGACAACTGTGGTGTCACGCCCTTCATGGATGCAATTCAGTGTGGCCATGTTAGTATAGCCAAGCTGCTCCTTGAACAGCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR TCA 90 bp | GAACTGTATTCGTCTGTCCTTCCTTTGCTGCATAGTGAAGTGCTGTaGGCTGGCTTGACTTTGCTCTTACATCTACATCGATGCCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: ELYSSVLPLLHSEVL*AGLTLLLHLHRCQD Trigger: GTCTTGGCATCGATGTAGATGTAAGAGCAAAGTCAAGCCAGCTCACAGCACTTCACTATGCAGCAAAGGAAGGACAGACGAATACAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR TCA 90 bp | CCAAGATCCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTaGGTGTGTGAAAGTTCTCAGTTTAACCCTCATTACAGTTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: PRSGAGDVLQWHSTC*VCESSQFNPHYSLK Trigger: TTTTAAACTGTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGGATCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR TCA 90 bp | CTTTCATCTGTAGAGTTGATGTCGGCACCCAAGGACAACAGAGTTTaGACTGTATTCGTCTGTCCTTCCTCATGTTTTCCAAGGAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: LSSVELMSAPKDNRV*TVFVCPSSCFPRKS Trigger: GCTCTTCCTTGGAAAACATGAGGAAGGACAGACGAATACAGTTCAAACTCTGTTGTCCTTGGGTGCCGACATCAACTCTACAGATGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000133664.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCTGCTGGGCCAAGGTGCCTGTGAGGTCTTCGGAATCCTTCAGTCCCGACGGCAGCAGGAGGAGATaGAAACGCTGGCCGAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VSCWAKVPVRSSESFSPDGSRRR*KRWPRR Trigger: CCTTCTCGGCCAGCGTTTTCATCTCCTCCTGCTGCC...GTCGGGACTGAAGGATTCCGAAGACCTCACAGGCACCTTGGCCCAGCAGCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCTTCGGAATCCTTCAGTCCCGACTGTAGGAGGAGCCTGGTGCAAGCCACATGGCAGCAGGAGGAGATaGAAACGCTGGCCGAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLRNPSVPTVGGAWCKPHGSRRR*KRWPRR Trigger: CCTTCTCGGCCAGCGTTTTCATCTCCTCCTGCTGCC...ATGTGGCTTGCACCAGGCTCCTCCTACAGTCGGGACTGAAGGATTCCGAAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR GCA 90 bp | TACGCTTCTCGTGAGCTGCTGGGCCAAGGTGCCTGTGAGGTCTTCGGAATCCTTAGCCACATGCTGACCTaGGCAGGCCAGATGCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: YASRELLGQGACEVFGILSHMLT*AGQMQD Trigger: GTCCTGCATCTGGCCTGCGCAGGTCAGCATGTGGCT...AAGGATTCCGAAGACCTCACAGGCACCTTGGCCCAGCAGCTCACGAGAAGCGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR TCA 90 bp | AATCCTTCAGTCCCGACTGTAGGAGGAGCCTGGTGCAAGCCACATGCTGACCTGGGGCCAAGGTGCCTGTaGGGTCTTCGGAATCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: NPSVPTVGGAWCKPHADLGPRCL*GLRNPS Trigger: TGAAGGATTCCGAAGACCTCACAGGCACCTTGGCCC...CAGGTCAGCATGTGGCTTGCACCAGGCTCCTCCTACAGTCGGGACTGAAGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCCAGTTCTAACAGATCTGATGCCTTCTTCTGGCCACTGGGGCATCTGCACAAGCCACATGCTGACCTaGGCAGGCCAGATGCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PPVLTDLMPSSGHWGICTSHMLT*AGQMQD Trigger: GTCCTGCATCTGGCCTGCGCAGGTCAGCATGTGGCT...TGTGCAGATGCCCCAGTGGCCAGAAGAAGGCATCAGATCTGTTAGAACTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCCAGTTCTAACAGATCTGATGCCTTCTTCTGGCCACTGGGGCATCTGCACAGAGCCTGGGCCCCCATaGTATCTGCAGCTGAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PPVLTDLMPSSGHWGICTEPGPP*YLQLKS Trigger: GCTCTTCAGCTGCAGATAGCATGGGGGCCCAGGCTC...TGTGCAGATGCCCCAGTGGCCAGAAGAAGGCATCAGATCTGTTAGAACTGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCGTGAGCTGCTGGGCCAAGGTGCCTGTGAGGTCTTCGGAATCCTTCAGTCCGGCCAGATGCAGGACTaGGCGATTTCTTTCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: SRELLGQGACEVFGILQSGQMQD*AISFIC Trigger: ACAGATGAAAGAAATCGCTCAGTCCTGCATCTGGCC...GGACTGAAGGATTCCGAAGACCTCACAGGCACCTTGGCCCAGCAGCTCACGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGAGGTCTTCGGAATCCTTCAGTCCCGACTGTAGGAGGAGCCTGGTGCAATTCGACCGAAGAGCATaGAGAAGGAAAGGCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PVRSSESFSPDCRRSLVQFDRRA*RRKGSR Trigger: CCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAA...TTGCACCAGGCTCCTCCTACAGTCGGGACTGAAGGATTCCGAAGACCTCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTACGCTTCTCGTGAGCTGCTGGGCCAAGGTGCCTGTGAGGTCTTCGGAATCCATGCTATCTGCAGCTaGAGAGCAAGCCTTATGCTG | + |
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Preference number: 2 (lower is better) Translates to: IYASRELLGQGACEVFGIHAICS*RASLML Trigger: CAGCATAAGGCTTGCTCTTCAGCTGCAGATAGCATG...GATTCCGAAGACCTCACAGGCACCTTGGCCCAGCAGCTCACGAGAAGCGTAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCAAGATCCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTTTCGACCGAAGAGCATaGAGAAGGAAAGGCAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SQDPGLVMCFSGIALAECFDRRA*RRKGSR Trigger: CCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAA...ACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGGATCTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGAGGTCTTCGGAATCCTTCAGTCCCGACTGTAGGAGGAGCCTGGTGCAAATGGCCACACTGAATTaGATCCATGAAGGGCGTGAC | + |
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Preference number: 2 (lower is better) Translates to: PVRSSESFSPDCRRSLVQMATLN*IHEGRD Trigger: GTCACGCCCTTCATGGATGCAATTCAGTGTGGCCAT...TTGCACCAGGCTCCTCCTACAGTCGGGACTGAAGGATTCCGAAGACCTCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTACGCTTCTCGTGAGCTGCTGGGCCAAGGTGCCTGTGAGGTCTTCGGAATCTGCTGTGAGCTGGCTTaGCTTTGCTCTTACATCTAC | + |
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Preference number: 2 (lower is better) Translates to: IYASRELLGQGACEVFGICCELA*LCSYIY Trigger: GTAGATGTAAGAGCAAAGTCAAGCCAGCTCACAGCA...GATTCCGAAGACCTCACAGGCACCTTGGCCCAGCAGCTCACGAGAAGCGTAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCACTGTAGGAGGAGCCTaGTGCAAGCCACATGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: GLVMCFSGIALAECVKVLTVGGA*CKPHAD Trigger: GTCAGCATGTGGCTTGCACCAGGCTCCTCCTACAGT...GAGAACTTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR CAA 90 bp | AGCCACATGCTGACCTGCGCAGGCCAGATGCAGGACTCACATATATaGTTATGGCTTCAAATAGCAGTCGTCGGAGAGATGTCTCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SHMLTCAGQMQDSHI*LWLQIAVVGEMSQQ Trigger: CTGCTGAGACATCTCTCCGACGACTGCTATTTGAAGCCATAACAATATATGTGAGTCCTGCATCTGGCCTGCGCAGGTCAGCATGTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCTTCGGAATCCTTCAGTCCCGACTGTAGGAGGAGCCTGGTGCAAGCCACATAAGGACAACAGAGTTTaGACTGTATTCGTCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GLRNPSVPTVGGAWCKPHKDNRV*TVFVCP Trigger: AGGACAGACGAATACAGTTCAAACTCTGTTGTCCTT...ATGTGGCTTGCACCAGGCTCCTCCTACAGTCGGGACTGAAGGATTCCGAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR GCA 90 bp | GATCCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTGTGAAACAAGATCACACAACATaGCAGGAATCCAGACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: DPGLVMCFSGIALAECVKQDHTT*QESRLL Trigger: CAGGAGTCTGGATTCCTGGCATGTTGTGTGATCTTG...TTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCAAGGACAACAGAGTTTGAACTGTATTCGTCTGTCCTTCCTTTGCTGCATAGAGCCTGGGCCCCCATaGTATCTGCAGCTGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: TQGQQSLNCIRLSFLCCIEPGPP*YLQLKS Trigger: GCTCTTCAGCTGCAGATAGCATGGGGGCCCAGGCTC...TATGCAGCAAAGGAAGGACAGACGAATACAGTTCAAACTCTGTTGTCCTTGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR-3UTR TCA 90 bp | GGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCAGTTTAACCCTCATTACAGTTGGCAGCAGGAGGAGATaGAAACGCTGGCCGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: GIALAECVKVLSLTLITVGSRRR*KRWPRR Trigger: CCTTCTCGGCCAGCGTTTTCATCTCCTCCTGCTGCC...AACTGTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR TCA 90 bp | CCACATGCTGACCTGCGCAGGCCAGATGCAGGACTGAGCGATTTCTTTCATCTGAAGGACAACAGAGTTTaGACTGTATTCGTCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PHADLRRPDAGLSDFFHLKDNRV*TVFVCP Trigger: AGGACAGACGAATACAGTTCAAACTCTGTTGTCCTT...CAGATGAAAGAAATCGCTCAGTCCTGCATCTGGCCTGCGCAGGTCAGCATGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCAAGGACAACAGAGTTTGAACTGTATTCGTCTGTCCTTCCTTTGCTGCATAGTAGGAGGAGCCTGGTaGAAGCCACATGCTGACCTG | + |
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Preference number: 2 (lower is better) Translates to: TQGQQSLNCIRLSFLCCIVGGAW*KPHADL Trigger: CAGGTCAGCATGTGGCTTGCACCAGGCTCCTCCTAC...TATGCAGCAAAGGAAGGACAGACGAATACAGTTCAAACTCTGTTGTCCTTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCAAGGACAACAGAGTTTGAACTGTATTCGTCTGTCCTTCCTTTGCTGCATAACTGTAGGAGGAGCCTaGTGCAAGCCACATGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: TQGQQSLNCIRLSFLCCITVGGA*CKPHAD Trigger: GTCAGCATGTGGCTTGCACCAGGCTCCTCCTACAGT...TATGCAGCAAAGGAAGGACAGACGAATACAGTTCAAACTCTGTTGTCCTTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR CAA 90 bp | TCTTTCATCTGTAGAGTTGATGTCGGCACCCAAGGACAACAGAGTTaGAACTGTATTCGTCTGTCCTTCCTTTGCTGCATAGTGAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: SFICRVDVGTQGQQS*NCIRLSFLCCIVKC Trigger: GCACTTCACTATGCAGCAAAGGAAGGACAGACGAATACAGTTCAAACTCTGTTGTCCTTGGGTGCCGACATCAACTCTACAGATGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR TCA 72 bp | CGCATACCAGGAACCGTATGGCTTCATCCTGCCCAGTaGCTGCTGCGCGGTGTAGAGCCTGGGCCCCCATGC | + |
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Preference number: 3 (lower is better) Translates to: RIPGTVWLHPAQ*LLRGVEPGPPC Trigger: GCATGGGGGCCCAGGCTCTACACCGCGCAGCAGTCACTGGGCAGGATGAAGCCATACGGTTCCTGGTATGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133664.8 ENSMUST00000156067.8 |
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| 3UTR GCA 72 bp | CCAAGACCGCATACCAGGAACCGTATGGCTTCATCCTaGCCAGTGACTGCTGCGCGGTGTAGAGCCTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: PRPHTRNRMASS*PVTAARCRAWA Trigger: GGCCCAGGCTCTACACCGCGCAGCAGTCACTGGGCAGGATGAAGCCATACGGTTCCTGGTATGCGGTCTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133664.8 ENSMUST00000156067.8 |
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| 3UTR CCA 72 bp | TCATCCTGCCCAGTGACTGCTGCGCGGTGTAGAGCCTaGGCCCCCATGCTATCTGCAGCTGAAGAGCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: SSCPVTAARCRA*APMLSAAEEQA Trigger: GGCTTGCTCTTCAGCTGCAGATAGCATGGGGGCCCAGGCTCTACACCGCGCAGCAGTCACTGGGCAGGATGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133664.8 ENSMUST00000156067.8 |
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| 3UTR TCA 72 bp | CCCGACTGTAGGAGGAGCCTGGTGCAAGCCACATGCTaGCCTGCGCAGGCCAGATGCAGGACTGAGCGATTT | + |
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Preference number: 3 (lower is better) Translates to: PDCRRSLVQATC*PAQARCRTERF Trigger: AAATCGCTCAGTCCTGCATCTGGCCTGCGCAGGTCAGCATGTGGCTTGCACCAGGCTCCTCCTACAGTCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR-3UTR CAA 90 bp | CATCTACATCGATGCCAAGACCGCATACCAGGAACCGTATGGCTTCATCCTGCCGGCGTGACACCACAGTaGTCTCGACAGTCTGGTTCA | + |
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Preference number: 3 (lower is better) Translates to: HLHRCQDRIPGTVWLHPAGVTPQ*SRQSGS Trigger: TGAACCAGACTGTCGAGACAACTGTGGTGTCACGCC...GGCAGGATGAAGCCATACGGTTCCTGGTATGCGGTCTTGGCATCGATGTAGATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| 3UTR TCA 72 bp | CGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGGAGATaGAAACGCTGGCCGAGAAGGAACTCGATACCCTGT | + |
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Preference number: 3 (lower is better) Translates to: RRACRRKGSRRR*KRWPRRNSIPC Trigger: ACAGGGTATCGAGTTCCTTCTCGGCCAGCGTTTTCATCTCCTCCTGCTGCCTTTCCTTCTGCATGCTCTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 ENSMUST00000156067.8 |
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| 3UTR CCA 72 bp | AGCACCTCCAGTTCTAACAGATCTGATGCCTTCTTCTaGCCACTGGGGCATCTGCACATATGTGGCACTGAG | + |
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Preference number: 3 (lower is better) Translates to: STSSSNRSDAFF*PLGHLHICGTE Trigger: CTCAGTGCCACATATGTGCAGATGCCCCAGTGGCCAGAAGAAGGCATCAGATCTGTTAGAACTGGAGGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
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| 3UTR-3UTR CAA 90 bp | CCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTTTCATCTGTAGAGTaGATGTCGGCACCCAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PGLVMCFSGIALAECVKVLSSVE*MSAPKD Trigger: GTCCTTGGGTGCCGACATCAACTCTACAGATGAAAG...AACTTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCCTTTCATCTGTAGAGTaGATGTCGGCACCCAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GLVMCFSGIALAECVKVLLSSVE*MSAPKD Trigger: GTCCTTGGGTGCCGACATCAACTCTACAGATGAAAG...GAGAACTTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000156067.8 |
||
| 3UTR TCA 72 bp | CTTCTGGCCACTGGGGCATCTGCACATATGTGGCACTaGGCGATTTCTTTCATCTGTAGAGTTGATGTCGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLATGASAHMWH*AISFICRVDVG Trigger: GCCGACATCAACTCTACAGATGAAAGAAATCGCTCAGTGCCACATATGTGCAGATGCCCCAGTGGCCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
||
| 3UTR GCA 72 bp | GAGCAGCTTGGCTATACTAACATGGCCACACTGAATTaGATCCATGAAGGGCGTGACACCACAGTTGTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: EQLGYTNMATLN*IHEGRDTTVVS Trigger: CGAGACAACTGTGGTGTCACGCCCTTCATGGATGCAATTCAGTGTGGCCATGTTAGTATAGCCAAGCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| 3UTR CCA 72 bp | CCAGTTCTAACAGATCTGATGCCTTCTTCTGGCCACTaGGGCATCTGCACATATGTGGCACTGAGCGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: PVLTDLMPSSGH*GICTYVALSDF Trigger: GAAATCGCTCAGTGCCACATATGTGCAGATGCCCCAGTGGCCAGAAGAAGGCATCAGATCTGTTAGAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
||
| 3UTR TCA 72 bp | GATACCCTGTCTCTCAGCAACAGAAGGAGCAGAATATaGACGGCCTTGAACTCCATCGCCTCCTTCTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DTLSLSNRRSRI*TALNSIASFFK Trigger: CTTGAAGAAGGAGGCGATGGAGTTCAAGGCCGTTCATATTCTGCTCCTTCTGTTGCTGAGAGACAGGGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 ENSMUST00000156067.8 |
||
| 3UTR TCA 72 bp | TCAAGGAGCAGCTTGGCTATACTAACATGGCCACACTaGATTGCATCCATGAAGGGCGTGACACCACAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SRSSLAILTWPH*IASMKGVTPQL Trigger: CAACTGTGGTGTCACGCCCTTCATGGATGCAATTCAGTGTGGCCATGTTAGTATAGCCAAGCTGCTCCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| 3UTR GCA 72 bp | ACAGATCTGATGCCTTCTTCTGGCCACTGGGGCATCTaGACATATGTGGCACTGAGCGATTTCTTTCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: TDLMPSSGHWGI*TYVALSDFFHL Trigger: CAGATGAAAGAAATCGCTCAGTGCCACATATGTGCAGATGCCCCAGTGGCCAGAAGAAGGCATCAGATCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
||
| 3UTR TCA 72 bp | GGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTaGGTGTGTGAAAGTTCTCAGTTTAACCCTCATTAC | + |
|
Preference number: 3 (lower is better) Translates to: GAGDVLQWHSTC*VCESSQFNPHY Trigger: GTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 ENSMUST00000156067.8 |
||
| 3UTR TCA 72 bp | CAAGGAAGAGCTTACGCTATGCAAACGTGGCTGAACTaGAGTGTATCCATGAAGGGTGTGACACCACAGATC | + |
|
Preference number: 3 (lower is better) Translates to: QGRAYAMQTWLN*SVSMKGVTPQI Trigger: GATCTGTGGTGTCACACCCTTCATGGATACACTTCAGTTCAGCCACGTTTGCATAGCGTAAGCTCTTCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
||
| 3UTR TCA 72 bp | GGGTGTTGGAACTCTTTGCTGCATAGTGAAGTGCTGTaGGCTGGCTTGACTTTGCTCTTACATCTACATCGA | + |
|
Preference number: 3 (lower is better) Translates to: GCWNSLLHSEVL*AGLTLLLHLHR Trigger: TCGATGTAGATGTAAGAGCAAAGTCAAGCCAGCTCACAGCACTTCACTATGCAGCAAAGAGTTCCAACACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
||
| 3UTR TCA 72 bp | TCGTCTGTCCTTCCTTTGCTGCATAGTGAAGTGCTGTaGGCTGGCTTGACTTTGCTCTTACATCTACATCGA | + |
|
Preference number: 3 (lower is better) Translates to: SSVLPLLHSEVL*AGLTLLLHLHR Trigger: TCGATGTAGATGTAAGAGCAAAGTCAAGCCAGCTCACAGCACTTCACTATGCAGCAAAGGAAGGACAGACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| 3UTR TCA 72 bp | GTAGAGTTGATGTCGGCACCCAAGGACAACAGAGTTTaGACTGTATTCGTCTGTCCTTCCTCATGTTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VELMSAPKDNRV*TVFVCPSSCFP Trigger: TGGAAAACATGAGGAAGGACAGACGAATACAGTTCAAACTCTGTTGTCCTTGGGTGCCGACATCAACTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000133664.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGCCTCTTGCACCAGCCTaGAGAGGCGCCGCGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRLLVIRPKSMQKERQQEPLAPA*RGAADP Trigger: GGGATCCGCGGCGCCTCTGCAGGCTGGTGCAAGAGG...CTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR GCA 90 bp | GACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGGAGACGCAGTCGGCCCTCTTaGACCAGCCTGCAGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DSWSFDRRACRRKGSRRRRSRPS*TSLQRR Trigger: GCGCCTCTGCAGGCTGGTGCAAGAGGGCCGACTGCG...TCTCCTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAGACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGACGCACGCAGTCCCGGTaGCCCATAGAGGCAGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: IQTPGHSTEEHAEGKAAGRTQSR*PIEAAS Trigger: CGAAGCTGCCTCTATGGGCCACCGGGACTGCGTGCG...TCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTCTGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAAGGCAGCAGGAGGAGATGAAAACGCTGGCCGAGAAGGAACTCGATACGCGTCCGTGGCGTGCTaGACAGTGGAGAAGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: EGKAAGGDENAGREGTRYASVAC*TVEKGV Trigger: GACACCCTTCTCCACTGTGCAGCACGCCACGGACGC...GTATCGAGTTCCTTCTCGGCCAGCGTTTTCATCTCCTCCTGCTGCCTTTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR GCA 90 bp | GACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGGAGAAGCCACATGCTGACCTaGGCAGGCCAGATGCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSWSFDRRACRRKGSRRRSHMLT*AGQMQD Trigger: GTCCTGCATCTGGCCTGCGCAGGTCAGCATGTGGCT...TCTCCTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR GCA 90 bp | CCAGACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGGGTAGGAGGAGCCTGGTaGAAGCCACATGCTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: PDSWSFDRRACRRKGSRRVGGAW*KPHADL Trigger: CAGGTCAGCATGTGGCTTGCACCAGGCTCCTCCTAC...CCTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR CCA 90 bp | GGTCTTCGGAATCCTTCAGTCCCGACTGTAGGAGGAGCCTGGTGCAAGCCACATATATCCTGGCGTCCGTaGCGTGCTGCACAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLRNPSVPTVGGAWCKPHISWRP*RAAQWR Trigger: TCTCCACTGTGCAGCACGCCACGGACGCCAGGATAT...ATGTGGCTTGCACCAGGCTCCTCCTACAGTCGGGACTGAAGGATTCCGAAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAAGATCCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTGGGCCAAGGTGCCTGTaGGGTCTTCGGAATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQDPGLVMCFSGIALAECGPRCL*GLRNPS Trigger: TGAAGGATTCCGAAGACCTCACAGGCACCTTGGCCC...ACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGGATCTTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR CCA 90 bp | GATCCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTGTGAAATGGCGTGCTGCACAGTaGAGAAGGGTGTCTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPGLVMCFSGIALAECVKWRAAQ*RRVSPA Trigger: AGCCGGAGACACCCTTCTCCACTGTGCAGCACGCCA...TTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGATATCCTGGCGTCCGTaGCGTGCTGCACAGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SRLLVIRPKSMQKERQQEISWRP*RAAQWR Trigger: TCTCCACTGTGCAGCACGCCACGGACGCCAGGATAT...CTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCGAGCCTGGGCCCCCATaGTATCTGCAGCTGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLVMCFSGIALAECVKVLEPGPP*YLQLKS Trigger: GCTCTTCAGCTGCAGATAGCATGGGGGCCCAGGCTC...GAGAACTTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 |
||
| CDS-3UTR CCA 90 bp | AGCCAAGATCCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTACTGTAGGAGGAGCCTaGTGCAAGCCACATGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQDPGLVMCFSGIALAECTVGGA*CKPHAD Trigger: GTCAGCATGTGGCTTGCACCAGGCTCCTCCTACAGT...ACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGGATCTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR TCA 90 bp | GAAGGAAAGGCAGCAGGAGGAGATGAAAACGCTGGCCGAGAAGGAACTCGATACCATCAGGGCAGACAGTaGGCAAGTACCGGAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: EGKAAGGDENAGREGTRYHQGRQ*ASTGGS Trigger: TGATCCTCCGGTACTTGCTCACTGTCTGCCCTGATG...GTATCGAGTTCCTTCTCGGCCAGCGTTTTCATCTCCTCCTGCTGCCTTTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR TCA 90 bp | CCAGACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGGGGCCAGATGCAGGACTaGGCGATTTCTTTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PDSWSFDRRACRRKGSRRGQMQD*AISFIC Trigger: ACAGATGAAAGAAATCGCTCAGTCCTGCATCTGGCC...CCTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR GCA 90 bp | GTCGGCACCCAAGGACAACAGAGTTTGAACTGTATTCGTCTGTCCTTCCTCATGGAGCCTGGGCCCCCATaGTATCTGCAGCTGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGTQGQQSLNCIRLSFLMEPGPP*YLQLKS Trigger: GCTCTTCAGCTGCAGATAGCATGGGGGCCCAGGCTC...CATGAGGAAGGACAGACGAATACAGTTCAAACTCTGTTGTCCTTGGGTGCCGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128774.3 |
||
| CDS-3UTR GCA 90 bp | GGTCTTCGGAATCCTTCAGTCCCGACTGTAGGAGGAGCCTGGTGCAAGCCACATCCTCTGGAGCTTTGCTaGATAGTGAAGTGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLRNPSVPTVGGAWCKPHPLELC*IVKCCE Trigger: CTCACAGCACTTCACTATGCAGCAAAGCTCCAGAGG...ATGTGGCTTGCACCAGGCTCCTCCTACAGTCGGGACTGAAGGATTCCGAAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128774.3 |
||
| CDS-3UTR CCA 90 bp | TCTCGTGAGCTGCTGGGCCAAGGTGCCTGTGAGGTCTTCGGAATCCTTCAGTCCCTTGTTCTTCAGGAGTaGATTGGCACCGTGTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SRELLGQGACEVFGILQSLVLQE*IGTVFY Trigger: GTAGAACACGGTGCCAATCCACTCCTGAAGAACAAG...GGACTGAAGGATTCCGAAGACCTCACAGGCACCTTGGCCCAGCAGCTCACGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCAGTTTAACCCTCATTACACCTCTTGCACCAGCCTaGAGAGGCGCCGCGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGIALAECVKVLSLTLITPLAPA*RGAADP Trigger: GGGATCCGCGGCGCCTCTGCAGGCTGGTGCAAGAGG...TGTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCAGTTTAACCCTCATTACACGCAGTCGGCCCTCTTaGACCAGCCTGCAGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SGIALAECVKVLSLTLITRSRPS*TSLQRR Trigger: GCGCCTCTGCAGGCTGGTGCAAGAGGGCCGACTGCG...TGTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR GCA 90 bp | CCAGACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGGCTGTCCTTCCTTTGCTaGATAGTGAAGTGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PDSWSFDRRACRRKGSRRLSFLC*IVKCCE Trigger: CTCACAGCACTTCACTATGCAGCAAAGGAAGGACAG...CCTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR CCA 90 bp | TTGCTCTTACATCTACATCGATGCCAAGACCGCATACCAGGAACCGTATGGCTTTGGCGTGCTGCACAGTaGAGAAGGGTGTCTCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLHLHRCQDRIPGTVWLWRAAQ*RRVSPA Trigger: AGCCGGAGACACCCTTCTCCACTGTGCAGCACGCCA...AAGCCATACGGTTCCTGGTATGCGGTCTTGGCATCGATGTAGATGTAAGAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| CDS-3UTR CCA 90 bp | GACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGGAGAGGTGGCCTTCTCTACTaGCAATGTGGAAACTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSWSFDRRACRRKGSRRRGGLLY*QCGNCS Trigger: GGAACAGTTTCCACATTGCCAGTAGAGAAGGCCACC...TCTCCTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCCGGAGGATCACAGGGTaGCCTTCTCTACTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GLVMCFSGIALAECVKVLRRITG*PSLLAM Trigger: CATTGCCAGTAGAGAAGGCCACCCTGTGATCCTCCG...GAGAACTTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAAGATCCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTCTTTCAAGAAGCACCTaGACTGCTTCCAAACAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQDPGLVMCFSGIALAECLSRST*TASKQP Trigger: CGGCTGTTTGGAAGCAGTCCAGGTGCTTCTTGAAAG...ACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGGATCTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR TCA 90 bp | AGCCAAGATCCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTTGCTGTGAGCTGGCTTaGCTTTGCTCTTACATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SQDPGLVMCFSGIALAECCCELA*LCSYIY Trigger: GTAGATGTAAGAGCAAAGTCAAGCCAGCTCACAGCA...ACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGGATCTTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 |
||
| CDS-3UTR CCA 90 bp | CCACATGCTGACCTGCGCAGGCCAGATGCAGGACTGAGCGATTTCTTTCATCTGTCTTCAGGAGTGGATTaGCACCGTGTTCTACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PHADLRRPDAGLSDFFHLSSGVD*HRVLQG Trigger: ACCTTGTAGAACACGGTGCCAATCCACTCCTGAAGA...CAGATGAAAGAAATCGCTCAGTCCTGCATCTGGCCTGCGCAGGTCAGCATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAAGGCAGCAGGAGGAGATGAAAACGCTGGCCGAGAAGGAACTCGATACGGTGGCCTTCTCTACTaGCAATGTGGAAACTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGKAAGGDENAGREGTRYGGLLY*QCGNCS Trigger: GGAACAGTTTCCACATTGCCAGTAGAGAAGGCCACC...GTATCGAGTTCCTTCTCGGCCAGCGTTTTCATCTCCTCCTGCTGCCTTTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR TCA 90 bp | ATCCAGACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGATGCTGTGAGCTGGCTTaGCTTTGCTCTTACATCTAC | + |
|
Preference number: 4 (lower is better) Translates to: IQTPGHSTEEHAEGKAAGCCELA*LCSYIY Trigger: GTAGATGTAAGAGCAAAGTCAAGCCAGCTCACAGCA...TCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTCTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000128774.3 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAAGGCAGCAGGAGGAGATGAAAACGCTGGCCGAGAAGGAACTCGATACTCTTCAGGAGTGGATTaGCACCGTGTTCTACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EGKAAGGDENAGREGTRYSSGVD*HRVLQG Trigger: ACCTTGTAGAACACGGTGCCAATCCACTCCTGAAGA...GTATCGAGTTCCTTCTCGGCCAGCGTTTTCATCTCCTCCTGCTGCCTTTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAAGATCCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTAAGGACAACAGAGTTTaGACTGTATTCGTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQDPGLVMCFSGIALAECKDNRV*TVFVCP Trigger: AGGACAGACGAATACAGTTCAAACTCTGTTGTCCTT...ACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGGATCTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR GCA 90 bp | GAGAGATGTCTCAGCAGTGAAGAGCACTTCTTACCCTTACGGAGGACCAGAGTTATGGCCACACTGAATTaGATCCATGAAGGGCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERCLSSEEHFLPLRRTRVMATLN*IHEGRD Trigger: GTCACGCCCTTCATGGATGCAATTCAGTGTGGCCAT...AACTCTGGTCCTCCGTAAGGGTAAGAAGTGCTCTTCACTGCTGAGACATCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCCGTCTGTCCTTCCTTTaGTGCATAGTGAAGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVMCFSGIALAECVKVLRLSFL*CIVKCC Trigger: ACAGCACTTCACTATGCAGCAAAGGAAGGACAGACG...GAGAACTTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR CCA 90 bp | GCAAACGTGGCTGAACTGAAGTGTATCCATGAAGGGTGTGACACCACAGATCCTCTTTCAAGAAGCACCTaGACTGCTTCCAAACAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ANVAELKCIHEGCDTTDPLSRST*TASKQP Trigger: CGGCTGTTTGGAAGCAGTCCAGGTGCTTCTTGAAAG...AGGATCTGTGGTGTCACACCCTTCATGGATACACTTCAGTTCAGCCACGTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
||
| 3UTR CAA 72 bp | CTGACCTGCGCAGGCCAGATGCAGGACTCACATATATaGTTATGGCTTCAAATAGCAGTCGTCGGAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTCAGQMQDSHI*LWLQIAVVGEM Trigger: CATCTCTCCGACGACTGCTATTTGAAGCCATAACAATATATGTGAGTCCTGCATCTGGCCTGCGCAGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
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| CDS-3UTR CCA 90 bp | ACCCAAGGACAACAGAGTTTGAACTGTATTCGTCTGTCCTTCCTTTGCTGCATACGGAGGATCACAGGGTaGCCTTCTCTACTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TQGQQSLNCIRLSFLCCIRRITG*PSLLAM Trigger: CATTGCCAGTAGAGAAGGCCACCCTGTGATCCTCCG...TATGCAGCAAAGGAAGGACAGACGAATACAGTTCAAACTCTGTTGTCCTTGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
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| CDS-3UTR CCA 90 bp | TTGCTCTTACATCTACATCGATGCCAAGACCGCATACCAGGAACCGTATGGCTTTCTCTACTGGCAATGTaGAAACTGTTCCAGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLHLHRCQDRIPGTVWLSLLAM*KLFQPS Trigger: GGATGGCTGGAACAGTTTCCACATTGCCAGTAGAGA...AAGCCATACGGTTCCTGGTATGCGGTCTTGGCATCGATGTAGATGTAAGAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| CDS-3UTR TCA 90 bp | GGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCAGTTTAACCCTCATTACAGTTCATGCTATCTGCAGCTaGAGAGCAAGCCTTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIALAECVKVLSLTLITVHAICS*RASLML Trigger: CAGCATAAGGCTTGCTCTTCAGCTGCAGATAGCATG...AACTGTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR GCA 90 bp | AGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCAGTTTAACCCTCATTACAATGGCCACACTGAATTaGATCCATGAAGGGCGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGIALAECVKVLSLTLITMATLN*IHEGRD Trigger: GTCACGCCCTTCATGGATGCAATTCAGTGTGGCCAT...TGTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| 3UTR CAA 72 bp | TGTAGAGTTGATGTCGGCACCCAAGGACAACAGAGTTaGAACTGTATTCGTCTGTCCTTCCTCATGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRVDVGTQGQQS*NCIRLSFLMFS Trigger: GGAAAACATGAGGAAGGACAGACGAATACAGTTCAAACTCTGTTGTCCTTGGGTGCCGACATCAACTCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128774.3 ENSMUST00000133664.8 |
||
| 3UTR CAA 72 bp | TGTAGAGTTGATGTCGGCACCCAAGGACAACAGAGTTaGAACTGTATTCGTCTGTCCTTCCTTTGCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CRVDVGTQGQQS*NCIRLSFLCCI Trigger: TATGCAGCAAAGGAAGGACAGACGAATACAGTTCAAACTCTGTTGTCCTTGGGTGCCGACATCAACTCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCAGTTTAACCCTCATTACACTTGTTCTTCAGGAGTaGATTGGCACCGTGTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SGIALAECVKVLSLTLITLVLQE*IGTVFY Trigger: GTAGAACACGGTGCCAATCCACTCCTGAAGAACAAG...TGTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCAGTTTAACCCTCATTACATCTCTACTGGCAATGTaGAAACTGTTCCAGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SGIALAECVKVLSLTLITSLLAM*KLFQPS Trigger: GGATGGCTGGAACAGTTTCCACATTGCCAGTAGAGA...TGTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS TCA 90 bp | TCTCCGGCTGGCCCCCGGCAACCTCTAGCTACCGCCAGTTCCTCCTaGAGGTCACGCAGTCGGCCCTCTTGCACCAGCCTGCAGAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPAGPRQPLATASSS*RSRSRPSCTSLQRR Trigger: GCGCCTCTGCAGGCTGGTGCAAGAGGGCCGACTGCGTGACCTTCAGGAGGAACTGGCGGTAGCTAGAGGTTGCCGGGGGCCAGCCGGAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000130186.2 ENSMUST00000156067.8 |
||
| CDS GCA 90 bp | CATCATCAGAGGAGTCCAGTCCGCCTTCTTCAAGGAGTCCACGACTaGACCTCGGCCCAGGAGGTAGCGCACGCAGTCCCGGTGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: HHQRSPVRLLQGVHD*TSAQEVAHAVPVAH Trigger: ATGGGCCACCGGGACTGCGTGCGCTACCTCCTGGGCCGAGGTGCAGTCGTGGACTCCTTGAAGAAGGCGGACTGGACTCCTCTGATGATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS CCA 90 bp | ACTAGGTACGCTAGGATATCCTGGCGTCCGTGGCGTGCTGCACAGTaGAGAAGGGTGTCTCCGGCTGGCCCCCGGCAACCTCTAGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: TRYARISWRPWRAAQ*RRVSPAGPRQPLAT Trigger: GGTAGCTAGAGGTTGCCGGGGGCCAGCCGGAGACACCCTTCTCCACTGTGCAGCACGCCACGGACGCCAGGATATCCTAGCGTACCTAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000130186.2 ENSMUST00000156067.8 |
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| CDS CCA 90 bp | TCGATGTCCATACTCCAAGCCTCCACTAGGTACGCTAGGATATCCTaGCGTCCGTGGCGTGCTGCACAGTGGAGAAGGGTGTCTCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SMSILQASTRYARIS*RPWRAAQWRRVSPA Trigger: AGCCGGAGACACCCTTCTCCACTGTGCAGCACGCCACGGACGCCAGGATATCCTAGCGTACCTAGTGGAGGCTTGGAGTATGGACATCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000130186.2 ENSMUST00000156067.8 |
||
| CDS-3UTR CAA 90 bp | CTTACATCTACATCGATGCCAAGACCGCATACCAGGAACCGTATGGCTTCATCCACGCAGTCGGCCCTCTaGCACCAGCCTGCAGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LTSTSMPRPHTRNRMASSTQSAL*HQPAEA Trigger: CGCCTCTGCAGGCTGGTGCAAGAGGGCCGACTGCGT...GGATGAAGCCATACGGTTCCTGGTATGCGGTCTTGGCATCGATGTAGATGTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTGCTGGGCCAAGGTGCCTGTGAGGTCTTCGGAATCCTTCAGTCCCGACCATCAAGGTTCTTCCTaGTGCACGCCATCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VSCWAKVPVRSSESFSPDHQGSS*CTPSSE Trigger: CTCTGATGATGGCGTGCACAAGGAAGAACCTTGATG...GTCGGGACTGAAGGATTCCGAAGACCTCACAGGCACCTTGGCCCAGCAGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| CDS-3UTR CAA 90 bp | CCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTGGCGTGACACCACAGTaGTCTCGACAGTCTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGLVMCFSGIALAECVKVGVTPQ*SRQSGS Trigger: TGAACCAGACTGTCGAGACAACTGTGGTGTCACGCC...AACTTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR CAA 90 bp | AGTGGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCAGTTTAACCCTCATTACAACGCAGTCGGCCCTCTaGCACCAGCCTGCAGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SGIALAECVKVLSLTLITTQSAL*HQPAEA Trigger: CGCCTCTGCAGGCTGGTGCAAGAGGGCCGACTGCGT...TGTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR CAA 90 bp | GACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGGAGATTCTTCAGGAGTGGATaGGCACCGTGTTCTACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSWSFDRRACRRKGSRRRFFRSG*APCSTR Trigger: CCTTGTAGAACACGGTGCCAATCCACTCCTGAAGAA...TCTCCTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGCTGTTCCAGCCATCCTaGTTCTTCAGGAGTGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: SRLLVIRPKSMQKERQQELFQPS*FFRSGL Trigger: CAATCCACTCCTGAAGAACAAGGATGGCTGGAACAG...CTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGACTCCTGGTCATTCGACCGAAGAGCATGCAGAAGGAAAGGCAGCAGGAGAGATCCTCTGGAGCTTaGCTGCATAGTGAAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRLLVIRPKSMQKERQQERSSGA*LHSEVL Trigger: CAGCACTTCACTATGCAGCAAAGCTCCAGAGGATCT...CTCCTGCTGCCTTTCCTTCTGCATGCTCTTCGGTCGAATGACCAGGAGTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128774.3 |
||
| CDS GCA 90 bp | CACCGTGTTCTACAAGGTCCTGGATCACATCAAGGTTCTTCCTTGTaGACGCCATCATCAGAGGAGTCCAGTCCGCCTTCTTCAAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HRVLQGPGSHQGSSL*TPSSEESSPPSSRS Trigger: ACTCCTTGAAGAAGGCGGACTGGACTCCTCTGATGATGGCGTGCACAAGGAAGAACCTTGATGTGATCCAGGACCTTGTAGAACACGGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAGTGTATCCATGAAGGGTGTGACACCACAGATCCTCTGGAGCTGGAGTTAGGCGTGACACCACAGTaGTCTCGACAGTCTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKCIHEGCDTTDPLELELGVTPQ*SRQSGS Trigger: TGAACCAGACTGTCGAGACAACTGTGGTGTCACGCC...TAACTCCAGCTCCAGAGGATCTGTGGTGTCACACCCTTCATGGATACACTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133664.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGAAAGGCAGCAGGAGGAGATGAAAACGCTGGCCGAGAAGGAACTCGATACTCGTCTGTCCTTCCTTaGCTGCATAGTGAAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGKAAGGDENAGREGTRYSSVLP*LHSEVL Trigger: CAGCACTTCACTATGCAGCAAAGGAAGGACAGACGA...GTATCGAGTTCCTTCTCGGCCAGCGTTTTCATCTCCTCCTGCTGCCTTTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS-3UTR CAA 90 bp | GAAGGAAAGGCAGCAGGAGGAGATGAAAACGCTGGCCGAGAAGGAACTCGATACCTTTCATCTGTAGAGTaGATGTCGGCACCCAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EGKAAGGDENAGREGTRYLSSVE*MSAPKD Trigger: GTCCTTGGGTGCCGACATCAACTCTACAGATGAAAG...GTATCGAGTTCCTTCTCGGCCAGCGTTTTCATCTCCTCCTGCTGCCTTTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS TCA 90 bp | GATCCTCTGGAGCTTTGCTGCATAGTGAAGTGCTGTGAGCTGGCTTaGCTTTGCTCTTACATCTACATCGATGCCAAGACCGCATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: DPLELCCIVKCCELA*LCSYIYIDAKTAYQ Trigger: CTGGTATGCGGTCTTGGCATCGATGTAGATGTAAGAGCAAAGTCAAGCCAGCTCACAGCACTTCACTATGCAGCAAAGCTCCAGAGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128774.3 |
||
| CDS CCA 90 bp | TCCTTGTTCTTCAGGAGTGGATTGGCACCGTGTTCTACAAGGTCCTaGATCACATCAAGGTTCTTCCTTGTGCACGCCATCATCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLFFRSGLAPCSTRS*ITSRFFLVHAIIRG Trigger: TCCTCTGATGATGGCGTGCACAAGGAAGAACCTTGATGTGATCCAGGACCTTGTAGAACACGGTGCCAATCCACTCCTGAAGAACAAGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR CAA 90 bp | GATCCGGGGCTGGTGATGTGCTTCAGTGGCATAGCACTTGCTGAGTGTGTGAAAGGGGTTCTTCTAATGTaGCTCTCTGTTTTCCAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DPGLVMCFSGIALAECVKGVLLM*LSVFQA Trigger: TGCTTGGAAAACAGAGAGCAACATTAGAAGAACCCC...TTTCACACACTCAGCAAGTGCTATGCCACTGAAGCACATCACCAGCCCCGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS CCA 90 bp | AATTGCATCCATGAAGGGCGTGACACCACAGTTGTCTCGACAGTCTaGTTCATAGTGACACCTTTCAAGAAGCACCTGGACTGCTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NCIHEGRDTTVVSTV*FIVTPFKKHLDCFQ Trigger: TTGGAAGCAGTCCAGGTGCTTCTTGAAAGGTGTCACTATGAACCAGACTGTCGAGACAACTGTGGTGTCACGCCCTTCATGGATGCAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000133664.8 |
||
| CDS-3UTR CAA 90 bp | GGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCAGTTTAACCCTCATTACAGTTCATCAAGGTTCTTCCTaGTGCACGCCATCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GIALAECVKVLSLTLITVHQGSS*CTPSSE Trigger: CTCTGATGATGGCGTGCACAAGGAAGAACCTTGATG...AACTGTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS-3UTR CAA 90 bp | GGCATAGCACTTGCTGAGTGTGTGAAAGTTCTCAGTTTAACCCTCATTACAGTTCTGTTCCAGCCATCCTaGTTCTTCAGGAGTGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: GIALAECVKVLSLTLITVLFQPS*FFRSGL Trigger: CAATCCACTCCTGAAGAACAAGGATGGCTGGAACAG...AACTGTAATGAGGGTTAAACTGAGAACTTTCACACACTCAGCAAGTGCTATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS TCA 72 bp | GGCCCCCGGCAACCTCTAGCTACCGCCAGTTCCTCCTaGAGGTCACGCAGTCGGCCCTCTTGCACCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GPRQPLATASSS*RSRSRPSCTSL Trigger: CAGGCTGGTGCAAGAGGGCCGACTGCGTGACCTTCAGGAGGAACTGGCGGTAGCTAGAGGTTGCCGGGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000130186.2 ENSMUST00000156067.8 |
||
| CDS CCA 72 bp | GTGGCGTGCTGCACAGTGGAGAAGGGTGTCTCCGGCTaGCCCCCGGCAACCTCTAGCTACCGCCAGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VACCTVEKGVSG*PPATSSYRQFL Trigger: GAGGAACTGGCGGTAGCTAGAGGTTGCCGGGGGCCAGCCGGAGACACCCTTCTCCACTGTGCAGCACGCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000130186.2 ENSMUST00000156067.8 |
||
| CDS CCA 72 bp | GCTAGGATATCCTGGCGTCCGTGGCGTGCTGCACAGTaGAGAAGGGTGTCTCCGGCTGGCCCCCGGCAACCT | + |
|
Preference number: 6 (lower is better) Translates to: ARISWRPWRAAQ*RRVSPAGPRQP Trigger: AGGTTGCCGGGGGCCAGCCGGAGACACCCTTCTCCACTGTGCAGCACGCCACGGACGCCAGGATATCCTAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000130186.2 ENSMUST00000156067.8 |
||
| CDS GCA 72 bp | AGGAGTCCAGTCCGCCTTCTTCAAGGAGTCCACGACTaGACCTCGGCCCAGGAGGTAGCGCACGCAGTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSPVRLLQGVHD*TSAQEVAHAVP Trigger: CGGGACTGCGTGCGCTACCTCCTGGGCCGAGGTGCAGTCGTGGACTCCTTGAAGAAGGCGGACTGGACTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS CCA 72 bp | GCCTCCACTAGGTACGCTAGGATATCCTGGCGTCCGTaGCGTGCTGCACAGTGGAGAAGGGTGTCTCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASTRYARISWRP*RAAQWRRVSPA Trigger: AGCCGGAGACACCCTTCTCCACTGTGCAGCACGCCACGGACGCCAGGATATCCTAGCGTACCTAGTGGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056108.12 ENSMUST00000130186.2 ENSMUST00000156067.8 |
||
| CDS CAA 90 bp | TGGCACCGTGTTCTACAAGGTCCTGGATCACATCAAGGTTCTTCCTaGTGCACGCCATCATCAGAGGAGTCCAGTCCGCCTTCTTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WHRVLQGPGSHQGSS*CTPSSEESSPPSSR Trigger: CCTTGAAGAAGGCGGACTGGACTCCTCTGATGATGGCGTGCACAAGGAAGAACCTTGATGTGATCCAGGACCTTGTAGAACACGGTGCCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS CCA 72 bp | GCAAGTACCGGAGGATCACAGGGTGGCCTTCTCTACTaGCAATGTGGAAACTGTTCCAGCCATCCTTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASTGGSQGGLLY*QCGNCSSHPCS Trigger: AGAACAAGGATGGCTGGAACAGTTTCCACATTGCCAGTAGAGAAGGCCACCCTGTGATCCTCCGGTACTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS CCA 72 bp | GTGCATTGCGGAGGATCACAGGGTGGCCTTCTCTACTaGCAATGTGGAAACTGTTCCAGCCATCCTTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VHCGGSQGGLLY*QCGNCSSHPCS Trigger: AGAACAAGGATGGCTGGAACAGTTTCCACATTGCCAGTAGAGAAGGCCACCCTGTGATCCTCCGCAATGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156067.8 |
||
| CDS CAA 72 bp | GTTCTACAAGGTCCTGGATCACATCAAGGTTCTTCCTaGTGCACGCCATCATCAGAGGAGTCCAGTCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: VLQGPGSHQGSS*CTPSSEESSPP Trigger: AGGCGGACTGGACTCCTCTGATGATGGCGTGCACAAGGAAGAACCTTGATGTGATCCAGGACCTTGTAGAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS CCA 72 bp | TTCAGGAGTGGATTGGCACCGTGTTCTACAAGGTCCTaGATCACATCAAGGTTCTTCCTTGTGCACGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: FRSGLAPCSTRS*ITSRFFLVHAI Trigger: GATGGCGTGCACAAGGAAGAACCTTGATGTGATCCAGGACCTTGTAGAACACGGTGCCAATCCACTCCTGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000156067.8 |
||
| CDS CCA 72 bp | CATGAAGGGCGTGACACCACAGTTGTCTCGACAGTCTaGTTCATAGTGACACCTTTCAAGAAGCACCTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: HEGRDTTVVSTV*FIVTPFKKHLD Trigger: GTCCAGGTGCTTCTTGAAAGGTGTCACTATGAACCAGACTGTCGAGACAACTGTGGTGTCACGCCCTTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056108.12 ENSMUST00000133664.8 |
||
| CDS CAA 90 bp | AAACAGCCGTGCATTGCTGCAGTGTGTAAAGGGGTTCTTCTAATGTaGCTCTCTGTTTTCCAAGCATCAGGGCAGACAGTGAGCAAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KQPCIAAVCKGVLLM*LSVFQASGQTVSKY Trigger: GTACTTGCTCACTGTCTGCCCTGATGCTTGGAAAACAGAGAGCAACATTAGAAGAACCCCTTTACACACTGCAGCAATGCACGGCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
||
| CDS TCA 72 bp | AGATCCTCTGGAGCTTTGCTGCATAGTGAAGTGCTGTaGGCTGGCTTGACTTTGCTCTTACATCTACATCGA | + |
|
Preference number: 6 (lower is better) Translates to: RSSGALLHSEVL*AGLTLLLHLHR Trigger: TCGATGTAGATGTAAGAGCAAAGTCAAGCCAGCTCACAGCACTTCACTATGCAGCAAAGCTCCAGAGGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128774.3 |
||
| CDS CAA 72 bp | TGCATTGCTGCAGTGTGTAAAGGGGTTCTTCTAATGTaGCTCTCTGTTTTCCAAGCATCAGGGCAGACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: CIAAVCKGVLLM*LSVFQASGQTV Trigger: CACTGTCTGCCCTGATGCTTGGAAAACAGAGAGCAACATTAGAAGAACCCCTTTACACACTGCAGCAATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056108.12 |
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