Pregenerated sensors for ANKRD13A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041870Ensembl transcript IDs: ENSMUST00000102578.11, ENSMUST00000137519.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCGAATGGAAGGTAAAGATGCTCTCCTCCCCTCGGTGTGGAGATaGGGCTCTGCCGACGCCCGGATCTCCGCTCTGGGGAGTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: QRMEGKDALLPSVWR*GSADARISALGSPW Trigger: CCAGGGACTCCCCAGAGCGGAGATCCGGGCGTCGGCAGAGCCCCATCTCCACACCGAGGGGAGGAGAGCATCTTTACCTTCCATTCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CCA 90 bp | CTCCCCAGGCTGGAAATCCTAAGTGGGAGCAGGCGGAGAACACACTaGCTGGGCTCTTCCAGTGATGTGGCCAGCTTGCCTGCTCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: LPRLEILSGSRRRTH*LGSSSDVASLPALR Trigger: TCTCAGAGCAGGCAAGCTGGCCACATCACTGGAAGAGCCCAGCCAGTGTGTTCTCCGCCTGCTCCCACTTAGGATTTCCAGCCTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CCA 90 bp | TTACTGGCAACGCTGACTGTATCAAACAGACATTCCTGGGAATGGTaGCTTCTCTTCCTATCCCCAAAGAAGCATAACAGGAAACAGACA | + |
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Preference number: 1 (lower is better) Translates to: LLATLTVSNRHSWEW*LLFLSPKKHNRKQT Trigger: TGTCTGTTTCCTGTTATGCTTCTTTGGGGATAGGAAGAGAAGCCACCATTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGCCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR GCA 90 bp | AAGCAGTGTGGAGTCATCATTTTTCCCTTTTGGATGAAGAGCCTCTaGTCTAAGTTAGCTCCCTTTCTTGTTTCAAGTTCGTCCTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: KQCGVIIFPFWMKSL*SKLAPFLVSSSSCP Trigger: AGGACAGGACGAACTTGAAACAAGAAAGGGAGCTAACTTAGAGCAGAGGCTCTTCATCCAAAAGGGAAAAATGATGACTCCACACTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CCA 90 bp | ATTTTACTGGCAACGCTGACTGTATCAAACAGACATTCCTGGGAATaGTGGCTTCTCTTCCTATCCCCAAAGAAGCATAACAGGAAACAG | + |
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Preference number: 1 (lower is better) Translates to: ILLATLTVSNRHSWE*WLLFLSPKKHNRKQ Trigger: CTGTTTCCTGTTATGCTTCTTTGGGGATAGGAAGAGAAGCCACCATTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGCCAGTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR GCA 90 bp | AAGCCAGGCTGTGCAGCTGGGTCTCCCCAGGCTGGAAATCCTAAGTGGGAGCAGCACTGGCATGGCACGTaGAGCCCAGAGCCTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: KPGCAAGSPQAGNPKWEQHWHGT*SPEPLL Trigger: GAGCAGAGGCTCTGGGCTGCACGTGCCATGCCAGTG...CTGCTCCCACTTAGGATTTCCAGCCTGGGGAGACCCAGCTGCACAGCCTGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR GCA 90 bp | AAGCCAGGCTGTGCAGCTGGGTCTCCCCAGGCTGGAAATCCTAAGTGGGAGCAGTGTGGCCAGCTTGCCTaGTCTGAGAACCCAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: KPGCAAGSPQAGNPKWEQCGQLA*SENPAT Trigger: TGTGGCTGGGTTCTCAGAGCAGGCAAGCTGGCCACA...CTGCTCCCACTTAGGATTTCCAGCCTGGGGAGACCCAGCTGCACAGCCTGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGGCTGGAAATCCTAAGTGGGAGCAGGCGGAGAACACACTGGCTGGGCTCGCTGCTGTTCTCCTGTaGAAAAGCACCGTGACTCCG | + |
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Preference number: 2 (lower is better) Translates to: PQAGNPKWEQAENTLAGLAAVLL*KSTVTP Trigger: CGGAGTCACGGTGCTTTTCCACAGGAGAACAGCAGC...GAGCCCAGCCAGTGTGTTCTCCGCCTGCTCCCACTTAGGATTTCCAGCCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR GCA 90 bp | AACGTCTCCAGCTCGTACCCACTCTACAAAGGCTGCTGTTCTCCTGTGGAAAAGGCAGCCCAGAGCCTCTaGTCTGCAGCCCTGGACGGC | + |
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Preference number: 2 (lower is better) Translates to: NVSSSYPLYKGCCSPVEKAAQSL*SAALDG Trigger: GCCGTCCAGGGCTGCAGAGCAGAGGCTCTGGGCTGC...CTTTTCCACAGGAGAACAGCAGCCTTTGTAGAGTGGGTACGAGCTGGAGACGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGGCTGGAAATCCTAAGTGGGAGCAGGCGGAGAACACACTGGCTGGGCTCATGGGACTGGCACAATaGCAATGCTGCAAGAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: PQAGNPKWEQAENTLAGLMGLAQ*QCCKSP Trigger: AGGGCTCTTGCAGCATTGCCATTGTGCCAGTCCCAT...GAGCCCAGCCAGTGTGTTCTCCGCCTGCTCCCACTTAGGATTTCCAGCCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR TCA 90 bp | TGGATGCCTGCGCCAGGTGAGAGGGGCAAGGTGCCCTCGGCTGTGTTCCCCAGGTTTTTCCCTTTTGGATaGAGAGCCTCTGCTCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: WMPAPGERGKVPSAVFPRFFPFG*RASALS Trigger: ACTTAGAGCAGAGGCTCTTCATCCAAAAGGGAAAAA...CCTGGGGAACACAGCCGAGGGCACCTTGCCCCTCTCACCTGGCGCAGGCATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGGAACGTCTCCAGCTCGTACCCACTCTACAAAGGCTGCTGTTCTCCTGTCCAGAGCCTCTGCTCTaGAGCCCTGGACGGCAATGT | + |
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Preference number: 2 (lower is better) Translates to: RKERLQLVPTLQRLLFSCPEPLL*SPGRQC Trigger: ACATTGCCGTCCAGGGCTGCAGAGCAGAGGCTCTGG...ACAGGAGAACAGCAGCCTTTGTAGAGTGGGTACGAGCTGGAGACGTTCCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGCTGGGTCTCCCCAGGCTGGAAATCCTAAGTGGGAGCAGGCGGAGAACAAGGTGGAAATGGGACTaGCACAATGGCAATGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: VQLGLPRLEILSGSRRRTRWKWD*HNGNAA Trigger: TGCAGCATTGCCATTGTGCCAGTCCCATTTCCACCT...TGTTCTCCGCCTGCTCCCACTTAGGATTTCCAGCCTGGGGAGACCCAGCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAGGCTGTGCAGCTGGGTCTCCCCAGGCTGGAAATCCTAAGTGGGAGCAGCTAAGGCAACATCCGTaGTCATTTGTATATCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: KPGCAAGSPQAGNPKWEQLRQHP*SFVYLN Trigger: ATTCAGATATACAAATGACCACGGATGTTGCCTTAG...CTGCTCCCACTTAGGATTTCCAGCCTGGGGAGACCCAGCTGCACAGCCTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR GCA 90 bp | AACGTCTCCAGCTCGTACCCACTCTACAAAGGCTGCTGTTCTCCTGTGGAAAAGATGCATCTACTAGCCTaGAGGCTCAGCATTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: NVSSSYPLYKGCCSPVEKMHLLA*RLSISV Trigger: GACAGAAATGCTGAGCCTGCAGGCTAGTAGATGCAT...CTTTTCCACAGGAGAACAGCAGCCTTTGTAGAGTGGGTACGAGCTGGAGACGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR TCA 90 bp | AGGTGCCCTCGGCTGTGTTCCCCAGGGGTTGGGCTGTTATGCAGTAGGTATTTATATCCAAAAGAGGCCTaGGAAAGTCTGGTTAAAATG | + |
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Preference number: 2 (lower is better) Translates to: RCPRLCSPGVGLLCSRYLYPKEA*ESLVKM Trigger: CATTTTAACCAGACTTTCTCAGGCCTCTTTTGGATA...TAAATACCTACTGCATAACAGCCCAACCCCTGGGGAACACAGCCGAGGGCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR TCA 90 bp | GAAAGTCTGGTTAAAATGCATAACCTTGTATTGCTACTGATGGGAGGAGTCAGTAACCCGTTTCTTTGGTaGACAGGAAGGAACGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: ESLVKMHNLVLLLMGGVSNPFLW*TGRNVS Trigger: GGAGACGTTCCTTCCTGTTCACCAAAGAAACGGGTT...ACTGACTCCTCCCATCAGTAGCAATACAAGGTTATGCATTTTAACCAGACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR CCA 90 bp | GAAAGTCTGGTTAAAATGCATAACCTTGTATTGCTACTGATGGGAGGAGTCAGTAGGCATGGAACGAGGTaGAAATGGGACTGGCACAAT | + |
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Preference number: 2 (lower is better) Translates to: ESLVKMHNLVLLLMGGVSRHGTR*KWDWHN Trigger: ATTGTGCCAGTCCCATTTCCACCTCGTTCCATGCCT...ACTGACTCCTCCCATCAGTAGCAATACAAGGTTATGCATTTTAACCAGACTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CCA 72 bp | GAAGGTAAAGATGCTCTCCTCCCCTCGGTGTGGAGATaGGGCTCTGCCGACGCCCGGATCTCCGCTCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: EGKDALLPSVWR*GSADARISALG Trigger: CCCCAGAGCGGAGATCCGGGCGTCGGCAGAGCCCCATCTCCACACCGAGGGGAGGAGAGCATCTTTACCTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CCA 72 bp | GGAGATGGGGCTCTGCCGACGCCCGGATCTCCGCTCTaGGGAGTCCCTGGTCCTGCACCTCTACATAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: GDGALPTPGSPL*GVPGPAPLHKE Trigger: TTCCTTATGTAGAGGTGCAGGACCAGGGACTCCCCAGAGCGGAGATCCGGGCGTCGGCAGAGCCCCATCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR TCA 72 bp | GAGCAGGCGGAGAACACACTGGCTGGGCTCTTCCAGTaGTGTGGCCAGCTTGCCTGCTCTGAGAACCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: EQAENTLAGLFQ*CGQLACSENPA Trigger: GGCTGGGTTCTCAGAGCAGGCAAGCTGGCCACATCACTGGAAGAGCCCAGCCAGTGTGTTCTCCGCCTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CCA 72 bp | CGAATGGAAGGTAAAGATGCTCTCCTCCCCTCGGTGTaGAGATGGGGCTCTGCCGACGCCCGGATCTCCGCT | + |
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Preference number: 3 (lower is better) Translates to: RMEGKDALLPSV*RWGSADARISA Trigger: AGCGGAGATCCGGGCGTCGGCAGAGCCCCATCTCCACACCGAGGGGAGGAGAGCATCTTTACCTTCCATTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CCA 72 bp | TGTGCAGCTGGGTCTCCCCAGGCTGGAAATCCTAAGTaGGAGCAGGCGGAGAACACACTGGCTGGGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: CAAGSPQAGNPK*EQAENTLAGLF Trigger: GAAGAGCCCAGCCAGTGTGTTCTCCGCCTGCTCCCACTTAGGATTTCCAGCCTGGGGAGACCCAGCTGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CCA 72 bp | GGGGGTAAAAGGCATGGAACGAGGTGGAAATGGGACTaGCACAATGGCAATGCTGCAAGAGCCCTACGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GGKRHGTRWKWD*HNGNAARALRE Trigger: TTCCCGTAGGGCTCTTGCAGCATTGCCATTGTGCCAGTCCCATTTCCACCTCGTTCCATGCCTTTTACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CCA 72 bp | AAGGCATGGAACGAGGTGGAAATGGGACTGGCACAATaGCAATGCTGCAAGAGCCCTACGGGAAGGGAAATA | + |
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Preference number: 3 (lower is better) Translates to: KAWNEVEMGLAQ*QCCKSPTGREI Trigger: TATTTCCCTTCCCGTAGGGCTCTTGCAGCATTGCCATTGTGCCAGTCCCATTTCCACCTCGTTCCATGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CCA 72 bp | ATCCTCTTGGCTGGGGGTAAAAGGCATGGAACGAGGTaGAAATGGGACTGGCACAATGGCAATGCTGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: ILLAGGKRHGTR*KWDWHNGNAAR Trigger: TCTTGCAGCATTGCCATTGTGCCAGTCCCATTTCCACCTCGTTCCATGCCTTTTACCCCCAGCCAAGAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR-3UTR CAA 90 bp | GAACATTTTACTGGCAACGCTGACTGTATCAAACAGACATTCCTGGGAATGGTGGTGATCAGCACAGCCTaGTGGGGGTGGATGCCTGCG | + |
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Preference number: 3 (lower is better) Translates to: EHFTGNADCIKQTFLGMVVISTA*WGWMPA Trigger: CGCAGGCATCCACCCCCACAAGGCTGTGCTGATCAC...CACCATTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGCCAGTAAAATGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CCA 72 bp | GCAACGCTGACTGTATCAAACAGACATTCCTGGGAATaGTGGCTTCTCTTCCTATCCCCAAAGAAGCATAAC | + |
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Preference number: 3 (lower is better) Translates to: ATLTVSNRHSWE*WLLFLSPKKHN Trigger: GTTATGCTTCTTTGGGGATAGGAAGAGAAGCCACCATTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR GCA 72 bp | GGAGTCATCATTTTTCCCTTTTGGATGAAGAGCCTCTaGTCTAAGTTAGCTCCCTTTCTTGTTTCAAGTTCG | + |
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Preference number: 3 (lower is better) Translates to: GVIIFPFWMKSL*SKLAPFLVSSS Trigger: CGAACTTGAAACAAGAAAGGGAGCTAACTTAGAGCAGAGGCTCTTCATCCAAAAGGGAAAAATGATGACTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR GCA 90 bp | TGGATGCCTGCGCCAGGTGAGAGGGGCAAGGTGCCCTCGGCTGTGTTCCCCAGGTTCCAGACCAGGAGGTaGAGCGGGAAGCGGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: WMPAPGERGKVPSAVFPRFQTRR*SGKRLL Trigger: CAGCAGCCGCTTCCCGCTGCACCTCCTGGTCTGGAA...CCTGGGGAACACAGCCGAGGGCACCTTGCCCCTCTCACCTGGCGCAGGCATCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR TCA 90 bp | GTGCAGCTGGGTCTCCCCAGGCTGGAAATCCTAAGTGGGAGCAGGCGGAGAACAATCGGCTCGACTCGCTaGGGCCACCTGGGCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: VQLGLPRLEILSGSRRRTIGSTR*GHLGTC Trigger: GCAGGTGCCCAGGTGGCCTCAGCGAGTCGAGCCGAT...TGTTCTCCGCCTGCTCCCACTTAGGATTTCCAGCCTGGGGAGACCCAGCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | GTGCAGCTGGGTCTCCCCAGGCTGGAAATCCTAAGTGGGAGCAGGCGGAGAACATCCGCTTCTTCCTCCTaGAGCCTGAGCTCCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VQLGLPRLEILSGSRRRTSASSS*SLSSRS Trigger: GGAGCGGGAGCTCAGGCTCCAGGAGGAAGAAGCGGA...TGTTCTCCGCCTGCTCCCACTTAGGATTTCCAGCCTGGGGAGACCCAGCTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR TCA 90 bp | CTAAGTGGGAGCAGGCGGAGAACACACTGGCTGGGCTCTTCCAGTGATGTGGCCAGTACTCGTCGGGAGTaGTGGCCGTGGGGTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: LSGSRRRTHWLGSSSDVASTRRE*WPWGCS Trigger: TGAACAACCCCACGGCCATCACTCCCGACGAGTACT...GGCCACATCACTGGAAGAGCCCAGCCAGTGTGTTCTCCGCCTGCTCCCACTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | GTGCAGCTGGGTCTCCCCAGGCTGGAAATCCTAAGTGGGAGCAGGCGGAGAACATGGCAGACAGCTCCATaGCCAGCTGCAGGTCGCTAT | + |
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Preference number: 4 (lower is better) Translates to: VQLGLPRLEILSGSRRRTWQTAP*PAAGRY Trigger: ATAGCGACCTGCAGCTGGCCATGGAGCTGTCTGCCA...TGTTCTCCGCCTGCTCCCACTTAGGATTTCCAGCCTGGGGAGACCCAGCTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | AAAAATGTGACCTGCCAGGCAGGACAGCGAATGGAAGGTAAAGATGCTCTCCTCGCGGGAAGCGGCTGCTaGTGTCGCGGGCCGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: KNVTCQAGQRMEGKDALLAGSGC*CRGPRT Trigger: TGTCCTCGGCCCGCGACACCAGCAGCCGCTTCCCGC...GAGGAGAGCATCTTTACCTTCCATTCGCTGTCCTGCCTGGCAGGTCACATTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | CAAGGTGCCCTCGGCTGTGTTCCCCAGGGGTTGGGCTGTTATGCAGTAGGTATTGCTCCGCCAGCTCTTTaGCAGACAGCTCCATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QGALGCVPQGLGCYAVGIAPPAL*QTAPWP Trigger: TGGCCATGGAGCTGTCTGCCAAAGAGCTGGCGGAGC...AATACCTACTGCATAACAGCCCAACCCCTGGGGAACACAGCCGAGGGCACCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | CCCCAGGCTGGAAATCCTAAGTGGGAGCAGGCGGAGAACACACTGGCTGGGCTCAGCTGTAAGACTTGCTaGAGCTCCGCTTCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PQAGNPKWEQAENTLAGLSCKTC*SSASSS Trigger: GGAGGAAGAAGCGGAGCTCCAGCAAGTCTTACAGCT...GAGCCCAGCCAGTGTGTTCTCCGCCTGCTCCCACTTAGGATTTCCAGCCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR GCA 90 bp | AACGTCTCCAGCTCGTACCCACTCTACAAAGGCTGCTGTTCTCCTGTGGAAAAGGGGGTCCAAGGCCTCTaGATTCTGGTCCCGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: NVSSSYPLYKGCCSPVEKGVQGL*ILVPQL Trigger: GAGCTGCGGGACCAGAATGCAGAGGCCTTGGACCCC...CTTTTCCACAGGAGAACAGCAGCCTTTGTAGAGTGGGTACGAGCTGGAGACGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR TCA 90 bp | CAAGGTGCCCTCGGCTGTGTTCCCCAGGGGTTGGGCTGTTATGCAGTAGGTATTAGCTCCGCCTCCCTCTaGTCCAGCTCATGTTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: QGALGCVPQGLGCYAVGISSASL*SSSCFQ Trigger: TTGAAAACATGAGCTGGATCAGAGGGAGGCGGAGCT...AATACCTACTGCATAACAGCCCAACCCCTGGGGAACACAGCCGAGGGCACCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR TCA 90 bp | CCCCAGGCTGGAAATCCTAAGTGGGAGCAGGCGGAGAACACACTGGCTGGGCTCGGATGGCAAACTGCATaGTCTCATAGTCTTCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: PQAGNPKWEQAENTLAGLGWQTA*SHSLRL Trigger: AAGACGAAGACTATGAGATCATGCAGTTTGCCATCC...GAGCCCAGCCAGTGTGTTCTCCGCCTGCTCCCACTTAGGATTTCCAGCCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | CTAAGTGGGAGCAGGCGGAGAACACACTGGCTGGGCTCTTCCAGTGATGTGGCCAGGCGCTCCATTTCTTaGGAAAGATCGAAGTGTTCG | + |
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Preference number: 4 (lower is better) Translates to: LSGSRRRTHWLGSSSDVARRSIS*ERSKCS Trigger: CGAACACTTCGATCTTTCCCAAGAAATGGAGCGCCT...GGCCACATCACTGGAAGAGCCCAGCCAGTGTGTTCTCCGCCTGCTCCCACTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | GGTGTAGCCCAGAGGATGCTGCTCCCAAAGGGACTGCCTTTACAGATTCAAATCGGTCCTGGCTCCTACTaGACTCCAGCAGGCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GVAQRMLLPKGLPLQIQIGPGSY*TPAGSA Trigger: AGCAGAGCCTGCTGGAGTCCAGTAGGAGCCAGGACC...GATTTGAATCTGTAAAGGCAGTCCCTTTGGGAGCAGCATCCTCTGGGCTACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | AGGAAGGAACGTCTCCAGCTCGTACCCACTCTACAAAGGCTGCTGTTCTCCTGTCAACCTCGAAGTTTGTaGCCTCGGAAACTGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: RKERLQLVPTLQRLLFSCQPRSL*PRKLPR Trigger: CCGAGGCAGTTTCCGAGGCCACAAACTTCGAGGTTG...ACAGGAGAACAGCAGCCTTTGTAGAGTGGGTACGAGCTGGAGACGTTCCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR TCA 90 bp | TCTCAGAACATTTTACTGGCAACGCTGACTGTATCAAACAGACATTCCTGGGAACTTCCTCCTGGAGCCTaGGCTCCCGCTCCGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SQNILLATLTVSNRHSWELPPGA*APAPPA Trigger: AGCTGGCGGAGCGGGAGCTCAGGCTCCAGGAGGAAG...TTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGCCAGTAAAATGTTCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR GCA 90 bp | TACCCACTCTACAAAGGCTGCTGTTCTCCTGTGGAAAAGCACCGTGACTCCGCACGAGCAGATTCCAGATaGCCCAGAGAAACTGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: YPLYKGCCSPVEKHRDSARADSR*PRETAR Trigger: CCTTGCAGTTTCTCTGGGGCATCTGGAATCTGCTCG...TGCGGAGTCACGGTGCTTTTCCACAGGAGAACAGCAGCCTTTGTAGAGTGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | ATGCTGCAAGAGCCCTACGGGAAGGGAAATAAAGAGGTCAGCATAACCCGTTTCGTCCCCTCCACACCCTaGCTCTCATCAGCAGTGCTA | + |
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Preference number: 4 (lower is better) Translates to: MLQEPYGKGNKEVSITRFVPSTP*LSSAVL Trigger: TAGCACTGCTGATGAGAGCCAGGGTGTGGAGGGGAC...GAAACGGGTTATGCTGACCTCTTTATTTCCCTTCCCGTAGGGCTCTTGCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | AGGAAGGAACGTCTCCAGCTCGTACCCACTCTACAAAGGCTGCTGTTCTCCTGTACCTGCCCTCCATGTTaGTTAGGAGACTCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKERLQLVPTLQRLLFSCTCPPC*LGDSPG Trigger: TCCAGGAGAGTCTCCTAACCAACATGGAGGGCAGGT...ACAGGAGAACAGCAGCCTTTGTAGAGTGGGTACGAGCTGGAGACGTTCCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR GCA 90 bp | AAAAATGTGACCTGCCAGGCAGGACAGCGAATGGAAGGTAAAGATGCTCTCCTCGACTCCAGCAGGCTCTaGTGGATGGCAAACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KNVTCQAGQRMEGKDALLDSSRL*WMANCM Trigger: CATGCAGTTTGCCATCCAGCAGAGCCTGCTGGAGTC...GAGGAGAGCATCTTTACCTTCCATTCGCTGTCCTGCCTGGCAGGTCACATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | AGGAAGGAACGTCTCCAGCTCGTACCCACTCTACAAAGGCTGCTGTTCTCCTGTCCTGGCCGTTCTCTTTaGTCACATCTGCTTTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKERLQLVPTLQRLLFSCPGRSL*SHLLYG Trigger: GCCATAAAGCAGATGTGACCAAAGAGAACGGCCAGG...ACAGGAGAACAGCAGCCTTTGTAGAGTGGGTACGAGCTGGAGACGTTCCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | GGTGTAGCCCAGAGGATGCTGCTCCCAAAGGGACTGCCTTTACAGATTCAAATCCACCTCCCTGCTTTTTaGCTTCATCAGGTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVAQRMLLPKGLPLQIQIHLPAF*LHQVQG Trigger: ACCCTGGACCTGATGAAGCCAAAAAGCAGGGAGGTG...GATTTGAATCTGTAAAGGCAGTCCCTTTGGGAGCAGCATCCTCTGGGCTACACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | GTGCAGCTGGGTCTCCCCAGGCTGGAAATCCTAAGTGGGAGCAGGCGGAGAACACGTGCGTTTAAGACGTaGAATAAGGGGATTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: VQLGLPRLEILSGSRRRTRAFKT*NKGISI Trigger: AATAGAAATCCCCTTATTCCACGTCTTAAACGCACG...TGTTCTCCGCCTGCTCCCACTTAGGATTTCCAGCCTGGGGAGACCCAGCTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR TCA 90 bp | CAAGGTGCCCTCGGCTGTGTTCCCCAGGGGTTGGGCTGTTATGCAGTAGGTATTTGGCTTCGTAACCATTaGCAACTTCAGCTTTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGALGCVPQGLGCYAVGIWLRNH*QLQLYL Trigger: CAGATAAAGCTGAAGTTGTCAATGGTTACGAAGCCA...AATACCTACTGCATAACAGCCCAACCCCTGGGGAACACAGCCGAGGGCACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR GCA 90 bp | TACCCACTCTACAAAGGCTGCTGTTCTCCTGTGGAAAAGCACCGTGACTCCGCATCTTCGTCTTGCAGGTaGACGTTTCTGCCATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YPLYKGCCSPVEKHRDSASSSCR*TFLPLS Trigger: AGACAATGGCAGAAACGTGCACCTGCAAGACGAAGA...TGCGGAGTCACGGTGCTTTTCCACAGGAGAACAGCAGCCTTTGTAGAGTGGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR GCA 90 bp | AAAAATGTGACCTGCCAGGCAGGACAGCGAATGGAAGGTAAAGATGCTCTCCTCGACAGCTGTAAGACTTaGTGGAGCTCCGCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KNVTCQAGQRMEGKDALLDSCKT*WSSASS Trigger: GGAAGAAGCGGAGCTCCAGCAAGTCTTACAGCTGTC...GAGGAGAGCATCTTTACCTTCCATTCGCTGTCCTGCCTGGCAGGTCACATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | AACGTCTCCAGCTCGTACCCACTCTACAAAGGCTGCTGTTCTCCTGTGGAAAAGGTCACATCTGCTTTATaGCGCAGCAAGACTCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVSSSYPLYKGCCSPVEKVTSAL*RSKTRA Trigger: TGCTCGAGTCTTGCTGCGCCATAAAGCAGATGTGAC...CTTTTCCACAGGAGAACAGCAGCCTTTGTAGAGTGGGTACGAGCTGGAGACGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | ATGCTGCAAGAGCCCTACGGGAAGGGAAATAAAGAGGTCAGCATAACCCGTTTCGTTAGGAGACTCTCCTaGATGGCCCTCTCATACTGG | + |
|
Preference number: 4 (lower is better) Translates to: MLQEPYGKGNKEVSITRFVRRLS*MALSYW Trigger: CCAGTATGAGAGGGCCATCCAGGAGAGTCTCCTAAC...GAAACGGGTTATGCTGACCTCTTTATTTCCCTTCCCGTAGGGCTCTTGCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
||
| CDS-3UTR TCA 90 bp | GAACATTTTACTGGCAACGCTGACTGTATCAAACAGACATTCCTGGGAATGGTGTCATCAGGTCCAGGGTaGGGCGCTCCATTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: EHFTGNADCIKQTFLGMVSSGPG*GAPFLG Trigger: CCCAAGAAATGGAGCGCCTCACCCTGGACCTGATGA...CACCATTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGCCAGTAAAATGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | AGGTGCCCTCGGCTGTGTTCCCCAGGGGTTGGGCTGTTATGCAGTAGGTATTTAAATTGTCAGCTCTTTTaGTCTTCCAATGTCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RCPRLCSPGVGLLCSRYLNCQLF*SSNVPV Trigger: GACAGGGACATTGGAAGACCAAAAGAGCTGACAATT...TAAATACCTACTGCATAACAGCCCAACCCCTGGGGAACACAGCCGAGGGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| 3UTR CAA 72 bp | AGGAAACAGACAGAGAACAGAGGAAAAGGTACTGTTTaGCCGTGTGATCAGCACAGCCTTGTGGGGGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKQTENRGKGTV*PCDQHSLVGVD Trigger: ATCCACCCCCACAAGGCTGTGCTGATCACACGGCAAAACAGTACCTTTTCCTCTGTTCTCTGTCTGTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
||
| CDS-3UTR GCA 90 bp | AGGTGCCCTCGGCTGTGTTCCCCAGGGGTTGGGCTGTTATGCAGTAGGTATTTAGTAGCCTTAAACTTCTaGGTTCTAATTGTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCPRLCSPGVGLLCSRYLVALNF*VLIVSS Trigger: AGAGCTGACAATTAGAACGCAGAAGTTTAAGGCTAC...TAAATACCTACTGCATAACAGCCCAACCCCTGGGGAACACAGCCGAGGGCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | TCTCAGAACATTTTACTGGCAACGCTGACTGTATCAAACAGACATTCCTGGGAAAAGGCCTCTGCATTCTaGTCCCGCAGCTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQNILLATLTVSNRHSWEKASAF*SRSSFS Trigger: GGAGAAGGAGCTGCGGGACCAGAATGCAGAGGCCTT...TTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGCCAGTAAAATGTTCTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | GAACATTTTACTGGCAACGCTGACTGTATCAAACAGACATTCCTGGGAATGGTGCACCTTCCAGGGCCATaGACGTGTTGTGGTAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EHFTGNADCIKQTFLGMVHLPGP*TCCGSL Trigger: GAGACTACCACAACACGTCCATGGCCCTGGAAGGTG...CACCATTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGCCAGTAAAATGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CCA 90 bp | GAACATTTTACTGGCAACGCTGACTGTATCAAACAGACATTCCTGGGAATGGTGAAGACTGTCCATCCCTaGCCGTTCTCTTTGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: EHFTGNADCIKQTFLGMVKTVHP*PFSLVT Trigger: TGTGACCAAAGAGAACGGCCAGGGATGGACAGTCTT...CACCATTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGCCAGTAAAATGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR GCA 90 bp | GAACATTTTACTGGCAACGCTGACTGTATCAAACAGACATTCCTGGGAATGGTGGCAGGTGCACGTTTCTaGCATTGTCTTGAATGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EHFTGNADCIKQTFLGMVAGARF*HCLECG Trigger: ACCACATTCAAGACAATGGCAGAAACGTGCACCTGC...CACCATTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGCCAGTAAAATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR TCA 90 bp | TCTCAGAACATTTTACTGGCAACGCTGACTGTATCAAACAGACATTCCTGGGAAAGGGGATTTCTATTTTaGCAGGGAATCCAGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQNILLATLTVSNRHSWERGFLF*QGIQEG Trigger: TCCCTCCTGGATTCCCTGTCAAAATAGAAATCCCCT...TTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGCCAGTAAAATGTTCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS TCA 90 bp | GCTCCATGGCCAGCTGCAGGTCGCTATCGAATCGGCTCGACTCGCTaGGGCCACCTGGGCACCTGCCCTCCATGTTGGTTAGGAGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: APWPAAGRYRIGSTR*GHLGTCPPCWLGDS Trigger: AGAGTCTCCTAACCAACATGGAGGGCAGGTGCCCAGGTGGCCTCAGCGAGTCGAGCCGATTCGATAGCGACCTGCAGCTGGCCATGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS TCA 90 bp | ACAGCTGTAAGACTTGCTGGAGCTCCGCTTCTTCCTCCTGGAGCCTaGGCTCCCGCTCCGCCAGCTCTTTGGCAGACAGCTCCATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TAVRLAGAPLLPPGA*APAPPALWQTAPWP Trigger: TGGCCATGGAGCTGTCTGCCAAAGAGCTGGCGGAGCGGGAGCTCAGGCTCCAGGAGGAAGAAGCGGAGCTCCAGCAAGTCTTACAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CCA 90 bp | GTGAGAGACAGCTGTAAGACTTGCTGGAGCTCCGCTTCTTCCTCCTaGAGCCTGAGCTCCCGCTCCGCCAGCTCTTTGGCAGACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRDSCKTCWSSASSS*SLSSRSASSLADSS Trigger: GGAGCTGTCTGCCAAAGAGCTGGCGGAGCGGGAGCTCAGGCTCCAGGAGGAAGAAGCGGAGCTCCAGCAAGTCTTACAGCTGTCTCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS GCA 90 bp | AGTCTCGGTGCTGCAGGACGGTGTACACCATCTCGGGATCGCCCGTaGTCACAGCTTCGTGTAAGACTGTCCATCCCTGGCCGTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLGAAGRCTPSRDRP*SQLRVRLSIPGRSL Trigger: AAGAGAACGGCCAGGGATGGACAGTCTTACACGAAGCTGTGAGCACGGGCGATCCCGAGATGGTGTACACCGTCCTGCAGCACCGAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CCA 90 bp | TTTGTGGCCTCGGAAACTGCCTCGGCCGGGGTCCCCTCCACACCCTaGCTCTCATCAGCAGTGCTACAGCCATTGACATTTCCGAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: FVASETASAGVPSTP*LSSAVLQPLTFPNV Trigger: CACATTCGGAAATGTCAATGGCTGTAGCACTGCTGATGAGAGCCAGGGTGTGGAGGGGACCCCGGCCGAGGCAGTTTCCGAGGCCACAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS GCA 90 bp | TTCAAAGACAGACTGATCAACCTCGAAGTTTGTGGCCTCGGAAACTaGCTCGGCCGGGGTCCCCTCCACACCCTGGCTCTCATCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FKDRLINLEVCGLGN*LGRGPLHTLALISS Trigger: ACTGCTGATGAGAGCCAGGGTGTGGAGGGGACCCCGGCCGAGGCAGTTTCCGAGGCCACAAACTTCGAGGTTGATCAGTCTGTCTTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CCA 90 bp | CCTCGAGGATTTTGTGTAGCAGCTCGGGTACACCTTCCAGGGCCATaGACGTGTTGTGGTAGTCTCGGTGCTGCAGGACGGTGTACACCA | + |
|
Preference number: 5 (lower is better) Translates to: PRGFCVAARVHLPGP*TCCGSLGAAGRCTP Trigger: TGGTGTACACCGTCCTGCAGCACCGAGACTACCACAACACGTCCATGGCCCTGGAAGGTGTACCCGAGCTGCTACACAAAATCCTCGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CCA 90 bp | AGGATTCAGGGATTTCAAAGACAGACTGATCAACCTCGAAGTTTGTaGCCTCGGAAACTGCCTCGGCCGGGGTCCCCTCCACACCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RIQGFQRQTDQPRSL*PRKLPRPGSPPHPG Trigger: GCCAGGGTGTGGAGGGGACCCCGGCCGAGGCAGTTTCCGAGGCCACAAACTTCGAGGTTGATCAGTCTGTCTTTGAAATCCCTGAATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS GCA 90 bp | GTCACATCTGCTTTATGGCGCAGCAAGACTCGAGCAGATTCCAGATaGCCCAGAGAAACTGCAAGGTGCAGTAATGTCCGACCCCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VTSALWRSKTRADSR*PRETARCSNVRPRG Trigger: CCCCCGGGGTCGGACATTACTGCACCTTGCAGTTTCTCTGGGGCATCTGGAATCTGCTCGAGTCTTGCTGCGCCATAAAGCAGATGTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CCA 90 bp | CTGCTTTTTGGCTTCATCAGGTCCAGGGTGAGGCGCTCCATTTCTTaGGAAAGATCGAAGTGTTCGGTGGTGACCACGCGGTCATCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLFGFIRSRVRRSIS*ERSKCSVVTTRSSW Trigger: CCACGATGACCGCGTGGTCACCACCGAACACTTCGATCTTTCCCAAGAAATGGAGCGCCTCACCCTGGACCTGATGAAGCCAAAAAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS-3UTR CAA 90 bp | AAGCCAGGCTGTGCAGCTGGGTCTCCCCAGGCTGGAAATCCTAAGTGGGAGCAGAAGGGGATTTCTATTTaGACAGGGAATCCAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KPGCAAGSPQAGNPKWEQKGISI*TGNPGG Trigger: CCCTCCTGGATTCCCTGTCAAAATAGAAATCCCCTT...CTGCTCCCACTTAGGATTTCCAGCCTGGGGAGACCCAGCTGCACAGCCTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CCA 90 bp | TCTTGGGAAAGATCGAAGTGTTCGGTGGTGACCACGCGGTCATCGTaGTTGACCTCCATCAGCTCCGCCCAGTTGTCTCCTCCCTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SWERSKCSVVTTRSS*LTSISSAQLSPPLN Trigger: ATTTAAGGGAGGAGACAACTGGGCGGAGCTGATGGAGGTCAACCACGATGACCGCGTGGTCACCACCGAACACTTCGATCTTTCCCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS-3UTR CAA 90 bp | CAAGGTGCCCTCGGCTGTGTTCCCCAGGGGTTGGGCTGTTATGCAGTAGGTATTGAGGCGCTCCATTTCTaGGGAAAGATCGAAGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGALGCVPQGLGCYAVGIEALHF*GKIEVF Trigger: GAACACTTCGATCTTTCCCAAGAAATGGAGCGCCTC...AATACCTACTGCATAACAGCCCAACCCCTGGGGAACACAGCCGAGGGCACCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CAA 90 bp | TACCCACTCTACAAAGGCTGCTGTTCTCCTGTGGAAAAGCACCGTGACTCCGCACCCTGGCCGTTCTCTTaGGTCACATCTGCTTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: YPLYKGCCSPVEKHRDSAPWPFS*VTSALW Trigger: CCATAAAGCAGATGTGACCAAAGAGAACGGCCAGGG...TGCGGAGTCACGGTGCTTTTCCACAGGAGAACAGCAGCCTTTGTAGAGTGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS-3UTR CAA 90 bp | AAGCCAGGCTGTGCAGCTGGGTCTCCCCAGGCTGGAAATCCTAAGTGGGAGCAGGGAGGGAAGTCCAATTaGATGAAATCTCTCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: KPGCAAGSPQAGNPKWEQGGKSN*MKSLNL Trigger: CAGATTGAGAGATTTCATCAAATTGGACTTCCCTCC...CTGCTCCCACTTAGGATTTCCAGCCTGGGGAGACCCAGCTGCACAGCCTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CCA 90 bp | AAGACTGTCCATCCCTGGCCGTTCTCTTTGGTCACATCTGCTTTATaGCGCAGCAAGACTCGAGCAGATTCCAGATGCCCCAGAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: KTVHPWPFSLVTSAL*RSKTRADSRCPRET Trigger: AGTTTCTCTGGGGCATCTGGAATCTGCTCGAGTCTTGCTGCGCCATAAAGCAGATGTGACCAAAGAGAACGGCCAGGGATGGACAGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CCA 90 bp | TGCTCACAGCTTCGTGTAAGACTGTCCATCCCTGGCCGTTCTCTTTaGTCACATCTGCTTTATGGCGCAGCAAGACTCGAGCAGATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CSQLRVRLSIPGRSL*SHLLYGAARLEQIP Trigger: TGGAATCTGCTCGAGTCTTGCTGCGCCATAAAGCAGATGTGACCAAAGAGAACGGCCAGGGATGGACAGTCTTACACGAAGCTGTGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CCA 90 bp | TCTCTCAAAGGCAACGTTCTTAGTATCCAGGCTGGTGTTGATGACTaGGCTTGTCAGCCGCCTCTCCACCTCCCTGCTTTTTGGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLKGNVLSIQAGVDD*ACQPPLHLPAFWLH Trigger: ATGAAGCCAAAAAGCAGGGAGGTGGAGAGGCGGCTGACAAGCCCAGTCATCAACACCAGCCTGGATACTAAGAACGTTGCCTTTGAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS-3UTR CAA 90 bp | TACCCACTCTACAAAGGCTGCTGTTCTCCTGTGGAAAAGCACCGTGACTCCGCAGCAGTGCTACAGCCATaGACATTTCCGAATGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: YPLYKGCCSPVEKHRDSAAVLQP*TFPNVI Trigger: GATCACATTCGGAAATGTCAATGGCTGTAGCACTGC...TGCGGAGTCACGGTGCTTTTCCACAGGAGAACAGCAGCCTTTGTAGAGTGGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGAACGTCTCCAGCTCGTACCCACTCTACAAAGGCTGCTGTTCTCCTGTGTTTCTGCCATTGTCTaGAATGTGGTAGGATTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKERLQLVPTLQRLLFSCVSAIV*NVVGFR Trigger: CCTGAATCCTACCACATTCAAGACAATGGCAGAAAC...ACAGGAGAACAGCAGCCTTTGTAGAGTGGGTACGAGCTGGAGACGTTCCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
||
| CDS GCA 90 bp | GAGAGTGGGAACTCCTCGCACATCCACAGCGTAGCCTTAAACTTCTaGGTTCTAATTGTCAGCTCTTTTGGTCTTCCAATGTCCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESGNSSHIHSVALNF*VLIVSSFGLPMSLS Trigger: AGACAGGGACATTGGAAGACCAAAAGAGCTGACAATTAGAACGCAGAAGTTTAAGGCTACGCTGTGGATGTGCGAGGAGTTCCCACTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGAACATTTTACTGGCAACGCTGACTGTATCAAACAGACATTCCTGGGAAATGCGACAGACATCGTaGGGGCATATTCTAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: SQNILLATLTVSNRHSWEMRQTS*GHILDT Trigger: GGTGTCTAGAATATGCCCCAACGATGTCTGTCGCAT...TTCCCAGGAATGTCTGTTTGATACAGTCAGCGTTGCCAGTAAAATGTTCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
||
| CDS CAA 72 bp | TCCTCCTGGAGCCTGAGCTCCCGCTCCGCCAGCTCTTaGGCAGACAGCTCCATGGCCAGCTGCAGGTCGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SSWSLSSRSASS*ADSSMASCRSL Trigger: TAGCGACCTGCAGCTGGCCATGGAGCTGTCTGCCAAAGAGCTGGCGGAGCGGGAGCTCAGGCTCCAGGAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
||
| CDS CAA 90 bp | TCCGCTTCTTCCTCCTGGAGCCTGAGCTCCCGCTCCGCCAGCTCTTaGGCAGACAGCTCCATGGCCAGCTGCAGGTCGCTATCGAATCGG | + |
|
Preference number: 6 (lower is better) Translates to: SASSSWSLSSRSASS*ADSSMASCRSLSNR Trigger: CCGATTCGATAGCGACCTGCAGCTGGCCATGGAGCTGTCTGCCAAAGAGCTGGCGGAGCGGGAGCTCAGGCTCCAGGAGGAAGAAGCGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
||
| CDS TCA 72 bp | CCAGCTGCAGGTCGCTATCGAATCGGCTCGACTCGCTaGGGCCACCTGGGCACCTGCCCTCCATGTTGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: PAAGRYRIGSTR*GHLGTCPPCWL Trigger: TAACCAACATGGAGGGCAGGTGCCCAGGTGGCCTCAGCGAGTCGAGCCGATTCGATAGCGACCTGCAGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
||
| CDS TCA 72 bp | AGACTTGCTGGAGCTCCGCTTCTTCCTCCTGGAGCCTaGGCTCCCGCTCCGCCAGCTCTTTGGCAGACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RLAGAPLLPPGA*APAPPALWQTA Trigger: AGCTGTCTGCCAAAGAGCTGGCGGAGCGGGAGCTCAGGCTCCAGGAGGAAGAAGCGGAGCTCCAGCAAGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
||
| CDS GCA 72 bp | AGACTGATCAACCTCGAAGTTTGTGGCCTCGGAAACTaGCTCGGCCGGGGTCCCCTCCACACCCTGGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLINLEVCGLGN*LGRGPLHTLAL Trigger: GAGAGCCAGGGTGTGGAGGGGACCCCGGCCGAGGCAGTTTCCGAGGCCACAAACTTCGAGGTTGATCAGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS GCA 72 bp | GCTGCAGGACGGTGTACACCATCTCGGGATCGCCCGTaGTCACAGCTTCGTGTAAGACTGTCCATCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: AAGRCTPSRDRP*SQLRVRLSIPG Trigger: GCCAGGGATGGACAGTCTTACACGAAGCTGTGAGCACGGGCGATCCCGAGATGGTGTACACCGTCCTGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 72 bp | TCGAAGTGTTCGGTGGTGACCACGCGGTCATCGTGGTaGACCTCCATCAGCTCCGCCCAGTTGTCTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SKCSVVTTRSSW*TSISSAQLSPP Trigger: GGGAGGAGACAACTGGGCGGAGCTGATGGAGGTCAACCACGATGACCGCGTGGTCACCACCGAACACTTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 72 bp | GACTCGCTGAGGCCACCTGGGCACCTGCCCTCCATGTaGGTTAGGAGACTCTCCTGGATGGCCCTCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: DSLRPPGHLPSM*VRRLSWMALSY Trigger: GTATGAGAGGGCCATCCAGGAGAGTCTCCTAACCAACATGGAGGGCAGGTGCCCAGGTGGCCTCAGCGAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CAA 90 bp | GGCCGTGGGGTTGTTCACAGTGGCACACTCCGTAGCGAGGTCCCCTaGAGCACCAAACTGATGTTCCACGGTTCCGAGCAGAGACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GRGVVHSGTLRSEVP*STKLMFHGSEQRLQ Trigger: CTGGAGTCTCTGCTCGGAACCGTGGAACATCAGTTTGGTGCTCAAGGGGACCTCGCTACGGAGTGTGCCACTGTGAACAACCCCACGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CAA 90 bp | AATCGGCTCGACTCGCTGAGGCCACCTGGGCACCTGCCCTCCATGTaGGTTAGGAGACTCTCCTGGATGGCCCTCTCATACTGGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: NRLDSLRPPGHLPSM*VRRLSWMALSYWAS Trigger: TGAAGCCCAGTATGAGAGGGCCATCCAGGAGAGTCTCCTAACCAACATGGAGGGCAGGTGCCCAGGTGGCCTCAGCGAGTCGAGCCGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CCA 72 bp | TCGGAAACTGCCTCGGCCGGGGTCCCCTCCACACCCTaGCTCTCATCAGCAGTGCTACAGCCATTGACATTT | + |
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Preference number: 6 (lower is better) Translates to: SETASAGVPSTP*LSSAVLQPLTF Trigger: AAATGTCAATGGCTGTAGCACTGCTGATGAGAGCCAGGGTGTGGAGGGGACCCCGGCCGAGGCAGTTTCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 90 bp | CGTGGGGTTGTTCACAGTGGCACACTCCGTAGCGAGGTCCTGCCCTaGAGCACCAAACTGATGTTCCACGGTTCCGAGCAGAGACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RGVVHSGTLRSEVLP*STKLMFHGSEQRLQ Trigger: CTGGAGTCTCTGCTCGGAACCGTGGAACATCAGTTTGGTGCTCAAGGGCAGGACCTCGCTACGGAGTGTGCCACTGTGAACAACCCCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137519.2 |
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| CDS CCA 72 bp | TTTTGTGTAGCAGCTCGGGTACACCTTCCAGGGCCATaGACGTGTTGTGGTAGTCTCGGTGCTGCAGGACGG | + |
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Preference number: 6 (lower is better) Translates to: FCVAARVHLPGP*TCCGSLGAAGR Trigger: CCGTCCTGCAGCACCGAGACTACCACAACACGTCCATGGCCCTGGAAGGTGTACCCGAGCTGCTACACAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CCA 72 bp | AGATCGAAGTGTTCGGTGGTGACCACGCGGTCATCGTaGTTGACCTCCATCAGCTCCGCCCAGTTGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RSKCSVVTTRSS*LTSISSAQLSP Trigger: AGGAGACAACTGGGCGGAGCTGATGGAGGTCAACCACGATGACCGCGTGGTCACCACCGAACACTTCGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CCA 72 bp | GGCTTCATCAGGTCCAGGGTGAGGCGCTCCATTTCTTaGGAAAGATCGAAGTGTTCGGTGGTGACCACGCGG | + |
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Preference number: 6 (lower is better) Translates to: GFIRSRVRRSIS*ERSKCSVVTTR Trigger: CCGCGTGGTCACCACCGAACACTTCGATCTTTCCCAAGAAATGGAGCGCCTCACCCTGGACCTGATGAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 72 bp | GTTCACAGTGGCACACTCCGTAGCGAGGTCCTGCCCTaGAGCACCAAACTGATGTTCCACGGTTCCGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: VHSGTLRSEVLP*STKLMFHGSEQ Trigger: CTGCTCGGAACCGTGGAACATCAGTTTGGTGCTCAAGGGCAGGACCTCGCTACGGAGTGTGCCACTGTGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137519.2 |
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| CDS CAA 90 bp | GGTAGGATTCAGGGATTTCAAAGACAGACTGATCAACCTCGAAGTTaGTGGCCTCGGAAACTGCCTCGGCCGGGGTCCCCTCCACACCCT | + |
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Preference number: 6 (lower is better) Translates to: GRIQGFQRQTDQPRS*WPRKLPRPGSPPHP Trigger: AGGGTGTGGAGGGGACCCCGGCCGAGGCAGTTTCCGAGGCCACAAACTTCGAGGTTGATCAGTCTGTCTTTGAAATCCCTGAATCCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CCA 72 bp | GGATTTCAAAGACAGACTGATCAACCTCGAAGTTTGTaGCCTCGGAAACTGCCTCGGCCGGGGTCCCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GFQRQTDQPRSL*PRKLPRPGSPP Trigger: TGGAGGGGACCCCGGCCGAGGCAGTTTCCGAGGCCACAAACTTCGAGGTTGATCAGTCTGTCTTTGAAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 72 bp | TGGCTTCATCAGGTCCAGGGTGAGGCGCTCCATTTCTaGGGAAAGATCGAAGTGTTCGGTGGTGACCACGCG | + |
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Preference number: 6 (lower is better) Translates to: WLHQVQGEALHF*GKIEVFGGDHA Trigger: CGCGTGGTCACCACCGAACACTTCGATCTTTCCCAAGAAATGGAGCGCCTCACCCTGGACCTGATGAAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 72 bp | CAGGGATTTCAAAGACAGACTGATCAACCTCGAAGTTaGTGGCCTCGGAAACTGCCTCGGCCGGGGTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: QGFQRQTDQPRS*WPRKLPRPGSP Trigger: AGGGGACCCCGGCCGAGGCAGTTTCCGAGGCCACAAACTTCGAGGTTGATCAGTCTGTCTTTGAAATCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 90 bp | CCTGCTTTTTGGCTTCATCAGGTCCAGGGTGAGGCGCTCCATTTCTaGGGAAAGATCGAAGTGTTCGGTGGTGACCACGCGGTCATCGTG | + |
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Preference number: 6 (lower is better) Translates to: PAFWLHQVQGEALHF*GKIEVFGGDHAVIV Trigger: CACGATGACCGCGTGGTCACCACCGAACACTTCGATCTTTCCCAAGAAATGGAGCGCCTCACCCTGGACCTGATGAAGCCAAAAAGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS TCA 72 bp | TCAGGTCAAAGTCTTCGTCAAAGTACTCGTCGGGAGTaGTGGCCGTGGGGTTGTTCACAGTGGCACACTCCG | + |
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Preference number: 6 (lower is better) Translates to: SGQSLRQSTRRE*WPWGCSQWHTP Trigger: CGGAGTGTGCCACTGTGAACAACCCCACGGCCATCACTCCCGACGAGTACTTTGACGAAGACTTTGACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CCA 72 bp | GGCAACGTTCTTAGTATCCAGGCTGGTGTTGATGACTaGGCTTGTCAGCCGCCTCTCCACCTCCCTGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: GNVLSIQAGVDD*ACQPPLHLPAF Trigger: AAAAGCAGGGAGGTGGAGAGGCGGCTGACAAGCCCAGTCATCAACACCAGCCTGGATACTAAGAACGTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 72 bp | GTTCCGAGCAGAGACTCCAGTGGATTCCGGTCCTCTTaGTATCGCTTCTTCTCCTCCTCCGTTAGGTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: VPSRDSSGFRSS*YRFFSSSVRCS Trigger: CGAGCACCTAACGGAGGAGGAGAAGAAGCGATACAAAGAGGACCGGAATCCACTGGAGTCTCTGCTCGGAAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 90 bp | TGGGAAAGATCGAAGTGTTCGGTGGTGACCACGCGGTCATCGTGGTaGACCTCCATCAGCTCCGCCCAGTTGTCTCCTCCCTTAAATATG | + |
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Preference number: 6 (lower is better) Translates to: WERSKCSVVTTRSSW*TSISSAQLSPPLNM Trigger: CATATTTAAGGGAGGAGACAACTGGGCGGAGCTGATGGAGGTCAACCACGATGACCGCGTGGTCACCACCGAACACTTCGATCTTTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS GCA 72 bp | GACTGTCCATCCCTGGCCGTTCTCTTTGGTCACATCTaGTTTATGGCGCAGCAAGACTCGAGCAGATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: DCPSLAVLFGHI*FMAQQDSSRFQ Trigger: CTGGAATCTGCTCGAGTCTTGCTGCGCCATAAAGCAGATGTGACCAAAGAGAACGGCCAGGGATGGACAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CAA 90 bp | GTGCTCACAGCTTCGTGTAAGACTGTCCATCCCTGGCCGTTCTCTTaGGTCACATCTGCTTTATGGCGCAGCAAGACTCGAGCAGATTCC | + |
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Preference number: 6 (lower is better) Translates to: VLTASCKTVHPWPFS*VTSALWRSKTRADS Trigger: GGAATCTGCTCGAGTCTTGCTGCGCCATAAAGCAGATGTGACCAAAGAGAACGGCCAGGGATGGACAGTCTTACACGAAGCTGTGAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CAA 90 bp | GGGGTCCCCTCCACACCCTGGCTCTCATCAGCAGTGCTACAGCCATaGACATTTCCGAATGTGATCCGTGCGTTTAAGACGTGGAATAAG | + |
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Preference number: 6 (lower is better) Translates to: GVPSTPWLSSAVLQP*TFPNVIRAFKTWNK Trigger: CTTATTCCACGTCTTAAACGCACGGATCACATTCGGAAATGTCAATGGCTGTAGCACTGCTGATGAGAGCCAGGGTGTGGAGGGGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS GCA 72 bp | GCTTTATGGCGCAGCAAGACTCGAGCAGATTCCAGATaGCCCAGAGAAACTGCAAGGTGCAGTAATGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: ALWRSKTRADSR*PRETARCSNVR Trigger: TCGGACATTACTGCACCTTGCAGTTTCTCTGGGGCATCTGGAATCTGCTCGAGTCTTGCTGCGCCATAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CCA 72 bp | CTTCGTGTAAGACTGTCCATCCCTGGCCGTTCTCTTTaGTCACATCTGCTTTATGGCGCAGCAAGACTCGAG | + |
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Preference number: 6 (lower is better) Translates to: LRVRLSIPGRSL*SHLLYGAARLE Trigger: CTCGAGTCTTGCTGCGCCATAAAGCAGATGTGACCAAAGAGAACGGCCAGGGATGGACAGTCTTACACGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102578.11 |
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| CDS CAA 72 bp | TTTTCAAACCCCAGCAAGGTGATGTCCACGCGCAGCTaGGCTCCACTCTTCCATATGCGACAGACATCGTTG | + |
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Preference number: 6 (lower is better) Translates to: FSNPSKVMSTRS*APLFHMRQTSL Trigger: CAACGATGTCTGTCGCATATGGAAGAGTGGAGCCAAGCTGCGCGTGGACATCACCTTGCTGGGGTTTGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 72 bp | TCCACACCCTGGCTCTCATCAGCAGTGCTACAGCCATaGACATTTCCGAATGTGATCCGTGCGTTTAAGACG | + |
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Preference number: 6 (lower is better) Translates to: STPWLSSAVLQP*TFPNVIRAFKT Trigger: CGTCTTAAACGCACGGATCACATTCGGAAATGTCAATGGCTGTAGCACTGCTGATGAGAGCCAGGGTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 90 bp | GATTTAGTTCTCTCAAAGGCAACGTTCTTAGTATCCAGGCTGGTGTaGATGACTGGGCTTGTCAGCCGCCTCTCCACCTCCCTGCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: DLVLSKATFLVSRLV*MTGLVSRLSTSLLF Trigger: AAAAAGCAGGGAGGTGGAGAGGCGGCTGACAAGCCCAGTCATCAACACCAGCCTGGATACTAAGAACGTTGCCTTTGAGAGAACTAAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 72 bp | CTGGATGGCAAACTGCATGATCTCATAGTCTTCGTCTaGCAGGTGCACGTTTCTGCCATTGTCTTGAATGTG | + |
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Preference number: 6 (lower is better) Translates to: LDGKLHDLIVFV*QVHVSAIVLNV Trigger: CACATTCAAGACAATGGCAGAAACGTGCACCTGCAAGACGAAGACTATGAGATCATGCAGTTTGCCATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 90 bp | GATCTCATAGTCTTCGTCTTGCAGGTGCACGTTTCTGCCATTGTCTaGAATGTGGTAGGATTCAGGGATTTCAAAGACAGACTGATCAAC | + |
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Preference number: 6 (lower is better) Translates to: DLIVFVLQVHVSAIV*NVVGFRDFKDRLIN Trigger: GTTGATCAGTCTGTCTTTGAAATCCCTGAATCCTACCACATTCAAGACAATGGCAGAAACGTGCACCTGCAAGACGAAGACTATGAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 72 bp | CGTGCGTTTAAGACGTGGAATAAGGGGATTTCTATTTaGACAGGGAATCCAGGAGGGAAGTCCAATTTGATG | + |
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Preference number: 6 (lower is better) Translates to: RAFKTWNKGISI*TGNPGGKSNLM Trigger: CATCAAATTGGACTTCCCTCCTGGATTCCCTGTCAAAATAGAAATCCCCTTATTCCACGTCTTAAACGCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CAA 90 bp | AATGTGATCCGTGCGTTTAAGACGTGGAATAAGGGGATTTCTATTTaGACAGGGAATCCAGGAGGGAAGTCCAATTTGATGAAATCTCTC | + |
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Preference number: 6 (lower is better) Translates to: NVIRAFKTWNKGISI*TGNPGGKSNLMKSL Trigger: GAGAGATTTCATCAAATTGGACTTCCCTCCTGGATTCCCTGTCAAAATAGAAATCCCCTTATTCCACGTCTTAAACGCACGGATCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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| CDS CCA 72 bp | TTGACATTTCCGAATGTGATCCGTGCGTTTAAGACGTaGAATAAGGGGATTTCTATTTTGACAGGGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: LTFPNVIRAFKT*NKGISILTGNP Trigger: TGGATTCCCTGTCAAAATAGAAATCCCCTTATTCCACGTCTTAAACGCACGGATCACATTCGGAAATGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102578.11 ENSMUST00000137519.2 |
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