Pregenerated sensors for ANKRD13D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005986Ensembl transcript IDs: ENSMUST00000056888.13, ENSMUST00000163858.8, ENSMUST00000166031.2, ENSMUST00000167215.2, ENSMUST00000170283.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCAAACTGCAGCAGGTCGTCATCCTCATCCCGAAGGGGCTCGCTaGGCTCAGCACCCAGCACACTGTATCCCTCGGGCACCTCGAATA | + |
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Preference number: 1 (lower is better) Translates to: WQTAAGRHPHPEGAR*AQHPAHCIPRAPRI Trigger: TATTCGAGGTGCCCGAGGGATACAGTGTGCTGGGTGCTGAGCGCAGCGAGCCCCTTCGGGATGAGGATGACGACCTGCTGCAGTTTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR GCA 90 bp | AGAAGGCATGGCCCTGGGGAGCCGTCCCAAGGCCAGGCAACTCAGTaGTCTGTGAGTGACAGCTGCAGGATCCGCTGTAAGTCGTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: RRHGPGEPSQGQATQ*SVSDSCRIRCKSSS Trigger: AGAAGACGACTTACAGCGGATCCTGCAGCTGTCACTCACAGAGCACTGAGTTGCCTGGCCTTGGGACGGCTCCCCAGGGCCATGCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR TCA 90 bp | TTTCCTGCAGGGCCTGCTCCAACTGAAGCTGCTCTTCAAACACTGTaGCTCGGGGAGGAGGGTGAATGCCAGGCCGTGTGTTGGTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: FPAGPAPTEAALQTL*LGEEGECQAVCWSG Trigger: CCCTGACCAACACACGGCCTGGCATTCACCCTCCTCCCCGAGTCACAGTGTTTGAAGAGCAGCTTCAGTTGGAGCAGGCCCTGCAGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000166031.2 |
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| 3UTR CCA 90 bp | GGGATGGAGGTGTCTTCTGAGGAGATTCTGGACCCCTGGACTCTGTaGACAGCTGTAGGCTTTCCTGCAGGGCCTGCTCCAACTGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: GMEVSSEEILDPWTL*TAVGFPAGPAPTEA Trigger: AGCTTCAGTTGGAGCAGGCCCTGCAGGAAAGCCTACAGCTGTCCACAGAGTCCAGGGGTCCAGAATCTCCTCAGAAGACACCTCCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000166031.2 |
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| 3UTR CCA 90 bp | GCTCAGCACCCAGCACACTGTATCCCTCGGGCACCTCGAATACAGTaGGGTCCACCTCACATGGAAAAGGGCTTCCTGAAGCAGAAATGG | + |
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Preference number: 1 (lower is better) Translates to: AQHPAHCIPRAPRIQ*GPPHMEKGFLKQKW Trigger: CCATTTCTGCTTCAGGAAGCCCTTTTCCATGTGAGGTGGACCCCACTGTATTCGAGGTGCCCGAGGGATACAGTGTGCTGGGTGCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR CCA 90 bp | CACATGGAAAAGGGCTTCCTGAAGCAGAAATGGCAGAACTGGAGTTaGGGACGCACACCGAGCTCACAGGCTCATCACAGCCGCAAAGGT | + |
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Preference number: 1 (lower is better) Translates to: HMEKGFLKQKWQNWS*GRTPSSQAHHSRKG Trigger: ACCTTTGCGGCTGTGATGAGCCTGTGAGCTCGGTGTGCGTCCCCAACTCCAGTTCTGCCATTTCTGCTTCAGGAAGCCCTTTTCCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR CCA 90 bp | TTCCACGTAGAAATCAGGGGCCTGACGGAGTTTGTTGAGCAGTTCTaGAATGCCAGCCAACCTCTGTGTGGCCCTCTGGAAGTCCCGATA | + |
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Preference number: 1 (lower is better) Translates to: FHVEIRGLTEFVEQF*NASQPLCGPLEVPI Trigger: TATCGGGACTTCCAGAGGGCCACACAGAGGTTGGCTGGCATTCCAGAACTGCTCAACAAACTCCGTCAGGCCCCTGATTTCTACGTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR CCA 90 bp | ATACCACATTTGTTCCTCTCAAAGGCTACATTGCGAGTGTCCAGGTaGGTGGAGACAATAGGAGAGGTGAGCCGACTGGCCACGTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: IPHLFLSKATLRVSR*VETIGEVSRLATCS Trigger: GGAGCACGTGGCCAGTCGGCTCACCTCTCCTATTGTCTCCACCCACCTGGACACTCGCAATGTAGCCTTTGAGAGGAACAAATGTGGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCCAGGCGAAGCTGCTCCTCAAAGCTTGGGGGTGCAGGGGATGGAGGTGTTGGGAGGAGTGCTGCTaGGCCATGCCCAGGAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: QGQAKLLLKAWGCRGWRCWEECC*AMPRKD Trigger: GTCCTTCCTGGGCATGGCCCAGCAGCACTCCTCCCA...ACACCTCCATCCCCTGCACCCCCAAGCTTTGAGGAGCAGCTTCGCCTGGCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR GCA 90 bp | GAGACTAGTGTCCACCCGCAGACTCTCACCCCGCTTCCACACACGGTACACATCGGGCTGGCTGCCTGCTaGACGGGAGCCAAAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ETSVHPQTLTPLPHTVHIGLAAC*TGAKVW Trigger: CCACACTTTGGCTCCCGTGCAGCAGGCAGCCAGCCC...GATGTGTACCGTGTGTGGAAGCGGGGTGAGAGTCTGCGGGTGGACACTAGTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAACTCCTCCTGTTCCCTTGAAGACAACTCCAGGGCCAGGCGAAGCTGCTCCGTTGGTGGGGCTGGCTaGCTGCTGCACGGGAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: SNSSCSLEDNSRARRSCSVGGAG*LLHGSQ Trigger: TTGGCTCCCGTGCAGCAGGCAGCCAGCCCCACCAAC...GGAGCAGCTTCGCCTGGCCCTGGAGTTGTCTTCAAGGGAACAGGAGGAGTTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCAAAGCTTGGGGGTGCAGGGGATGGAGGTGTCTTCTGAGGAGATTCTGGACCAGGCAGAAGGCATaGCCCTGGGGAGCCGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: LLKAWGCRGWRCLLRRFWTRQKA*PWGAVP Trigger: TGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGT...CCAGAATCTCCTCAGAAGACACCTCCATCCCCTGCACCCCCAAGCTTTGAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR GCA 90 bp | CATCCCGAAGGGGCTCGCTGCGCTCAGCACCCAGCACACTGTATCCCTCGGGCAGGCACTGTACACCTTTaGCTCGTAGCCACTAACAGA | + |
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Preference number: 2 (lower is better) Translates to: HPEGARCAQHPAHCIPRAGTVHL*LVATNR Trigger: TCTGTTAGTGGCTACGAGGCAAAGGTGTACAGTGCC...TGCCCGAGGGATACAGTGTGCTGGGTGCTGAGCGCAGCGAGCCCCTTCGGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAACTCCTCCTGTTCCCTTGAAGACAACTCCAGGGCCAGGCGAAGCTGCTCCGGGGAGGAGGGTGAATaGCAGGCCGTGTGTTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: SNSSCSLEDNSRARRSCSGEEGE*QAVCWS Trigger: TGACCAACACACGGCCTGGCATTCACCCTCCTCCCC...GGAGCAGCTTCGCCTGGCCCTGGAGTTGTCTTCAAGGGAACAGGAGGAGTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000166031.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGAACCAGGCAGAAGGCATaGCCCTGGGGAGCCGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: SVSLLAYLQCPGPKLSSRTRQKA*PWGAVP Trigger: TGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGT...TCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGAACTGGAGTTGGGGACGCACACCGAGCTCACAGGCTCATCACAGCCGCACCAGCTCCACATTGGTaGCACTGTACACCTTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: GRTGVGDAHRAHRLITAAPAPHW*HCTPLP Trigger: AGGCAAAGGTGTACAGTGCCACCAATGTGGAGCTGG...TGCGGCTGTGATGAGCCTGTGAGCTCGGTGTGCGTCCCCAACTCCAGTTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR TCA 90 bp | GGATCCGCTGTAAGTCGTCTTCTTCCTGCTGACCCCGTCGCTCCAACTCCTCCTAGGGCCTGCTCCAACTaGAGCTGCTCTTCAAACACT | + |
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Preference number: 2 (lower is better) Translates to: GSAVSRLLPADPVAPTPPRACSN*SCSSNT Trigger: AGTGTTTGAAGAGCAGCTTCAGTTGGAGCAGGCCCT...AGGAGGAGTTGGAGCGACGGGGTCAGCAGGAAGAAGACGACTTACAGCGGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR CAA 90 bp | TCACATGGAAAAGGGCTTCCTGAAGCAGAAATGGCAGAACTGGAGTaGGGGACGCACACCGAGCTCACAGGCTCATCACAGCCGCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SHGKGLPEAEMAELE*GTHTELTGSSQPQR Trigger: CCTTTGCGGCTGTGATGAGCCTGTGAGCTCGGTGTGCGTCCCCAACTCCAGTTCTGCCATTTCTGCTTCAGGAAGCCCTTTTCCATGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCCAGGCGAAGCTGCTCCTCAAAGCTTGGGGGTGCAGGGGATGGAGGTGTTTCCTTAACTTGTCCTaGTCAGAGAGGTGTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: QGQAKLLLKAWGCRGWRCFLNLS*SERCSV Trigger: AACAGAACACCTCTCTGACCAGGACAAGTTAAGGAA...ACACCTCCATCCCCTGCACCCCCAAGCTTTGAGGAGCAGCTTCGCCTGGCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR TCA 90 bp | AACAGACTCCATCTTCTCAGACCGCCATCCCCAGATACCACATTTGTTCCTCTCAAGGCTCCCGCCTCCTaGCCCCTGAAGATGAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: NRLHLLRPPSPDTTFVPLKAPAS*PLKMKL Trigger: GAGCTTCATCTTCAGGGGTCAGGAGGCGGGAGCCTT...GAGAGGAACAAATGTGGTATCTGGGGATGGCGGTCTGAGAAGATGGAGTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR TCA 90 bp | GGATCCGCTGTAAGTCGTCTTCTTCCTGCTGACCCCGTCGCTCCAACTCCTCCTTTCTGGATTCCAGGCTaGAGCTGGGGTCAAAGTATT | + |
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Preference number: 2 (lower is better) Translates to: GSAVSRLLPADPVAPTPPFWIPG*SWGQSI Trigger: AATACTTTGACCCCAGCTTCAGCCTGGAATCCAGAA...AGGAGGAGTTGGAGCGACGGGGTCAGCAGGAAGAAGACGACTTACAGCGGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR TCA 90 bp | ACACTGTATCCCTCGGGCACCTCGAATACAGTGGGGTCCACCTCACATGGAAAAGGGGAATCTCAATCTTaGCAGGGAAGCCTGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TLYPSGTSNTVGSTSHGKGESQS*QGSLVG Trigger: TCCCACCAGGCTTCCCTGTCAAGATTGAGATTCCCC...TTTTCCATGTGAGGTGGACCCCACTGTATTCGAGGTGCCCGAGGGATACAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR CCA 90 bp | GGATCCGCTGTAAGTCGTCTTCTTCCTGCTGACCCCGTCGCTCCAACTCCTCCTTGGAAGTCCCGATACTaGAGTACCAACTGTACCATC | + |
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Preference number: 2 (lower is better) Translates to: GSAVSRLLPADPVAPTPPWKSRY*STNCTI Trigger: GATGGTACAGTTGGTACTCCAGTATCGGGACTTCCA...AGGAGGAGTTGGAGCGACGGGGTCAGCAGGAAGAAGACGACTTACAGCGGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR CAA 90 bp | CCCCTTTGTTCCTTAACTTGTCCTGGTCAGAGAGGTGTTCTGTTCTaGTGCGTGTCACCAGCTCCACATTGGTGGCACTGTACACCTTTG | + |
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Preference number: 2 (lower is better) Translates to: PLCSLTCPGQRGVLF*CVSPAPHWWHCTPL Trigger: CAAAGGTGTACAGTGCCACCAATGTGGAGCTGGTGACACGCACAAGAACAGAACACCTCTCTGACCAGGACAAGTTAAGGAACAAAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTTCCTTAACTTGTCCTGGTCAGAGAGGTGTTCTGTTCTTGTGCGTGTCACCCTAGCCTATCTTCAGTaGCCAGGTCCCAAGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LFLNLSWSERCSVLVRVTLAYLQ*PGPKLS Trigger: GCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAG...GGTGACACGCACAAGAACAGAACACCTCTCTGACCAGGACAAGTTAAGGAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCTGGGGTCAAAGTATTCCTCAGCAGAGATAGCTGTAGGGTTGGTGGGGCTTTCCTTAACTTGTCCTaGTCAGAGAGGTGTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: EAGVKVFLSRDSCRVGGAFLNLS*SERCSV Trigger: AACAGAACACCTCTCTGACCAGGACAAGTTAAGGAA...AGCCCCACCAACCCTACAGCTATCTCTGCTGAGGAATACTTTGACCCCAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000170283.2 |
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| 3UTR GCA 72 bp | GCCTGCTGCACGGGAGCCAAAGTGTGGGAGGAGTGCTaGTGGGCCATGCCCAGGAAGGACTGGAATGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: ACCTGAKVWEEC*WAMPRKDWNGV Trigger: GACTCCATTCCAGTCCTTCCTGGGCATGGCCCAGCAGCACTCCTCCCACACTTTGGCTCCCGTGCAGCAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000170283.2 |
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| 3UTR GCA 72 bp | GGCCCTGGGGAGCCGTCCCAAGGCCAGGCAACTCAGTaGTCTGTGAGTGACAGCTGCAGGATCCGCTGTAAG | + |
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Preference number: 3 (lower is better) Translates to: GPGEPSQGQATQ*SVSDSCRIRCK Trigger: CTTACAGCGGATCCTGCAGCTGTCACTCACAGAGCACTGAGTTGCCTGGCCTTGGGACGGCTCCCCAGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGACCCCTGGACTCTGTGGACAGCTGTAGGCTTTCCTGCAGGGCCTGCTCCAGAGATAGCTGTAGGGTaGGTGGGGCTGGCTGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: LDPWTLWTAVGFPAGPAPEIAVG*VGLAAC Trigger: GCAGGCAGCCAGCCCCACCAACCCTACAGCTATCTC...TGGAGCAGGCCCTGCAGGAAAGCCTACAGCTGTCCACAGAGTCCAGGGGTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR GCA 72 bp | CTCAGCAGAGATAGCTGTAGGGTTGGTGGGGCTGGCTaGCTGCTGCACGGGAGCCAAAGTGTGGGAGGAGTG | + |
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Preference number: 3 (lower is better) Translates to: LSRDSCRVGGAG*LLHGSQSVGGV Trigger: CACTCCTCCCACACTTTGGCTCCCGTGCAGCAGGCAGCCAGCCCCACCAACCCTACAGCTATCTCTGCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000170283.2 |
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| 3UTR GCA 72 bp | CTAGGCCGCATGGCAGCCAGCAGCGCTTCTGGTTCATaGAGAGCTGGAGCTAGGGTCTCTGTGTGCACCACC | + |
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Preference number: 3 (lower is better) Translates to: LGRMAASSASGS*RAGARVSVCTT Trigger: GGTGGTGCACACAGAGACCCTAGCTCCAGCTCTGCATGAACCAGAAGCGCTGCTGGCTGCCATGCGGCCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR CAA 90 bp | AAACACTGTGACTCGGGGAGGAGGGTGAATGCCAGGCCGTGTGTTGGTCAGGGCCTCTCAAAGGCTACATaGCGAGTGTCCAGGTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: KHCDSGRRVNARPCVGQGLSKAT*RVSRWV Trigger: CACCCACCTGGACACTCGCAATGTAGCCTTTGAGAG...GCCCTGACCAACACACGGCCTGGCATTCACCCTCCTCCCCGAGTCACAGTGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR CAA 90 bp | GCACCCAGCACACTGTATCCCTCGGGCACCTCGAATACAGTGGGGTCCACCTCAGTCACCAGCTCCACATaGGTGGCACTGTACACCTTT | + |
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Preference number: 3 (lower is better) Translates to: APSTLYPSGTSNTVGSTSVTSST*VALYTF Trigger: AAAGGTGTACAGTGCCACCAATGTGGAGCTGGTGAC...TGAGGTGGACCCCACTGTATTCGAGGTGCCCGAGGGATACAGTGTGCTGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR CCA 72 bp | GGGATGGAGGTGTCTTCTGAGGAGATTCTGGACCCCTaGACTCTGTGGACAGCTGTAGGCTTTCCTGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: GMEVSSEEILDP*TLWTAVGFPAG Trigger: CCCTGCAGGAAAGCCTACAGCTGTCCACAGAGTCCAGGGGTCCAGAATCTCCTCAGAAGACACCTCCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000166031.2 |
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| 3UTR TCA 72 bp | AGCTGCAGGATCCGCTGTAAGTCGTCTTCTTCCTGCTaGCCCCGTCGCTCCAACTCCTCCTGTTCCCTTGAA | + |
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Preference number: 3 (lower is better) Translates to: SCRIRCKSSSSC*PRRSNSSCSLE Trigger: TTCAAGGGAACAGGAGGAGTTGGAGCGACGGGGTCAGCAGGAAGAAGACGACTTACAGCGGATCCTGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR CCA 72 bp | CCAGCACACTGTATCCCTCGGGCACCTCGAATACAGTaGGGTCCACCTCACATGGAAAAGGGCTTCCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: PAHCIPRAPRIQ*GPPHMEKGFLK Trigger: CTTCAGGAAGCCCTTTTCCATGTGAGGTGGACCCCACTGTATTCGAGGTGCCCGAGGGATACAGTGTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGACCCCGTCGCTCCAACTCCTCCTGTTCCCTTGAAGACAACTCCAGGGCCACCTTTGTTCCTTAACTaGTCCTGGTCAGAGAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: ADPVAPTPPVPLKTTPGPPLFLN*SWSERC Trigger: ACACCTCTCTGACCAGGACAAGTTAAGGAACAAAGG...TGGCCCTGGAGTTGTCTTCAAGGGAACAGGAGGAGTTGGAGCGACGGGGTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR CCA 72 bp | TTGTTCCTCTCAAAGGCTACATTGCGAGTGTCCAGGTaGGTGGAGACAATAGGAGAGGTGAGCCGACTGGCC | + |
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Preference number: 3 (lower is better) Translates to: LFLSKATLRVSR*VETIGEVSRLA Trigger: GGCCAGTCGGCTCACCTCTCCTATTGTCTCCACCCACCTGGACACTCGCAATGTAGCCTTTGAGAGGAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR CCA 72 bp | CCACCTCACATGGAAAAGGGCTTCCTGAAGCAGAAATaGCAGAACTGGAGTTGGGGACGCACACCGAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: PPHMEKGFLKQK*QNWSWGRTPSS Trigger: TGAGCTCGGTGTGCGTCCCCAACTCCAGTTCTGCCATTTCTGCTTCAGGAAGCCCTTTTCCATGTGAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR CCA 72 bp | AGTTCTGGAATGCCAGCCAACCTCTGTGTGGCCCTCTaGAAGTCCCGATACTGGAGTACCAACTGTACCATC | + |
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Preference number: 3 (lower is better) Translates to: SSGMPANLCVAL*KSRYWSTNCTI Trigger: GATGGTACAGTTGGTACTCCAGTATCGGGACTTCCAGAGGGCCACACAGAGGTTGGCTGGCATTCCAGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR TCA 72 bp | TTTCCACGTAGAAATCAGGGGCCTGACGGAGTTTGTTaGGCAGTTCTGGAATGCCAGCCAACCTCTGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: FPRRNQGPDGVC*AVLECQPTSVW Trigger: CCACACAGAGGTTGGCTGGCATTCCAGAACTGCTCAACAAACTCCGTCAGGCCCCTGATTTCTACGTGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR-3UTR CAA 90 bp | GAAGCTGGGGTCAAAGTATTCCTCAGCAGAGATAGCTGTAGGGTTGGTGGGGCTCCTTTGTTCCTTAACTaGTCCTGGTCAGAGAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: EAGVKVFLSRDSCRVGGAPLFLN*SWSERC Trigger: ACACCTCTCTGACCAGGACAAGTTAAGGAACAAAGG...AGCCCCACCAACCCTACAGCTATCTCTGCTGAGGAATACTTTGACCCCAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000170283.2 |
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| 3UTR GCA 72 bp | ATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTaGCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATA | + |
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Preference number: 3 (lower is better) Translates to: ISTSVSLLAYLQ*PGPKLSSRQFI Trigger: TATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 |
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| CDS-3UTR GCA 90 bp | CCACCTGCCGGTCATGATCCACTTCCATCACCAAGGCTCCCGCCTCCTGACCCCGTGCTGACTGCCTCCTaGAGGACTGCCCAGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PPAGHDPLPSPRLPPPDPVLTAS*RTAQPW Trigger: CCAGGGCTGGGCAGTCCTGCAGGAGGCAGTCAGCAC...GGGGTCAGGAGGCGGGAGCCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
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| CDS-3UTR GCA 90 bp | CTGGACCCCTGGACTCTGTGGACAGCTGTAGGCTTTCCTGCAGGGCCTGCTCCACCCGAAGGGGCTCGCTaGGCTCAGCACCCAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: LDPWTLWTAVGFPAGPAPPEGAR*AQHPAH Trigger: GTGTGCTGGGTGCTGAGCGCAGCGAGCCCCTTCGGG...TGGAGCAGGCCCTGCAGGAAAGCCTACAGCTGTCCACAGAGTCCAGGGGTCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166031.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCCAGGCGAAGCTGCTCCTCAAAGCTTGGGGGTGCAGGGGATGGAGGTGTCCTGCCCAGCCCTGGTaGCTCTCTTTGCCCACGTTG | + |
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Preference number: 4 (lower is better) Translates to: QGQAKLLLKAWGCRGWRCPAQPW*LSLPTL Trigger: CAACGTGGGCAAAGAGAGCCACCAGGGCTGGGCAGG...ACACCTCCATCCCCTGCACCCCCAAGCTTTGAGGAGCAGCTTCGCCTGGCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| CDS-3UTR TCA 90 bp | CACCACCTGCCGGTCATGATCCACTTCCATCACCAAGGCTCCCGCCTCCTGACCCAGGGTCTCCAGTGCTaGCTGCCTCCTGCAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HHLPVMIHFHHQGSRLLTQGLQC*LPPAGL Trigger: CAGTCCTGCAGGAGGCAGTCAGCACTGGAGACCCTG...GGTCAGGAGGCGGGAGCCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGCTAGGGTCTCTGTGTGCACCACCTGCCGGTCATGATCCACTTCCATCAGCCCAGACTAGCCGGTaGAGCGGGAAGGTGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LELGSLCAPPAGHDPLPSAQTSR*SGKVGP Trigger: GGGCCCCACCTTCCCGCTGCACCGGCTAGTCTGGGC...TGATGGAAGTGGATCATGACCGGCAGGTGGTGCACACAGAGACCCTAGCTCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000167215.2 |
||
| CDS-3UTR GCA 90 bp | CACCACCTGCCGGTCATGATCCACTTCCATCACCAAGGCTCCCGCCTCCTGACCTCGTGCTTGCGGCTGTaGAGTGCGGCCTCCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HHLPVMIHFHHQGSRLLTSCLRL*SAASSS Trigger: CGAACTGGAGGCCGCACTGCACAGCCGCAAGCACGA...GGTCAGGAGGCGGGAGCCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000167215.2 |
||
| CDS-3UTR CCA 90 bp | CACCACCTGCCGGTCATGATCCACTTCCATCACCAAGGCTCCCGCCTCCTGACCAGGACTGCCCAGCCCTaGTGGCTCTCTTTGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HHLPVMIHFHHQGSRLLTRTAQP*WLSLPT Trigger: CGTGGGCAAAGAGAGCCACCAGGGCTGGGCAGTCCT...GGTCAGGAGGCGGGAGCCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
||
| CDS-3UTR GCA 90 bp | AGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGCCCAGACTAGCCGGTaGAGCGGGAAGGTGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SLTASLSSVPRSQAQQQTAQTSR*SGKVGP Trigger: GGGCCCCACCTTCCCGCTGCACCGGCTAGTCTGGGC...TGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTAGGCTTTCCTGCAGGGCCTGCTCCAACTGAAGCTGCTCTTCAAACACTGGCCCAGACTAGCCGGTaGAGCGGGAAGGTGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AVGFPAGPAPTEAALQTLAQTSR*SGKVGP Trigger: GGGCCCCACCTTCCCGCTGCACCGGCTAGTCTGGGC...CAGTGTTTGAAGAGCAGCTTCAGTTGGAGCAGGCCCTGCAGGAAAGCCTACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCTGGAGCTAGGGTCTCTGTGTGCACCACCTGCCGGTCATGATCCACTTCTTGCGGCTGTGCAGTaGGGCCTCCAGTTCGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AELELGSLCAPPAGHDPLLAAVQ*GLQFAV Trigger: CACCGCGAACTGGAGGCCGCACTGCACAGCCGCAAG...AAGTGGATCATGACCGGCAGGTGGTGCACACAGAGACCCTAGCTCCAGCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000167215.2 |
||
| CDS-3UTR GCA 90 bp | GTGCACCACCTGCCGGTCATGATCCACTTCCATCACCAAGGCTCCCGCCTCCTGCCTTGGGGGTCCTCCTaGTCAATGTCGTGCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VHHLPVMIHFHHQGSRLLPWGSS*SMSCLR Trigger: CCGCAAGCACGACATTGAGCAGGAGGACCCCCAAGG...CAGGAGGCGGGAGCCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGGTGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000167215.2 |
||
| CDS-3UTR GCA 90 bp | CACCTGCCGGTCATGATCCACTTCCATCACCAAGGCTCCCGCCTCCTGACCCCTCCTTGGGGGTCCTCCTaGTCAATGTCGTGCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HLPVMIHFHHQGSRLLTPPWGSS*SMSCLR Trigger: CCGCAAGCACGACATTGAGCAGGAGGACCCCCAAGG...AGGGGTCAGGAGGCGGGAGCCTTGGTGATGGAAGTGGATCATGACCGGCAGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000167215.2 |
||
| CDS-3UTR GCA 90 bp | AAATTACAAAACCAGGCAGAAGGCATGGCCCTGGGGAGCCGTCCCAAGGCCAGGGGGCTGGCTGCCTGCTaGACGGGAGCCAAAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLQNQAEGMALGSRPKARGLAAC*TGAKVW Trigger: CCACACTTTGGCTCCCGTGCAGCAGGCAGCCAGCCC...CCTGGCCTTGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGTTTTGTAATTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | AAATGGCAGAACTGGAGTTGGGGACGCACACCGAGCTCACAGGCTCATCACAGCGCCTCCAGTTCGCGGTaGCGGTTCGCCCAGACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KWQNWSWGRTPSSQAHHSASSSR*RFAQTS Trigger: GCTAGTCTGGGCGAACCGGCACCGCGAACTGGAGGC...GCTGTGATGAGCCTGTGAGCTCGGTGTGCGTCCCCAACTCCAGTTCTGCCATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
||
| CDS-3UTR GCA 90 bp | GGATGGAGGTGTCTTCTGAGGAGATTCTGGACCCCTGGACTCTGTGGACAGCTGCTTGCGGCTGTGCAGTaGGGCCTCCAGTTCGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GWRCLLRRFWTPGLCGQLLAAVQ*GLQFAV Trigger: CACCGCGAACTGGAGGCCGCACTGCACAGCCGCAAG...CAGCTGTCCACAGAGTCCAGGGGTCCAGAATCTCCTCAGAAGACACCTCCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGCACCACCTGCCGGTCATGATCCACTTCCATCACCAAGGCTCCCGCCTCGTCTCCAGTGCTGACTaGCTCCTGCAGGACTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVHHLPVMIHFHHQGSRLVSSAD*LLQDCP Trigger: TGGGCAGTCCTGCAGGAGGCAGTCAGCACTGGAGAC...GAGGCGGGAGCCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGGTGCACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGATAGCTGTAGGGTTGGTGGGGCTGGCTGCCTGCTGCACGGGAGCCAACTCCTTCGGCCACGCTaGCAGGTCATGTGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRDSCRVGGAGCLLHGSQLLRPR*QVMCSK Trigger: CTTTGAGCACATGACCTGGCAGCGTGGCCGAAGGAG...TTGGCTCCCGTGCAGCAGGCAGCCAGCCCCACCAACCCTACAGCTATCTCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
||
| CDS-3UTR GCA 90 bp | GGATCCGCTGTAAGTCGTCTTCTTCCTGCTGACCCCGTCGCTCCAACTCCTCCTGTCTCCAGTGCTGACTaGCTCCTGCCCAGCCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSAVSRLLPADPVAPTPPVSSAD*LLPSPG Trigger: ACCAGGGCTGGGCAGGAGGCAGTCAGCACTGGAGAC...AGGAGGAGTTGGAGCGACGGGGTCAGCAGGAAGAAGACGACTTACAGCGGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| CDS-3UTR CCA 90 bp | GTGCACCACCTGCCGGTCATGATCCACTTCCATCACCAAGGCTCCCGCCTCCTGCAGCCAACCTCTGTGTaGCCCTCTGGAAGTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VHHLPVMIHFHHQGSRLLQPTSV*PSGSPD Trigger: ATCGGGACTTCCAGAGGGCCACACAGAGGTTGGCTG...CAGGAGGCGGGAGCCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGGTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
||
| CDS-3UTR GCA 90 bp | TCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCTCGTGCTTGCGGCTGTaGAGTGCGGCCTCCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: STSVSLLAYLQCPGPKLSSCLRL*SAASSS Trigger: CGAACTGGAGGCCGCACTGCACAGCCGCAAGCACGA...GCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCTGCTCCAACTGAAGCTGCTCTTCAAACACTGTGACTCGGGGAGGAGGCTCTGCCTCTGTGCCTaGCTCAAGCAGGCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGLLQLKLLFKHCDSGRRLCLCA*LKQALL Trigger: CAGCAGAGCCTGCTTGAGGCAGGCACAGAGGCAGAG...CCTCCTCCCCGAGTCACAGTGTTTGAAGAGCAGCTTCAGTTGGAGCAGGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166031.2 |
||
| CDS-3UTR GCA 90 bp | TCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCTCCCACACCGTCACCTaGTCTGCCTCTGTGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: STSVSLLAYLQCPGPKLSSHTVT*SASVPA Trigger: GGCAGGCACAGAGGCAGAGCAGGTGACGGTGTGGGA...GCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | CACCACCTGCCGGTCATGATCCACTTCCATCACCAAGGCTCCCGCCTCCTGACCCTCTGTGTGGCCCTCTaGAAGTCCCGATACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HHLPVMIHFHHQGSRLLTLCVAL*KSRYWS Trigger: ACTCCAGTATCGGGACTTCCAGAGGGCCACACAGAG...GGTCAGGAGGCGGGAGCCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
||
| CDS-3UTR CCA 90 bp | TCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCACGGGAGCCAAAGTGTaGGAGGAGTGCTGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STSVSLLAYLQCPGPKLSTGAKV*EECCWA Trigger: GGCCCAGCAGCACTCCTCCCACACTTTGGCTCCCGT...GCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAAACCAGGCAGAAGGCATGGCCCTGGGGAGCCGTCCCAAGGCCAGGCTGCTCCTCAAAGCTTaGGGGTGCAGGGGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLQNQAEGMALGSRPKARLLLKA*GCRGWR Trigger: CCTCCATCCCCTGCACCCCCAAGCTTTGAGGAGCAG...CCTGGCCTTGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGTTTTGTAATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR TCA 90 bp | AAATTACAAAACCAGGCAGAAGGCATGGCCCTGGGGAGCCGTCCCAAGGCCAGGCTCCTCCTGTTCCCTTaGAGACAACTCCAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLQNQAEGMALGSRPKARLLLFP*RQLQGQ Trigger: CTGGCCCTGGAGTTGTCTTCAAGGGAACAGGAGGAG...CCTGGCCTTGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGTTTTGTAATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | GAGATAGCTGTAGGGTTGGTGGGGCTGGCTGCCTGCTGCACGGGAGCCAAAGTGCCTGGTGGCTCTCTTTaGCCACGTTGGCATTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: EIAVGLVGLAACCTGAKVPGGSL*PRWHYV Trigger: GACATAATGCCAACGTGGGCAAAGAGAGCCACCAGG...CACTTTGGCTCCCGTGCAGCAGGCAGCCAGCCCCACCAACCCTACAGCTATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| CDS-3UTR GCA 90 bp | AGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTGTGGGAGGAGTGCTaGTGGGCCATGCCCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTASLSSVPRSQAQQQTVWEEC*WAMPRK Trigger: CTTCCTGGGCATGGCCCAGCAGCACTCCTCCCACAC...TGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | GTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGAAAGTGTGGGAGGAGTaGTGCTGGGCCATGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLLAYLQCPGPKLSSRQKVWEE*CWAMPR Trigger: CCTGGGCATGGCCCAGCAGCACTCCTCCCACACTTT...CTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | GTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGCTCTGCCTCTGTGCCTaGCTCAAGCAGGCTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSLLAYLQCPGPKLSSRQLCLCA*LKQALL Trigger: CAGCAGAGCCTGCTTGAGGCAGGCACAGAGGCAGAG...CTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR GCA 90 bp | GTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGGGGGAGGAGGGTGAATaGCAGGCCGTGTGTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSLLAYLQCPGPKLSSRQGEEGE*QAVCWS Trigger: TGACCAACACACGGCCTGGCATTCACCCTCCTCCCC...CTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CCA 90 bp | CCACCTGCCGGTCATGATCCACTTCCATCACCAAGGCTCCCGCCTCCTGACCCCTCTCTTTGCCCACGTTaGCATTATGTCGGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PPAGHDPLPSPRLPPPDPSLCPR*HYVGGG Trigger: TCCTCCTCCGACATAATGCCAACGTGGGCAAAGAGA...GGGGTCAGGAGGCGGGAGCCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000167215.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGGTCTCTGTGTGCACCACCTGCCGGTCATGATCCACTTCCATCACCAAGGACTGCCCAGCCCTGGTaGCTCTCTTTGCCCACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGSLCAPPAGHDPLPSPRTAQPW*LSLPTL Trigger: CAACGTGGGCAAAGAGAGCCACCAGGGCTGGGCAGT...CCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGGTGCACACAGAGACCCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
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| CDS-3UTR CCA 90 bp | AGCAGAGATAGCTGTAGGGTTGGTGGGGCTGGCTGCCTGCTGCACGGGAGCCAATTGCGAGTGTCCAGGTaGGTGGAGACAATAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRDSCRVGGAGCLLHGSQLRVSR*VETIGE Trigger: CTCTCCTATTGTCTCCACCCACCTGGACACTCGCAA...TTGGCTCCCGTGCAGCAGGCAGCCAGCCCCACCAACCCTACAGCTATCTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
||
| CDS-3UTR CCA 90 bp | AATAAATTACAAAACCAGGCAGAAGGCATGGCCCTGGGGAGCCGTCCCAAGGCCTGGGAGGAGTGCTGCTaGGCCATGCCCAGGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NKLQNQAEGMALGSRPKAWEECC*AMPRKD Trigger: GTCCTTCCTGGGCATGGCCCAGCAGCACTCCTCCCA...GGCCTTGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGTTTTGTAATTTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | GAGATAGCTGTAGGGTTGGTGGGGCTGGCTGCCTGCTGCACGGGAGCCAAAGTGTCACCAGCTCCACATTaGTGGCACTGTACACCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EIAVGLVGLAACCTGAKVSPAPH*WHCTPL Trigger: GAGAGGTGTACAGTGCCACCAATGTGGAGCTGGTGA...CACTTTGGCTCCCGTGCAGCAGGCAGCCAGCCCCACCAACCCTACAGCTATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGATCGTCTTCTTCCTGCTaGCCCCGTCGCTCCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVSLLAYLQCPGPKLSSRSSSSC*PRRSNS Trigger: GGAGTTGGAGCGACGGGGTCAGCAGGAAGAAGACGA...TCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | AGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACACCTTGGGGGTCCTCCTaGTCAATGTCGTGCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTASLSSVPRSQAQQQTPWGSS*SMSCLR Trigger: CCGCAAGCACGACATTGAGCAGGAGGACCCCCAAGG...TGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAACCCGAAGGGGCTCGCTaGGCTCAGCACCCAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LYFHLSLTASLSSVPRSQPEGAR*AQHPAH Trigger: GTGTGCTGGGTGCTGAGCGCAGCGAGCCCCTTCGGG...TTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | AGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACACACCGTCACCTGCTCTaGCTCTGTGCCTGCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTASLSSVPRSQAQQQTHRHLL*LCACLK Trigger: CTTGAGGCAGGCACAGAGGCAGAGCAGGTGACGGTG...TGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGTCAAAGTATTCCTCAGCAGAGATAGCTGTAGGGTTGGTGGGGCTGGCAGCCAGCAGCGCTTCTaGTTCATGCAGAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGVKVFLSRDSCRVGGAGSQQRF*FMQSWS Trigger: GCTCCAGCTCTGCATGAACCAGAAGCGCTGCTGGCT...GCCAGCCCCACCAACCCTACAGCTATCTCTGCTGAGGAATACTTTGACCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAAACCAGGCAGAAGGCATGGCCCTGGGGAGCCGTCCCAAGGCCAGGCTTGACAGGGAAGCCTaGTGGGAGACGCAGAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLQNQAEGMALGSRPKARLDREA*WETQSD Trigger: ATCACTCTGCGTCTCCCACCAGGCTTCCCTGTCAAG...CCTGGCCTTGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGTTTTGTAATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | AAACACTGTGACTCGGGGAGGAGGGTGAATGCCAGGCCGTGTGTTGGTCAGGGCGGGCTGAAGCAGAAATaGCAGAACTGGAGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KHCDSGRRVNARPCVGQGGLKQK*QNWSWG Trigger: TCCCCAACTCCAGTTCTGCCATTTCTGCTTCAGCCC...GCCCTGACCAACACACGGCCTGGCATTCACCCTCCTCCCCGAGTCACAGTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166031.2 |
||
| 3UTR CAA 72 bp | GGGTCAAAGTATTCCTCAGCAGAGATAGCTGTAGGGTaGGTGGGGCTGGCTGCCTGCTGCACGGGAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSKYSSAEIAVG*VGLAACCTGAK Trigger: TTTGGCTCCCGTGCAGCAGGCAGCCAGCCCCACCAACCCTACAGCTATCTCTGCTGAGGAATACTTTGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000170283.2 |
||
| CDS-3UTR GCA 90 bp | GGTCTCTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTGCCTCCAGTTCGCGGTaGCGGTTCGCCCAGACTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLFISTSVSLLAYLQCPGASSSR*RFAQTS Trigger: GCTAGTCTGGGCGAACCGGCACCGCGAACTGGAGGC...ACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTCTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCTTGCGGCTGTGCAGTaGGGCCTCCAGTTCGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLFISTSVSLLAYLQCPGLAAVQ*GLQFAV Trigger: CACCGCGAACTGGAGGCCGCACTGCACAGCCGCAAG...ACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 |
||
| CDS-3UTR GCA 90 bp | TTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCTCCTTCGGCCACGCTaGCAGGTCATGTGCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FHLSLTASLSSVPRSQAQLLRPR*QVMCSK Trigger: CTTTGAGCACATGACCTGGCAGCGTGGCCGAAGGAG...CTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | GGTCTCTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTGTTGGTGGGGCTGGCTaGCTGCTGCACGGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLFISTSVSLLAYLQCPGVGGAG*LLHGSQ Trigger: TTGGCTCCCGTGCAGCAGGCAGCCAGCCCCACCAAC...ACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGTGCTGACTGCCTCCTaGCCAGCCCTGGTGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LYFHLSLTASLSSVPRSQVLTAS*PALVAL Trigger: GAGAGCCACCAGGGCTGGGCAGGAGGCAGTCAGCAC...TTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
||
| CDS-3UTR CCA 90 bp | AAATTACAAAACCAGGCAGAAGGCATGGCCCTGGGGAGCCGTCCCAAGGCCAGGGCACCTCGAATACAGTaGGGTCCACCTCACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLQNQAEGMALGSRPKARAPRIQ*GPPHME Trigger: TTCCATGTGAGGTGGACCCCACTGTATTCGAGGTGC...CCTGGCCTTGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGTTTTGTAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | CTAGGGTCTCTGTGTGCACCACCTGCCGGTCATGATCCACTTCCATCACCAAGGCGCTCGGGCACATCTTaGACACAAGAGGTACTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LGSLCAPPAGHDPLPSPRRSGTS*TQEVLT Trigger: CGTCAGTACCTCTTGTGTCCAAGATGTGCCCGAGCG...CCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGGTGCACACAGAGACCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
||
| CDS-3UTR CCA 90 bp | AGAGATAGCTGTAGGGTTGGTGGGGCTGGCTGCCTGCTGCACGGGAGCCAAAGTCCAGCTCCACATTGGTaGCACTGTACACCTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RDSCRVGGAGCLLHGSQSPAPHW*HCTPLK Trigger: TTTGAGAGGTGTACAGTGCCACCAATGTGGAGCTGG...ACTTTGGCTCCCGTGCAGCAGGCAGCCAGCCCCACCAACCCTACAGCTATCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAACCTCCTGCCCAGCCCTaGTGGCTCTCTTTGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSVPRSQAQQQTVYKPPAQP*WLSLPT Trigger: CGTGGGCAAAGAGAGCCACCAGGGCTGGGCAGGAGG...TTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
||
| CDS-3UTR TCA 90 bp | GCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAACAGGGTCTCCAGTGCTaGCTGCCTCCTGCAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSVPRSQAQQQTVYKQGLQC*LPPAGL Trigger: CAGTCCTGCAGGAGGCAGTCAGCACTGGAGACCCTG...TTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR TCA 90 bp | AGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACATGGCCATCAGGTCAATaGTGGGTGTCACCTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLTASLSSVPRSQAQQQTWPSGQ*WVSPGH Trigger: GTGACCAGGTGACACCCATCATTGACCTGATGGCCA...TGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | GAGCTAGGGTCTCTGTGTGCACCACCTGCCGGTCATGATCCACTTCCATCACCACCTGGTGGCTCTCTTTaGCCACGTTGGCATTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELGSLCAPPAGHDPLPSPPGGSL*PRWHYV Trigger: GACATAATGCCAACGTGGGCAAAGAGAGCCACCAGG...TGGTGATGGAAGTGGATCATGACCGGCAGGTGGTGCACACAGAGACCCTAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000167215.2 |
||
| CDS-3UTR GCA 90 bp | CTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAATGTGCTGACTGCCTCCTaGAGGACTGCCCAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAYLQCPGPKLSSRQFINVLTAS*RTAQPW Trigger: CCAGGGCTGGGCAGTCCTGCAGGAGGCAGTCAGCAC...ATTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | GCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAAAGCCGACTGGCCACGTaGTCCTCACTAGGCCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSVPRSQAQQQTVYKSRLAT*SSLGRM Trigger: CATGCGGCCTAGTGAGGAGCACGTGGCCAGTCGGCT...TTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | CCCCCTTTGTTCCTTAACTTGTCCTGGTCAGAGAGGTGTTCTGTTCTTGTGCGTAGCCGACTGGCCACGTaGTCCTCACTAGGCCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PPLFLNLSWSERCSVLVRSRLAT*SSLGRM Trigger: CATGCGGCCTAGTGAGGAGCACGTGGCCAGTCGGCT...ACGCACAAGAACAGAACACCTCTCTGACCAGGACAAGTTAAGGAACAAAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCCAGCAGCGCTTCTaGTTCATGCAGAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTSVSLLAYLQCPGPKLSQQRF*FMQSWS Trigger: GCTCCAGCTCTGCATGAACCAGAAGCGCTGCTGGCT...GAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | TTCAAACACTGTGACTCGGGGAGGAGGGTGAATGCCAGGCCGTGTGTTGGTCAGGCACCTCGAATACAGTaGGGTCCACCTCACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKHCDSGRRVNARPCVGQAPRIQ*GPPHME Trigger: TTCCATGTGAGGTGGACCCCACTGTATTCGAGGTGC...CTGACCAACACACGGCCTGGCATTCACCCTCCTCCCCGAGTCACAGTGTTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166031.2 |
||
| 3UTR CAA 72 bp | CGCTTCCACACACGGTACACATCGCTCGGGCACATCTaGGACACAAGAGGTACCCAGCTAGTGAACTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFHTRYTSLGHI*DTRGTQLVNSH Trigger: ATGGGAGTTCACTAGCTGGGTACCTCTTGTGTCCAAGATGTGCCCGAGCGATGTGTACCGTGTGTGGAAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
||
| 3UTR CAA 72 bp | AAAGGGCTTCCTGAAGCAGAAATGGCAGAACTGGAGTaGGGGACGCACACCGAGCTCACAGGCTCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLPEAEMAELE*GTHTELTGSSQ Trigger: CTGTGATGAGCCTGTGAGCTCGGTGTGCGTCCCCAACTCCAGTTCTGCCATTTCTGCTTCAGGAAGCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
||
| CDS-3UTR TCA 90 bp | CTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAAAGGCTCCCGCCTCCTaGCCCCTGAAGATGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LYFHLSLTASLSSVPRSQKAPAS*PLKMKL Trigger: GAGCTTCATCTTCAGGGGTCAGGAGGCGGGAGCCTT...TTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR TCA 90 bp | CCCCCTTTGTTCCTTAACTTGTCCTGGTCAGAGAGGTGTTCTGTTCTTGTGCGTAAGGCTCCCGCCTCCTaGCCCCTGAAGATGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPLFLNLSWSERCSVLVRKAPAS*PLKMKL Trigger: GAGCTTCATCTTCAGGGGTCAGGAGGCGGGAGCCTT...ACGCACAAGAACAGAACACCTCTCTGACCAGGACAAGTTAAGGAACAAAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
||
| CDS-3UTR TCA 90 bp | CTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAATACTCGGGGAGGAGGGTaGATGCCAGGCCGTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAYLQCPGPKLSSRQFINTRGGG*MPGRVL Trigger: CAACACACGGCCTGGCATTCACCCTCCTCCCCGAGT...ATTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR TCA 90 bp | ATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCGCTCTTCAAACACTGTaGCTCGGGGAGGAGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISTSVSLLAYLQCPGPKLALQTL*LGEEGE Trigger: TTCACCCTCCTCCCCGAGTCACAGTGTTTGAAGAGC...GAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR TCA 90 bp | TCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGAAGGGCCTGCTCCAACTaGAGCTGCTCTTCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: SVSLLAYLQCPGPKLSSRRACSN*SCSSNT Trigger: AGTGTTTGAAGAGCAGCTTCAGTTGGAGCAGGCCCT...TCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | TCTTCTCAGACCGCCATCCCCAGATACCACATTTGTTCCTCTCAAAGGCTACATTCGTGCTTGCGGCTGTaGAGTGCGGCCTCCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SSQTAIPRYHICSSQRLHSCLRL*SAASSS Trigger: CGAACTGGAGGCCGCACTGCACAGCCGCAAGCACGA...ATGTAGCCTTTGAGAGGAACAAATGTGGTATCTGGGGATGGCGGTCTGAGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACACCTGGTGGCTCTCTTTaGCCACGTTGGCATTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTASLSSVPRSQAQQQTPGGSL*PRWHYV Trigger: GACATAATGCCAACGTGGGCAAAGAGAGCCACCAGG...TGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTCTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTGTCTCCAGTGCTGACTaGCTCCTGCAGGACTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLFISTSVSLLAYLQCPGVSSAD*LLQDCP Trigger: TGGGCAGTCCTGCAGGAGGCAGTCAGCACTGGAGAC...ACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | TTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGTCTCAAAGGCTACATTaGGAGTGTCCAGGTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHLSLTASLSSVPRSQAQSQRLH*ECPGGW Trigger: CCACCCACCTGGACACTCGCAATGTAGCCTTTGAGA...CTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | TCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGATCTGTGAGTGACAGCTaGAGGATCCGCTGTAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SVSLLAYLQCPGPKLSSRSVSDS*RIRCKS Trigger: CGACTTACAGCGGATCCTGCAGCTGTCACTCACAGA...TCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | AAATGGCAGAACTGGAGTTGGGGACGCACACCGAGCTCACAGGCTCATCACAGCTCTCTTTGCCCACGTTaGCATTATGTCGGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KWQNWSWGRTPSSQAHHSSLCPR*HYVGGG Trigger: TCCTCCTCCGACATAATGCCAACGTGGGCAAAGAGA...GCTGTGATGAGCCTGTGAGCTCGGTGTGCGTCCCCAACTCCAGTTCTGCCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCCGCTCGGGCACATCTTaGACACAAGAGGTACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFISTSVSLLAYLQCPGPRSGTS*TQEVPS Trigger: GCTGGGTACCTCTTGTGTCCAAGATGTGCCCGAGCG...GGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | AATAAATTACAAAACCAGGCAGAAGGCATGGCCCTGGGGAGCCGTCCCAAGGCCCCAGCTCCACATTGGTaGCACTGTACACCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NKLQNQAEGMALGSRPKAPAPHW*HCTPLP Trigger: AGGCAAAGGTGTACAGTGCCACCAATGTGGAGCTGG...GGCCTTGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGTTTTGTAATTTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CCA 90 bp | CTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAATTGCCAGGCCGTGTGTTaGTCAGGGCTTCCCACACCG | + |
|
Preference number: 4 (lower is better) Translates to: LAYLQCPGPKLSSRQFINCQAVC*SGLPTP Trigger: CGGTGTGGGAAGCCCTGACCAACACACGGCCTGGCA...ATTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR TCA 90 bp | CTCTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCACCACCTGCCGGTCATaGTCCACTTCCATCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFISTSVSLLAYLQCPGPTTCRS*STSITK Trigger: CTTGGTGATGGAAGTGGATCATGACCGGCAGGTGGT...GGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGGGTCAAAGTATTCCTCAGCAGAGATAGCTGTAGGGTTGGTGGGGCTGTCTCAAAGGCTACATTaGGAGTGTCCAGGTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLGSKYSSAEIAVGLVGLSQRLH*ECPGGW Trigger: CCACCCACCTGGACACTCGCAATGTAGCCTTTGAGA...CAGCCCCACCAACCCTACAGCTATCTCTGCTGAGGAATACTTTGACCCCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCCCCAAGGACAGTGGGTaGTCCTCACTTAGCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFISTSVSLLAYLQCPGPPKDSG*SSLSHS Trigger: ACTGTGGCTAAGTGAGGAGCACCCACTGTCCTTGGG...GGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAGAG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | CTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAATAGGGCCAGGCGAAGCTaGTCCTCAAAGCTTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAYLQCPGPKLSSRQFINRARRS*SSKLGG Trigger: ACCCCCAAGCTTTGAGGAGCAGCTTCGCCTGGCCCT...ATTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | AATAAATTACAAAACCAGGCAGAAGGCATGGCCCTGGGGAGCCGTCCCAAGGCCTCTCTTTGCCCACGTTaGCATTATGTCGGAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NKLQNQAEGMALGSRPKASLCPR*HYVGGG Trigger: TCCTCCTCCGACATAATGCCAACGTGGGCAAAGAGA...GGCCTTGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGTTTTGTAATTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAATACTGCCCAGCCCTGGTaGCTCTCTTTGCCCACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LAYLQCPGPKLSSRQFINTAQPW*LSLPTL Trigger: CAACGTGGGCAAAGAGAGCCACCAGGGCTGGGCAGT...ATTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | GCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAATAAAAGGACTGCCCAGCCCTaGTGGCTCTCTTTGCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: AYLQCPGPKLSSRQFINKRTAQP*WLSLPT Trigger: CGTGGGCAAAGAGAGCCACCAGGGCTGGGCAGTCCT...TTTATTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | CTGGAGCTAGGGTCTCTGTGTGCACCACCTGCCGGTCATGATCCACTTCCATCATGGAAGTCCCGATACTaGAGTACCAACTGTACCATC | + |
|
Preference number: 4 (lower is better) Translates to: LELGSLCAPPAGHDPLPSWKSRY*STNCTI Trigger: GATGGTACAGTTGGTACTCCAGTATCGGGACTTCCA...TGATGGAAGTGGATCATGACCGGCAGGTGGTGCACACAGAGACCCTAGCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCTTGCGAGTGTCCAGGTaGGTGGAGACAATAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISTSVSLLAYLQCPGPKLLRVSR*VETIGE Trigger: CTCTCCTATTGTCTCCACCCACCTGGACACTCGCAA...GAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | AATAAATTACAAAACCAGGCAGAAGGCATGGCCCTGGGGAGCCGTCCCAAGGCCTCACCAGCTCCACATTaGTGGCACTGTACACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKLQNQAEGMALGSRPKASPAPH*WHCTPL Trigger: CAAAGGTGTACAGTGCCACCAATGTGGAGCTGGTGA...GGCCTTGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGTTTTGTAATTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | GTGTCTTCTGAGGAGATTCTGGACCCCTGGACTCTGTGGACAGCTGTAGGCTTTGGGGTCCACCTCACATaGAAAAGGGCTGAAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSEEILDPWTLWTAVGFGVHLT*KRAEAE Trigger: TTCTGCTTCAGCCCTTTTCCATGTGAGGTGGACCCC...AAAGCCTACAGCTGTCCACAGAGTCCAGGGGTCCAGAATCTCCTCAGAAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000166031.2 |
||
| CDS-3UTR TCA 90 bp | CTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGGGGAATCTCAATCTTaGCAGGGAAGCCTGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LYFHLSLTASLSSVPRSQGESQS*QGSLVG Trigger: TCCCACCAGGCTTCCCTGTCAAGATTGAGATTCCCC...TTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | TCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCGTTGCCTTGAACCTCTaGACTTTGCTAGACATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: STSVSLLAYLQCPGPKLSVALNL*TLLDIS Trigger: TGAGATGTCTAGCAAAGTGCAGAGGTTCAAGGCAAC...GCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAACTCAAAGCTTGGGGGTaGAGGGGATGGAGGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYFHLSLTASLSSVPRSQLKAWG*RGWRCL Trigger: AAGACACCTCCATCCCCTGCACCCCCAAGCTTTGAG...TTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAACTCTGTGTGGCCCTCTaGAAGTCCCGATACTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYFHLSLTASLSSVPRSQLCVAL*KSRYWS Trigger: ACTCCAGTATCGGGACTTCCAGAGGGCCACACAGAG...TTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | CTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAATCAGCCAACCTCTGTGTaGCCCTCTGGAAGTCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAYLQCPGPKLSSRQFINQPTSV*PSGSPD Trigger: ATCGGGACTTCCAGAGGGCCACACAGAGGTTGGCTG...ATTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | ATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCCGGGCATTGAGCACATaGAAGAGGGGAATCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: ISTSVSLLAYLQCPGPKLRALST*KRGISI Trigger: GATTGAGATTCCCCTCTTCCATGTGCTCAATGCCCG...GAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR TCA 90 bp | ATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCTTCTGGATTCCAGGCTaGAGCTGGGGTCAAAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: ISTSVSLLAYLQCPGPKLFWIPG*SWGQSI Trigger: AATACTTTGACCCCAGCTTCAGCCTGGAATCCAGAA...GAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CCA 90 bp | GCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAAGAGATTCTGGACCCCTaGACTCTGTGGACAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSVPRSQAQQQTVYKEILDP*TLWTAV Trigger: TACAGCTGTCCACAGAGTCCAGGGGTCCAGAATCTC...TTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| 3UTR CAA 72 bp | CCCCAGATACCACATTTGTTCCTCTCAAAGGCTACATaGCGAGTGTCCAGGTGGGTGGAGACAATAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQIPHLFLSKAT*RVSRWVETIGE Trigger: CTCTCCTATTGTCTCCACCCACCTGGACACTCGCAATGTAGCCTTTGAGAGGAACAAATGTGGTATCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| 3UTR CAA 72 bp | TCCTTAACTTGTCCTGGTCAGAGAGGTGTTCTGTTCTaGTGCGTGTCACCAGCTCCACATTGGTGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLTCPGQRGVLF*CVSPAPHWWHC Trigger: ACAGTGCCACCAATGTGGAGCTGGTGACACGCACAAGAACAGAACACCTCTCTGACCAGGACAAGTTAAGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| CDS-3UTR GCA 90 bp | CTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGGCACTGTACACCTTTaGCTCGTAGCCACTAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LYFHLSLTASLSSVPRSQGTVHL*LVATNR Trigger: TCTGTTAGTGGCTACGAGGCAAAGGTGTACAGTGCC...TTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CCA 90 bp | GGTCTCTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTTGGAAGTCCCGATACTaGAGTACCAACTGTACCATC | + |
|
Preference number: 4 (lower is better) Translates to: GLFISTSVSLLAYLQCPGWKSRY*STNCTI Trigger: GATGGTACAGTTGGTACTCCAGTATCGGGACTTCCA...ACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAGAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR TCA 90 bp | GCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAATAAATGGAAAAGGGCTTCCTaGAGCAGAAATGGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: AYLQCPGPKLSSRQFINKWKRAS*SRNGRT Trigger: AGTTCTGCCATTTCTGCTTCAGGAAGCCCTTTTCCA...TTTATTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CCA 90 bp | GCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAATTCCTTAACTTGTCCTaGTCAGAGAGGTGTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLSSVPRSQAQQQTVYKFLNLS*SERCSV Trigger: AACAGAACACCTCTCTGACCAGGACAAGTTAAGGAA...TTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS GCA 90 bp | TCAATGTCGTGCTTGCGGCTGTGCAGTGCGGCCTCCAGTTCGCGGTaGCGGTTCGCCCAGACTAGCCGGTGCAGCGGGAAGGTGGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SMSCLRLCSAASSSR*RFAQTSRCSGKVGP Trigger: GGGCCCCACCTTCCCGCTGCACCGGCTAGTCTGGGCGAACCGGCACCGCGAACTGGAGGCCGCACTGCACAGCCGCAAGCACGACATTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 ENSMUST00000167215.2 |
||
| CDS-3UTR CAA 90 bp | CCACCTGCCGGTCATGATCCACTTCCATCACCAAGGCTCCCGCCTCCTGACCCCCTCTCTTTGCCCACGTaGGCATTATGTCGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PPAGHDPLPSPRLPPPDPLSLPT*ALCRRR Trigger: CCTCCTCCGACATAATGCCAACGTGGGCAAAGAGAG...GGGGTCAGGAGGCGGGAGCCTTGGTGATGGAAGTGGATCATGACCGGCAGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163858.8 ENSMUST00000167215.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGATAGCTGTAGGGTTGGTGGGGCTGGCTGCCTGCTGCACGGGAGCCAACTCTCTTTGCCCACGTaGGCATTATGTCGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRDSCRVGGAGCLLHGSQLSLPT*ALCRRR Trigger: CCTCCTCCGACATAATGCCAACGTGGGCAAAGAGAG...TTGGCTCCCGTGCAGCAGGCAGCCAGCCCCACCAACCCTACAGCTATCTCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
||
| CDS-3UTR CAA 90 bp | TCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCGAGATAGCTGTAGGGTaGGTGGGGCTGGCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: STSVSLLAYLQCPGPKLSEIAVG*VGLAAC Trigger: GCAGGCAGCCAGCCCCACCAACCCTACAGCTATCTC...GCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS-3UTR CAA 90 bp | TCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCATGCCAGGCCGTGTGTaGGTCAGGGCTTCCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: STSVSLLAYLQCPGPKLSMPGRV*VRASHT Trigger: GGTGTGGGAAGCCCTGACCAACACACGGCCTGGCAT...GCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS CCA 90 bp | GGTGGCACTGTACACCTCTCAAAGGCTACATTGCGAGTGTCCAGGTaGGTGGAGACAATAGGAGAGGTGAGCCGACTGGCCACGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGTVHLSKATLRVSR*VETIGEVSRLATCS Trigger: GGAGCACGTGGCCAGTCGGCTCACCTCTCCTATTGTCTCCACCCACCTGGACACTCGCAATGTAGCCTTTGAGAGGTGTACAGTGCCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
||
| CDS CCA 90 bp | GGAATGCCAGCCAACCTCTGTGTGGCCCTCTGGAAGTCCCGATACTaGAGTACCAACTGTACCATCTCAGGGTCTCCAGTGCTGACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GMPANLCVALWKSRY*STNCTISGSPVLTA Trigger: GGCAGTCAGCACTGGAGACCCTGAGATGGTACAGTTGGTACTCCAGTATCGGGACTTCCAGAGGGCCACACAGAGGTTGGCTGGCATTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000167215.2 |
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| CDS-3UTR CAA 90 bp | GTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGCTCTCTTTGCCCACGTaGGCATTATGTCGGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSLLAYLQCPGPKLSSRQLSLPT*ALCRRR Trigger: CCTCCTCCGACATAATGCCAACGTGGGCAAAGAGAG...CTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 |
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| CDS-3UTR CAA 90 bp | CCACACACGGTACACATCGCTCGGGCACATCTTGGACACAAGAGGTACCCAGCTCCCTGGTGGCTCTCTTaGCCCACGTTGGCATTATGT | + |
|
Preference number: 5 (lower is better) Translates to: PHTVHIARAHLGHKRYPAPWWLS*PTLALC Trigger: ACATAATGCCAACGTGGGCAAAGAGAGCCACCAGGG...AGCTGGGTACCTCTTGTGTCCAAGATGTGCCCGAGCGATGTGTACCGTGTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163858.8 |
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| CDS CCA 90 bp | ACCTCACATGGAAAAGGGCTGAAGCAGAAATGGCAGAACTGGAGTTaGGGACGCACACCGAGCTCACAGGCTCATCACAGCCGCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TSHGKGLKQKWQNWS*GRTPSSQAHHSRKG Trigger: ACCTTTGCGGCTGTGATGAGCCTGTGAGCTCGGTGTGCGTCCCCAACTCCAGTTCTGCCATTTCTGCTTCAGCCCTTTTCCATGTGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166031.2 |
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| CDS-3UTR CAA 90 bp | TTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCTCTCAAAGGCTACATaGCGAGTGTCCAGGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FHLSLTASLSSVPRSQAQLSKAT*RVSRWV Trigger: CACCCACCTGGACACTCGCAATGTAGCCTTTGAGAG...CTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CAA 90 bp | ATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCCCCTGGTGGCTCTCTTaGCCCACGTTGGCATTATGT | + |
|
Preference number: 5 (lower is better) Translates to: ISTSVSLLAYLQCPGPKLPWWLS*PTLALC Trigger: ACATAATGCCAACGTGGGCAAAGAGAGCCACCAGGG...GAGCTTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGGGTCAAAGTATTCCTCAGCAGAGATAGCTGTAGGGTTGGTGGGGCTGCTCTCAAAGGCTACATaGCGAGTGTCCAGGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KLGSKYSSAEIAVGLVGLLSKAT*RVSRWV Trigger: CACCCACCTGGACACTCGCAATGTAGCCTTTGAGAG...CAGCCCCACCAACCCTACAGCTATCTCTGCTGAGGAATACTTTGACCCCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
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| CDS CCA 90 bp | TTGTTGAGCAGTTCTGGAATGCCAGCCAACCTCTGTGTGGCCCTCTaGAAGTCCCGATACTGGAGTACCAACTGTACCATCTCAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSSSGMPANLCVAL*KSRYWSTNCTISGS Trigger: AGACCCTGAGATGGTACAGTTGGTACTCCAGTATCGGGACTTCCAGAGGGCCACACAGAGGTTGGCTGGCATTCCAGAACTGCTCAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000167215.2 |
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| CDS CCA 90 bp | ACATCTTGGACACAAGAGGTACTGACGGAGTTTGTTGAGCAGTTCTaGAATGCCAGCCAACCTCTGTGTGGCCCTCTGGAAGTCCCGATA | + |
|
Preference number: 5 (lower is better) Translates to: TSWTQEVLTEFVEQF*NASQPLCGPLEVPI Trigger: TATCGGGACTTCCAGAGGGCCACACAGAGGTTGGCTGGCATTCCAGAACTGCTCAACAAACTCCGTCAGTACCTCTTGTGTCCAAGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
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| CDS-3UTR CAA 90 bp | AATAAATTACAAAACCAGGCAGAAGGCATGGCCCTGGGGAGCCGTCCCAAGGCCCCTTTGTTCCTTAACTaGTCCTGGTCAGAGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NKLQNQAEGMALGSRPKAPLFLN*SWSERC Trigger: ACACCTCTCTGACCAGGACAAGTTAAGGAACAAAGG...GGCCTTGGGACGGCTCCCCAGGGCCATGCCTTCTGCCTGGTTTTGTAATTTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CAA 90 bp | GGTCTCTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTAAGGTGATGCGGGCATaGAGCACATGGAAGAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GLFISTSVSLLAYLQCPGKVMRA*STWKRG Trigger: TCCCCTCTTCCATGTGCTCAATGCCCGCATCACCTT...ACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAGAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CAA 90 bp | GCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAAACTCCTCCTGTTCCCTaGAAGACAACTCCAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLSSVPRSQAQQQTVYKTPPVP*KTTPGP Trigger: TGGCCCTGGAGTTGTCTTCAAGGGAACAGGAGGAGT...TTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CAA 90 bp | GCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAAGTCACCAGCTCCACATaGGTGGCACTGTACACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ASLSSVPRSQAQQQTVYKVTSST*VALYTF Trigger: AAAGGTGTACAGTGCCACCAATGTGGAGCTGGTGAC...TTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CAA 90 bp | CTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAAAGAGGTGTTCTGTTCTaGTGCGTGTCACCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LYFHLSLTASLSSVPRSQRGVLF*CVSPAP Trigger: TGGAGCTGGTGACACGCACAAGAACAGAACACCTCT...TTGGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CAA 90 bp | CTCTTTATTTCCACCTCAGTCTCACTGCTAGCCTATCTTCAGTGCCCAGGTCCCAGCCACAGTGTTGCCTaGAACCTCTGCACTTTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LFISTSVSLLAYLQCPGPSHSVA*NLCTLL Trigger: TAGCAAAGTGCAGAGGTTCAAGGCAACACTGTGGCT...GGGACCTGGGCACTGAAGATAGGCTAGCAGTGAGACTGAGGTGGAAATAAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CAA 90 bp | GCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAATAAAAGGGGAATCTCAATCTaGACAGGGAAGCCTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AYLQCPGPKLSSRQFINKRGISI*TGKPGG Trigger: CCCACCAGGCTTCCCTGTCAAGATTGAGATTCCCCT...TTTATTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
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| CDS-3UTR CAA 90 bp | GCTAGCCTATCTTCAGTGCCCAGGTCCCAAGCTCAGCAGCAGACAGTTTATAAACCCCAGATACCACATTaGTTCCTCTCAAAGGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: ASLSSVPRSQAQQQTVYKPQIPH*FLSKAT Trigger: TGTAGCCTTTGAGAGGAACAAATGTGGTATCTGGGG...TTTATAAACTGTCTGCTGCTGAGCTTGGGACCTGGGCACTGAAGATAGGCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056888.13 |
||
| CDS GCA 72 bp | TGCTTGCGGCTGTGCAGTGCGGCCTCCAGTTCGCGGTaGCGGTTCGCCCAGACTAGCCGGTGCAGCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CLRLCSAASSSR*RFAQTSRCSGK Trigger: CTTCCCGCTGCACCGGCTAGTCTGGGCGAACCGGCACCGCGAACTGGAGGCCGCACTGCACAGCCGCAAGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 ENSMUST00000167215.2 |
||
| CDS GCA 72 bp | GTCCTCCTGCTCAATGTCGTGCTTGCGGCTGTGCAGTaGGGCCTCCAGTTCGCGGTGCCGGTTCGCCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLLLNVVLAAVQ*GLQFAVPVRPD Trigger: GTCTGGGCGAACCGGCACCGCGAACTGGAGGCCGCACTGCACAGCCGCAAGCACGACATTGAGCAGGAGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056888.13 ENSMUST00000163858.8 ENSMUST00000167215.2 |
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| CDS CAA 90 bp | CACCTCACATGGAAAAGGGCTGAAGCAGAAATGGCAGAACTGGAGTaGGGGACGCACACCGAGCTCACAGGCTCATCACAGCCGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: HLTWKRAEAEMAELE*GTHTELTGSSQPQR Trigger: CCTTTGCGGCTGTGATGAGCCTGTGAGCTCGGTGTGCGTCCCCAACTCCAGTTCTGCCATTTCTGCTTCAGCCCTTTTCCATGTGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166031.2 |
||
| CDS CCA 72 bp | GCCAACCTCTGTGTGGCCCTCTGGAAGTCCCGATACTaGAGTACCAACTGTACCATCTCAGGGTCTCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ANLCVALWKSRY*STNCTISGSPV Trigger: CACTGGAGACCCTGAGATGGTACAGTTGGTACTCCAGTATCGGGACTTCCAGAGGGCCACACAGAGGTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056888.13 ENSMUST00000167215.2 |
||
| CDS CCA 72 bp | GTACACCTCTCAAAGGCTACATTGCGAGTGTCCAGGTaGGTGGAGACAATAGGAGAGGTGAGCCGACTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VHLSKATLRVSR*VETIGEVSRLA Trigger: GGCCAGTCGGCTCACCTCTCCTATTGTCTCCACCCACCTGGACACTCGCAATGTAGCCTTTGAGAGGTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
||
| CDS CCA 72 bp | GGGTCCACCTCACATGGAAAAGGGCTGAAGCAGAAATaGCAGAACTGGAGTTGGGGACGCACACCGAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GSTSHGKGLKQK*QNWSWGRTPSS Trigger: TGAGCTCGGTGTGCGTCCCCAACTCCAGTTCTGCCATTTCTGCTTCAGCCCTTTTCCATGTGAGGTGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166031.2 |
||
| CDS CAA 72 bp | TGGAAAAGGGCTGAAGCAGAAATGGCAGAACTGGAGTaGGGGACGCACACCGAGCTCACAGGCTCATCACAG | + |
|
Preference number: 6 (lower is better) Translates to: WKRAEAEMAELE*GTHTELTGSSQ Trigger: CTGTGATGAGCCTGTGAGCTCGGTGTGCGTCCCCAACTCCAGTTCTGCCATTTCTGCTTCAGCCCTTTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166031.2 |
||
| CDS CCA 72 bp | GCTTCCACACACGGTACACATCGCTCGGGCACATCTTaGACACAAGAGGTACTGACGGAGTTTGTTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASTHGTHRSGTS*TQEVLTEFVEQ Trigger: CTGCTCAACAAACTCCGTCAGTACCTCTTGTGTCCAAGATGTGCCCGAGCGATGTGTACCGTGTGTGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
||
| CDS CAA 72 bp | CACATTGGTGGCACTGTACACCTCTCAAAGGCTACATaGCGAGTGTCCAGGTGGGTGGAGACAATAGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: HIGGTVHLSKAT*RVSRWVETIGE Trigger: CTCTCCTATTGTCTCCACCCACCTGGACACTCGCAATGTAGCCTTTGAGAGGTGTACAGTGCCACCAATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170283.2 |
||
| CDS TCA 72 bp | CACATCTTGGACACAAGAGGTACTGACGGAGTTTGTTaGGCAGTTCTGGAATGCCAGCCAACCTCTGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HILDTRGTDGVC*AVLECQPTSVW Trigger: CCACACAGAGGTTGGCTGGCATTCCAGAACTGCTCAACAAACTCCGTCAGTACCTCTTGTGTCCAAGATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167215.2 |
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