Pregenerated sensors for ANKRD13C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039988Ensembl transcript IDs: ENSMUST00000040787.13, ENSMUST00000164582.4, ENSMUST00000199727.5
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTCCATGATGGCCTTGTTCCGCAGGATGTCCTCCTCACTCAGGTaGTCCCTCCTTTTCCTTGATTCTAGAACAAGTCCATTCACCAGA | + |
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Preference number: 1 (lower is better) Translates to: LSMMALFRRMSSSLR*SLLFLDSRTSPFTR Trigger: TCTGGTGAATGGACTTGTTCTAGAATCAAGGAAAAGGAGGGAGCACCTGAGTGAGGAGGACATCCTGCGGAACAAGGCCATCATGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR TCA 90 bp | TTTCCATTTTCAGCGGATATGTATTCTTCCCACGTAATAGTGTTCTaGGGAGGAGGGGTAAGGGACTGTCTTCTAACCGGCTCAAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: FPFSADMYSSHVIVF*GGGVRDCLLTGSKL Trigger: GAGCTTTGAGCCGGTTAGAAGACAGTCCCTTACCCCTCCTCCTCAGAACACTATTACGTGGGAAGAATACATATCCGCTGAAAATGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR GCA 90 bp | TTTCATCACATCACTGATGTGTTGACACTCTGCTTAGAAAAGCTCTaGCTTTGCCACCTGGAGCCTCATGCTCTTCTGGATCAGTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: FHHITDVLTLCLEKL*LCHLEPHALLDQLK Trigger: CTTTAACTGATCCAGAAGAGCATGAGGCTCCAGGTGGCAAAGGCAGAGCTTTTCTAAGCAGAGTGTCAACACATCAGTGATGTGATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR CCA 90 bp | TATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGGGGACTaGAGAGATGGCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: YHYVRCNCKEINIGD*RDGSVVKSTTCSSR Trigger: TCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGCCATCTCTCCAGTCCCCGATATTTATCTCTTTACAGTTGCATCTCACATAGTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR CCA 90 bp | ACTTCTAGAACATTCAACAATGACTCAATTCCCAGGGGAAATTCCTaGCTCATGGCTACAGTGGCTTTAAATGTTTTCTTGCTCTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: TSRTFNNDSIPRGNS*LMATVALNVFLLSL Trigger: CAAAGAGAGCAAGAAAACATTTAAAGCCACTGTAGCCATGAGCCAGGAATTTCCCCTGGGAATTGAGTCATTGTTGAATGTTCTAGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR TCA 90 bp | ACGGGTATATCTAATTTTACAGGAAAGCCTGGAGGAAGCTTCATTTaGACGAATTCTCTAAGCTTGTTAAAGTGCTTGAAGGGTGCTATT | + |
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Preference number: 1 (lower is better) Translates to: TGISNFTGKPGGSFI*TNSLSLLKCLKGAI Trigger: AATAGCACCCTTCAAGCACTTTAACAAGCTTAGAGAATTCGTTCAAATGAAGCTTCCTCCAGGCTTTCCTGTAAAATTAGATATACCCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR CCA 90 bp | TTTCCTACTCTTTCTGTTTTATCTTCCCGAAAAAGCCATCCAGTTTaGGCACGTGTGAAAGAAATGGATTTGGTTGATAAAGTTGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: FPTLSVLSSRKSHPV*ARVKEMDLVDKVAE Trigger: TTCTGCAACTTTATCAACCAAATCCATTTCTTTCACACGTGCCCAAACTGGATGGCTTTTTCGGGAAGATAAAACAGAAAGAGTAGGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR TCA 90 bp | TTTCTGTTTTATCTTCCCGAAAAAGCCATCCAGTTTGGGCACGTGTaGAAGAAATGGATTTGGTTGATAAAGTTGCAGAATAAATATCAC | + |
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Preference number: 1 (lower is better) Translates to: FLFYLPEKAIQFGHV*KKWIWLIKLQNKYH Trigger: GTGATATTTATTCTGCAACTTTATCAACCAAATCCATTTCTTTCACACGTGCCCAAACTGGATGGCTTTTTCGGGAAGATAAAACAGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGTAAGGGACTGTCTTCTAACCGGCTCAAAGCTCTGCTCCGCCAGGCTCCCCTCTGCCTTTGCCACCTaGAGCCTCATGCTCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GVRDCLLTGSKLCSARLPSAFAT*SLMLFW Trigger: CCAGAAGAGCATGAGGCTCCAGGTGGCAAAGGCAGA...GGGGAGCCTGGCGGAGCAGAGCTTTGAGCCGGTTAGAAGACAGTCCCTTACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR GCA 90 bp | GGGGTAAGGGACTGTCTTCTAACCGGCTCAAAGCTCTGCTCCGCCAGGCTCCCCTCCTCCTCACTCAGGTaGTCCCTCCTTTTCCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: GVRDCLLTGSKLCSARLPSSSLR*SLLFLD Trigger: ATCAAGGAAAAGGAGGGAGCACCTGAGTGAGGAGGA...GGGGAGCCTGGCGGAGCAGAGCTTTGAGCCGGTTAGAAGACAGTCCCTTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGTAAGGGACTGTCTTCTAACCGGCTCAAAGCTCTGCTCCGCCAGGCTCCCCAGGTCTCAGGGTCACTaGGTGTCAAACTATTACAGA | + |
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Preference number: 2 (lower is better) Translates to: GVRDCLLTGSKLCSARLPRSQGH*VSNYYR Trigger: TCTGTAATAGTTTGACACCCAGTGACCCTGAGACCT...GGGGAGCCTGGCGGAGCAGAGCTTTGAGCCGGTTAGAAGACAGTCCCTTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGCCCAGGTGTGGTGCCTTTCCATTTTCAGCGGATATGTATTCTTCCCACTGCTCAGGCTCTCCATaGTGGCCTTGTTCCGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SLPRCGAFPFSADMYSSHCSGSP*WPCSAG Trigger: TCCTGCGGAACAAGGCCATCATGGAGAGCCTGAGCA...GTGGGAAGAATACATATCCGCTGAAAATGGAAAGGCACCACACCTGGGCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR CCA 90 bp | GCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGTCTGCCTTTGCCACCTaGAGCCTCATGCTCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: ALPVLPEVLSSIPSNHMVSAFAT*SLMLFW Trigger: CCAGAAGAGCATGAGGCTCCAGGTGGCAAAGGCAGA...CACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
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| 3UTR-3UTR TCA 90 bp | GCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGTCACATCGGAACTCCTaGAAAGTCACAGTGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: ALPVLPEVLSSIPSNHMVSHRNS*KVTVAV Trigger: CACAGCCACTGTGACTTTTCAGGAGTTCCGATGTGA...CACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR GCA 90 bp | GCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGTGCTTAGAAAAGCTCTaGCTTTGCCACCTGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: ALPVLPEVLSSIPSNHMVCLEKL*LCHLEP Trigger: AGGCTCCAGGTGGCAAAGGCAGAGCTTTTCTAAGCA...CACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCATTCTCTGCCCAGGTGTaGTGCCTTTCCATTTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: TCSSRGPEFNSQQPHGGSFSAQV*CLSIFS Trigger: GCTGAAAATGGAAAGGCACCACACCTGGGCAGAGAA...TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR GCA 90 bp | TGCCTTTGCCACCTGGAGCCTCATGCTCTTCTGGATCAGTTAAAGGTCAGGAAATGCTTAGAAAAGCTCTaGCTTTGCCACCTGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: CLCHLEPHALLDQLKVRKCLEKL*LCHLEP Trigger: AGGCTCCAGGTGGCAAAGGCAGAGCTTTTCTAAGCA...TTTCCTGACCTTTAACTGATCCAGAAGAGCATGAGGCTCCAGGTGGCAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCAAAAAGACTCAGAGGGTaGAGCATCCCCATTGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: TCSSRGPEFNSQQPHGGSKRLRG*SIPIED Trigger: ATCTTCAATGGGGATGCTGCACCCTCTGAGTCTTTT...TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR CCA 90 bp | AACAATCCAGTGCAACCATTTTCAGTAGTACAATCCAGTGCAACAATTTTCAGTGCTGCATGGAGGTGCTaGGGGGCACCGCATTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: NNPVQPFSVVQSSATIFSAAWRC*GAPHSL Trigger: CAGGGAATGCGGTGCCCCCCAGCACCTCCATGCAGC...ACTGAAAATTGTTGCACTGGATTGTACTACTGAAAATGGTTGCACTGGATTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR CAA 90 bp | TCCTGGCTCATGGCTACAGTGGCTTTAAATGTTTTCTTGCTCTCTTaGCACACCAGTTCTCTGCCCAGGTGTGGTGCCTTTCCATTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SWLMATVALNVFLLS*HTSSLPRCGAFPFS Trigger: TGAAAATGGAAAGGCACCACACCTGGGCAGAGAACTGGTGTGCAAAGAGAGCAAGAAAACATTTAAAGCCACTGTAGCCATGAGCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR TCA 90 bp | GCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGAAAAAGGATTCAGGTaGAACAAAGAGCACCACGAT | + |
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Preference number: 2 (lower is better) Translates to: ALPVLPEVLSSIPSNHMVEKGFR*NKEHHD Trigger: ATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTC...CACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGCCCAGGTGTGGTGCCTTTCCATTTTCAGCGGATATGTATTCTTCCCACTTCTGTTTCCATCTCTaGCTCCTCATGGTGTATTCG | + |
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Preference number: 2 (lower is better) Translates to: SLPRCGAFPFSADMYSSHFCFHL*LLMVYS Trigger: CGAATACACCATGAGGAGTCAGAGATGGAAACAGAA...GTGGGAAGAATACATATCCGCTGAAAATGGAAAGGCACCACACCTGGGCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR CCA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGGTCTCAGGGTCACTaGGTGTCAAACTATTACAGA | + |
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Preference number: 2 (lower is better) Translates to: AQWLRALPVLPEVLSSIPRSQGH*VSNYYR Trigger: TCTGTAATAGTTTGACACCCAGTGACCCTGAGACCT...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR-3UTR TCA 90 bp | GCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGTTTTCATCACATCACTaGTGTGTTGACACTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: ALPVLPEVLSSIPSNHMVFSSHH*CVDTLL Trigger: AAGCAGAGTGTCAACACATCAGTGATGTGATGAAAA...CACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCAACTGATGGTTACCATTaGTCTGTTCACCTCAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: TCSSRGPEFNSQQPHGGSTDGYH*SVHLRK Trigger: TTTTCTGAGGTGAACAGAGCAATGGTAACCATCAGT...TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
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| 3UTR-3UTR CCA 90 bp | ACACCAGTTCTCTGCCCAGGTGTGGTGCCTTTCCATTTTCAGCGGATATGTATTCTTAGATCCCCTCGTTaGCACTTCATGTCAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: TPVLCPGVVPFHFQRICILRSPR*HFMSVK Trigger: CTTTACTGACATGAAGTGCCAACGAGGGGATCTAAG...AATACATATCCGCTGAAAATGGAAAGGCACCACACCTGGGCAGAGAACTGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAAAAAAGCCATCCAGTTTaGGCACGTGTGAAAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: TALTAALHRKVSGSLGVKKSHPV*ARVKEM Trigger: CATTTCTTTCACACGTGCCCAAACTGGATGGCTTTT...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR TCA 90 bp | CAGTTAAAGGTCAGGAAAACGACTTGGGTCTTCCTTGTAGTCTTCAGGGATAGCCAGTTTGGGCACGTGTaGAAGAAATGGATTTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: QLKVRKTTWVFLVVFRDSQFGHV*KKWIWL Trigger: CAACCAAATCCATTTCTTTCACACGTGCCCAAACTG...GCTATCCCTGAAGACTACAAGGAAGACCCAAGTCGTTTTCCTGACCTTTAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR CCA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAATTTTACAGGAAAGCCTaGAGGAAGCTTCATTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: TALTAALHRKVSGSLGVKFYRKA*RKLHLN Trigger: GTTCAAATGAAGCTTCCTCCAGGCTTTCCTGTAAAA...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGATGGCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCGTGACTTTAAAAAGATaGATGAATGGCACATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RDGSVVKSTTCSSRGPEFVTLKR*MNGTSG Trigger: TCCTGATGTGCCATTCATTCATCTTTTTAAAGTCAC...GAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGCCATCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGCCCAGGTGTGGTGCCTTTCCATTTTCAGCGGATATGTATTCTTCCCACGTGACTTTAAAAAGATaGATGAATGGCACATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SLPRCGAFPFSADMYSSHVTLKR*MNGTSG Trigger: TCCTGATGTGCCATTCATTCATCTTTTTAAAGTCAC...GTGGGAAGAATACATATCCGCTGAAAATGGAAAGGCACCACACCTGGGCAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCACAAACAGTTTCCACTaGAAAAGGATTCAGGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: AQWLRALPVLPEVLSSIPTNSFH*KRIQVK Trigger: TTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGT...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR-3UTR GCA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAATTCACCTCAGAAAACTaGATTCCTTCTAGTTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: TALTAALHRKVSGSLGVKFTSEN*IPSSWL Trigger: TAACCAACTAGAAGGAATGCAGTTTTCTGAGGTGAA...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
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| 3UTR-3UTR GCA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCCATTGCAGCTATAAATaGAACTGTTATCAAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: AQWLRALPVLPEVLSSIPHCSYK*NCYQGA Trigger: AGCACCTTGATAACAGTTGCATTTATAGCTGCAATG...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR-3UTR CCA 90 bp | AACAATCCAGTGCAACCATTTTCAGTAGTACAATCCAGTGCAACAATTTTCAGTTTCCCAGCAACCACATaGTGGCTCACAACCACCTGT | + |
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Preference number: 2 (lower is better) Translates to: NNPVQPFSVVQSSATIFSFPATT*WLTTTC Trigger: ACAGGTGGTTGTGAGCCACCATGTGGTTGCTGGGAA...ACTGAAAATTGTTGCACTGGATTGTACTACTGAAAATGGTTGCACTGGATTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR-3UTR GCA 90 bp | CAGTTAAAGGTCAGGAAAACGACTTGGGTCTTCCTTGTAGTCTTCAGGGATAGCCTAAGCTTGTTAAAGTaGTTGAAGGGTGCTATTACT | + |
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Preference number: 2 (lower is better) Translates to: QLKVRKTTWVFLVVFRDSLSLLK*LKGAIT Trigger: AGTAATAGCACCCTTCAAGCACTTTAACAAGCTTAG...GCTATCCCTGAAGACTACAAGGAAGACCCAAGTCGTTTTCCTGACCTTTAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR TCA 90 bp | AACAAACAGTTTCCACTGAAAAAGGATTCAGGTGAAACAAAGAGCACCACGATGACAAACAGTTTCCACTaGAAAAGGATTCAGGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: NKQFPLKKDSGETKSTTMTNSFH*KRIQVK Trigger: TTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGT...CATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
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| 3UTR-3UTR TCA 90 bp | AACAATCCAGTGCAACCATTTTCAGTAGTACAATCCAGTGCAACAATTTTCAGTCTGACAAATGTATCTTaGCACATCTCATCAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: NNPVQPFSVVQSSATIFSLTNVS*HISSGH Trigger: GTGTCCTGATGAGATGTGTCAAGATACATTTGTCAG...ACTGAAAATTGTTGCACTGGATTGTACTACTGAAAATGGTTGCACTGGATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR-3UTR GCA 90 bp | ACATATGCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCAGCACTCCCTTGGAATaGATTGCAGCTATAAATGCA | + |
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Preference number: 2 (lower is better) Translates to: TYARWYHYVRCNCKEINISTPLE*IAAINA Trigger: TGCATTTATAGCTGCAATGCATTCCAAGGGAGTGCT...GATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGCATATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR-3UTR TCA 90 bp | ACATATGCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCTTTTCATCACATCACTaGTGTGTTGACACTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: TYARWYHYVRCNCKEINIFSSHH*CVDTLL Trigger: AAGCAGAGTGTCAACACATCAGTGATGTGATGAAAA...GATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGCATATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR-3UTR TCA 90 bp | AACAATCCAGTGCAACCATTTTCAGTAGTACAATCCAGTGCAACAATTTTCAGTCACACTGTAACAACCTaGCAAATGTATCTTGACACA | + |
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Preference number: 2 (lower is better) Translates to: NNPVQPFSVVQSSATIFSHTVTT*QMYLDT Trigger: TGTGTCAAGATACATTTGTCAGGTTGTTACAGTGTG...ACTGAAAATTGTTGCACTGGATTGTACTACTGAAAATGGTTGCACTGGATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR-3UTR GCA 90 bp | AACAATCCAGTGCAACCATTTTCAGTAGTACAATCCAGTGCAACAATTTTCAGTTCCCTTGGAATGCATTaGAGCTATAAATGCAACTGT | + |
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Preference number: 2 (lower is better) Translates to: NNPVQPFSVVQSSATIFSSLGMH*SYKCNC Trigger: ACAGTTGCATTTATAGCTGCAATGCATTCCAAGGGA...ACTGAAAATTGTTGCACTGGATTGTACTACTGAAAATGGTTGCACTGGATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| 3UTR-3UTR CAA 90 bp | GGGGTAAGGGACTGTCTTCTAACCGGCTCAAAGCTCTGCTCCGCCAGGCTCCCCGCTCCCTCCTTTTCCTaGATTCTAGAACAAGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: GVRDCLLTGSKLCSARLPAPSFS*ILEQVH Trigger: ATGGACTTGTTCTAGAATCAAGGAAAAGGAGGGAGC...GGGGAGCCTGGCGGAGCAGAGCTTTGAGCCGGTTAGAAGACAGTCCCTTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR-3UTR CAA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAAAGAAAAGCTCTGCCTTaGCCACCTGGAGCCTCATGC | + |
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Preference number: 3 (lower is better) Translates to: TALTAALHRKVSGSLGVKRKALP*PPGASC Trigger: GCATGAGGCTCCAGGTGGCAAAGGCAGAGCTTTTCT...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGCCCAGGTGTGGTGCCTTTCCATTTTCAGCGGATATGTATTCTTCCCACAGAAAAGCTCTGCCTTaGCCACCTGGAGCCTCATGC | + |
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Preference number: 3 (lower is better) Translates to: SLPRCGAFPFSADMYSSHRKALP*PPGASC Trigger: GCATGAGGCTCCAGGTGGCAAAGGCAGAGCTTTTCT...GTGGGAAGAATACATATCCGCTGAAAATGGAAAGGCACCACACCTGGGCAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| 3UTR GCA 72 bp | GGCACCGCATTCCCTGCAGGGAGCACTCCCTTGGAATaGATTGCAGCTATAAATGCAACTGTTATCAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GTAFPAGSTPLE*IAAINATVIKV Trigger: CACCTTGATAACAGTTGCATTTATAGCTGCAATGCATTCCAAGGGAGTGCTCCCTGCAGGGAATGCGGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| 3UTR GCA 72 bp | ATGGCCTTGTTCCGCAGGATGTCCTCCTCACTCAGGTaGTCCCTCCTTTTCCTTGATTCTAGAACAAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: MALFRRMSSSLR*SLLFLDSRTSP Trigger: TGGACTTGTTCTAGAATCAAGGAAAAGGAGGGAGCACCTGAGTGAGGAGGACATCCTGCGGAACAAGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGAACATTCAACAATGACTCAATTCCCAGGGGAAATTCCTGGCTCATGGCTCTCTCCATGATGGCCTaGTTCCGCAGGATGTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SRTFNNDSIPRGNSWLMALSMMA*FRRMSS Trigger: GGAGGACATCCTGCGGAACAAGGCCATCATGGAGAG...AGCCATGAGCCAGGAATTTCCCCTGGGAATTGAGTCATTGTTGAATGTTCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| 3UTR TCA 72 bp | TCAGCGGATATGTATTCTTCCCACGTAATAGTGTTCTaGGGAGGAGGGGTAAGGGACTGTCTTCTAACCGGC | + |
|
Preference number: 3 (lower is better) Translates to: SADMYSSHVIVF*GGGVRDCLLTG Trigger: GCCGGTTAGAAGACAGTCCCTTACCCCTCCTCCTCAGAACACTATTACGTGGGAAGAATACATATCCGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| 3UTR GCA 72 bp | ATCACTGATGTGTTGACACTCTGCTTAGAAAAGCTCTaGCTTTGCCACCTGGAGCCTCATGCTCTTCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: ITDVLTLCLEKL*LCHLEPHALLD Trigger: ATCCAGAAGAGCATGAGGCTCCAGGTGGCAAAGGCAGAGCTTTTCTAAGCAGAGTGTCAACACATCAGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| 3UTR GCA 72 bp | CTTAGAAAAGCTCTGCCTTTGCCACCTGGAGCCTCATaGTCTTCTGGATCAGTTAAAGGTCAGGAAAACGAC | + |
|
Preference number: 3 (lower is better) Translates to: LRKALPLPPGAS*SSGSVKGQEND Trigger: GTCGTTTTCCTGACCTTTAACTGATCCAGAAGAGCATGAGGCTCCAGGTGGCAAAGGCAGAGCTTTTCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| 3UTR-3UTR CAA 90 bp | GACTGGAGAGATGGCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTCACATCACTGATGTGTaGACACTCTGCTTAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: DWRDGSVVKSTTCSSRGPHITDV*TLCLEK Trigger: CTTTTCTAAGCAGAGTGTCAACACATCAGTGATGTG...AGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGCCATCTCTCCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTTTGCCACCTGGAGCCTCATGCTCTTCTGGATCAGTTAAAGGTCAGGAAACACATCACTGATGTGTaGACACTCTGCTTAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: CLCHLEPHALLDQLKVRKHITDV*TLCLEK Trigger: CTTTTCTAAGCAGAGTGTCAACACATCAGTGATGTG...TTTCCTGACCTTTAACTGATCCAGAAGAGCATGAGGCTCCAGGTGGCAAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| 3UTR-3UTR CAA 90 bp | ACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCAACGAATTCTCTAAGCTaGTTAAAGTGCTTGAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TCSSRGPEFNSQQPHGGSTNSLS*LKCLKG Trigger: ACCCTTCAAGCACTTTAACAAGCTTAGAGAATTCGT...TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| 3UTR CCA 72 bp | GTGAGATGCAACTGTAAAGAGATAAATATCGGGGACTaGAGAGATGGCTCAGTGGTTAAGAGCACTACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VRCNCKEINIGD*RDGSVVKSTTC Trigger: ACAGGTAGTGCTCTTAACCACTGAGCCATCTCTCCAGTCCCCGATATTTATCTCTTTACAGTTGCATCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| 3UTR TCA 72 bp | AAGATGGATCCATCAAATTCATCACATCGGAACTCCTaGAAAGTCACAGTGGCTGTGATTGTGGGAAACACG | + |
|
Preference number: 3 (lower is better) Translates to: KMDPSNSSHRNS*KVTVAVIVGNT Trigger: CGTGTTTCCCACAATCACAGCCACTGTGACTTTTCAGGAGTTCCGATGTGATGAATTTGATGGATCCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGGGGACTTCCCTCGGAATGTATaGCAACAGGCTGTAAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: ARWYHYVRCNCKEINIGDFPRNV*QQAVNE Trigger: TTCATTTACAGCCTGTTGCAATACATTCCGAGGGAA...GTCCCCGATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGGGGACCCTGACAAATGTATCTaGACACATCTCATCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: ARWYHYVRCNCKEINIGDPDKCI*THLIRT Trigger: TGTCCTGATGAGATGTGTCAAGATACATTTGTCAGG...GTCCCCGATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| 3UTR CCA 72 bp | ACATTCAACAATGACTCAATTCCCAGGGGAAATTCCTaGCTCATGGCTACAGTGGCTTTAAATGTTTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TFNNDSIPRGNS*LMATVALNVFL Trigger: CAAGAAAACATTTAAAGCCACTGTAGCCATGAGCCAGGAATTTCCCCTGGGAATTGAGTCATTGTTGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| 3UTR-3UTR CAA 90 bp | AACAAACAGTTTCCACTGAAAAAGGATTCAGGTGAAACAAAGAGCACCACGATGCCTGACAAATGTATCTaGACACATCTCATCAGGACA | + |
|
Preference number: 3 (lower is better) Translates to: NKQFPLKKDSGETKSTTMPDKCI*THLIRT Trigger: TGTCCTGATGAGATGTGTCAAGATACATTTGTCAGG...CATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| 3UTR-3UTR CAA 90 bp | AACAAACAGTTTCCACTGAAAAAGGATTCAGGTGAAACAAAGAGCACCACGATGAGCTTGTTAAAGTGCTaGAAGGGTGCTATTACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NKQFPLKKDSGETKSTTMSLLKC*KGAITS Trigger: AGAAGTAATAGCACCCTTCAAGCACTTTAACAAGCT...CATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| 3UTR CCA 72 bp | CTTTCTGTTTTATCTTCCCGAAAAAGCCATCCAGTTTaGGCACGTGTGAAAGAAATGGATTTGGTTGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSVLSSRKSHPV*ARVKEMDLVDK Trigger: TTTATCAACCAAATCCATTTCTTTCACACGTGCCCAAACTGGATGGCTTTTTCGGGAAGATAAAACAGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| 3UTR TCA 72 bp | AAACAAAGCTTAAAGGAACATTTATACATGCCACCCTaGATAGAGGTGACGCATTTCAAAGGGTTTCATATC | + |
|
Preference number: 3 (lower is better) Translates to: KQSLKEHLYMPP*IEVTHFKGFHI Trigger: GATATGAAACCCTTTGAAATGCGTCACCTCTATTCAGGGTGGCATGTATAAATGTTCCTTTAAGCTTTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| 3UTR TCA 72 bp | TCTAATTTTACAGGAAAGCCTGGAGGAAGCTTCATTTaGACGAATTCTCTAAGCTTGTTAAAGTGCTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SNFTGKPGGSFI*TNSLSLLKCLK Trigger: CTTCAAGCACTTTAACAAGCTTAGAGAATTCGTTCAAATGAAGCTTCCTCCAGGCTTTCCTGTAAAATTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| CDS-3UTR GCA 90 bp | GGGGTAAGGGACTGTCTTCTAACCGGCTCAAAGCTCTGCTCCGCCAGGCTCCCCGCGGGCGCCTTCAGCTaGAGCCGGTGGTGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVRDCLLTGSKLCSARLPAGAFS*SRWWWL Trigger: CAGCCACCACCACCGGCTGCAGCTGAAGGCGCCCGC...GGGGAGCCTGGCGGAGCAGAGCTTTGAGCCGGTTAGAAGACAGTCCCTTACCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| CDS-3UTR CCA 90 bp | CCTTTGCTCAGGCTCTCCATGATGGCCTTGTTCCGCAGGATGTCCTCCTCACTCTCTTTGCTGGGCTTGTaGTCCCTCCGCAGGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLRLSMMALFRRMSSSLSLLGL*SLRRER Trigger: CCGCTCCCTGCGGAGGGACCACAAGCCCAGCAAAGA...GAGTGAGGAGGACATCCTGCGGAACAAGGCCATCATGGAGAGCCTGAGCAAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| CDS-3UTR GCA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCGCGGGCGCCTTCAGCTaGAGCCGGTGGTGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALPVLPEVLSSIPAGAFS*SRWWWL Trigger: CAGCCACCACCACCGGCTGCAGCTGAAGGCGCCCGC...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CCA 90 bp | GCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGCCCCGTCCTCTTTGCTaGGCTTGTGGTCCCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPVLPEVLSSIPSNHMVPRPLC*ACGPSA Trigger: TGCGGAGGGACCACAAGCCCAGCAAAGAGGACGGGG...CACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR GCA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAACGTCCCCGTCCTCTTTaGTGGGCTTGTGGTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TALTAALHRKVSGSLGVKRPRPL*WACGPS Trigger: GGAGGGACCACAAGCCCAGCAAAGAGGACGGGGACG...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCCCCCGTCCTCTTTGCTaGGCTTGTGGTCCCTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALPVLPEVLSSIPPRPLC*ACGPSA Trigger: TGCGGAGGGACCACAAGCCCAGCAAAGAGGACGGGG...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR TCA 90 bp | TCTCTGCCCAGGTGTGGTGCCTTTCCATTTTCAGCGGATATGTATTCTTCCCACGCCGGTGGTGGTGGCTaGAGATCTTATGGCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPRCGAFPFSADMYSSHAGGGG*RSYGRP Trigger: AGGCCTGCCATAAGATCTTCAGCCACCACCACCGGC...GTGGGAAGAATACATATCCGCTGAAAATGGAAAGGCACCACACCTGGGCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| CDS-3UTR TCA 90 bp | AGAGATGGCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCGTCTGTCTCCATAGCTaGTGGCTTCCGCAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RDGSVVKSTTCSSRGPEFVCLHS*WLPQEG Trigger: GCCCTCTTGCGGAAGCCATCAGCTATGGAGACAGAC...GAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGCCATCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR GCA 90 bp | CAGTTAAAGGTCAGGAAAACGACTTGGGTCTTCCTTGTAGTCTTCAGGGATAGCCGTCCCCGTCCTCTTTaGTGGGCTTGTGGTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLKVRKTTWVFLVVFRDSRPRPL*WACGPS Trigger: GGAGGGACCACAAGCCCAGCAAAGAGGACGGGGACG...GCTATCCCTGAAGACTACAAGGAAGACCCAAGTCGTTTTCCTGACCTTTAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| CDS-3UTR GCA 90 bp | GACTGGAGAGATGGCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTTGCACACCAGTTCTCTaGCCAGGTGTGGTGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DWRDGSVVKSTTCSSRGPCTPVL*PGVVPF Trigger: GAAAGGCACCACACCTGGGCAGAGAACTGGTGTGCA...AGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGCCATCTCTCCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR TCA 90 bp | ACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACACGTAATAGTGTTCTaGGGAGGAGGGGTAAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TCSSRGPEFNSQQPHGGSHVIVF*GGGVRD Trigger: GTCCCTTACCCCTCCTCCTCAGAACACTATTACGTG...TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR GCA 90 bp | ACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCATCTGCCCAGGTGTGGTaGCTTTCCATTTTCAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCSSRGPEFNSQQPHGGSSAQVW*LSIFSG Trigger: TCCGCTGAAAATGGAAAGGCACCACACCTGGGCAGA...TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCTGCAGCCGGTGGTGGTaGCTGAAGATCTTATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALPVLPEVLSSIPCSRWW*LKILWQ Trigger: CTGCCATAAGATCTTCAGCCACCACCACCGGCTGCA...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CCA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAAAGCTGCAGCCGGTGGTaGTGGCTGAAGATCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: TALTAALHRKVSGSLGVKSCSRW*WLKILW Trigger: CCATAAGATCTTCAGCCACCACCACCGGCTGCAGCT...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR GCA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCTTCTGTCCGATATTGTaGGTGCGGATGAGCGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALPVLPEVLSSIPFCPIL*VRMSED Trigger: GTCCTCGCTCATCCGCACGCACAATATCGGACAGAA...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR GCA 90 bp | ACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCATCCTCCTCACTCAGGTaGTCCCTCCTTTTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TCSSRGPEFNSQQPHGGSSSSLR*SLLFLD Trigger: ATCAAGGAAAAGGAGGGAGCACCTGAGTGAGGAGGA...TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CCA 90 bp | TTTATCTTCCCGAAAAAGCCATCCAGTTTGGGCACGTGTGAAAGAAATGGATTTCCGGGGCAGGGCAGGTaGCAGTCACTGCGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIFPKKPSSLGTCERNGFPGQGR*QSLRCA Trigger: AGCACAACGCAGTGACTGCCACCTGCCCTGCCCCGG...AAATCCATTTCTTTCACACGTGCCCAAACTGGATGGCTTTTTCGGGAAGATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| CDS-3UTR TCA 90 bp | CAGTTAAAGGTCAGGAAAACGACTTGGGTCTTCCTTGTAGTCTTCAGGGATAGCTATTGTGCGTGCGGATaGGCGAGGACAGTCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QLKVRKTTWVFLVVFRDSYCACG*ARTVSS Trigger: TGAGGAGACTGTCCTCGCTCATCCGCACGCACAATA...GCTATCCCTGAAGACTACAAGGAAGACCCAAGTCGTTTTCCTGACCTTTAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| CDS-3UTR TCA 90 bp | GCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGGGGACTGCTCAGGCTCTCCATaGTGGCCTTGTTCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARWYHYVRCNCKEINIGDCSGSP*WPCSAG Trigger: TCCTGCGGAACAAGGCCATCATGGAGAGCCTGAGCA...GTCCCCGATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CCA 90 bp | AACAAACAGTTTCCACTGAAAAAGGATTCAGGTGAAACAAAGAGCACCACGATGTCTTTGCTGGGCTTGTaGTCCCTCCGCAGGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NKQFPLKKDSGETKSTTMSLLGL*SLRRER Trigger: CCGCTCCCTGCGGAGGGACCACAAGCCCAGCAAAGA...CATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR CCA 90 bp | TATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGGGGACTGGAGAGATCCGGGGCAGGGCAGGTaGCAGTCACTGCGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YHYVRCNCKEINIGDWRDPGQGR*QSLRCA Trigger: AGCACAACGCAGTGACTGCCACCTGCCCTGCCCCGG...ATCTCTCCAGTCCCCGATATTTATCTCTTTACAGTTGCATCTCACATAGTGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CCA 90 bp | TCTAGAACATTCAACAATGACTCAATTCCCAGGGGAAATTCCTGGCTCATGGCTTGCAGCCGGTGGTGGTaGCTGAAGATCTTATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTFNNDSIPRGNSWLMACSRWW*LKILWQ Trigger: CTGCCATAAGATCTTCAGCCACCACCACCGGCTGCA...AGCCATGAGCCAGGAATTTCCCCTGGGAATTGAGTCATTGTTGAATGTTCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| CDS-3UTR CCA 90 bp | GCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGGGGACAGCTGCAGCCGGTGGTaGTGGCTGAAGATCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: ARWYHYVRCNCKEINIGDSCSRW*WLKILW Trigger: CCATAAGATCTTCAGCCACCACCACCGGCTGCAGCT...GTCCCCGATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| 3UTR CAA 72 bp | CCACATTCCCTGCAGGGAGCGTTCCCTCGGAATGTATaGCAACAGGCTGTAAATGAAACTGATGGTTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PHSLQGAFPRNV*QQAVNETDGYH Trigger: ATGGTAACCATCAGTTTCATTTACAGCCTGTTGCAATACATTCCGAGGGAACGCTCCCTGCAGGGAATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR TCA 90 bp | AACAAACAGTTTCCACTGAAAAAGGATTCAGGTGAAACAAAGAGCACCACGATGGTCTGTCTCCATAGCTaGTGGCTTCCGCAAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NKQFPLKKDSGETKSTTMVCLHS*WLPQEG Trigger: GCCCTCTTGCGGAAGCCATCAGCTATGGAGACAGAC...CATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR TCA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAATCCTTAGAAGAGCTGTaGTCATCTGTCTGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TALTAALHRKVSGSLGVKSLEEL*SSVCLH Trigger: ATGGAGACAGACAGATGATCACAGCTCTTCTAAGGA...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR TCA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAACAGTTTGGGCACGTGTaGAAGAAATGGATTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TALTAALHRKVSGSLGVKQFGHV*KKWIWL Trigger: CAACCAAATCCATTTCTTTCACACGTGCCCAAACTG...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR GCA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAAAAAAGACTCAGAGGGTaGAGCATCCCCATTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TALTAALHRKVSGSLGVKKRLRG*SIPIED Trigger: ATCTTCAATGGGGATGCTGCACCCTCTGAGTCTTTT...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CCA 90 bp | AGAGATGGCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCCTTAGATCCCCTCGTTaGCACTTCATGTCAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDGSVVKSTTCSSRGPEFLRSPR*HFMSVK Trigger: CTTTACTGACATGAAGTGCCAACGAGGGGATCTAAG...GAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGCCATCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CCA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCGTCAGGAAAACGACTTaGGTCTTCCTTGTAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALPVLPEVLSSIPVRKTT*VFLVVF Trigger: GAAGACTACAAGGAAGACCCAAGTCGTTTTCCTGAC...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR TCA 90 bp | ACATATGCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGCCGGTGGTGGTGGCTaGAGATCTTATGGCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TYARWYHYVRCNCKEINIAGGGG*RSYGRP Trigger: AGGCCTGCCATAAGATCTTCAGCCACCACCACCGGC...GATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGCATATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR TCA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAATTTACTGGAGCATTATaGGCCAACAGTAAATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TALTAALHRKVSGSLGVKFTGAL*ANSKCA Trigger: CGCACATTTACTGTTGGCTCATAATGCTCCAGTAAA...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR TCA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCGGAGGAAGCTTCATTTaGACGAATTCTCTAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALPVLPEVLSSIPGGSFI*TNSLSL Trigger: CAAGCTTAGAGAATTCGTTCAAATGAAGCTTCCTCC...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR GCA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCACACTCTCCCTAGATTaGTGCTTGAGTTTCCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AQWLRALPVLPEVLSSIPTLSLD*CLSFLR Trigger: TCTAAGGAAACTCAAGCAGCAATCTAGGGAGAGTGT...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR GCA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAAACACTCTCCCTAGATTaGTGCTTGAGTTTCCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TALTAALHRKVSGSLGVKTLSLD*CLSFLR Trigger: TCTAAGGAAACTCAAGCAGCAATCTAGGGAGAGTGT...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR GCA 90 bp | CACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAACTATTTTTCTTGCTCTCTTTaGACACCAGTTCTCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSQLLYIGRSQGHWVSNYFSCSL*TPVLCP Trigger: TGGGCAGAGAACTGGTGTGCAAAGAGAGCAAGAAAA...ATAGTTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CCA 90 bp | AACAAACAGTTTCCACTGAAAAAGGATTCAGGTGAAACAAAGAGCACCACGATGTGGCTGAAGATCTTATaGCAGGCCTTGCCGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKQFPLKKDSGETKSTTMWLKIL*QALPPL Trigger: CAAGGGCGGCAAGGCCTGCCATAAGATCTTCAGCCA...CATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| 3UTR CAA 72 bp | ATGGCTACAGTGGCTTTAAATGTTTTCTTGCTCTCTTaGCACACCAGTTCTCTGCCCAGGTGTGGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MATVALNVFLLS*HTSSLPRCGAF Trigger: AAAGGCACCACACCTGGGCAGAGAACTGGTGTGCAAAGAGAGCAAGAAAACATTTAAAGCCACTGTAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| CDS-3UTR TCA 90 bp | ACATATGCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCTATTGTGCGTGCGGATaGGCGAGGACAGTCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TYARWYHYVRCNCKEINIYCACG*ARTVSS Trigger: TGAGGAGACTGTCCTCGCTCATCCGCACGCACAATA...GATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGCATATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR TCA 90 bp | AGAGATGGCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAAAGGAGTGTTTCCATaGTTATCTTTCTGTCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: RDGSVVKSTTCSSRGPEFKGVFP*LSFCPI Trigger: TATCGGACAGAAAGATAATCATGGAAACACTCCTTT...GAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGCCATCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR TCA 90 bp | AACAAACAGTTTCCACTGAAAAAGGATTCAGGTGAAACAAAGAGCACCACGATGTCACATCGGAACTCCTaGAAAGTCACAGTGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NKQFPLKKDSGETKSTTMSHRNS*KVTVAV Trigger: CACAGCCACTGTGACTTTTCAGGAGTTCCGATGTGA...CATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR TCA 90 bp | GCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGGGGACTTTACTGGAGCATTATaGGCCAACAGTAAATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ARWYHYVRCNCKEINIGDFTGAL*ANSKCA Trigger: CGCACATTTACTGTTGGCTCATAATGCTCCAGTAAA...GTCCCCGATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| CDS-3UTR TCA 90 bp | TATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGGGGACTGGAGAGATTTCTGTTTCCATCTCTaGCTCCTCATGGTGTATTCG | + |
|
Preference number: 4 (lower is better) Translates to: YHYVRCNCKEINIGDWRDFCFHL*LLMVYS Trigger: CGAATACACCATGAGGAGTCAGAGATGGAAACAGAA...ATCTCTCCAGTCCCCGATATTTATCTCTTTACAGTTGCATCTCACATAGTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR TCA 90 bp | ACATATGCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCTCCTTAGAAGAGCTGTaGTCATCTGTCTGTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TYARWYHYVRCNCKEINISLEEL*SSVCLH Trigger: ATGGAGACAGACAGATGATCACAGCTCTTCTAAGGA...GATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGCATATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| CDS-3UTR CCA 90 bp | GTGTGGTGCCTTTCCATTTTCAGCGGATATGTATTCTTCCCACGTAATAGTGTTATTTTTCACCTTTACTaGAGCATTATGAGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VWCLSIFSGYVFFPRNSVIFHLY*SIMSQQ Trigger: CTGTTGGCTCATAATGCTCCAGTAAAGGTGAAAAAT...AACACTATTACGTGGGAAGAATACATATCCGCTGAAAATGGAAAGGCACCACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
||
| CDS-3UTR CCA 90 bp | AACAAACAGTTTCCACTGAAAAAGGATTCAGGTGAAACAAAGAGCACCACGATGTTTTACAGGAAAGCCTaGAGGAAGCTTCATTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NKQFPLKKDSGETKSTTMFYRKA*RKLHLN Trigger: GTTCAAATGAAGCTTCCTCCAGGCTTTCCTGTAAAA...CATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CCA 90 bp | ACATATGCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCAAAAGCCATCCAGTTTaGGCACGTGTGAAAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: TYARWYHYVRCNCKEINIKSHPV*ARVKEM Trigger: CATTTCTTTCACACGTGCCCAAACTGGATGGCTTTT...GATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGCATATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| CDS-3UTR GCA 90 bp | AACAATCCAGTGCAACCATTTTCAGTAGTACAATCCAGTGCAACAATTTTCAGTCTAAGCTTGTTAAAGTaGTTGAAGGGTGCTATTACT | + |
|
Preference number: 4 (lower is better) Translates to: NNPVQPFSVVQSSATIFSLSLLK*LKGAIT Trigger: AGTAATAGCACCCTTCAAGCACTTTAACAAGCTTAG...ACTGAAAATTGTTGCACTGGATTGTACTACTGAAAATGGTTGCACTGGATTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CCA 90 bp | ACATATGCCAGGTGGTATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCATTTTTCACCTTTACTaGAGCATTATGAGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: TYARWYHYVRCNCKEINIIFHLY*SIMSQQ Trigger: CTGTTGGCTCATAATGCTCCAGTAAAGGTGAAAAAT...GATATTTATCTCTTTACAGTTGCATCTCACATAGTGATACCACCTGGCATATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS TCA 90 bp | GGCCCGGAACGGCGGGCGCCTTCAGCTGCAGCCGGTGGTGGTGGCTaGAGATCTTATGGCAGGCCTTGCCGCCCTTGCCGCTGCCGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GPERRAPSAAAGGGG*RSYGRPCRPCRCRP Trigger: CGGGCGGCAGCGGCAAGGGCGGCAAGGCCTGCCATAAGATCTTCAGCCACCACCACCGGCTGCAGCTGAAGGCGCCCGCCGTTCCGGGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CCA 90 bp | CCGGGGCCCGGAACGGCGGGCGCCTTCAGCTGCAGCCGGTGGTGGTaGCTGAAGATCTTATGGCAGGCCTTGCCGCCCTTGCCGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PGPGTAGAFSCSRWW*LKILWQALPPLPLP Trigger: CGGCAGCGGCAAGGGCGGCAAGGCCTGCCATAAGATCTTCAGCCACCACCACCGGCTGCAGCTGAAGGCGCCCGCCGTTCCGGGCCCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CCA 90 bp | ACGCCGGGGCCCGGAACGGCGGGCGCCTTCAGCTGCAGCCGGTGGTaGTGGCTGAAGATCTTATGGCAGGCCTTGCCGCCCTTGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPGPGTAGAFSCSRW*WLKILWQALPPLPL Trigger: CAGCGGCAAGGGCGGCAAGGCCTGCCATAAGATCTTCAGCCACCACCACCGGCTGCAGCTGAAGGCGCCCGCCGTTCCGGGCCCCGGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CCA 90 bp | GCGGGCGCCTTCAGCTGCAGCCGGTGGTGGTGGCTGAAGATCTTATaGCAGGCCTTGCCGCCCTTGCCGCTGCCGCCCGGTCCGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGAFSCSRWWWLKIL*QALPPLPLPPGPLL Trigger: CAGAAGCGGACCGGGCGGCAGCGGCAAGGGCGGCAAGGCCTGCCATAAGATCTTCAGCCACCACCACCGGCTGCAGCTGAAGGCGCCCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS GCA 90 bp | CTGTCGCCTCCTCCTCGCAGGGCTCCAGCACGTCCCCGTCCTCTTTaGTGGGCTTGTGGTCCCTCCGCAGGGAGCGGATCTTCTCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPPPRRAPARPRPL*WACGPSAGSGSSPR Trigger: CCGGGGAGAAGATCCGCTCCCTGCGGAGGGACCACAAGCCCAGCAAAGAGGACGGGGACGTGCTGGAGCCCTGCGAGGAGGAGGCGACAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CCA 90 bp | TCGCCTCCTCCTCGCAGGGCTCCAGCACGTCCCCGTCCTCTTTGCTaGGCTTGTGGTCCCTCCGCAGGGAGCGGATCTTCTCCCCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPPPRRAPARPRPLC*ACGPSAGSGSSPRS Trigger: TGACCGGGGAGAAGATCCGCTCCCTGCGGAGGGACCACAAGCCCAGCAAAGAGGACGGGGACGTGCTGGAGCCCTGCGAGGAGGAGGCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS-3UTR CAA 90 bp | GACTGGAGAGATGGCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTTCCTCTTTGCTGGGCTaGTGGTCCCTCCGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DWRDGSVVKSTTCSSRGPSSLLG*WSLRRE Trigger: CTCCCTGCGGAGGGACCACAAGCCCAGCAAAGAGGA...AGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGCCATCTCTCCAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| CDS-3UTR CAA 90 bp | ACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCAACGTCCCCGTCCTCTTaGCTGGGCTTGTGGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TCSSRGPEFNSQQPHGGSTSPSS*LGLWSL Trigger: GAGGGACCACAAGCCCAGCAAAGAGGACGGGGACGT...TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
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| CDS-3UTR CAA 90 bp | ACAGCACTCACAGCTGCTTTACATAGGAAGGTCTCAGGGTCACTGGGTGTCAAAACGTCCCCGTCCTCTTaGCTGGGCTTGTGGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TALTAALHRKVSGSLGVKTSPSS*LGLWSL Trigger: GAGGGACCACAAGCCCAGCAAAGAGGACGGGGACGT...TTTGACACCCAGTGACCCTGAGACCTTCCTATGTAAAGCAGCTGTGAGTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR CAA 90 bp | GGGGTAAGGGACTGTCTTCTAACCGGCTCAAAGCTCTGCTCCGCCAGGCTCCCCTCCCTAGATTGCTGCTaGAGTTTCCTTAGAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GVRDCLLTGSKLCSARLPSLDCC*SFLRRA Trigger: AGCTCTTCTAAGGAAACTCAAGCAGCAATCTAGGGA...GGGGAGCCTGGCGGAGCAGAGCTTTGAGCCGGTTAGAAGACAGTCCCTTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199727.5 |
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| CDS-3UTR CAA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCCTCTCCATGATGGCCTaGTTCCGCAGGATGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQWLRALPVLPEVLSSIPLSMMA*FRRMSS Trigger: GGAGGACATCCTGCGGAACAAGGCCATCATGGAGAG...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CAA 90 bp | ACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCATCTTTCTGTCCGATATaGTGCGTGCGGATGAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: TCSSRGPEFNSQQPHGGSSFCPI*CVRMSE Trigger: CTCGCTCATCCGCACGCACAATATCGGACAGAAAGA...TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR CAA 90 bp | AACAAACAGTTTCCACTGAAAAAGGATTCAGGTGAAACAAAGAGCACCACGATGATCTTATGGCAGGCCTaGCCGCCCTTGCCGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: NKQFPLKKDSGETKSTTMILWQA*PPLPLP Trigger: CGGCAGCGGCAAGGGCGGCAAGGCCTGCCATAAGAT...CATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR CAA 90 bp | ACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCAGTTTTCTTGCTCTCTTaGCACACCAGTTCTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TCSSRGPEFNSQQPHGGSVFLLS*HTSSLP Trigger: GGGCAGAGAACTGGTGTGCAAAGAGAGCAAGAAAAC...TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAACAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| CDS-3UTR CAA 90 bp | AACAAACAGTTTCCACTGAAAAAGGATTCAGGTGAAACAAAGAGCACCACGATGTCCTCTTTGCTGGGCTaGTGGTCCCTCCGCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NKQFPLKKDSGETKSTTMSSLLG*WSLRRE Trigger: CTCCCTGCGGAGGGACCACAAGCCCAGCAAAGAGGA...CATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040787.13 ENSMUST00000199727.5 |
||
| CDS-3UTR CAA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCGGTCAGGAAAACGACTaGGGTCTTCCTTGTAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AQWLRALPVLPEVLSSIPGQEND*GLPCSL Trigger: AAGACTACAAGGAAGACCCAAGTCGTTTTCCTGACC...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CAA 90 bp | GCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCTCCCTAGATTGCTGCTaGAGTTTCCTTAGAAGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AQWLRALPVLPEVLSSIPSLDCC*SFLRRA Trigger: AGCTCTTCTAAGGAAACTCAAGCAGCAATCTAGGGA...GGGAATTGAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CAA 90 bp | AGAGATGGCTCAGTGGTTAAGAGCACTACCTGTTCTTCCAGAGGTCCTGAGTTCTGGAGGAAGCTTCATTaGAACGAATTCTCTAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RDGSVVKSTTCSSRGPEFWRKLH*NEFSKL Trigger: AAGCTTAGAGAATTCGTTCAAATGAAGCTTCCTCCA...GAACTCAGGACCTCTGGAAGAACAGGTAGTGCTCTTAACCACTGAGCCATCTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CAA 90 bp | TATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGGGGACTGGAGAGATTCTTTCTGTCCGATATaGTGCGTGCGGATGAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: YHYVRCNCKEINIGDWRDSFCPI*CVRMSE Trigger: CTCGCTCATCCGCACGCACAATATCGGACAGAAAGA...ATCTCTCCAGTCCCCGATATTTATCTCTTTACAGTTGCATCTCACATAGTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CAA 90 bp | TATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGGGGACTGGAGAGATCAAAGGCACCCAGCTTaGAAAATCCCAGTGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YHYVRCNCKEINIGDWRDQRHPA*KIPVKF Trigger: GAACTTCACTGGGATTTTCAAAGCTGGGTGCCTTTG...ATCTCTCCAGTCCCCGATATTTATCTCTTTACAGTTGCATCTCACATAGTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CAA 90 bp | AACAAACAGTTTCCACTGAAAAAGGATTCAGGTGAAACAAAGAGCACCACGATGGCTCCCTCCTTTTCCTaGATTCTAGAACAAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NKQFPLKKDSGETKSTTMAPSFS*ILEQVH Trigger: ATGGACTTGTTCTAGAATCAAGGAAAAGGAGGGAGC...CATCGTGGTGCTCTTTGTTTCACCTGAATCCTTTTTCAGTGGAAACTGTTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CAA 90 bp | TATCACTATGTGAGATGCAACTGTAAAGAGATAAATATCGGGGACTGGAGAGATAAAAAGCCATCCAGTTaGGGCACGTGTGAAAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: YHYVRCNCKEINIGDWRDKKPSS*GTCERN Trigger: ATTTCTTTCACACGTGCCCAAACTGGATGGCTTTTT...ATCTCTCCAGTCCCCGATATTTATCTCTTTACAGTTGCATCTCACATAGTGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
||
| CDS-3UTR CAA 90 bp | AACAATCCAGTGCAACCATTTTCAGTAGTACAATCCAGTGCAACAATTTTCAGTAGCTTGTTAAAGTGCTaGAAGGGTGCTATTACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NNPVQPFSVVQSSATIFSSLLKC*KGAITS Trigger: AGAAGTAATAGCACCCTTCAAGCACTTTAACAAGCT...ACTGAAAATTGTTGCACTGGATTGTACTACTGAAAATGGTTGCACTGGATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040787.13 |
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| CDS CAA 90 bp | GCTGTCGCCTCCTCCTCGCAGGGCTCCAGCACGTCCCCGTCCTCTTaGCTGGGCTTGTGGTCCCTCCGCAGGGAGCGGATCTTCTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: AVASSSQGSSTSPSS*LGLWSLRRERIFSP Trigger: CGGGGAGAAGATCCGCTCCCTGCGGAGGGACCACAAGCCCAGCAAAGAGGACGGGGACGTGCTGGAGCCCTGCGAGGAGGAGGCGACAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CAA 90 bp | TTCAGCTGCAGCCGGTGGTGGTGGCTGAAGATCTTATGGCAGGCCTaGCCGCCCTTGCCGCTGCCGCCCGGTCCGCTTCTGCCCCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: FSCSRWWWLKILWQA*PPLPLPPGPLLPPV Trigger: CACCGGGGGCAGAAGCGGACCGGGCGGCAGCGGCAAGGGCGGCAAGGCCTGCCATAAGATCTTCAGCCACCACCACCGGCTGCAGCTGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS TCA 72 bp | CGGCGGGCGCCTTCAGCTGCAGCCGGTGGTGGTGGCTaGAGATCTTATGGCAGGCCTTGCCGCCCTTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RRAPSAAAGGGG*RSYGRPCRPCR Trigger: GCGGCAAGGGCGGCAAGGCCTGCCATAAGATCTTCAGCCACCACCACCGGCTGCAGCTGAAGGCGCCCGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CCA 72 bp | CCCGGAACGGCGGGCGCCTTCAGCTGCAGCCGGTGGTaGTGGCTGAAGATCTTATGGCAGGCCTTGCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: PGTAGAFSCSRW*WLKILWQALPP Trigger: GGGCGGCAAGGCCTGCCATAAGATCTTCAGCCACCACCACCGGCTGCAGCTGAAGGCGCCCGCCGTTCCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS GCA 72 bp | CCTCCTCGCAGGGCTCCAGCACGTCCCCGTCCTCTTTaGTGGGCTTGTGGTCCCTCCGCAGGGAGCGGATCT | + |
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Preference number: 6 (lower is better) Translates to: PPRRAPARPRPL*WACGPSAGSGS Trigger: AGATCCGCTCCCTGCGGAGGGACCACAAGCCCAGCAAAGAGGACGGGGACGTGCTGGAGCCCTGCGAGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CCA 72 bp | GGCTCCAGCACGTCCCCGTCCTCTTTGCTGGGCTTGTaGTCCCTCCGCAGGGAGCGGATCTTCTCCCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: GSSTSPSSLLGL*SLRRERIFSPV Trigger: GACCGGGGAGAAGATCCGCTCCCTGCGGAGGGACCACAAGCCCAGCAAAGAGGACGGGGACGTGCTGGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CAA 72 bp | CAGGGCTCCAGCACGTCCCCGTCCTCTTTGCTGGGCTaGTGGTCCCTCCGCAGGGAGCGGATCTTCTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: QGSSTSPSSLLG*WSLRRERIFSP Trigger: CGGGGAGAAGATCCGCTCCCTGCGGAGGGACCACAAGCCCAGCAAAGAGGACGGGGACGTGCTGGAGCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CAA 72 bp | TCCTCCTCGCAGGGCTCCAGCACGTCCCCGTCCTCTTaGCTGGGCTTGTGGTCCCTCCGCAGGGAGCGGATC | + |
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Preference number: 6 (lower is better) Translates to: SSSQGSSTSPSS*LGLWSLRRERI Trigger: GATCCGCTCCCTGCGGAGGGACCACAAGCCCAGCAAAGAGGACGGGGACGTGCTGGAGCCCTGCGAGGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CAA 72 bp | AGCCGGTGGTGGTGGCTGAAGATCTTATGGCAGGCCTaGCCGCCCTTGCCGCTGCCGCCCGGTCCGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SRWWWLKILWQA*PPLPLPPGPLL Trigger: CAGAAGCGGACCGGGCGGCAGCGGCAAGGGCGGCAAGGCCTGCCATAAGATCTTCAGCCACCACCACCGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CCA 72 bp | CCTCGCAGGGCTCCAGCACGTCCCCGTCCTCTTTGCTaGGCTTGTGGTCCCTCCGCAGGGAGCGGATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PRRAPARPRPLC*ACGPSAGSGSS Trigger: AGAAGATCCGCTCCCTGCGGAGGGACCACAAGCCCAGCAAAGAGGACGGGGACGTGCTGGAGCCCTGCGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CCA 72 bp | GGAACGGCGGGCGCCTTCAGCTGCAGCCGGTGGTGGTaGCTGAAGATCTTATGGCAGGCCTTGCCGCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: GTAGAFSCSRWW*LKILWQALPPL Trigger: CAAGGGCGGCAAGGCCTGCCATAAGATCTTCAGCCACCACCACCGGCTGCAGCTGAAGGCGCCCGCCGTTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS GCA 72 bp | AACCTAGGTCGTTTTTCTCCAACACTCTCCCTAGATTaGTGCTTGAGTTTCCTTAGAAGAGCTGTGATCATC | + |
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Preference number: 6 (lower is better) Translates to: NLGRFSPTLSLD*CLSFLRRAVII Trigger: GATGATCACAGCTCTTCTAAGGAAACTCAAGCAGCAATCTAGGGAGAGTGTTGGAGAAAAACGACCTAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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| CDS CAA 72 bp | ATGAGAGTTGTGTCAAGCCTGATGTTGATACCTTGCTaGTATATTTTACAGGCATCAGAAGGCAGAATTCGG | + |
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Preference number: 6 (lower is better) Translates to: MRVVSSLMLIPC*YILQASEGRIR Trigger: CCGAATTCTGCCTTCTGATGCCTGTAAAATATACAAGCAAGGTATCAACATCAGGCTTGACACAACTCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040787.13 ENSMUST00000164582.4 ENSMUST00000199727.5 |
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