RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035569

Ensembl transcript IDs: ENSMUST00000098333.5, ENSMUST00000098334.13, ENSMUST00000172906.8, ENSMUST00000212050.2, ENSMUST00000212937.2

Found 512 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCTGGGGGCTCAGAGAAGGAGACTTCCAGGAGCGTGCTCAGGCTaGGCTCCTGGCCGTGGTCCGCAAAGCTGTCCGAGGAGACCTCGC +
Preference number: 1 (lower is better)
Translates to: LLGAQRRRLPGACSG*APGRGPQSCPRRPR
Trigger: GCGAGGTCTCCTCGGACAGCTTTGCGGACCACGGCCAGGAGCCCAGCCTGAGCACGCTCCTGGAAGTCTCCTTCTCTGAGCCCCCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp CCTTGTCCTCTGCTGGGGGCTCAGAGAAGGAGACTTCCAGGAGCGTaGTCAGGCTGGGCTCCTGGCCGTGGTCCGCAAAGCTGTCCGAGG +
Preference number: 1 (lower is better)
Translates to: PCPLLGAQRRRLPGA*SGWAPGRGPQSCPR
Trigger: CCTCGGACAGCTTTGCGGACCACGGCCAGGAGCCCAGCCTGAGCACGCTCCTGGAAGTCTCCTTCTCTGAGCCCCCAGCAGAGGACAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp GGGTGTTCTCGTCCTTCCTCCTTTTCTGGGAGGCCGTCCACTCGCTaGGTGTCGCTGGCCTCTGTGGCCTTGAAGCTGCCGGCCACGCAA +
Preference number: 1 (lower is better)
Translates to: GCSRPSSFSGRPSTR*VSLASVALKLPATQ
Trigger: TTGCGTGGCCGGCAGCTTCAAGGCCACAGAGGCCAGCGACACCCAGCGAGTGGACGGCCTCCCAGAAAAGGAGGAAGGACGAGAACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp CCCCTCGGCCGCAGCCACAACACAGGAGGCCTCTGCACTGTTGTGTaGCTGTGCCAAGCCATCTGTGGTGGGTCCATCAGGTGCACAGCA +
Preference number: 1 (lower is better)
Translates to: PLGRSHNTGGLCTVV*LCQAICGGSIRCTA
Trigger: TGCTGTGCACCTGATGGACCCACCACAGATGGCTTGGCACAGGCACACAACAGTGCAGAGGCCTCCTGTGTTGTGGCTGCGGCCGAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp CAGTTTCTCGGAGAGGCAGGCACTGTCCCTGGCCTTGTCCTCTGCTaGGGGCTCAGAGAAGGAGACTTCCAGGAGCGTGCTCAGGCTGGG +
Preference number: 1 (lower is better)
Translates to: QFLGEAGTVPGLVLC*GLREGDFQERAQAG
Trigger: CCCAGCCTGAGCACGCTCCTGGAAGTCTCCTTCTCTGAGCCCCCAGCAGAGGACAAGGCCAGGGACAGTGCCTGCCTCTCCGAGAAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 90 bp GGGACCTCAGATGTAGGCTTGGGCTCTGGATCTGTAGCTTCTGCTTaGACGTTGCCTGGGGGCCCCTCGGCCGCAGCCACAACACAGGAG +
Preference number: 1 (lower is better)
Translates to: GTSDVGLGSGSVASA*TLPGGPSAAATTQE
Trigger: CTCCTGTGTTGTGGCTGCGGCCGAGGGGCCCCCAGGCAACGTTCAAGCAGAAGCTACAGATCCAGAGCCCAAGCCTACATCTGAGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp GGCCGCAGCCACAACACAGGAGGCCTCTGCACTGTTGTGTGCCTGTaGCAAGCCATCTGTGGTGGGTCCATCAGGTGCACAGCAGGGAGT +
Preference number: 1 (lower is better)
Translates to: GRSHNTGGLCTVVCL*QAICGGSIRCTAGS
Trigger: ACTCCCTGCTGTGCACCTGATGGACCCACCACAGATGGCTTGGCACAGGCACACAACAGTGCAGAGGCCTCCTGTGTTGTGGCTGCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp CCTCCTCCGCTGCCGGGACTCATCGGCAGCACTGGGCGACCTATGTaGCCCTTGTTTGTGTCCTGTGACCTTCCTCCGAGTGTCATGCTG +
Preference number: 1 (lower is better)
Translates to: PPPLPGLIGSTGRPM*PLFVSCDLPPSVML
Trigger: CAGCATGACACTCGGAGGAAGGTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCCCGGCAGCGGAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp GGCCGGCAAAGGGTAAGATCCTGGAGAGACAGGGTAGGTGGGCTCTaGAGCACTGTAGGGTCCTGGGGTGGTGGAATGGAGGGATTCTCC +
Preference number: 1 (lower is better)
Translates to: GRQRVRSWRDRVGGL*STVGSWGGGMEGFS
Trigger: GGAGAATCCCTCCATTCCACCACCCCAGGACCCTACAGTGCTGCAGAGCCCACCTACCCTGTCTCTCCAGGATCTTACCCTTTGCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp TCCTTGAAGCTGCTCTCGAACCCACACTCCTTTAGGTCCTCCCTGTaGACTTCTTCAGACCGAATCCGCCCATCCCTCCTGTCCCGGCCC +
Preference number: 1 (lower is better)
Translates to: SLKLLSNPHSFRSSL*TSSDRIRPSLLSRP
Trigger: GGGCCGGGACAGGAGGGATGGGCGGATTCGGTCTGAAGAAGTGCACAGGGAGGACCTAAAGGAGTGTGGGTTCGAGAGCAGCTTCAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp TCGACATCGGGGCCTCGGGAAGGCTTCCGCTCCCTCTCCCGGGAGTaGTCCTTCTCTGGCTTCTCCTTGTGTTTACTCTTCACCTTGTCC +
Preference number: 1 (lower is better)
Translates to: STSGPREGFRSLSRE*SFSGFSLCLLFTLS
Trigger: GGACAAGGTGAAGAGTAAACACAAGGAGAAGCCAGAGAAGGAGCACTCCCGGGAGAGGGAGCGGAAGCCTTCCCGAGGCCCCGATGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp CTTAGGGACCTCAGATGTAGGCTTGGGCTCTGGATCTGTAGCTTCTaGTTGAACGTTGCCTGGGGGCCCCTCGGCCGCAGCCACAACACA +
Preference number: 1 (lower is better)
Translates to: LRDLRCRLGLWICSF*LNVAWGPLGRSHNT
Trigger: TGTGTTGTGGCTGCGGCCGAGGGGCCCCCAGGCAACGTTCAAGCAGAAGCTACAGATCCAGAGCCCAAGCCTACATCTGAGGTCCCTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp CTCACTGATGAGTTCCTTGATGCGCCGGGCATCCCCTCGGATAGCTaGTCGGTGCAGGCGGGTCTCTCCGCGTTCATTTCTCTTGTTCAC +
Preference number: 1 (lower is better)
Translates to: LTDEFLDAPGIPSDS*SVQAGLSAFISLVH
Trigger: GTGAACAAGAGAAATGAACGCGGAGAGACCCGCCTGCACCGAGCAGCTATCCGAGGGGATGCCCGGCGCATCAAGGAACTCATCAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp GAAGAAAACCCAGAGGGCATGGCTGACACAGAGCCACCTTGTCTGTaGCCACGGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTG +
Preference number: 1 (lower is better)
Translates to: EENPEGMADTEPPCL*PRSPCPKAWQSSAV
Trigger: CACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGTTTTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR CCA 90 bp AGGAGGCCTCTGCACTGTTGTGTGCCTGTGCCAAGCCATCTGTGGTaGGTCCATCAGGTGCACAGCAGGGAGTGGCAGAAGGATCTTCAG +
Preference number: 1 (lower is better)
Translates to: RRPLHCCVPVPSHLW*VHQVHSREWQKDLQ
Trigger: CTGAAGATCCTTCTGCCACTCCCTGCTGTGCACCTGATGGACCCACCACAGATGGCTTGGCACAGGCACACAACAGTGCAGAGGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp CACAGGAGGCCTCTGCACTGTTGTGTGCCTGTGCCAAGCCATCTGTaGTGGGTCCATCAGGTGCACAGCAGGGAGTGGCAGAAGGATCTT +
Preference number: 1 (lower is better)
Translates to: HRRPLHCCVPVPSHL*WVHQVHSREWQKDL
Trigger: AAGATCCTTCTGCCACTCCCTGCTGTGCACCTGATGGACCCACCACAGATGGCTTGGCACAGGCACACAACAGTGCAGAGGCCTCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp CTTCCTTCGGGGACTTGTCCTTCGTGGCCCTCTCCCTCTCTGCTTTaGTGGCACGGTCTTTGTCTTCCCGGAAGGCTCTGCTCATGTCTT +
Preference number: 1 (lower is better)
Translates to: LPSGTCPSWPSPSLL*WHGLCLPGRLCSCL
Trigger: AAGACATGAGCAGAGCCTTCCGGGAAGACAAAGACCGTGCCAGCAAAGCAGAGAGGGAGAGGGCCACGAAGGACAAGTCCCCGAAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp CCCACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTaGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCA +
Preference number: 1 (lower is better)
Translates to: PTATGKRRCFLPHCI*RGDTRPGAVSGLLP
Trigger: TGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR CCA 90 bp CCTTCGGGGACTTGTCCTTCGTGGCCCTCTCCCTCTCTGCTTTGCTaGCACGGTCTTTGTCTTCCCGGAAGGCTCTGCTCATGTCTTTGT +
Preference number: 1 (lower is better)
Translates to: PSGTCPSWPSPSLLC*HGLCLPGRLCSCLC
Trigger: ACAAAGACATGAGCAGAGCCTTCCGGGAAGACAAAGACCGTGCCAGCAAAGCAGAGAGGGAGAGGGCCACGAAGGACAAGTCCCCGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp GGAGGGTTGTCCTTGTCTTTGGCTGCAGGCTTTGGCTCGTCCTTGTaGTGTCTCAGGAAGCCGTCCACATGCTTGTCCCTGTGTCTCTCC +
Preference number: 1 (lower is better)
Translates to: GGLSLSLAAGFGSSL*CLRKPSTCLSLCLS
Trigger: GGAGAGACACAGGGACAAGCATGTGGACGGCTTCCTGAGACACCACAAGGACGAGCCAAAGCCTGCAGCCAAAGACAAGGACAACCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp GTGCCAAGCCATCTGTGGTGGGTCCATCAGGTGCACAGCAGGGAGTaGCAGAAGGATCTTCAGTTTCAGCTTCTTCATCGCCACCTCCCG +
Preference number: 1 (lower is better)
Translates to: VPSHLWWVHQVHSRE*QKDLQFQLLHRHLP
Trigger: CGGGAGGTGGCGATGAAGAAGCTGAAACTGAAGATCCTTCTGCCACTCCCTGCTGTGCACCTGATGGACCCACCACAGATGGCTTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 90 bp CTCAGAGTCTGTGTTATTGCCATCGACGGAGCTGGAAGGTGCGAATaGCGGGGCGTCCTCTTCTTCCGAGCTCTCAGTAGAGCTCTCCTC +
Preference number: 1 (lower is better)
Translates to: LRVCVIAIDGAGRCE*RGVLFFRALSRALL
Trigger: GAGGAGAGCTCTACTGAGAGCTCGGAAGAAGAGGACGCCCCGTCATTCGCACCTTCCAGCTCCGTCGATGGCAATAACACAGACTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp GCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATaGTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGT +
Preference number: 1 (lower is better)
Translates to: AVSGPCAPTATGKRR*FLPHCIWRGDTRPG
Trigger: ACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR GCA 90 bp GGACTTCTCCTTGAAGGAGTTGGGAGGGTTGTCCTTGTCTTTGGCTaGAGGCTTTGGCTCGTCCTTGTGGTGTCTCAGGAAGCCGTCCAC +
Preference number: 1 (lower is better)
Translates to: GLLLEGVGRVVLVFG*RLWLVLVVSQEAVH
Trigger: GTGGACGGCTTCCTGAGACACCACAAGGACGAGCCAAAGCCTGCAGCCAAAGACAAGGACAACCCTCCCAACTCCTTCAAGGAGAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp TCCTGGAGAGACAGGGTAGGTGGGCTCTGCAGCACTGTAGGGTCCTaGGGTGGTGGAATGGAGGGATTCTCCAGGGCAAAAATGTTTTGG +
Preference number: 1 (lower is better)
Translates to: SWRDRVGGLCSTVGS*GGGMEGFSRAKMFW
Trigger: CCAAAACATTTTTGCCCTGGAGAATCCCTCCATTCCACCACCCCAGGACCCTACAGTGCTGCAGAGCCCACCTACCCTGTCTCTCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp GGCCTTTCTCAAACTCAGAGTCTGTGTTATTGCCATCGACGGAGCTaGAAGGTGCGAATGACGGGGCGTCCTCTTCTTCCGAGCTCTCAG +
Preference number: 1 (lower is better)
Translates to: GLSQTQSLCYCHRRS*KVRMTGRPLLPSSQ
Trigger: CTGAGAGCTCGGAAGAAGAGGACGCCCCGTCATTCGCACCTTCCAGCTCCGTCGATGGCAATAACACAGACTCTGAGTTTGAGAAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp CTTGAAGGAGTTGGGAGGGTTGTCCTTGTCTTTGGCTGCAGGCTTTaGCTCGTCCTTGTGGTGTCTCAGGAAGCCGTCCACATGCTTGTC +
Preference number: 1 (lower is better)
Translates to: LEGVGRVVLVFGCRL*LVLVVSQEAVHMLV
Trigger: GACAAGCATGTGGACGGCTTCCTGAGACACCACAAGGACGAGCCAAAGCCTGCAGCCAAAGACAAGGACAACCCTCCCAACTCCTTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp TCTAATCTTGACTATGCTGCCTCTCTCCCCGAGACTCTGACCTTCTaGGCAGGCTCAGTACCCGAGAACAGGGGCTCAGTAGCCACTCAT +
Preference number: 1 (lower is better)
Translates to: SNLDYAASLPETLTF*AGSVPENRGSVATH
Trigger: ATGAGTGGCTACTGAGCCCCTGTTCTCGGGTACTGAGCCTGCCCAGAAGGTCAGAGTCTCGGGGAGAGAGGCAGCATAGTCAAGATTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR TCA 90 bp AGCTGCCGGCCACGCAATCGTCCTTCTCGTCCTCGCTCTCATCTGTaGAAATGTCTGCAATGTACCAGCTCTTCTCCTTCCCCTTCCTGT +
Preference number: 1 (lower is better)
Translates to: SCRPRNRPSRPRSHL*KCLQCTSSSPSPSC
Trigger: ACAGGAAGGGGAAGGAGAAGAGCTGGTACATTGCAGACATTTTCACAGATGAGAGCGAGGACGAGAAGGACGATTGCGTGGCCGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp TTCTTCAGACCGAATCCGCCCATCCCTCCTGTCCCGGCCCCCTTCTaGAGACTCTCGCCTTTTCTTGTCTTTCTCAGAAAGATAGCTAGG +
Preference number: 1 (lower is better)
Translates to: FFRPNPPIPPVPAPF*RLSPFLVFLRKIAR
Trigger: CCTAGCTATCTTTCTGAGAAAGACAAGAAAAGGCGAGAGTCTGCAGAAGGGGGCCGGGACAGGAGGGATGGGCGGATTCGGTCTGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp TTCTTCTTTTCCTTGGGCTCTTTGTCTCTTGGCTTCTCTGTGTGCTaGCTGTCAGAAGAGGACTTCCGGTGCCTGTCCGAGGGGTGTTCT +
Preference number: 1 (lower is better)
Translates to: FFFSLGSLSLGFSVC*LSEEDFRCLSEGCS
Trigger: AGAACACCCCTCGGACAGGCACCGGAAGTCCTCTTCTGACAGGCAGCACACAGAGAAGCCAAGAGACAAAGAGCCCAAGGAAAAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp CTTTCTTGCCGGAGTCTCTGGATGGCACAAGTTTGTCGTTCCCGTTaGTCATCTTTATGGAGTCGCCCTTTTCTCGCTCTGTGTTCTCCT +
Preference number: 1 (lower is better)
Translates to: LSCRSLWMAQVCRSR*SSLWSRPFLALCSP
Trigger: AGGAGAACACAGAGCGAGAAAAGGGCGACTCCATAAAGATGAGCAACGGGAACGACAAACTTGTGCCATCCAGAGACTCCGGCAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp TGGCTCGTTCCTTCAGTGTGTGGGCTGTTGTCAGAATTTGGTTCCTaGAGTGCTGGGACCAAAGACCTATTCCTGATGTCTGTCGTTAGC +
Preference number: 1 (lower is better)
Translates to: WLVPSVCGLLSEFGS*SAGTKDLFLMSVVS
Trigger: GCTAACGACAGACATCAGGAATAGGTCTTTGGTCCCAGCACTGCAGGAACCAAATTCTGACAACAGCCCACACACTGAAGGAACGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR CCA 90 bp AAACTCGTACTCATCCTTGACGGGGGTCACAGTCTTCTGGGGCTCTaGGTTCTTAGCCTTAAGCTTGAGGCCTTTCTCAAACTCAGAGTC +
Preference number: 1 (lower is better)
Translates to: KLVLILDGGHSLLGL*VLSLKLEAFLKLRV
Trigger: GACTCTGAGTTTGAGAAAGGCCTCAAGCTTAAGGCTAAGAACCCAGAGCCCCAGAAGACTGTGACCCCCGTCAAGGATGAGTACGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp TCCTCATCAAACTCGTACTCATCCTTGACGGGGGTCACAGTCTTCTaGGGCTCTGGGTTCTTAGCCTTAAGCTTGAGGCCTTTCTCAAAC +
Preference number: 1 (lower is better)
Translates to: SSSNSYSSLTGVTVF*GSGFLALSLRPFSN
Trigger: GTTTGAGAAAGGCCTCAAGCTTAAGGCTAAGAACCCAGAGCCCCAGAAGACTGTGACCCCCGTCAAGGATGAGTACGAGTTTGATGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 90 bp ATGCAGTCAGAAGAGCCAGCACTACACAGTCACTGCAGTGCTGTTTaGGAGTTATCAAAACTCAGGTTATCTGGGTACTGGCCTAGGGCA +
Preference number: 1 (lower is better)
Translates to: MQSEEPALHSHCSAV*ELSKLRLSGYWPRA
Trigger: TGCCCTAGGCCAGTACCCAGATAACCTGAGTTTTGATAACTCGCAAACAGCACTGCAGTGACTGTGTAGTGCTGGCTCTTCTGACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR CCA 90 bp TCTGACACTTGTCAAGGGTGGACTTGTCACTTCTCTCCCTCTCGCTaGACTTCTCTTTGTACTTGTCTGCCCTGCCCTTTTCCTTCCTTT +
Preference number: 1 (lower is better)
Translates to: SDTCQGWTCHFSPSR*TSLCTCLPCPFPSF
Trigger: AAAGGAAGGAAAAGGGCAGGGCAGACAAGTACAAAGAGAAGTCCAGCGAGAGGGAGAGAAGTGACAAGTCCACCCTTGACAAGTGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp ACAACTCAATGGCCTTATCCAGCTCCTCCTCCACGTCAGCTTTTGTaGGGTAAGAAACCCCGTAAGTCTCTGCATCCAGGAAGTCTTTCT +
Preference number: 1 (lower is better)
Translates to: TTQWPYPAPPPRQLL*GKKPRKSLHPGSLS
Trigger: AGAAAGACTTCCTGGATGCAGAGACTTACGGGGTTTCTTACCCCACAAAAGCTGACGTGGAGGAGGAGCTGGATAAGGCCATTGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp TGTATGTGCCTTTGCCTAACAGGAGGTTCACCATCGTTGGCGAATTaGCTACTTTCAACGGTGTCTCTCCTTTTCTGTTGCTTTGTTGAG +
Preference number: 1 (lower is better)
Translates to: CMCLCLTGGSPSLAN*LLSTVSLLFCCFVE
Trigger: CTCAACAAAGCAACAGAAAAGGAGAGACACCGTTGAAAGTAGCCAATTCGCCAACGATGGTGAACCTCCTGTTAGGCAAAGGCACATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 90 bp AAATCAAAAGAGGAATCAGACAGGTCAGAAAACCACCTCTCTTGTTaGTCATCAGAGAGGCTGAACTTGGTGTCCTCATGGTCCAGAAAC +
Preference number: 1 (lower is better)
Translates to: KSKEESDRSENHLSC*SSERLNLVSSWSRN
Trigger: GTTTCTGGACCATGAGGACACCAAGTTCAGCCTCTCTGATGACCAACAAGAGAGGTGGTTTTCTGACCTGTCTGATTCCTCTTTTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp CCCCGTGGGGCCTGGAGGGCTCTCCGCCGGAGGAACAGGACTGGCCTTTGCGGCAGCAGAGATGGCCACTaGGATTGCTCCTGTCCCACC +
Preference number: 2 (lower is better)
Translates to: PRGAWRALRRRNRTGLCGSRDGH*DCSCPT
Trigger: GGTGGGACAGGAGCAATCCCAGTGGCCATCTCTGCT...GCCGCAAAGGCCAGTCCTGTTCCTCCGGCGGAGAGCCCTCCAGGCCCCACGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp GGGGGCCCCTCGGCCGCAGCCACAACACAGGAGGCCTCTGCACTGTaGTGTGCCTGTGCCAAGCCATCTGTGGTGGGTCCATCAGGTGCA +
Preference number: 2 (lower is better)
Translates to: GGPSAAATTQEASAL*CACAKPSVVGPSGA
Trigger: TGCACCTGATGGACCCACCACAGATGGCTTGGCACAGGCACACAACAGTGCAGAGGCCTCCTGTGTTGTGGCTGCGGCCGAGGGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp CTGCAGCTGCTGACTAGACCGCTGGAAGCGCCGCTTGCGGGGATGTaGGGCCTGGGCATCTTCCTCCTCAGAGGCTCGACCCTTGGCTCT +
Preference number: 2 (lower is better)
Translates to: LQLLTRPLEAPLAGM*GLGIFLLRGSTLGS
Trigger: AGAGCCAAGGGTCGAGCCTCTGAGGAGGAAGATGCCCAGGCCCAACATCCCCGCAAGCGGCGCTTCCAGCGGTCTAGTCAGCAGCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp GCAAAGTCCTTGACGTTCACGTCCGCGCCCTCACTGATGAGTTCCTaGATGCGCCGGGCATCCCCTCGGATAGCTGCTCGGTGCAGGCGG +
Preference number: 2 (lower is better)
Translates to: AKSLTFTSAPSLMSS*MRRASPRIAARCRR
Trigger: CCGCCTGCACCGAGCAGCTATCCGAGGGGATGCCCGGCGCATCAAGGAACTCATCAGTGAGGGCGCGGACGTGAACGTCAAGGACTTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR TCA 90 bp GTGGGGCCTGGAGGGCTCTCCGCCGGAGGAACAGGACTGGCCTTTGCGGCTTCTCCCTGGACTTCTCCTTaGAGGAGTTGGGAGGGTTGT +
Preference number: 2 (lower is better)
Translates to: VGPGGLSAGGTGLAFAASPWTSP*RSWEGC
Trigger: ACAACCCTCCCAACTCCTTCAAGGAGAAGTCCAGGG...AGAAGCCGCAAAGGCCAGTCCTGTTCCTCCGGCGGAGAGCCCTCCAGGCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp GAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGTCCCAGACACACGGCCAGGTaGAGTCTCTGGGCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: EGMADTEPPCLWPRSPCPRHTAR*SLWAPP
Trigger: GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCT...GGGACAAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR CAA 90 bp GTGGGAGCCGGCTCCTTGACCTTTTTGTCCAGCCCCAGAGCCTTCTaGGAAGGAAAGTCCAGGCTCTTCTTGCGCCCGTCCTCCGTGGGC +
Preference number: 2 (lower is better)
Translates to: VGAGSLTFLSSPRAF*EGKSRLFLRPSSVG
Trigger: GCCCACGGAGGACGGGCGCAAGAAGAGCCTGGACTTTCCTTCCAAGAAGGCTCTGGGGCTGGACAAAAAGGTCAAGGAGCCGGCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp CCCCGGTTACACGCCTCGTGCAGTGCAGTCCAGCCTGCAAAGTCCTaGACGTTCACGTCCGCGCCCTCACTGATGAGTTCCTTGATGCGC +
Preference number: 2 (lower is better)
Translates to: PRLHASCSAVQPAKS*TFTSAPSLMSSLMR
Trigger: GCGCATCAAGGAACTCATCAGTGAGGGCGCGGACGTGAACGTCAAGGACTTTGCAGGCTGGACTGCACTGCACGAGGCGTGTAACCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp TCCTTCTCCCTCAGTTTCTCGGAGAGGCAGGCACTGTCCCTGGCCTaGTCCTCTGCTGGGGGCTCAGAGAAGGAGACTTCCAGGAGCGTG +
Preference number: 2 (lower is better)
Translates to: SFSLSFSERQALSLA*SSAGGSEKETSRSV
Trigger: CACGCTCCTGGAAGTCTCCTTCTCTGAGCCCCCAGCAGAGGACAAGGCCAGGGACAGTGCCTGCCTCTCCGAGAAACTGAGGGAGAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp AGGGACCTCAGATGTAGGCTTGGGCTCTGGATCTGTAGCTTCTGCTaGAACGTTGCCTGGGGGCCCCTCGGCCGCAGCCACAACACAGGA +
Preference number: 2 (lower is better)
Translates to: RDLRCRLGLWICSFC*NVAWGPLGRSHNTG
Trigger: TCCTGTGTTGTGGCTGCGGCCGAGGGGCCCCCAGGCAACGTTCAAGCAGAAGCTACAGATCCAGAGCCCAAGCCTACATCTGAGGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp CCGCTGCCGGGACTCATCGGCAGCACTGGGCGACCTATGTGGCCCTaGTTTGTGTCCTGTGACCTTCCTCCGAGTGTCATGCTGGCAACA +
Preference number: 2 (lower is better)
Translates to: PLPGLIGSTGRPMWP*FVSCDLPPSVMLAT
Trigger: TGTTGCCAGCATGACACTCGGAGGAAGGTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCCCGGCAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp CCGCATCTTCTCCATCTGCTTCATGCGCTCCTTGTGTCGCTTGTGCCGCTCCTCAGACACACGGCCAGGTaGAGTCTCTGGGCTCCTCCC +
Preference number: 2 (lower is better)
Translates to: PHLLHLLHALLVSLVPLLRHTAR*SLWAPP
Trigger: GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCT...GAGGAGCGGCACAAGCGACACAAGGAGCGCATGAAGCAGATGGAGAAGATGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCGGCAGGCACTGTCCCTaGCCTTGTCCTCTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLGRHCP*PCPLLG
Trigger: CCCCAGCAGAGGACAAGGCCAGGGACAGTGCCTGCC...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp ATTGAGGCTTCAGGGGCACTGTCGTCTGCTAGGACCTCTGTTTCCACTGTAGCTGCGAGCAGGCGCTGGTaGACGCGGTGGAGACGGGCA +
Preference number: 2 (lower is better)
Translates to: IEASGALSSARTSVSTVAASRRW*TRWRRA
Trigger: TGCCCGTCTCCACCGCGTCCACCAGCGCCTGCTCGC...AGCTACAGTGGAAACAGAGGTCCTAGCAGACGACAGTGCCCCTGAAGCCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp GAGTGTGGCTTGCTTTCACCCGTGGTCAGCGTGGGAGCCGGCTCCTaGACCTTTTTGTCCAGCCCCAGAGCCTTCTTGGAAGGAAAGTCC +
Preference number: 2 (lower is better)
Translates to: ECGLLSPVVSVGAGS*TFLSSPRAFLEGKS
Trigger: GGACTTTCCTTCCAAGAAGGCTCTGGGGCTGGACAAAAAGGTCAAGGAGCCGGCTCCCACGCTGACCACGGGTGAAAGCAAGCCACACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp GAAGCAGGGAGAACCTCCTTCAGGGGCTGTCCAGACAGCCAGTCTTaGGACTCTGTACCCGGTCCAGAGTGTGGCTTGCTTTCACCCGTG +
Preference number: 2 (lower is better)
Translates to: EAGRTSFRGCPDSQS*DSVPGPECGLLSPV
Trigger: CACGGGTGAAAGCAAGCCACACTCTGGACCGGGTACAGAGTCCAAAGACTGGCTGTCTGGACAGCCCCTGAAGGAGGTTCTCCCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCCACGGCATTGAGGGCTaGAGCCTCATGTTGCTGCCG +
Preference number: 2 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLHGIEG*SLMLLP
Trigger: CGGCAGCAACATGAGGCTGCAGCCCTCAATGCCGTG...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp GTGGGGCCTGGAGGGCTCTCCGCCGGAGGAACAGGACTGGCCTTTGCGGCTTCTAGGCTGGAGAAGAAATaGCTTTCCAATTGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: VGPGGLSAGGTGLAFAASRLEKK*LSNCQC
Trigger: GCACTGACAATTGGAAAGCCATTTCTTCTCCAGCCT...AGAAGCCGCAAAGGCCAGTCCTGTTCCTCCGGCGGAGAGCCCTCCAGGCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp TCTTCCTTCGGGGACTTGTCCTTCGTGGCCCTCTCCCTCTCTGCTTaGCTGGCACGGTCTTTGTCTTCCCGGAAGGCTCTGCTCATGTCT +
Preference number: 2 (lower is better)
Translates to: SSFGDLSFVALSLSA*LARSLSSRKALLMS
Trigger: AGACATGAGCAGAGCCTTCCGGGAAGACAAAGACCGTGCCAGCAAAGCAGAGAGGGAGAGGGCCACGAAGGACAAGTCCCCGAAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp GGCCGTTCCCAGGGCTCCAGGTTCTTGGGGAAGTCACAGTCTGACTaGTCCTTGAAGCTGCTCTCGAACCCACACTCCTTTAGGTCCTCC +
Preference number: 2 (lower is better)
Translates to: GRSQGSRFLGKSQSD*SLKLLSNPHSFRSS
Trigger: GGAGGACCTAAAGGAGTGTGGGTTCGAGAGCAGCTTCAAGGACAAGTCAGACTGTGACTTCCCCAAGAACCTGGAGCCCTGGGAACGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp TTGCTTTCACCCGTGGTCAGCGTGGGAGCCGGCTCCTTGACCTTTTaGTCCAGCCCCAGAGCCTTCTTGGAAGGAAAGTCCAGGCTCTTC +
Preference number: 2 (lower is better)
Translates to: LLSPVVSVGAGSLTF*SSPRAFLEGKSRLF
Trigger: GAAGAGCCTGGACTTTCCTTCCAAGAAGGCTCTGGGGCTGGACAAAAAGGTCAAGGAGCCGGCTCCCACGCTGACCACGGGTGAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp AATAAGGGAGGAGGAAGACAGGCCCTGCTCAGCAGCGGTGTGTGTCCACTCAACTTGTCAGTGCGCCAGTaGTTCGTGTGCTGGTCGGTG +
Preference number: 2 (lower is better)
Translates to: NKGGGRQALLSSGVCPLNLSVRQ*FVCWSV
Trigger: CACCGACCAGCACACGAAGCACTGGCGCACTGACAA...GTTGAGTGGACACACACCGCTGCTGAGCAGGGCCTGTCTTCCTCCTCCCTTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp AGCGGTGTGTGTCCACTCAACAGGTTCCTCCGTGATGACTGTGGTGAAGGGACCGCAGGGTCCCTTCAATaGCTGGGCTCAGCAGTTCAC +
Preference number: 2 (lower is better)
Translates to: SGVCPLNRFLRDDCGEGTAGSLQ*LGSAVH
Trigger: GTGAACTGCTGAGCCCAGCCATTGAAGGGACCCTGC...GGTCCCTTCACCACAGTCATCACGGAGGAACCTGTTGAGTGGACACACACCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCGTGCCAAGCCATCTGTaGTGGGTCCATCAGGTGCAC +
Preference number: 2 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLVPSHL*WVHQVH
Trigger: GTGCACCTGATGGACCCACCACAGATGGCTTGGCAC...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp GGGACCCTGTCCTGCTCGTCGTCCTCATCAAACTCGTACTCATCCTaGACGGGGGTCACAGTCTTCTGGGGCTCTGGGTTCTTAGCCTTA +
Preference number: 2 (lower is better)
Translates to: GTLSCSSSSSNSYSS*TGVTVFWGSGFLAL
Trigger: TAAGGCTAAGAACCCAGAGCCCCAGAAGACTGTGACCCCCGTCAAGGATGAGTACGAGTTTGATGAGGACGACGAGCAGGACAGGGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp TTGGGAGGGTTGTCCTTGTCTTTGGCTGCAGGCTTTGGCTCGTCCTaGTGGTGTCTCAGGAAGCCGTCCACATGCTTGTCCCTGTGTCTC +
Preference number: 2 (lower is better)
Translates to: LGGLSLSLAAGFGSS*WCLRKPSTCLSLCL
Trigger: GAGACACAGGGACAAGCATGTGGACGGCTTCCTGAGACACCACAAGGACGAGCCAAAGCCTGCAGCCAAAGACAAGGACAACCCTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp TGCCATGAGACTGGTTCCACCTGGCTGAGGGTAGATATGCTAGGATaGCTGTCTAGGAAGCTGCTCTCCAGGGGTCCCAGAGCCTCTACC +
Preference number: 2 (lower is better)
Translates to: CHETGSTWLRVDMLG*LSRKLLSRGPRAST
Trigger: GGTAGAGGCTCTGGGACCCCTGGAGAGCAGCTTCCTAGACAGCAATCCTAGCATATCTACCCTCAGCCAGGTGGAACCAGTCTCATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTCCCAGACAGCCCCATaGCGAACAACAGCCCGGACT +
Preference number: 2 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFSQTAP*RTTART
Trigger: AGTCCGGGCTGTTGTTCGGCATGGGGCTGTCTGGGA...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp CCGCATCTTCTCCATCTGCTTCATGCGCTCCTTGTGTCGCTTGTGCCGCTCCTCGGCTTCTCTGTGTGCTaGCTGTCAGAAGAGGACTTC +
Preference number: 2 (lower is better)
Translates to: PHLLHLLHALLVSLVPLLGFSVC*LSEEDF
Trigger: GAAGTCCTCTTCTGACAGGCAGCACACAGAGAAGCC...GAGGAGCGGCACAAGCGACACAAGGAGCGCATGAAGCAGATGGAGAAGATGCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp TCCTGTCCCGGCCCCCTTCTGCAGACTCTCGCCTTTTCTTGTCTTTCTCAGAAAGAGCCACCTTGTCTGTaGCCACGGTCTCCTTGTCCC +
Preference number: 2 (lower is better)
Translates to: SCPGPLLQTLAFSCLSQKEPPCL*PRSPCP
Trigger: GGGACAAGGAGACCGTGGCCACAGACAAGGTGGCTC...TTTCTGAGAAAGACAAGAAAAGGCGAGAGTCTGCAGAAGGGGGCCGGGACAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp AGCGGTGTGTGTCCACTCAACAGGTTCCTCCGTGATGACTGTGGTGAAGGGACCTCTGACAGGATGCGATaGGCCGCCTTCTTTGGTGCA +
Preference number: 2 (lower is better)
Translates to: SGVCPLNRFLRDDCGEGTSDRMR*AAFFGA
Trigger: TGCACCAAAGAAGGCGGCCCATCGCATCCTGTCAGA...GGTCCCTTCACCACAGTCATCACGGAGGAACCTGTTGAGTGGACACACACCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCGTGCTGGCACCGAATTaGAGATTGAGGCTTCAGGGG +
Preference number: 2 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLVLAPN*RLRLQG
Trigger: CCCCTGAAGCCTCAATCTCCAATTCGGTGCCAGCAC...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp CGGATAGCTGCTCGGTGCAGGCGGGTCTCTCCGCGTTCATTTCTCTaGTTCACCTTATCTTTGGTTTTTGAGGCAGAGTTGGGGGTCCCC +
Preference number: 2 (lower is better)
Translates to: RIAARCRRVSPRSFL*FTLSLVFEAELGVP
Trigger: GGGGACCCCCAACTCTGCCTCAAAAACCAAAGATAAGGTGAACAAGAGAAATGAACGCGGAGAGACCCGCCTGCACCGAGCAGCTATCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp AAAGAACTCACCTCAGACCAGGCTGGAGAAGAAATGGCTTTCCAATaGTCAGTGCGCCAGTGCTTCGTGTGCTGGTCGGTGTGGCCGGAG +
Preference number: 2 (lower is better)
Translates to: KELTSDQAGEEMAFQ*SVRQCFVCWSVWPE
Trigger: CTCCGGCCACACCGACCAGCACACGAAGCACTGGCGCACTGACAATTGGAAAGCCATTTCTTCTCCAGCCTGGTCTGAGGTGAGTTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp TTGTCCTTCGTGGCCCTCTCCCTCTCTGCTTTGCTGGCACGGTCTTaGTCTTCCCGGAAGGCTCTGCTCATGTCTTTGTTGGCATCCTTG +
Preference number: 2 (lower is better)
Translates to: LSFVALSLSALLARS*SSRKALLMSLLASL
Trigger: CAAGGATGCCAACAAAGACATGAGCAGAGCCTTCCGGGAAGACAAAGACCGTGCCAGCAAAGCAGAGAGGGAGAGGGCCACGAAGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp TCCTTCTTGGCTCTTTCACGCTCGTGGCTTTTCTTAGAGGAGGAAGAGGAATGCAGACTTCCAGGAGCGTaGTCAGGCTGGGCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: SFLALSRSWLFLEEEEECRLPGA*SGWAPG
Trigger: GCCAGGAGCCCAGCCTGAGCACGCTCCTGGAAGTCT...GCATTCCTCTTCCTCCTCTAAGAAAAGCCACGAGCGTGAAAGAGCCAAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGCCCTGTCATCAGCTaGAAGAAAACCCAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLCPVIS*KKTQRA
Trigger: TGCCCTCTGGGTTTTCTTCCAGCTGATGACAGGGCA...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp CTCCTGTCCCGGCCCCCTTCTGCAGACTCTCGCCTTTTCTTGTCTTTCTCAGAACCCTCTCTGCTTTGCTaGCACGGTCTTTGTCTTCCC +
Preference number: 2 (lower is better)
Translates to: LLSRPPSADSRLFLSFSEPSLLC*HGLCLP
Trigger: GGGAAGACAAAGACCGTGCCAGCAAAGCAGAGAGGG...TTCTGAGAAAGACAAGAAAAGGCGAGAGTCTGCAGAAGGGGGCCGGGACAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp GAGAACAACTCAATGGCCTTATCCAGCTCCTCCTCCACGTCAGCTTTTGTGGGGGGGACTTGTCCTTCGTaGCCCTCTCCCTCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: ENNSMALSSSSSTSAFVGGTCPS*PSPSLL
Trigger: AAGCAGAGAGGGAGAGGGCCACGAAGGACAAGTCCC...CCCCACAAAAGCTGACGTGGAGGAGGAGCTGGATAAGGCCATTGAGTTGTTCTC
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCGGTTGTCCTTGTCTTTaGCTGCAGGCTTTGGCTCGT +
Preference number: 2 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLGCPCL*LQALAR
Trigger: ACGAGCCAAAGCCTGCAGCCAAAGACAAGGACAACC...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR TCA 90 bp AGCGGTGTGTGTCCACTCAACAGGTTCCTCCGTGATGACTGTGGTGAAGGGACCCAAAACTTGTCATCATaGGGTCGCCATCTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SGVCPLNRFLRDDCGEGTQNLSS*GRHLPG
Trigger: TCCTGGGAGATGGCGACCTCATGATGACAAGTTTTG...GGTCCCTTCACCACAGTCATCACGGAGGAACCTGTTGAGTGGACACACACCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR TCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCGGGTGCATCTGGGTGTaGCTTGCAGTTGCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLGCIWV*LAVAEK
Trigger: TTTTTCAGCAACTGCAAGTCACACCCAGATGCACCC...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGCTTTCTACCTCACTaGATCTGGAGGGGAGACACA +
Preference number: 2 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLCFLPH*IWRGDT
Trigger: TGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCA...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp AGCGGTGTGTGTCCACTCAACAGGTTCCTCCGTGATGACTGTGGTGAAGGGACCTCTCCATCTGCTTCATaGGCTCCTTGTGTCGCTTGT +
Preference number: 2 (lower is better)
Translates to: SGVCPLNRFLRDDCGEGTSPSAS*APCVAC
Trigger: ACAAGCGACACAAGGAGCGCATGAAGCAGATGGAGA...GGTCCCTTCACCACAGTCATCACGGAGGAACCTGTTGAGTGGACACACACCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp ATTGAGGCTTCAGGGGCACTGTCGTCTGCTAGGACCTCTGTTTCCACTGTAGCTCCTTGTCCCAAGGCCTaGCAAAGCTCTGCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: IEASGALSSARTSVSTVAPCPKA*QSSAVS
Trigger: AGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGG...AGCTACAGTGGAAACAGAGGTCCTAGCAGACGACAGTGCCCCTGAAGCCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp TCTGCAGGAACGGGTGGCAGAGGAGCTTTCTCTTCCAGCAAGTGCTGTACTGGGCCTTCTCTATCCTCTTaGCAGGCTCTCGTTCAGGAT +
Preference number: 2 (lower is better)
Translates to: SAGTGGRGAFSSSKCCTGPSLSS*QALVQD
Trigger: ATCCTGAACGAGAGCCTGCCAAGAGGATAGAGAAGG...CCCAGTACAGCACTTGCTGGAAGAGAAAGCTCCTCTGCCACCCGTTCCTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp AGCGGTGTGTGTCCACTCAACAGGTTCCTCCGTGATGACTGTGGTGAAGGGACCCAGCAAGTGCTGTACTaGGGAGTCAAAACTAGAGGG +
Preference number: 2 (lower is better)
Translates to: SGVCPLNRFLRDDCGEGTQQVLY*GVKTRG
Trigger: CCCTCTAGTTTTGACTCCCCAGTACAGCACTTGCTG...GGTCCCTTCACCACAGTCATCACGGAGGAACCTGTTGAGTGGACACACACCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR TCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTCTCTTTGTCCTCTTTaGAGGCCTTCTCCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLSLCPL*RPSPSP
Trigger: AGGAGAAGGAGAAGGCCTTCAAAGAGGACAAAGAGA...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR TCA 90 bp TTGTCAGAATTTGGTTCCTGCAGTGCTGGGACCAAAGACCTATTCCTGATGTCTCTCTCCCCGAGACTCTaGCCTTCTGGGCAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: LSEFGSCSAGTKDLFLMSLSPRL*PSGQAQ
Trigger: CTGAGCCTGCCCAGAAGGTCAGAGTCTCGGGGAGAG...AGACATCAGGAATAGGTCTTTGGTCCCAGCACTGCAGGAACCAAATTCTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR GCA 90 bp TCCTGTCCCGGCCCCCTTCTGCAGACTCTCGCCTTTTCTTGTCTTTCTCAGAAACAGTGCAGTCCAGCCTaGAAAGTCCTTGACGTTCAC +
Preference number: 2 (lower is better)
Translates to: SCPGPLLQTLAFSCLSQKQCSPA*KVLDVH
Trigger: GTGAACGTCAAGGACTTTGCAGGCTGGACTGCACTG...TTTCTGAGAAAGACAAGAAAAGGCGAGAGTCTGCAGAAGGGGGCCGGGACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp AGCGGTGTGTGTCCACTCAACAGGTTCCTCCGTGATGACTGTGGTGAAGGGACCGGAGTGCTCCTTCTCTaGCTTCTCCTTGTGTTTACT +
Preference number: 2 (lower is better)
Translates to: SGVCPLNRFLRDDCGEGTGVLLL*LLLVFT
Trigger: AGTAAACACAAGGAGAAGCCAGAGAAGGAGCACTCC...GGTCCCTTCACCACAGTCATCACGGAGGAACCTGTTGAGTGGACACACACCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp ATTGAGGCTTCAGGGGCACTGTCGTCTGCTAGGACCTCTGTTTCCACTGTAGCTTTCTGCAGGAACGGGTaGCAGAGGAGCTTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: IEASGALSSARTSVSTVAFCRNG*QRSFLF
Trigger: GAAGAGAAAGCTCCTCTGCCACCCGTTCCTGCAGAA...AGCTACAGTGGAAACAGAGGTCCTAGCAGACGACAGTGCCCCTGAAGCCTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp TTAGCCTTAAGCTTGAGGCCTTTCTCAAACTCAGAGTCTGTGTTATaGCCATCGACGGAGCTGGAAGGTGCGAATGACGGGGCGTCCTCT +
Preference number: 2 (lower is better)
Translates to: LALSLRPFSNSESVL*PSTELEGANDGASS
Trigger: AGAGGACGCCCCGTCATTCGCACCTTCCAGCTCCGTCGATGGCAATAACACAGACTCTGAGTTTGAGAAAGGCCTCAAGCTTAAGGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp ACGGGGGTCACAGTCTTCTGGGGCTCTGGGTTCTTAGCCTTAAGCTaGAGGCCTTTCTCAAACTCAGAGTCTGTGTTATTGCCATCGACG +
Preference number: 2 (lower is better)
Translates to: TGVTVFWGSGFLALS*RPFSNSESVLLPST
Trigger: CGTCGATGGCAATAACACAGACTCTGAGTTTGAGAAAGGCCTCAAGCTTAAGGCTAAGAACCCAGAGCCCCAGAAGACTGTGACCCCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR TCA 90 bp CTGCAGGAACGGGTGGCAGAGGAGCTTTCTCTTCCAGCAAGTGCTGTACTGGGGAATTCTTTGTCTTTCTaGCACTTGTCAAGGGTGGAC +
Preference number: 2 (lower is better)
Translates to: LQERVAEELSLPASAVLGNSLSF*HLSRVD
Trigger: GTCCACCCTTGACAAGTGTCAGAAAGACAAAGAATT...CCCCAGTACAGCACTTGCTGGAAGAGAAAGCTCCTCTGCCACCCGTTCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp CAGTCTGAGCTTTTCTTCCTTCGGGGACTTGTCCTTCGTGGCCCTCTCCCTCTCAAGTGTATGTGCCTTTaGCTAACAGGAGGTTCACCA +
Preference number: 2 (lower is better)
Translates to: QSELFFLRGLVLRGPLPLKCMCL*LTGGSP
Trigger: TGGTGAACCTCCTGTTAGGCAAAGGCACATACACTT...GAGAGGGAGAGGGCCACGAAGGACAAGTCCCCGAAGGAAGAAAAGCTCAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp ATCACCACAGCCTGCCTCAGAGTCGAGGGAATCAGTCTCGCTGGCTTGGCTTACTATGTGTGTATGCTGTaGACCACTGGGTTCTTGAGA +
Preference number: 2 (lower is better)
Translates to: ITTACLRVEGISLAGLAYYVCML*TTGFLR
Trigger: TCTCAAGAACCCAGTGGTGCACAGCATACACACATA...GTAAGCCAAGCCAGCGAGACTGATTCCCTCGACTCTGAGGCAGGCTGTGGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR CCA 90 bp CTCCTGTCCCGGCCCCCTTCTGCAGACTCTCGCCTTTTCTTGTCTTTCTCAGAAAGTCTTCTGGGGCTCTaGGTTCTTAGCCTTAAGCTT +
Preference number: 2 (lower is better)
Translates to: LLSRPPSADSRLFLSFSESLLGL*VLSLKL
Trigger: AAGCTTAAGGCTAAGAACCCAGAGCCCCAGAAGACT...TTCTGAGAAAGACAAGAAAAGGCGAGAGTCTGCAGAAGGGGGCCGGGACAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp AGCGGTGTGTGTCCACTCAACAGGTTCCTCCGTGATGACTGTGGTGAAGGGACCTTCTCTCCCTCTCGCTaGACTTCTCTTTGTACTTGT +
Preference number: 2 (lower is better)
Translates to: SGVCPLNRFLRDDCGEGTFSPSR*TSLCTC
Trigger: ACAAGTACAAAGAGAAGTCCAGCGAGAGGGAGAGAA...GGTCCCTTCACCACAGTCATCACGGAGGAACCTGTTGAGTGGACACACACCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp TCCGAGCTCTCAGTAGAGCTCTCCTCACTGGAAGTGTATGTGCCTTaGCCTAACAGGAGGTTCACCATCGTTGGCGAATTGGCTACTTTC +
Preference number: 2 (lower is better)
Translates to: SELSVELSSLEVYVP*PNRRFTIVGELATF
Trigger: GAAAGTAGCCAATTCGCCAACGATGGTGAACCTCCTGTTAGGCAAAGGCACATACACTTCCAGTGAGGAGAGCTCTACTGAGAGCTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp TCTTTCTTGCCGGAGTCTCTGGATGGCACAAGTTTGTCGTTCCCGTaGCTCATCTTTATGGAGTCGCCCTTTTCTCGCTCTGTGTTCTCC +
Preference number: 2 (lower is better)
Translates to: SFLPESLDGTSLSFP*LIFMESPFSRSVFS
Trigger: GGAGAACACAGAGCGAGAAAAGGGCGACTCCATAAAGATGAGCAACGGGAACGACAAACTTGTGCCATCCAGAGACTCCGGCAAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp AGCGGTGTGTGTCCACTCAACAGGTTCCTCCGTGATGACTGTGGTGAAGGGACCACTGGTAAAAGGAGATaGTTTCTACCTCACTGCATC +
Preference number: 2 (lower is better)
Translates to: SGVCPLNRFLRDDCGEGTTGKRR*FLPHCI
Trigger: GATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGT...GGTCCCTTCACCACAGTCATCACGGAGGAACCTGTTGAGTGGACACACACCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp TTGTCCTTTCCTCCTTCCGAAGCTCCTCTGTCCTTCTTCTTTTCCTaGGGCTCTTTGTCTCTTGGCTTCTCTGTGTGCTGCCTGTCAGAA +
Preference number: 2 (lower is better)
Translates to: LSFPPSEAPLSFFFS*GSLSLGFSVCCLSE
Trigger: TTCTGACAGGCAGCACACAGAGAAGCCAAGAGACAAAGAGCCCAAGGAAAAGAAGAAGGACAGAGGAGCTTCGGAAGGAGGAAAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp AGAACAACTCAATGGCCTTATCCAGCTCCTCCTCCACGTCAGCTTTaGTGGGGTAAGAAACCCCGTAAGTCTCTGCATCCAGGAAGTCTT +
Preference number: 2 (lower is better)
Translates to: RTTQWPYPAPPPRQL*WGKKPRKSLHPGSL
Trigger: AAGACTTCCTGGATGCAGAGACTTACGGGGTTTCTTACCCCACAAAAGCTGACGTGGAGGAGGAGCTGGATAAGGCCATTGAGTTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR TCA 90 bp ATTGAGGCTTCAGGGGCACTGTCGTCTGCTAGGACCTCTGTTTCCACTGTAGCTTTTCTGTTGCTTTGTTaGGGATTTCCGCCATACCGT +
Preference number: 2 (lower is better)
Translates to: IEASGALSSARTSVSTVAFLLLC*GFPPYR
Trigger: ACGGTATGGCGGAAATCCTCAACAAAGCAACAGAAA...AGCTACAGTGGAAACAGAGGTCCTAGCAGACGACAGTGCCCCTGAAGCCTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp AACAGGAGGTTCACCATCGTTGGCGAATTGGCTACTTTCAACGGTGTCTCTCCTTTCCGCTCGGGACCCTaGTTCTCTTTCTTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: NRRFTIVGELATFNGVSPFRSGP*FSFFLL
Trigger: AAGCAAGAAGAAAGAGAAGCAGGGTCCCGAGCGGAA...AGGAGAGACACCGTTGAAAGTAGCCAATTCGCCAACGATGGTGAACCTCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp CTCCTGTCCCGGCCCCCTTCTGCAGACTCTCGCCTTTTCTTGTCTTTCTCAGAATCTCTCCTTTTCTGTTaGTTTGTTGAGGATTTCCGC +
Preference number: 2 (lower is better)
Translates to: LLSRPPSADSRLFLSFSESLLFC*FVEDFR
Trigger: GCGGAAATCCTCAACAAAGCAACAGAAAAGGAGAGA...TTCTGAGAAAGACAAGAAAAGGCGAGAGTCTGCAGAAGGGGGCCGGGACAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp TCCTTCTTGGCTCTTTCACGCTCGTGGCTTTTCTTAGAGGAGGAAGAGGAATGCCACCTCAGACCAGGCTaGAGAAGAAATGGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: SFLALSRSWLFLEEEEECHLRPG*RRNGFP
Trigger: TGGAAAGCCATTTCTTCTCCAGCCTGGTCTGAGGTG...GCATTCCTCTTCCTCCTCTAAGAAAAGCCACGAGCGTGAAAGAGCCAAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp ATTGAGGCTTCAGGGGCACTGTCGTCTGCTAGGACCTCTGTTTCCACTGTAGCTTTTCTGAGACCACACTaGAAGCCACAGAAAACCTGT +
Preference number: 2 (lower is better)
Translates to: IEASGALSSARTSVSTVAFLRPH*KPQKTC
Trigger: ACAGGTTTTCTGTGGCTTCCAGTGTGGTCTCAGAAA...AGCTACAGTGGAAACAGAGGTCCTAGCAGACGACAGTGCCCCTGAAGCCTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp GGTTTCCATGGTAAAGGGCTCAAATCCAGTTTTCCAACGATGGCTGGACGGCACTTTCTGCTGCATGTGTaGGAAGGAGAGGAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: GFHGKGLKSSFPTMAGRHFLLHV*EGEEQK
Trigger: TTTCTGCTCCTCTCCTTCCCACACATGCAGCAGAAA...GTGCCGTCCAGCCATCGTTGGAAAACTGGATTTGAGCCCTTTACCATGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
3UTR CAA 90 bp CACTGGAAGTGTATGTGCCTTTGCCTAACAGGAGGTTCACCATCGTaGGCGAATTGGCTACTTTCAACGGTGTCTCTCCTTTTCTGTTGC +
Preference number: 2 (lower is better)
Translates to: HWKCMCLCLTGGSPS*ANWLLSTVSLLFCC
Trigger: GCAACAGAAAAGGAGAGACACCGTTGAAAGTAGCCAATTCGCCAACGATGGTGAACCTCCTGTTAGGCAAAGGCACATACACTTCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 90 bp GTATGTATGTATGTATATGTGTGTATGCTGTGCACCACTGGGTTCTaGAGAGCTGTAGGTTCTGGCACAACCAGGCAGGACCTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: VCMYVYVCMLCTTGF*RAVGSGTTRQDLLA
Trigger: AGCAAGCAGGTCCTGCCTGGTTGTGCCAGAACCTACAGCTCTCAAGAACCCAGTGGTGCACAGCATACACACATATACATACATACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR TCA 90 bp TTAGCGCATGTGAGACTCTACTGCTGCTGTAACAAATCACCACAGCCTGCCTCAACCATATATCTCTCCTaGGAGGCCACTGTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: LAHVRLYCCCNKSPQPASTIYLS*EATVVL
Trigger: AAGAACAACAGTGGCCTCTCAGGAGAGATATATGGT...TGAGGCAGGCTGTGGTGATTTGTTACAGCAGCAGTAGAGTCTCACATGCGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR CCA 90 bp TTTCAAATTCTTTGTCTTTCTGACACTTGTCAAGGGTGGACTTGTCACTTCTCTTGCCATCGACGGAGCTaGAAGGTGCGAATGACGGGG +
Preference number: 2 (lower is better)
Translates to: FQILCLSDTCQGWTCHFSCHRRS*KVRMTG
Trigger: CCCCGTCATTCGCACCTTCCAGCTCCGTCGATGGCA...AGAGAAGTGACAAGTCCACCCTTGACAAGTGTCAGAAAGACAAAGAATTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR GCA 90 bp TTAGCGCATGTGAGACTCTACTGCTGCTGTAACAAATCACCACAGCCTGCCTCAATGTATATGTGTGTATaGTGTGCACCACTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: LAHVRLYCCCNKSPQPASMYMCV*CAPLGS
Trigger: AGAACCCAGTGGTGCACAGCATACACACATATACAT...TGAGGCAGGCTGTGGTGATTTGTTACAGCAGCAGTAGAGTCTCACATGCGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR CAA 90 bp GAAATCAAAAGAGGAATCAGACAGGTCAGAAAACCACCTCTCTTGTaGGTCATCAGAGAGGCTGAACTTGGTGTCCTCATGGTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: EIKRGIRQVRKPPLL*VIREAELGVLMVQK
Trigger: TTTCTGGACCATGAGGACACCAAGTTCAGCCTCTCTGATGACCAACAAGAGAGGTGGTTTTCTGACCTGTCTGATTCCTCTTTTGATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp CTCTATTCAGTCATTTATCAGCATATGCCTGAAACAGTAACTCACTCTATTCCAGAGACTCTGACCTTCTaGGCAGGCTCAGTACCCGAG +
Preference number: 2 (lower is better)
Translates to: LYSVIYQHMPETVTHSIPETLTF*AGSVPE
Trigger: CTCGGGTACTGAGCCTGCCCAGAAGGTCAGAGTCTC...TGGAATAGAGTGAGTTACTGTTTCAGGCATATGCTGATAAATGACTGAATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR CCA 90 bp TTAGCGCATGTGAGACTCTACTGCTGCTGTAACAAATCACCACAGCCTGCCTCAACTACCCACCTTCCATaGTATTCTTTTACAAGTCTC +
Preference number: 2 (lower is better)
Translates to: LAHVRLYCCCNKSPQPASTTHLP*YSFTSL
Trigger: GAGACTTGTAAAAGAATACCATGGAAGGTGGGTAGT...TGAGGCAGGCTGTGGTGATTTGTTACAGCAGCAGTAGAGTCTCACATGCGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR CCA 90 bp CCTAAATTTGAGGTTTCCATGGTAAAGGGCTCAAATCCAGTTTTCCAACGATGGGCACCAACTAACAAATaGCCCTGTTTCTGCTGCATG +
Preference number: 2 (lower is better)
Translates to: PKFEVSMVKGSNPVFQRWAPTNK*PCFCCM
Trigger: CATGCAGCAGAAACAGGGCCATTTGTTAGTTGGTGC...CCATCGTTGGAAAACTGGATTTGAGCCCTTTACCATGGAAACCTCAAATTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
3UTR-3UTR CCA 90 bp TTAAAGAGCCAGTCCTTATCCTCCGGCTTCATCCTACCGAGCTTATCTTCTTTCTGTTCACCTTATCTTTaGTTTTTGAGGCAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: LKSQSLSSGFILPSLSSFCSPYL*FLRQSW
Trigger: CCAACTCTGCCTCAAAAACCAAAGATAAGGTGAACA...GAAAGAAGATAAGCTCGGTAGGATGAAGCCGGAGGATAAGGACTGGCTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CCA 90 bp GCAAACATCCAGTTTCAATCTATCCTCAACTTCAGTTCAAGCTTTAACACATCCTGGTTCCTGCAGTGCTaGGACCAAAGACCTATTCCT +
Preference number: 2 (lower is better)
Translates to: ANIQFQSILNFSSSFNTSWFLQC*DQRPIP
Trigger: AGGAATAGGTCTTTGGTCCCAGCACTGCAGGAACCA...GGATGTGTTAAAGCTTGAACTGAAGTTGAGGATAGATTGAAACTGGATGTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR CAA 90 bp GCTGCCTTTAGGACTACACCATATATCTCTCCTGAGAGGCCACTGTaGTTCTTCAGCTTACTGTGTTCCTATAGTTGTGACATTTTACAT +
Preference number: 2 (lower is better)
Translates to: AAFRTTPYISPERPL*FFSLLCSYSCDILH
Trigger: ATGTAAAATGTCACAACTATAGGAACACAGTAAGCTGAAGAACAACAGTGGCCTCTCAGGAGAGATATATGGTGTAGTCCTAAAGGCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR TCA 90 bp CAGCTCTATTCAGTCATTTATCAGCATATGCCTGAAACAGTAACTCACTCTATTGGTCAGTACCTTCTGTaGCTTTCTCCTAAGGCCAGA +
Preference number: 2 (lower is better)
Translates to: QLYSVIYQHMPETVTHSIGQYLL*LSPKAR
Trigger: TCTGGCCTTAGGAGAAAGTCACAGAAGGTACTGACC...AATAGAGTGAGTTACTGTTTCAGGCATATGCTGATAAATGACTGAATAGAGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR GCA 90 bp CTCTATTCAGTCATTTATCAGCATATGCCTGAAACAGTAACTCACTCTATTCCACACTGCAGTGCTGTTTaGGAGTTATCAAAACTCAGG +
Preference number: 2 (lower is better)
Translates to: LYSVIYQHMPETVTHSIPHCSAV*ELSKLR
Trigger: CCTGAGTTTTGATAACTCGCAAACAGCACTGCAGTG...TGGAATAGAGTGAGTTACTGTTTCAGGCATATGCTGATAAATGACTGAATAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR TCA 90 bp AGAGGCCACTGTTGTTCTTCAGCTTACTGTGTTCCTATAGTTGTGACATTTTACAAACCAGCAAGCAAATaGACCATCATGTCATTATCT +
Preference number: 2 (lower is better)
Translates to: RGHCCSSAYCVPIVVTFYKPASK*TIMSLS
Trigger: AGATAATGACATGATGGTTCATTTGCTTGCTGGTTT...GTAAAATGTCACAACTATAGGAACACAGTAAGCTGAAGAACAACAGTGGCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR CCA 72 bp GGCACGACACTACTGAGGTGGGCGTGGGCACCCCAGTaGGTCGGCTCTGCTCAGTGCGGGGTGAAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: GTTLLRWAWAPQ*VGSAQCGVKQG
Trigger: TCCCTGCTTCACCCCGCACTGAGCAGAGCCGACCCACTGGGGTGCCCACGCCCACCTCAGTAGTGTCGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp CTTCGTAGCTGGGGCACGACACTACTGAGGTGGGCGTaGGCACCCCAGTGGGTCGGCTCTGCTCAGTGCGGG +
Preference number: 3 (lower is better)
Translates to: LRSWGTTLLRWA*APQWVGSAQCG
Trigger: CCCGCACTGAGCAGAGCCGACCCACTGGGGTGCCCACGCCCACCTCAGTAGTGTCGTGCCCCAGCTACGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp TTGTCAGTGCGCCAGTGCTTCGTGTGCTGGTCGGTGTaGCCGGAGCCGTGCTTCTGGGCCACAGCGCTACCA +
Preference number: 3 (lower is better)
Translates to: LSVRQCFVCWSV*PEPCFWATALP
Trigger: TGGTAGCGCTGTGGCCCAGAAGCACGGCTCCGGCCACACCGACCAGCACACGAAGCACTGGCGCACTGACAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp CGTCCTTCCTCCTTTTCTGGGAGGCCGTCCACTCGCTaGGTGTCGCTGGCCTCTGTGGCCTTGAAGCTGCCG +
Preference number: 3 (lower is better)
Translates to: RPSSFSGRPSTR*VSLASVALKLP
Trigger: CGGCAGCTTCAAGGCCACAGAGGCCAGCGACACCCAGCGAGTGGACGGCCTCCCAGAAAAGGAGGAAGGACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp CCTGTCCGAGGGGTGTTCTCGTCCTTCCTCCTTTTCTaGGAGGCCGTCCACTCGCTGGGTGTCGCTGGCCTC +
Preference number: 3 (lower is better)
Translates to: PVRGVFSSFLLF*EAVHSLGVAGL
Trigger: GAGGCCAGCGACACCCAGCGAGTGGACGGCCTCCCAGAAAAGGAGGAAGGACGAGAACACCCCTCGGACAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp AAGGAGACTTCCAGGAGCGTGCTCAGGCTGGGCTCCTaGCCGTGGTCCGCAAAGCTGTCCGAGGAGACCTCG +
Preference number: 3 (lower is better)
Translates to: KETSRSVLRLGS*PWSAKLSEETS
Trigger: CGAGGTCTCCTCGGACAGCTTTGCGGACCACGGCCAGGAGCCCAGCCTGAGCACGCTCCTGGAAGTCTCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp GCTCAGAGAAGGAGACTTCCAGGAGCGTGCTCAGGCTaGGCTCCTGGCCGTGGTCCGCAAAGCTGTCCGAGG +
Preference number: 3 (lower is better)
Translates to: AQRRRLPGACSG*APGRGPQSCPR
Trigger: CCTCGGACAGCTTTGCGGACCACGGCCAGGAGCCCAGCCTGAGCACGCTCCTGGAAGTCTCCTTCTCTGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp TCACCTCTTCGTAGCTGGGGCACGACACTACTGAGGTaGGCGTGGGCACCCCAGTGGGTCGGCTCTGCTCAG +
Preference number: 3 (lower is better)
Translates to: SPLRSWGTTLLR*AWAPQWVGSAQ
Trigger: CTGAGCAGAGCCGACCCACTGGGGTGCCCACGCCCACCTCAGTAGTGTCGTGCCCCAGCTACGAAGAGGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp GTGGGGCCTGGAGGGCTCTCCGCCGGAGGAACAGGACTGGCCTTTGCGGCTTCTCTTTGGCTGCAGGCTTaGGCTCGTCCTTGTGGTGTC +
Preference number: 3 (lower is better)
Translates to: VGPGGLSAGGTGLAFAASLWLQA*ARPCGV
Trigger: GACACCACAAGGACGAGCCAAAGCCTGCAGCCAAAG...AGAAGCCGCAAAGGCCAGTCCTGTTCCTCCGGCGGAGAGCCCTCCAGGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp CCGCATCTTCTCCATCTGCTTCATGCGCTCCTTGTGTCGCTTGTGCCGCTCCTCCTGGCCTCTGTGGCCTaGAAGCTGCCGGCCACGCAA +
Preference number: 3 (lower is better)
Translates to: PHLLHLLHALLVSLVPLLLASVA*KLPATQ
Trigger: TTGCGTGGCCGGCAGCTTCAAGGCCACAGAGGCCAG...GAGGAGCGGCACAAGCGACACAAGGAGCGCATGAAGCAGATGGAGAAGATGCGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 72 bp GATGTAGGCTTGGGCTCTGGATCTGTAGCTTCTGCTTaGACGTTGCCTGGGGGCCCCTCGGCCGCAGCCACA +
Preference number: 3 (lower is better)
Translates to: DVGLGSGSVASA*TLPGGPSAAAT
Trigger: TGTGGCTGCGGCCGAGGGGCCCCCAGGCAACGTTCAAGCAGAAGCTACAGATCCAGAGCCCAAGCCTACATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp GCCACGGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTaGAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGG +
Preference number: 3 (lower is better)
Translates to: ATVSLSQGLAKL*SVWALCSHSNW
Trigger: CCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACCGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR GCA 72 bp GAGTTCCTTGATGCGCCGGGCATCCCCTCGGATAGCTaGTCGGTGCAGGCGGGTCTCTCCGCGTTCATTTCT +
Preference number: 3 (lower is better)
Translates to: EFLDAPGIPSDS*SVQAGLSAFIS
Trigger: AGAAATGAACGCGGAGAGACCCGCCTGCACCGAGCAGCTATCCGAGGGGATGCCCGGCGCATCAAGGAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp CCTTGTCTGTGGCCACGGTCTCCTTGTCCCAAGGCCTaGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCC +
Preference number: 3 (lower is better)
Translates to: PCLWPRSPCPKA*QSSAVSGPCAP
Trigger: GGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACCGTGGCCACAGACAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR CCA 72 bp TGGGGCCTGGAGGGCTCTCCGCCGGAGGAACAGGACTaGCCTTTGCGGCTTCTGCCTCAACATCTGAAGCAT +
Preference number: 3 (lower is better)
Translates to: WGLEGSPPEEQD*PLRLLPQHLKH
Trigger: ATGCTTCAGATGTTGAGGCAGAAGCCGCAAAGGCCAGTCCTGTTCCTCCGGCGGAGAGCCCTCCAGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp GTGGGGCCTGGAGGGCTCTCCGCCGGAGGAACAGGACTGGCCTTTGCGGCTTCTGAAATGGCTTTCCAATaGTCAGTGCGCCAGTGCTTC +
Preference number: 3 (lower is better)
Translates to: VGPGGLSAGGTGLAFAASEMAFQ*SVRQCF
Trigger: GAAGCACTGGCGCACTGACAATTGGAAAGCCATTTC...AGAAGCCGCAAAGGCCAGTCCTGTTCCTCCGGCGGAGAGCCCTCCAGGCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 72 bp TGCTGTGTGGATGTGTTCAGCTGCTGCTGCAGCTGCTaGCTAGACCGCTGGAAGCGCCGCTTGCGGGGATGT +
Preference number: 3 (lower is better)
Translates to: CCVDVFSCCCSC*LDRWKRRLRGC
Trigger: ACATCCCCGCAAGCGGCGCTTCCAGCGGTCTAGTCAGCAGCTGCAGCAGCAGCTGAACACATCCACACAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp TTGATGCGCCGGGCATCCCCTCGGATAGCTGCTCGGTaGAGGCGGGTCTCTCCGCGTTCATTTCTCTTGTTC +
Preference number: 3 (lower is better)
Translates to: LMRRASPRIAAR*RRVSPRSFLLF
Trigger: GAACAAGAGAAATGAACGCGGAGAGACCCGCCTGCACCGAGCAGCTATCCGAGGGGATGCCCGGCGCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp CAGCCTAGCAGGAGCAGCATAAGGAGCAGCCCCTTCTaGAGCAGAGATGGCCACTGGGATTGCTCCTGTCCC +
Preference number: 3 (lower is better)
Translates to: QPSRSSIRSSPF*SRDGHWDCSCP
Trigger: GGGACAGGAGCAATCCCAGTGGCCATCTCTGCTGCAGAAGGGGCTGCTCCTTATGCTGCTCCTGCTAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp CGCAGCCACAACACAGGAGGCCTCTGCACTGTTGTGTaGCTGTGCCAAGCCATCTGTGGTGGGTCCATCAGG +
Preference number: 3 (lower is better)
Translates to: RSHNTGGLCTVV*LCQAICGGSIR
Trigger: CCTGATGGACCCACCACAGATGGCTTGGCACAGGCACACAACAGTGCAGAGGCCTCCTGTGTTGTGGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp GCATTGGGTCCTTCTCTGCTGCAGGTATGCCCTGCTTaGTCTGGCTTGCCAGCATCTGGGCACGGTTCCTGG +
Preference number: 3 (lower is better)
Translates to: ALGPSLLQVCPA*SGLPASGHGSW
Trigger: CCAGGAACCGTGCCCAGATGCTGGCAAGCCAGAGCAAGCAGGGCATACCTGCAGCAGAGAAGGACCCAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp CTGCCGGGACTCATCGGCAGCACTGGGCGACCTATGTaGCCCTTGTTTGTGTCCTGTGACCTTCCTCCGAGT +
Preference number: 3 (lower is better)
Translates to: LPGLIGSTGRPM*PLFVSCDLPPS
Trigger: ACTCGGAGGAAGGTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCCCGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR CCA 72 bp TCTCCCTCAGTTTCTCGGAGAGGCAGGCACTGTCCCTaGCCTTGTCCTCTGCTGGGGGCTCAGAGAAGGAGA +
Preference number: 3 (lower is better)
Translates to: SPSVSRRGRHCP*PCPLLGAQRRR
Trigger: TCTCCTTCTCTGAGCCCCCAGCAGAGGACAAGGCCAGGGACAGTGCCTGCCTCTCCGAGAAACTGAGGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp CCTCTGCACTGTTGTGTGCCTGTGCCAAGCCATCTGTaGTGGGTCCATCAGGTGCACAGCAGGGAGTGGCAG +
Preference number: 3 (lower is better)
Translates to: PLHCCVPVPSHL*WVHQVHSREWQ
Trigger: CTGCCACTCCCTGCTGTGCACCTGATGGACCCACCACAGATGGCTTGGCACAGGCACACAACAGTGCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 72 bp TGCTTTCACCCGTGGTCAGCGTGGGAGCCGGCTCCTTaGCCTTTTTGTCCAGCCCCAGAGCCTTCTTGGAAG +
Preference number: 3 (lower is better)
Translates to: CFHPWSAWEPAP*PFCPAPEPSWK
Trigger: CTTCCAAGAAGGCTCTGGGGCTGGACAAAAAGGTCAAGGAGCCGGCTCCCACGCTGACCACGGGTGAAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 72 bp AGATGGCCACTGGGATTGCTCCTGTCCCACCGTCTTTaGCTTCTTCTAGGGCTGGCTCAGGGGCCGGCAAAG +
Preference number: 3 (lower is better)
Translates to: RWPLGLLLSHRL*LLLGLAQGPAK
Trigger: CTTTGCCGGCCCCTGAGCCAGCCCTAGAAGAAGTCAAAGACGGTGGGACAGGAGCAATCCCAGTGGCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp GACAGGGTAGGTGGGCTCTGCAGCACTGTAGGGTCCTaGGGTGGTGGAATGGAGGGATTCTCCAGGGCAAAA +
Preference number: 3 (lower is better)
Translates to: DRVGGLCSTVGS*GGGMEGFSRAK
Trigger: TTTTGCCCTGGAGAATCCCTCCATTCCACCACCCCAGGACCCTACAGTGCTGCAGAGCCCACCTACCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp GGGGGCCTTAGGGACCTCAGATGTAGGCTTGGGCTCTaGATCTGTAGCTTCTGCTTGAACGTTGCCTGGGGG +
Preference number: 3 (lower is better)
Translates to: GGLRDLRCRLGL*ICSFCLNVAWG
Trigger: CCCCCAGGCAACGTTCAAGCAGAAGCTACAGATCCAGAGCCCAAGCCTACATCTGAGGTCCCTAAGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp GACTATGCTGCCTCTCTCCCCGAGACTCTGACCTTCTaGGCAGGCTCAGTACCCGAGAACAGGGGCTCAGTA +
Preference number: 3 (lower is better)
Translates to: DYAASLPETLTF*AGSVPENRGSV
Trigger: TACTGAGCCCCTGTTCTCGGGTACTGAGCCTGCCCAGAAGGTCAGAGTCTCGGGGAGAGAGGCAGCATAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR CAA 90 bp CTGCAGGAACGGGTGGCAGAGGAGCTTTCTCTTCCAGCAAGTGCTGTACTGGGGTCACTGATGAGTTCCTaGATGCGCCGGGCATCCCCT +
Preference number: 3 (lower is better)
Translates to: LQERVAEELSLPASAVLGSLMSS*MRRASP
Trigger: AGGGGATGCCCGGCGCATCAAGGAACTCATCAGTGA...CCCCAGTACAGCACTTGCTGGAAGAGAAAGCTCCTCTGCCACCCGTTCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp CCTCAGTTTCTCGGAGAGGCAGGCACTGTCCCTGGCCTTGTCCTCTGCTGGGGGAAACCACCTCTCTTGTaGGTCATCAGAGAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: PQFLGEAGTVPGLVLCWGKPPLL*VIREAE
Trigger: TTCAGCCTCTCTGATGACCAACAAGAGAGGTGGTTT...CCCCCAGCAGAGGACAAGGCCAGGGACAGTGCCTGCCTCTCCGAGAAACTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp GGCTCGTCCTTGTGGTGTCTCAGGAAGCCGTCCACATaGTTGTCCCTGTGTCTCTCCTTCTCCTCCCTCCAT +
Preference number: 3 (lower is better)
Translates to: GSSLWCLRKPST*LSLCLSFSSLH
Trigger: ATGGAGGGAGGAGAAGGAGAGACACAGGGACAAGCATGTGGACGGCTTCCTGAGACACCACAAGGACGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp CTCCCAGGAGCTTCTCCCGGGGTCTGCTGTCTTTCTTaGCGGAGTCTCTGGATGGCACAAGTTTGTCGTTCC +
Preference number: 3 (lower is better)
Translates to: LPGASPGVCCLS*RSLWMAQVCRS
Trigger: GGAACGACAAACTTGTGCCATCCAGAGACTCCGGCAAGAAAGACAGCAGACCCCGGGAGAAGCTCCTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp GGAACGGGTGGCAGAGGAGCTTTCTCTTCCAGCAAGTaGTGTACTGGGGAGTCAAAACTAGAGGGCGCAGGG +
Preference number: 3 (lower is better)
Translates to: GTGGRGAFSSSK*CTGESKLEGAG
Trigger: CCCTGCGCCCTCTAGTTTTGACTCCCCAGTACAGCACTTGCTGGAAGAGAAAGCTCCTCTGCCACCCGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp CACAACACAGGAGGCCTCTGCACTGTTGTGTGCCTGTaGCAAGCCATCTGTGGTGGGTCCATCAGGTGCACA +
Preference number: 3 (lower is better)
Translates to: HNTGGLCTVVCL*QAICGGSIRCT
Trigger: TGTGCACCTGATGGACCCACCACAGATGGCTTGGCACAGGCACACAACAGTGCAGAGGCCTCCTGTGTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp TGCCCTGTCATCAGCTGGAAGAAAACCCAGAGGGCATaGCTGACACAGAGCCACCTTGTCTGTGGCCACGGT +
Preference number: 3 (lower is better)
Translates to: CPVISWKKTQRA*LTQSHLVCGHG
Trigger: ACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGTTTTCTTCCAGCTGATGACAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR CCA 72 bp GTTGGGAGGGTTGTCCTTGTCTTTGGCTGCAGGCTTTaGCTCGTCCTTGTGGTGTCTCAGGAAGCCGTCCAC +
Preference number: 3 (lower is better)
Translates to: VGRVVLVFGCRL*LVLVVSQEAVH
Trigger: GTGGACGGCTTCCTGAGACACCACAAGGACGAGCCAAAGCCTGCAGCCAAAGACAAGGACAACCCTCCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp TCTGCAGGAACGGGTGGCAGAGGAGCTTTCTCTTCCAGCAAGTGCTGTACTGGGACTGGGAAGGGTGCTTaGGTGTTGTGTCTACCGGAC +
Preference number: 3 (lower is better)
Translates to: SAGTGGRGAFSSSKCCTGTGKGA*VLCLPD
Trigger: GTCCGGTAGACACAACACCAAAGCACCCTTCCCAGT...CCCAGTACAGCACTTGCTGGAAGAGAAAGCTCCTCTGCCACCCGTTCCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp AATAAGGGAGGAGGAAGACAGGCCCTGCTCAGCAGCGGTGTGTGTCCACTCAACGTGGGCTTCTTCTCTTaGAGCTTGGGGTCTCCAGAC +
Preference number: 3 (lower is better)
Translates to: NKGGGRQALLSSGVCPLNVGFFS*SLGSPD
Trigger: GTCTGGAGACCCCAAGCTCAAAGAGAAGAAGCCCAC...GTTGAGTGGACACACACCGCTGCTGAGCAGGGCCTGTCTTCCTCCTCCCTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 72 bp GGCCTAGGGCAGAAGCAACAGCTAGGTCTTAAGGCTTaGAAAGGGATTGGGTGGGGTGAGAGGCAACAGGGG +
Preference number: 3 (lower is better)
Translates to: GLGQKQQLGLKA*KGIGWGERQQG
Trigger: CCCCTGTTGCCTCTCACCCCACCCAATCCCTTTTCAAGCCTTAAGACCTAGCTGTTGCTTCTGCCCTAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR TCA 72 bp CTAATCTTGACTATGCTGCCTCTCTCCCCGAGACTCTaGCCTTCTGGGCAGGCTCAGTACCCGAGAACAGGG +
Preference number: 3 (lower is better)
Translates to: LILTMLPLSPRL*PSGQAQYPRTG
Trigger: CCCTGTTCTCGGGTACTGAGCCTGCCCAGAAGGTCAGAGTCTCGGGGAGAGAGGCAGCATAGTCAAGATTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR GCA 72 bp GATGTCGTAATAGCCCCGGTTACACGCCTCGTGCAGTaGAGTCCAGCCTGCAAAGTCCTTGACGTTCACGTC +
Preference number: 3 (lower is better)
Translates to: DVVIAPVTRLVQ*SPACKVLDVHV
Trigger: GACGTGAACGTCAAGGACTTTGCAGGCTGGACTGCACTGCACGAGGCGTGTAACCGGGGCTATTACGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp CTCCAGACCGATGCCGCATCTTCTCCATCTGCTTCATaGGCTCCTTGTGTCGCTTGTGCCGCTCCTCAATCT +
Preference number: 3 (lower is better)
Translates to: LQTDAASSPSAS*APCVACAAPQS
Trigger: AGATTGAGGAGCGGCACAAGCGACACAAGGAGCGCATGAAGCAGATGGAGAAGATGCGGCATCGGTCTGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp GGAGTAGTAGCCAGGGGACAGGCAGGCAAACTTTTCTaGAGGAACGGGTGGCAGAGGAGCTTTCTCTTCCAG +
Preference number: 3 (lower is better)
Translates to: GVVARGQAGKLF*RNGWQRSFLFQ
Trigger: CTGGAAGAGAAAGCTCCTCTGCCACCCGTTCCTGCAGAAAAGTTTGCCTGCCTGTCCCCTGGCTACTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp AGGCTTCCGCTCCCTCTCCCGGGAGTGCTCCTTCTCTaGCTTCTCCTTGTGTTTACTCTTCACCTTGTCCTC +
Preference number: 3 (lower is better)
Translates to: RLPLPLPGVLLL*LLLVFTLHLVL
Trigger: GAGGACAAGGTGAAGAGTAAACACAAGGAGAAGCCAGAGAAGGAGCACTCCCGGGAGAGGGAGCGGAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp TCCTTGTCTTTGGCTGCAGGCTTTGGCTCGTCCTTGTaGTGTCTCAGGAAGCCGTCCACATGCTTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: SLSLAAGFGSSL*CLRKPSTCLSL
Trigger: CAGGGACAAGCATGTGGACGGCTTCCTGAGACACCACAAGGACGAGCCAAAGCCTGCAGCCAAAGACAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp CCACAGCTGTTGGTGGACAGTGTAACGTGTCCACCTTaGGCGAGGGGATACCATAGTCTGGGGAGTAGTAGC +
Preference number: 3 (lower is better)
Translates to: PQLLVDSVTCPP*ARGYHSLGSSS
Trigger: GCTACTACTCCCCAGACTATGGTATCCCCTCGCCCAAGGTGGACACGTTACACTGTCCACCAACAGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp CCTTTGCGGCTTCTGCCTCAACATCTGAAGCATCTTTaGCCTGGAGAGGAAGCTCTGGCAGTGAGAAGGGCC +
Preference number: 3 (lower is better)
Translates to: PLRLLPQHLKHL*PGEEALAVRRA
Trigger: GGCCCTTCTCACTGCCAGAGCTTCCTCTCCAGGCCAAAGATGCTTCAGATGTTGAGGCAGAAGCCGCAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp TCTGCAGGAACGGGTGGCAGAGGAGCTTTCTCTTCCAGCAAGTGCTGTACTGGGTTGGGAGGGTTGTCCTaGTCTTTGGCTGCAGGCTTT +
Preference number: 3 (lower is better)
Translates to: SAGTGGRGAFSSSKCCTGLGGLS*SLAAGF
Trigger: AAAGCCTGCAGCCAAAGACAAGGACAACCCTCCCAA...CCCAGTACAGCACTTGCTGGAAGAGAAAGCTCCTCTGCCACCCGTTCCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp AATAAGGGAGGAGGAAGACAGGCCCTGCTCAGCAGCGGTGTGTGTCCACTCAACAAGGAGTTGGGAGGGTaGTCCTTGTCTTTGGCTGCA +
Preference number: 3 (lower is better)
Translates to: NKGGGRQALLSSGVCPLNKELGG*SLSLAA
Trigger: TGCAGCCAAAGACAAGGACAACCCTCCCAACTCCTT...GTTGAGTGGACACACACCGCTGCTGAGCAGGGCCTGTCTTCCTCCTCCCTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 72 bp TGTGTTATTGCCATCGACGGAGCTGGAAGGTGCGAATaGCGGGGCGTCCTCTTCTTCCGAGCTCTCAGTAGA +
Preference number: 3 (lower is better)
Translates to: CVIAIDGAGRCE*RGVLFFRALSR
Trigger: TCTACTGAGAGCTCGGAAGAAGAGGACGCCCCGTCATTCGCACCTTCCAGCTCCGTCGATGGCAATAACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 72 bp AACAGGACTGGCCTTTGCGGCTTCTGCCTCAACATCTaGAGCATCTTTGGCCTGGAGAGGAAGCTCTGGCAG +
Preference number: 3 (lower is better)
Translates to: NRTGLCGFCLNI*SIFGLERKLWQ
Trigger: CTGCCAGAGCTTCCTCTCCAGGCCAAAGATGCTTCAGATGTTGAGGCAGAAGCCGCAAAGGCCAGTCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp AGGTCGAGGTCATCCTCAGGGCTGGTAAAGGCTTCATaGCATGAGACTGGTTCCACCTGGCTGAGGGTAGAT +
Preference number: 3 (lower is better)
Translates to: RSRSSSGLVKAS*HETGSTWLRVD
Trigger: ATCTACCCTCAGCCAGGTGGAACCAGTCTCATGGCATGAAGCCTTTACCAGCCCTGAGGATGACCTCGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp ACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTaGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: TGKRRCFLPHCI*RGDTRPGAVSG
Trigger: CCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR CCA 72 bp CAAACTCAGAGTCTGTGTTATTGCCATCGACGGAGCTaGAAGGTGCGAATGACGGGGCGTCCTCTTCTTCCG +
Preference number: 3 (lower is better)
Translates to: QTQSLCYCHRRS*KVRMTGRPLLP
Trigger: CGGAAGAAGAGGACGCCCCGTCATTCGCACCTTCCAGCTCCGTCGATGGCAATAACACAGACTCTGAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp TCTCCCGGGGTCTGCTGTCTTTCTTGCCGGAGTCTCTaGATGGCACAAGTTTGTCGTTCCCGTTGCTCATCT +
Preference number: 3 (lower is better)
Translates to: SPGVCCLSCRSL*MAQVCRSRCSS
Trigger: AGATGAGCAACGGGAACGACAAACTTGTGCCATCCAGAGACTCCGGCAAGAAAGACAGCAGACCCCGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp TGGCAGAGGAGCTTTCTCTTCCAGCAAGTGCTGTACTaGGGAGTCAAAACTAGAGGGCGCAGGGACACTCTG +
Preference number: 3 (lower is better)
Translates to: WQRSFLFQQVLY*GVKTRGRRDTL
Trigger: CAGAGTGTCCCTGCGCCCTCTAGTTTTGACTCCCCAGTACAGCACTTGCTGGAAGAGAAAGCTCCTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp ATAAGGAGCAGCCCCTTCTGCAGCAGAGATGGCCACTaGGATTGCTCCTGTCCCACCGTCTTTGACTTCTTC +
Preference number: 3 (lower is better)
Translates to: IRSSPFCSRDGH*DCSCPTVFDFF
Trigger: GAAGAAGTCAAAGACGGTGGGACAGGAGCAATCCCAGTGGCCATCTCTGCTGCAGAAGGGGCTGCTCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp GGTGTGGCACTGACCACAGCTGTTGGTGGACAGTGTAACGTGTCCACCTTGGGCGCTCTGCTCATGTCTTaGTTGGCATCCTTGATTCTC +
Preference number: 3 (lower is better)
Translates to: GVALTTAVGGQCNVSTLGALLMS*LASLIL
Trigger: GAGAATCAAGGATGCCAACAAAGACATGAGCAGAGC...GCCCAAGGTGGACACGTTACACTGTCCACCAACAGCTGTGGTCAGTGCCACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp ATTGAGGCTTCAGGGGCACTGTCGTCTGCTAGGACCTCTGTTTCCACTGTAGCTTGGGCTCTTTGTCTCTaGGCTTCTCTGTGTGCTGCC +
Preference number: 3 (lower is better)
Translates to: IEASGALSSARTSVSTVAWALCL*ASLCAA
Trigger: GGCAGCACACAGAGAAGCCAAGAGACAAAGAGCCCA...AGCTACAGTGGAAACAGAGGTCCTAGCAGACGACAGTGCCCCTGAAGCCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 72 bp GAGGTCATCCTCAGGGCTGGTAAAGGCTTCATGCCATaGGACTGGTTCCACCTGGCTGAGGGTAGATATGCT +
Preference number: 3 (lower is better)
Translates to: EVILRAGKGFMP*DWFHLAEGRYA
Trigger: AGCATATCTACCCTCAGCCAGGTGGAACCAGTCTCATGGCATGAAGCCTTTACCAGCCCTGAGGATGACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp GGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATaGTTTCTACCTCACTGCATCTGGAGGGGAGACACA +
Preference number: 3 (lower is better)
Translates to: GPCAPTATGKRR*FLPHCIWRGDT
Trigger: TGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
3UTR GCA 72 bp ATTCTTTGCACGGCATTGAGGGCTGCAGCCTCATGTTaGTGCCGCATCAGCAAACATGTCTTCATGCGGTCG +
Preference number: 3 (lower is better)
Translates to: ILCTALRAAASC*CRISKHVFMRS
Trigger: CGACCGCATGAAGACATGTTTGCTGATGCGGCAGCAACATGAGGCTGCAGCCCTCAATGCCGTGCAAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp AACTCGTACTCATCCTTGACGGGGGTCACAGTCTTCTaGGGCTCTGGGTTCTTAGCCTTAAGCTTGAGGCCT +
Preference number: 3 (lower is better)
Translates to: NSYSSLTGVTVF*GSGFLALSLRP
Trigger: AGGCCTCAAGCTTAAGGCTAAGAACCCAGAGCCCCAGAAGACTGTGACCCCCGTCAAGGATGAGTACGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp TGGCCTTATCCAGCTCCTCCTCCACGTCAGCTTTTGTaGGGTAAGAAACCCCGTAAGTCTCTGCATCCAGGA +
Preference number: 3 (lower is better)
Translates to: WPYPAPPPRQLL*GKKPRKSLHPG
Trigger: TCCTGGATGCAGAGACTTACGGGGTTTCTTACCCCACAAAAGCTGACGTGGAGGAGGAGCTGGATAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp CCGCATCTTCTCCATCTGCTTCATGCGCTCCTTGTGTCGCTTGTGCCGCTCCTCTTCTCCTTGGAGAGCTaGTCCTCTTTCATGTCATTC +
Preference number: 3 (lower is better)
Translates to: PHLLHLLHALLVSLVPLLFSLES*SSFMSF
Trigger: GAATGACATGAAAGAGGACAAGCTCTCCAAGGAGAA...GAGGAGCGGCACAAGCGACACAAGGAGCGCATGAAGCAGATGGAGAAGATGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp GGTGTGGCACTGACCACAGCTGTTGGTGGACAGTGTAACGTGTCCACCTTGGGCCTCTCTGCACACTCCTaGTCTTTCTTTTCTTTGTGC +
Preference number: 3 (lower is better)
Translates to: GVALTTAVGGQCNVSTLGLSAHS*SFFSLC
Trigger: GCACAAAGAAAAGAAAGACAAGGAGTGTGCAGAGAG...GCCCAAGGTGGACACGTTACACTGTCCACCAACAGCTGTGGTCAGTGCCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp CGGAGTCTCTGGATGGCACAAGTTTGTCGTTCCCGTTaGTCATCTTTATGGAGTCGCCCTTTTCTCGCTCTG +
Preference number: 3 (lower is better)
Translates to: RSLWMAQVCRSR*SSLWSRPFLAL
Trigger: CAGAGCGAGAAAAGGGCGACTCCATAAAGATGAGCAACGGGAACGACAAACTTGTGCCATCCAGAGACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp TGGACGGCACCAACTAACAAATGGCCCTGTTTCTGCTaGATGTGTGGGAAGGAGAGGAGCAGAAACAGACAG +
Preference number: 3 (lower is better)
Translates to: WTAPTNKWPCFC*MCGKERSRNRQ
Trigger: CTGTCTGTTTCTGCTCCTCTCCTTCCCACACATGCAGCAGAAACAGGGCCATTTGTTAGTTGGTGCCGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
3UTR-3UTR CAA 90 bp GAGAACAACTCAATGGCCTTATCCAGCTCCTCCTCCACGTCAGCTTTTGTGGGGTTCTCTTTGTCCTCTTaGAAGGCCTTCTCCTTCTCC +
Preference number: 3 (lower is better)
Translates to: ENNSMALSSSSSTSAFVGFSLSS*KAFSFS
Trigger: GGAGAAGGAGAAGGCCTTCAAAGAGGACAAAGAGAA...CCCCACAAAAGCTGACGTGGAGGAGGAGCTGGATAAGGCCATTGAGTTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 72 bp TTGGTTCCTGCAGTGCTGGGACCAAAGACCTATTCCTaGTGTCTGTCGTTAGCGGTCAGTACCTTCTGTGAC +
Preference number: 3 (lower is better)
Translates to: LVPAVLGPKTYS*CLSLAVSTFCD
Trigger: GTCACAGAAGGTACTGACCGCTAACGACAGACATCAGGAATAGGTCTTTGGTCCCAGCACTGCAGGAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR GCA 72 bp GTCCTTCTCGTCCTCGCTCTCATCTGTGAAAATGTCTaGAATGTACCAGCTCTTCTCCTTCCCCTTCCTGTC +
Preference number: 3 (lower is better)
Translates to: VLLVLALICENV*NVPALLLPLPV
Trigger: GACAGGAAGGGGAAGGAGAAGAGCTGGTACATTGCAGACATTTTCACAGATGAGAGCGAGGACGAGAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp GTAACAACAACTTCACCACCTTGTAGTGCCCGTTGTTaGCGGCATCATGCAAAGGTGTGTCATCATCCAGGC +
Preference number: 3 (lower is better)
Translates to: VTTTSPPCSARC*RHHAKVCHHPG
Trigger: GCCTGGATGATGACACACCTTTGCATGATGCCGCCAACAACGGGCACTACAAGGTGGTGAAGTTGTTGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp TGTCAAGGGTGGACTTGTCACTTCTCTCCCTCTCGCTaGACTTCTCTTTGTACTTGTCTGCCCTGCCCTTTT +
Preference number: 3 (lower is better)
Translates to: CQGWTCHFSPSR*TSLCTCLPCPF
Trigger: AAAAGGGCAGGGCAGACAAGTACAAAGAGAAGTCCAGCGAGAGGGAGAGAAGTGACAAGTCCACCCTTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp TCGAGCCGTACGGCTTTAACTCCTTCTCTATCCTCTTaGCAGGCTCTCGTTCAGGATCACTCCTGTCTTTCT +
Preference number: 3 (lower is better)
Translates to: SSRTALTPSLSS*QALVQDHSCLS
Trigger: AGAAAGACAGGAGTGATCCTGAACGAGAGCCTGCCAAGAGGATAGAGAAGGAGTTAAAGCCGTACGGCTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp CTGGTAAAGGCTTCATGCCATGAGACTGGTTCCACCTaGCTGAGGGTAGATATGCTAGGATTGCTGTCTAGG +
Preference number: 3 (lower is better)
Translates to: LVKASCHETGST*LRVDMLGLLSR
Trigger: CCTAGACAGCAATCCTAGCATATCTACCCTCAGCCAGGTGGAACCAGTCTCATGGCATGAAGCCTTTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp GCTCGTTCCTTCAGTGTGTGGGCTGTTGTCAGAATTTaGTTCCTGCAGTGCTGGGACCAAAGACCTATTCCT +
Preference number: 3 (lower is better)
Translates to: ARSFSVWAVVRI*FLQCWDQRPIP
Trigger: AGGAATAGGTCTTTGGTCCCAGCACTGCAGGAACCAAATTCTGACAACAGCCCACACACTGAAGGAACGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR CAA 90 bp AATAAGGGAGGAGGAAGACAGGCCCTGCTCAGCAGCGGTGTGTGTCCACTCAACTTGTTCACCTTATCTTaGGTTTTTGAGGCAGAGTTG +
Preference number: 3 (lower is better)
Translates to: NKGGGRQALLSSGVCPLNLFTLS*VFEAEL
Trigger: CAACTCTGCCTCAAAAACCAAAGATAAGGTGAACAA...GTTGAGTGGACACACACCGCTGCTGAGCAGGGCCTGTCTTCCTCCTCCCTTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp TCCTTCTTGGCTCTTTCACGCTCGTGGCTTTTCTTAGAGGAGGAAGAGGAATGCGGAGGTTCACCATCGTaGGCGAATTGGCTACTTTCA +
Preference number: 3 (lower is better)
Translates to: SFLALSRSWLFLEEEEECGGSPS*ANWLLS
Trigger: TGAAAGTAGCCAATTCGCCAACGATGGTGAACCTCC...GCATTCCTCTTCCTCCTCTAAGAAAAGCCACGAGCGTGAAAGAGCCAAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp GGTGTGGCACTGACCACAGCTGTTGGTGGACAGTGTAACGTGTCCACCTTGGGCTACAGCTTTTCCTTTTaGAGTTTCTCTTTGTCCTCT +
Preference number: 3 (lower is better)
Translates to: GVALTTAVGGQCNVSTLGYSFSF*SFSLSS
Trigger: AGAGGACAAAGAGAAACTCAAAAAGGAAAAGCTGTA...GCCCAAGGTGGACACGTTACACTGTCCACCAACAGCTGTGGTCAGTGCCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp TTAGCGCATGTGAGACTCTACTGCTGCTGTAACAAATCACCACAGCCTGCCTCATCAGTGTGTGGGCTGTaGTCAGAATTTGGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: LAHVRLYCCCNKSPQPASSVCGL*SEFGSC
Trigger: GCAGGAACCAAATTCTGACAACAGCCCACACACTGA...TGAGGCAGGCTGTGGTGATTTGTTACAGCAGCAGTAGAGTCTCACATGCGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR GCA 72 bp AGTGTGTGGGCTGTTGTCAGAATTTGGTTCCTGCAGTaGTGGGACCAAAGACCTATTCCTGATGTCTGTCGT +
Preference number: 3 (lower is better)
Translates to: SVWAVVRIWFLQ*WDQRPIPDVCR
Trigger: ACGACAGACATCAGGAATAGGTCTTTGGTCCCAGCACTGCAGGAACCAAATTCTGACAACAGCCCACACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR GCA 72 bp CCTTCAGTGTGTGGGCTGTTGTCAGAATTTGGTTCCTaGAGTGCTGGGACCAAAGACCTATTCCTGATGTCT +
Preference number: 3 (lower is better)
Translates to: PSVCGLLSEFGS*SAGTKDLFLMS
Trigger: AGACATCAGGAATAGGTCTTTGGTCCCAGCACTGCAGGAACCAAATTCTGACAACAGCCCACACACTGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR GCA 72 bp GCAGTCAGAAGAGCCAGCACTACACAGTCACTGCAGTaGTGTTTGCGAGTTATCAAAACTCAGGTTATCTGG +
Preference number: 3 (lower is better)
Translates to: AVRRASTTQSLQ*CLRVIKTQVIW
Trigger: CCAGATAACCTGAGTTTTGATAACTCGCAAACAGCACTGCAGTGACTGTGTAGTGCTGGCTCTTCTGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR GCA 72 bp CATGAAGAGTTTTTAGCGCATGTGAGACTCTACTGCTaGTGTAACAAATCACCACAGCCTGCCTCAGAGTCG +
Preference number: 3 (lower is better)
Translates to: HEEFLAHVRLYC*CNKSPQPASES
Trigger: CGACTCTGAGGCAGGCTGTGGTGATTTGTTACAGCAGCAGTAGAGTCTCACATGCGCTAAAAACTCTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR GCA 72 bp CACCATGAAGAGTTTTTAGCGCATGTGAGACTCTACTaGTGCTGTAACAAATCACCACAGCCTGCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: HHEEFLAHVRLY*CCNKSPQPASE
Trigger: CTCTGAGGCAGGCTGTGGTGATTTGTTACAGCAGCAGTAGAGTCTCACATGCGCTAAAAACTCTTCATGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR CCA 72 bp CTTTGCCTAACAGGAGGTTCACCATCGTTGGCGAATTaGCTACTTTCAACGGTGTCTCTCCTTTTCTGTTGC +
Preference number: 3 (lower is better)
Translates to: LCLTGGSPSLAN*LLSTVSLLFCC
Trigger: GCAACAGAAAAGGAGAGACACCGTTGAAAGTAGCCAATTCGCCAACGATGGTGAACCTCCTGTTAGGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CCA 72 bp CACTCCTGTCTTTCTTTTCTGAGGAGAACAACTCAATaGCCTTATCCAGCTCCTCCTCCACGTCAGCTTTTG +
Preference number: 3 (lower is better)
Translates to: HSCLSFLRRTTQ*PYPAPPPRQLL
Trigger: CAAAAGCTGACGTGGAGGAGGAGCTGGATAAGGCCATTGAGTTGTTCTCCTCAGAAAAGAAAGACAGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR GCA 72 bp CTCATGCAGTCAGAAGAGCCAGCACTACACAGTCACTaGAGTGCTGTTTGCGAGTTATCAAAACTCAGGTTA +
Preference number: 3 (lower is better)
Translates to: LMQSEEPALHSH*SAVCELSKLRL
Trigger: TAACCTGAGTTTTGATAACTCGCAAACAGCACTGCAGTGACTGTGTAGTGCTGGCTCTTCTGACTGCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR CCA 72 bp TTCTGCAACCCATTCTCTTGTAAGAAGAGCTATGTCTaGCATATCTTAGGGTTTCCTTCCCTACCGGAAGCC +
Preference number: 3 (lower is better)
Translates to: FCNPFSCKKSYV*HILGFPSLPEA
Trigger: GGCTTCCGGTAGGGAAGGAAACCCTAAGATATGCCAGACATAGCTCTTCTTACAAGAGAATGGGTTGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR CCA 72 bp ACAACCAGGCAGGACCTGCTTGCTGCACTATTAACTTaGGCAGATGTTCCCATTCTTACCAAGCTTACTGTT +
Preference number: 3 (lower is better)
Translates to: TTRQDLLAALLT*ADVPILTKLTV
Trigger: AACAGTAAGCTTGGTAAGAATGGGAACATCTGCCCAAGTTAATAGTGCAGCAAGCAGGTCCTGCCTGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR TCA 72 bp ACTTTCAACGGTGTCTCTCCTTTTCTGTTGCTTTGTTaGGGATTTCCGCCATACCGTAACAACAACTTCACC +
Preference number: 3 (lower is better)
Translates to: TFNGVSPFLLLC*GFPPYRNNNFT
Trigger: GGTGAAGTTGTTGTTACGGTATGGCGGAAATCCTCAACAAAGCAACAGAAAAGGAGAGACACCGTTGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR TCA 72 bp CTCACAAACTGTTTCCAGCTCAAGGTATCATCACCATaGAGAGTTTTTAGCGCATGTGAGACTCTACTGCTG +
Preference number: 3 (lower is better)
Translates to: LTNCFQLKVSSP*RVFSACETLLL
Trigger: CAGCAGTAGAGTCTCACATGCGCTAAAAACTCTTCATGGTGATGATACCTTGAGCTGGAAACAGTTTGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR CCA 72 bp CTCTGTCGTGTTTCAATACCTTCAGCTTATTCTCAGTaGAGAGGTCACTCTCTAAAAGGATGGCCTTATCTG +
Preference number: 3 (lower is better)
Translates to: LCRVSIPSAYSQ*RGHSLKGWPYL
Trigger: CAGATAAGGCCATCCTTTTAGAGAGTGACCTCTCCACTGAGAATAAGCTGAAGGTATTGAAACACGACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR-3UTR CAA 90 bp AGGTATCATCACCATGAAGAGTTTTTAGCGCATGTGAGACTCTACTGCTGCTGTTACAAGTCTCAGACATaGCATAGACCCTTTCAGAAC +
Preference number: 3 (lower is better)
Translates to: RYHHHEEFLAHVRLYCCCYKSQT*HRPFQN
Trigger: GTTCTGAAAGGGTCTATGCAATGTCTGAGACTTGTA...ACAGCAGCAGTAGAGTCTCACATGCGCTAAAAACTCTTCATGGTGATGATACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR-3UTR CAA 90 bp TTTCAAATTCTTTGTCTTTCTGACACTTGTCAAGGGTGGACTTGTCACTTCTCTTTCTTCCTTTCCTCTTaGTACAGTCTGAGCTTTTCT +
Preference number: 3 (lower is better)
Translates to: FQILCLSDTCQGWTCHFSFFLSS*YSLSFS
Trigger: AGAAAAGCTCAGACTGTACAAAGAGGAAAGGAAGAA...AGAGAAGTGACAAGTCCACCCTTGACAAGTGTCAGAAAGACAAAGAATTTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR GCA 90 bp TCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTCGCCAGTGCTTCGTGTaGTGGTCGGTGTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: SGLLPLDGRGAPSSAAGTRQCFV*WSVWPE
Trigger: CTCCGGCCACACCGACCAGCACACGAAGCACTGGCG...AGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp TCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGATGGCCTCTGTGGCCTTaGAGCTGCCGGCCACGCAAT +
Preference number: 4 (lower is better)
Translates to: SLGSSHLMDAVLPPPLPGWPLWP*SCRPRN
Trigger: ATTGCGTGGCCGGCAGCTTCAAGGCCACAGAGGCCA...TCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGCGCTCAGGCTGGGCTCCTaGCCGTGGTCCGCAAAGCTG +
Preference number: 4 (lower is better)
Translates to: GETHGQVQSLGSSHLMDALRLGS*PWSAKL
Trigger: CAGCTTTGCGGACCACGGCCAGGAGCCCAGCCTGAG...CGCGTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ACCCAGAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGCGGCGAGCAGGCGCTaGTGGACGCGGTGGAGACGG +
Preference number: 4 (lower is better)
Translates to: TQRAWLTQSHLVCGHGLLAASRR*WTRWRR
Trigger: CCGTCTCCACCGCGTCCACCAGCGCCTGCTCGCCGC...AAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp CCGTCCACTCGCTGGGTGTCGCTGGCCTCTGTGGCCTaGAAGCTGCCGGCCACGCAATCGTCCTTCTCGTCC +
Preference number: 4 (lower is better)
Translates to: PSTRWVSLASVA*KLPATQSSFSS
Trigger: GGACGAGAAGGACGATTGCGTGGCCGGCAGCTTCAAGGCCACAGAGGCCAGCGACACCCAGCGAGTGGACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR GCA 90 bp CTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTGGAGAGCTGAGGCGATaGTTCCTGAGGCGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LHLEGRHTARCSLWAPPTGELRR*FLRRWG
Trigger: GCCCCACCGCCTCAGGAAGCATCGCCTCAGCTCTCC...AGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp TCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACACGGCATTGAGGGCTaGAGCCTCATGTTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SLGSSHLMDAVLPPPLPGHGIEG*SLMLLP
Trigger: CGGCAGCAACATGAGGCTGCAGCCCTCAATGCCGTG...TCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCTGGCTCCTCAGCTGCTaGGGCAGGGACATCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SLHLEGRHTARCSLWAPPWLLSC*GRDIPS
Trigger: GGAGGGGATGTCCCTGCCCCAGCAGCTGAGGAGCCA...GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp TCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTAGGACCCCGTGTAGGTaGCATACTCCGCGTAGCACT +
Preference number: 4 (lower is better)
Translates to: SGLLPLDGRGAPSSAAGTRTPCR*HTPRST
Trigger: AGTGCTACGCGGAGTATGTCACCTACACGGGGTCCT...AGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp TACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCCGGATAGCTGCTCGGTaGAGGCGGGTCTCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: YLTASGGETHGQVQSLGSRIAAR*RRVSPR
Trigger: ACGCGGAGAGACCCGCCTGCACCGAGCAGCTATCCG...GGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTAGACTTCCAGGAGCGTaGTCAGGCTGGGCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LHLEGRHTARCSLWAPPTRLPGA*SGWAPG
Trigger: GCCAGGAGCCCAGCCTGAGCACGCTCCTGGAAGTCT...AGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTCCAGTGGGTCGGCTCTaGTCAGTGCGGGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LHLEGRHTARCSLWAPPTPVGRL*SVRGEA
Trigger: TGCTTCACCCCGCACTGAGCAGAGCCGACCCACTGG...AGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CGGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTGCTGGAAGCGCCGCTTaGGGGGATGTTGGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RSPCPKAWQSSAVSGPCAAGSAA*GDVGPG
Trigger: CCCAGGCCCAACATCCCCGCAAGCGGCGCTTCCAGC...AGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTGGGGTCACAGTCTTCTaGGGCTCTGGGTTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: SGLLPLDGRGAPSSAAGTGVTVF*GSGFLA
Trigger: GGCTAAGAACCCAGAGCCCCAGAAGACTGTGACCCC...AGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCGACGCTGTCTGGGGGTaGTGTGGCACTGACCACAGC +
Preference number: 4 (lower is better)
Translates to: SLHLEGRHTARCSLWAPPDAVWG*CGTDHS
Trigger: GCTGTGGTCAGTGCCACACCACCCCCAGACAGCGTC...GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCGCTCCTGGGGGAGGATaGCAGCTGTGGCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: YLTASGGETHGQVQSLGSAPGGG*QLWPAG
Trigger: ACCAGCAGGCCACAGCTGCCATCCTCCCCCAGGAGC...GGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp CTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTCGCTTGCGGGGATGTTaGGCCTGGGCATCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LHLEGRHTARCSLWAPPTRLRGC*AWASSS
Trigger: GGAGGAAGATGCCCAGGCCCAACATCCCCGCAAGCG...AGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp TCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACACCGAATTGGAGATTaGGGCTTCAGGGGCACTGTC +
Preference number: 4 (lower is better)
Translates to: SLGSSHLMDAVLPPPLPGHRIGD*GFRGTV
Trigger: GACAGTGCCCCTGAAGCCTCAATCTCCAATTCGGTG...TCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp TCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCTCTGTAGCTTCTGCTTaGACGTTGCCTGGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: SLHLEGRHTARCSLWAPPSVASA*TLPGGP
Trigger: GGGGCCCCCAGGCAACGTTCAAGCAGAAGCTACAGA...GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGCGGGCCCTCTCCCTCTCTaGTTTGCTGGCACGGTCTTT +
Preference number: 4 (lower is better)
Translates to: GETHGQVQSLGSSHLMDAGPLPL*FAGTVF
Trigger: AAAGACCGTGCCAGCAAAGCAGAGAGGGAGAGGGCC...CGCGTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp TCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCATGGCAGCTGTGGCCTaGTGGTCCTCTGTGGCATCC +
Preference number: 4 (lower is better)
Translates to: SLHLEGRHTARCSLWAPPMAAVA*WSSVAS
Trigger: GGATGCCACAGAGGACCAGCAGGCCACAGCTGCCAT...GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTAGGAGCAGCCCCTTCTaGAGCAGAGATGGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LHLEGRHTARCSLWAPPTRSSPF*SRDGHW
Trigger: CCAGTGGCCATCTCTGCTGCAGAAGGGGCTGCTCCT...AGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTCATCAGCAGTCAGACTCACTaGTCAGTCCCGTCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GSSHLMDAVLPPPLPGLISSQTH*SVPSLR
Trigger: CCTCAAGGACGGGACTGACCAGTGAGTCTGACTGCT...GATGAGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCGGAGCGTGCTCAGGCTaGGCTCCTGGCCGTGGTCCG +
Preference number: 4 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLGACSG*APGRGP
Trigger: CGGACCACGGCCAGGAGCCCAGCCTGAGCACGCTCC...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGGCCTTGTCCTCTGCTaGGGGCTCAGAGAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GGETHGQVQSLGSSHLMDGLVLC*GLREGD
Trigger: GTCTCCTTCTCTGAGCCCCCAGCAGAGGACAAGGCC...GTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCGGCAGGCACTGTCCCTaGCCTTGTCCTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLLVPRPGKALQCLGLVLGRHCP*PCPLLG
Trigger: CCCCAGCAGAGGACAAGGCCAGGGACAGTGCCTGCC...GAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp CTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTGGCCTGGTGGGTGTCTaGCCTGCTGCGTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LHLEGRHTARCSLWAPPTGLVGV*PAAFSE
Trigger: CTCAGAAAACGCAGCAGGCCAGACACCCACCAGGCC...AGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGAGTGCTGGCACCGAATTaGAGATTGAGGCTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLGSSHLMDAVLPPPLPGVLAPN*RLRLQG
Trigger: CCCCTGAAGCCTCAATCTCCAATTCGGTGCCAGCAC...TCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp GAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGTCCCAGCCTGCAAAGTCCTTaGCGTTCACGTCCGCGCCCT +
Preference number: 4 (lower is better)
Translates to: EGMADTEPPCLWPRSPCPSLQSP*RSRPRP
Trigger: AGGGCGCGGACGTGAACGTCAAGGACTTTGCAGGCT...GGGACAAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp ACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCCCCTGGACTTCTCCTTaGAGGAGTTGGGAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: TRPGAVSGLLPLDGRGAPPWTSP*RSWEGC
Trigger: ACAACCCTCCCAACTCCTTCAAGGAGAAGTCCAGGG...GGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp ACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCAGCAGTCATCTaGATGAGCAGAGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: TRPGAVSGLLPLDGRGAPSSAVI*MSRATC
Trigger: GCAGGTGGCTCTGCTCATGCAGATGACTGCTGAGGA...GGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GGACTCATCGGCAGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACCTCCTTTTCCCGCGCTaGATGGGGCCGTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GLIGSTGRPMWPLFVSCDLLFPR*MGPFPG
Trigger: CCCTGGGAACGGCCCCATGCAGCGCGGGAAAAGGAG...GTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp ACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCTGGCCTTGTCCTCTaGTGGGGGCTCAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: TSLHLEGRHTARCSLWAPPGLVL*WGLREG
Trigger: TCCTTCTCTGAGCCCCCAGCAGAGGACAAGGCCAGG...AGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGTCCCGTCGGCTCTGCTCAGTaGGGGGTGAAGCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: EGMADTEPPCLWPRSPCPVGSAQ*GVKQGE
Trigger: TTCTCCCTGCTTCACCCCGCACTGAGCAGAGCCGAC...GGGACAAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GTGGGGCCTGGAGGGCTCTCCGCCGGAGGAACAGGACTGGCCTTTGCGGCTTCTGGACCGTACCAGCCTTaGAGTACCACAACATGGACT +
Preference number: 4 (lower is better)
Translates to: VGPGGLSAGGTGLAFAASGPYQP*STTTWT
Trigger: AGTCCATGTTGTGGTACTGCAAGGCTGGTACGGTCC...AGAAGCCGCAAAGGCCAGTCCTGTTCCTCCGGCGGAGAGCCCTCCAGGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR CCA 90 bp ACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCTGACAGGATGCGATaGGCCGCCTTCTTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: TRPGAVSGLLPLDGRGAPSDRMR*AAFFGA
Trigger: TGCACCAAAGAAGGCGGCCCATCGCATCCTGTCAGA...GGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp CTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTGTGCCAAGCCATCTGTaGTGGGTCCATCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: LHLEGRHTARCSLWAPPTVPSHL*WVHQVH
Trigger: GTGCACCTGATGGACCCACCACAGATGGCTTGGCAC...AGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp TTGACGTTCACGTCCGCGCCCTCACTGATGAGTTCCTaGATGCGCCGGGCATCCCCTCGGATAGCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LTFTSAPSLMSS*MRRASPRIAAR
Trigger: CCGAGCAGCTATCCGAGGGGATGCCCGGCGCATCAAGGAACTCATCAGTGAGGGCGCGGACGTGAACGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp TCGGCCGCAGCCACAACACAGGAGGCCTCTGCACTGTaGTGTGCCTGTGCCAAGCCATCTGTGGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SAAATTQEASAL*CACAKPSVVGP
Trigger: TGGACCCACCACAGATGGCTTGGCACAGGCACACAACAGTGCAGAGGCCTCCTGTGTTGTGGCTGCGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp AGATGTAGGCTTGGGCTCTGGATCTGTAGCTTCTGCTaGAACGTTGCCTGGGGGCCCCTCGGCCGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RCRLGLWICSFC*NVAWGPLGRSH
Trigger: GTGGCTGCGGCCGAGGGGCCCCCAGGCAACGTTCAAGCAGAAGCTACAGATCCAGAGCCCAAGCCTACATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp TCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTTATCTTTGGTTTTTaGGGCAGAGTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SLGSSHLMDAVLPPPLPGLIFGF*GRVGGP
Trigger: GGGACCCCCAACTCTGCCTCAAAAACCAAAGATAAG...TCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp CTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCATGGGAGCCGGCTCCTTaGCCTTTTTGTCCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LLVPRPGKALQCLGLVLPWEPAP*PFCPAP
Trigger: TGGGGCTGGACAAAAAGGTCAAGGAGCCGGCTCCCA...TGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp GGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGCGTTCTTTGCACGGCATTaGGGGCTGCAGCCTCATGTT +
Preference number: 4 (lower is better)
Translates to: GETHGQVQSLGSSHLMDAFFARH*GLQPHV
Trigger: AACATGAGGCTGCAGCCCTCAATGCCGTGCAAAGAA...CGCGTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp TCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCAGGAAGCCGTCCACATaGTTGTCCCTGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SLHLEGRHTARCSLWAPPRKPST*LSLCLS
Trigger: GGAGAGACACAGGGACAAGCATGTGGACGGCTTCCT...GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTCATCTCTCCATCTGCTTCATaGGCTCCTTGTGTCGCTTGT +
Preference number: 4 (lower is better)
Translates to: GSSHLMDAVLPPPLPGLISPSAS*APCVAC
Trigger: ACAAGCGACACAAGGAGCGCATGAAGCAGATGGAGA...GATGAGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp TCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTGGTAAAGGCTTCATaGCATGAGACTGGTTCCACC +
Preference number: 4 (lower is better)
Translates to: SLGSSHLMDAVLPPPLPGLVKAS*HETGST
Trigger: GGTGGAACCAGTCTCATGGCATGAAGCCTTTACCAG...TCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCGGTGGGTCCATCAGGTaGACAGCAGGGAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GLLVPRPGKALQCLGLVLGGSIR*TAGSGR
Trigger: TCTGCCACTCCCTGCTGTGCACCTGATGGACCCACC...GAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGCGTGTAGTGCCCGTTGTTaGCGGCATCATGCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: GETHGQVQSLGSSHLMDACSARC*RHHAKV
Trigger: CACCTTTGCATGATGCCGCCAACAACGGGCACTACA...CGCGTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCTTCCTCCTTTTCTaGGAGGCCGTCCACTCGCTG +
Preference number: 4 (lower is better)
Translates to: YLTASGGETHGQVQSLGSSFLLF*EAVHSL
Trigger: CAGCGAGTGGACGGCCTCCCAGAAAAGGAGGAAGGA...GGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGCGTGGGCACCCCAGTaGGTCGGCTCTGCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GKALQCLGLVLPQQLVKGAWAPQ*VGSAQC
Trigger: GCACTGAGCAGAGCCGACCCACTGGGGTGCCCACGC...TCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCGCGAGCAGGCGCTGGTaGACGCGGTGGAGACGGGCA +
Preference number: 4 (lower is better)
Translates to: GPCAPTATGKRRCFLPHCASRRW*TRWRRA
Trigger: TGCCCGTCTCCACCGCGTCCACCAGCGCCTGCTCGC...GCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp CTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAGCAGCTGTGGCCTGCTaGTCCTCTGTGGCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LLVPRPGKALQCLGLVLPAAVAC*SSVASR
Trigger: TCTGGATGCCACAGAGGACCAGCAGGCCACAGCTGC...TGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCGCCGAGAACCCCCGTaGGGCCTGGAGGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: TGKRRCFLPHCIWRGDTRRREPP*GLEGSP
Trigger: CGGAGAGCCCTCCAGGCCCCACGGGGGTTCTCGGCG...CCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCAGGCGGTGGGGCTGGTaGCTCCTCAGCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GPCAPTATGKRRCFLPHCRRWGW*LLSCWG
Trigger: GCCCCAGCAGCTGAGGAGCCACCAGCCCCACCGCCT...GCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCGGGGATGTTGGGCCTaGGCATCTTCCTCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: VSLSQGLAKLCSVWALCSRGCWA*ASSSSE
Trigger: CTCTGAGGAGGAAGATGCCCAGGCCCAACATCCCCG...GGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp CACGCCTCGTGCAGTGCAGTCCAGCCTGCAAAGTCCTaGACGTTCACGTCCGCGCCCTCACTGATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: HASCSAVQPAKS*TFTSAPSLMSS
Trigger: GGAACTCATCAGTGAGGGCGCGGACGTGAACGTCAAGGACTTTGCAGGCTGGACTGCACTGCACGAGGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp GGGGACTTGTCCTTCGTGGCCCTCTCCCTCTCTGCTTaGCTGGCACGGTCTTTGTCTTCCCGGAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GDLSFVALSLSA*LARSLSSRKAL
Trigger: CAGAGCCTTCCGGGAAGACAAAGACCGTGCCAGCAAAGCAGAGAGGGAGAGGGCCACGAAGGACAAGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp CCCGTGGTCAGCGTGGGAGCCGGCTCCTTGACCTTTTaGTCCAGCCCCAGAGCCTTCTTGGAAGGAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PVVSVGAGSLTF*SSPRAFLEGKS
Trigger: GGACTTTCCTTCCAAGAAGGCTCTGGGGCTGGACAAAAAGGTCAAGGAGCCGGCTCCCACGCTGACCACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp GGACTCATCGGCAGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACCTGCTCAGTGCGGGGTaGAGCAGGGAGAACCTCCTT +
Preference number: 4 (lower is better)
Translates to: GLIGSTGRPMWPLFVSCDLLSAG*SRENLL
Trigger: AAGGAGGTTCTCCCTGCTTCACCCCGCACTGAGCAG...GTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GGACTCATCGGCAGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACTCCCTCTCCCGGGAGTaGTCCTTCTCTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GLIGSTGRPMWPLFVSCDSLSRE*SFSGFS
Trigger: GGAGAAGCCAGAGAAGGAGCACTCCCGGGAGAGGGA...GTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp TCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTAACCCCGTAAGTCTCTaGATCCAGGAAGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SGLLPLDGRGAPSSAAGTNPVSL*IQEVFL
Trigger: GAGAAAGACTTCCTGGATGCAGAGACTTACGGGGTT...AGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCTCTCTGCTTTGCTaGCACGGTCTTTGTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TSLHLEGRHTARCSLWAPPSLLC*HGLCLP
Trigger: GGGAAGACAAAGACCGTGCCAGCAAAGCAGAGAGGG...AGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGTCCCTGTAGGGTCCTGGGGTaGTGGAATGGAGGGATTCTC +
Preference number: 4 (lower is better)
Translates to: EGMADTEPPCLWPRSPCPCRVLG*WNGGIL
Trigger: GAGAATCCCTCCATTCCACCACCCCAGGACCCTACA...GGGACAAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp CGGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTGAGAGACAGGGTAGGTaGGCTCTGCAGCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: RSPCPKAWQSSAVSGPCAERQGR*ALQHCR
Trigger: CCTACAGTGCTGCAGAGCCCACCTACCCTGTCTCTC...AGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp CTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAAGCAGAGATGGCCACTaGGATTGCTCCTGTCCCACC +
Preference number: 4 (lower is better)
Translates to: LLVPRPGKALQCLGLVLPSRDGH*DCSCPT
Trigger: GGTGGGACAGGAGCAATCCCAGTGGCCATCTCTGCT...TGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp CTCAGTACCCGAGAACAGGGGCTCAGTAGCCACTCATGCAGTCAGAAGAGCCAGGGAGAGAGCAGCCACTaGAGGGCTGCAGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: LSTREQGLSSHSCSQKSQGESSH*RAAGRC
Trigger: GCATCTCCCTGCAGCCCTCCAGTGGCTGCTCTCTCC...CTGGCTCTTCTGACTGCATGAGTGGCTACTGAGCCCCTGTTCTCGGGTACTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
3UTR CAA 72 bp CTCTTCTTGCGCCCGTCCTCCGTGGGCTTCTTCTCTTaGAGCTTGGGGTCTCCAGACCGATGCCGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LFLRPSSVGFFS*SLGSPDRCRIF
Trigger: GAAGATGCGGCATCGGTCTGGAGACCCCAAGCTCAAAGAGAAGAAGCCCACGGAGGACGGGCGCAAGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp GAGATGGCCACTGGGATTGCTCCTGTCCCACCGTCTTaGACTTCTTCTAGGGCTGGCTCAGGGGCCGGCAAA +
Preference number: 4 (lower is better)
Translates to: EMATGIAPVPPS*TSSRAGSGAGK
Trigger: TTTGCCGGCCCCTGAGCCAGCCCTAGAAGAAGTCAAAGACGGTGGGACAGGAGCAATCCCAGTGGCCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp TTCAGCTTCTTCATCGCCACCTCCCGGAGGCTGCTGTaGAGGGGGACTGGGTGCTGGCACCGAATTGGAGAT +
Preference number: 4 (lower is better)
Translates to: FSFFIATSRRLL*RGTGCWHRIGD
Trigger: ATCTCCAATTCGGTGCCAGCACCCAGTCCCCCTCAACAGCAGCCTCCGGGAGGTGGCGATGAAGAAGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp CCTCAGTTTCTCGGAGAGGCAGGCACTGTCCCTGGCCTTGTCCTCTGCTGGGGGCCACCATGTCGTTGCTaGGAGCAAAGTCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: PQFLGEAGTVPGLVLCWGPPCRC*EQSLLA
Trigger: AGCAAGAAGACTTTGCTCTCAGCAACGACATGGTGG...CCCCCAGCAGAGGACAAGGCCAGGGACAGTGCCTGCCTCTCCGAGAAACTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp ACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTTCTCCTTTAAGATGCTaGTGGCACTCGAGCCGTACG +
Preference number: 4 (lower is better)
Translates to: TSLHLEGRHTARCSLWAPSPLRC*WHSSRT
Trigger: CGTACGGCTCGAGTGCCATCAGCATCTTAAAGGAGA...AGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp AAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGGCTTGTCCCCAGCACTaGACTCCTCCTCGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: KGDAFYLTASGGETHGQVACPQH*TPPRVS
Trigger: GGACACCCGAGGAGGAGTTCAGTGCTGGGGACAAGC...CACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCCCCAGAGCCTCTACCTaGGCCACAGCAGTAACACCC +
Preference number: 4 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLPRAST*ATAVTP
Trigger: GGGTGTTACTGCTGTGGCTCAGGTAGAGGCTCTGGG...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp AGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACCTTCCTCCGAGTGTGTCCGAGTCCTTCTaGTCTCCATTGGCCCCCACG +
Preference number: 4 (lower is better)
Translates to: STGRPMWPLFVSCDLPPSVSESF*SPLAPT
Trigger: CGTGGGGGCCAATGGAGAGCAGAAGGACTCGGACAC...ACTCGGAGGAAGGTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
CDS-3UTR GCA 90 bp GCCACTCATGCAGTCAGAAGAGCCAGCACTACACAGTCACTGCAGTGCTGTTTGCGGATAGCTGCTCGGTaGAGGCGGGTCTCTCCGCGT +
Preference number: 4 (lower is better)
Translates to: ATHAVRRASTTQSLQCCLRIAAR*RRVSPR
Trigger: ACGCGGAGAGACCCGCCTGCACCGAGCAGCTATCCG...CAAACAGCACTGCAGTGACTGTGTAGTGCTGGCTCTTCTGACTGCATGAGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS-3UTR GCA 90 bp GGACTCATCGGCAGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACTTGTCAGTGCGCCAGTaGTTCGTGTGCTGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: GLIGSTGRPMWPLFVSCDLSVRQ*FVCWSV
Trigger: CACCGACCAGCACACGAAGCACTGGCGCACTGACAA...GTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp TCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTTTGTCCTCAGCGAAGTaGTTCTTCTCTACCTTTTCG +
Preference number: 4 (lower is better)
Translates to: SGLLPLDGRGAPSSAAGTLSSAK*FFSTFS
Trigger: CGAAAAGGTAGAGAAGAAGCACTTCGCTGAGGACAA...AGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAGCAGGCAAACTTTTCTaGAGGAACGGGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLVPRPGKALQCLGLVLPAGKLF*RNGWQR
Trigger: CCTCTGCCACCCGTTCCTGCAGAAAAGTTTGCCTGC...TGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTGGTGGCTCCTCAGCTaGTGGGGCAGGGACATCCCC +
Preference number: 4 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFWWLLS*WGRDIP
Trigger: GGGGATGTCCCTGCCCCAGCAGCTGAGGAGCCACCA...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp TCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAACACAGGAGGCCTCTaGACTGTTGTGTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SPCPKAWQSSAVSGPCAPNTGGL*TVVCLC
Trigger: GCACAGGCACACAACAGTGCAGAGGCCTCCTGTGTT...GGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTGGTTGTCCTTGTCTTTaGCTGCAGGCTTTGGCTCGT +
Preference number: 4 (lower is better)
Translates to: TSLHLEGRHTARCSLWAPGCPCL*LQALAR
Trigger: ACGAGCCAAAGCCTGCAGCCAAAGACAAGGACAACC...AGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTATCTCGAGGTCTTTCTaGGACAGCATCCTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: SGLLPLDGRGAPSSAAGTISRSF*DSILSK
Trigger: TTTTGAGAGGATGCTGTCCCAGAAAGACCTCGAGAT...AGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp CGGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTGCCCCAGAGCCTTCTTaGAAGGAAAGTCCAGGCTCT +
Preference number: 4 (lower is better)
Translates to: RSPCPKAWQSSAVSGPCAAPEPS*KESPGS
Trigger: AGAGCCTGGACTTTCCTTCCAAGAAGGCTCTGGGGC...AGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCCAGCAAGTGCTGTACTaGGGAGTCAAAACTAGAGGG +
Preference number: 4 (lower is better)
Translates to: SLHLEGRHTARCSLWAPPQQVLY*GVKTRG
Trigger: CCCTCTAGTTTTGACTCCCCAGTACAGCACTTGCTG...GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGTCCCTTCTGCAGGAACGGGTaGCAGAGGAGCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: EGMADTEPPCLWPRSPCPFCRNG*QRSFLF
Trigger: GAAGAGAAAGCTCCTCTGCCACCCGTTCCTGCAGAA...GGGACAAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp TCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGAAGCTGTCCTCTCCTTTaGAATCAAAAGAGGAATCAG +
Preference number: 4 (lower is better)
Translates to: SLGSSHLMDAVLPPPLPGSCPLL*NQKRNQ
Trigger: CTGATTCCTCTTTTGATTTCAAAGGAGAGGACAGCT...TCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp CTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAGGGGAAGTCACAGTCTaGCTTGTCCTTGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLVPRPGKALQCLGLVLPGEVTV*LVLEAA
Trigger: AGCAGCTTCAAGGACAAGTCAGACTGTGACTTCCCC...TGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp GGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACCCTCGCTCTCATCTGTaGAAATGTCTGCAATGTACC +
Preference number: 4 (lower is better)
Translates to: GGETHGQVQSLGSSHLMDPRSHL*KCLQCT
Trigger: GGTACATTGCAGACATTTTCACAGATGAGAGCGAGG...GTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp ACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTGGGTGCATCTGGGTGTaGCTTGCAGTTGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: TSLHLEGRHTARCSLWAPGCIWV*LAVAEK
Trigger: TTTTTCAGCAACTGCAAGTCACACCCAGATGCACCC...AGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp AAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGTCCCAGACAGCCCCATaGCGAACAACAGCCCGGACT +
Preference number: 4 (lower is better)
Translates to: KGDAFYLTASGGETHGQVSQTAP*RTTART
Trigger: AGTCCGGGCTGTTGTTCGGCATGGGGCTGTCTGGGA...CACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCATCCCCTCGGATAGCTaGTCGGTGCAGGCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFIPSDS*SVQAGL
Trigger: GAGACCCGCCTGCACCGAGCAGCTATCCGAGGGGAT...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAGTGCAGTCCAGCCTaGAAAGTCCTTGACGTTCAC +
Preference number: 4 (lower is better)
Translates to: VSLSQGLAKLCSVWALCSQCSPA*KVLDVH
Trigger: GTGAACGTCAAGGACTTTGCAGGCTGGACTGCACTG...GGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAGGCTTCTCTGTGTGCTaGCTGTCAGAAGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: LLVPRPGKALQCLGLVLPGFSVC*LSEEDF
Trigger: GAAGTCCTCTTCTGACAGGCAGCACACAGAGAAGCC...TGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCGCTTCTCCCGGGGTCTaGTGTCTTTCTTGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLASPGV*CLSCRS
Trigger: ACTCCGGCAAGAAAGACAGCAGACCCCGGGAGAAGC...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCATTGGGTCCTTCTCTaGTGCAGGTATGCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: GLLVPRPGKALQCLGLVLHWVLL*CRYALL
Trigger: AAGCAGGGCATACCTGCAGCAGAGAAGGACCCAATG...GAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp AAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATTTTTCCCGCGCTGCATaGGGCCGTTCCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: KALQCLGLVLPQQLVKGDFSRAA*GRSQGS
Trigger: GGAGCCCTGGGAACGGCCCCATGCAGCGCGGGAAAA...ATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCTTCTCTATCCTCTTaGCAGGCTCTCGTTCAGGAT +
Preference number: 4 (lower is better)
Translates to: TSLHLEGRHTARCSLWAPPSLSS*QALVQD
Trigger: ATCCTGAACGAGAGCCTGCCAAGAGGATAGAGAAGG...AGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCTTGCCGGAGTCTCTaGATGGCACAAGTTTGTCGT +
Preference number: 4 (lower is better)
Translates to: YLTASGGETHGQVQSLGSSCRSL*MAQVCR
Trigger: ACGACAAACTTGTGCCATCCAGAGACTCCGGCAAGA...GGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ACCCAGAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTCAAAGGGTAAGATCCTaGAGAGACAGGGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TQRAWLTQSHLVCGHGLLQRVRS*RDRVGG
Trigger: CCCACCTACCCTGTCTCTCCAGGATCTTACCCTTTG...AAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACCTGAGGCGGTGGGGCTaGTGGCTCCTCAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TATGKRRCFLPHCIWRGDLRRWG*WLLSCW
Trigger: CCAGCAGCTGAGGAGCCACCAGCCCCACCGCCTCAG...GTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCCCCGGGTCTGCTGTGTaGATGTGTTCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLPGSAV*MCSAAA
Trigger: AGCAGCAGCTGAACACATCCACACAGCAGACCCGGG...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp TTGCTTTCACCCGTGGTCAGCGTGGGAGCCGGCTCCTaGACCTTTTTGTCCAGCCCCAGAGCCTTCTTGGAA +
Preference number: 4 (lower is better)
Translates to: LLSPVVSVGAGS*TFLSSPRAFLE
Trigger: TTCCAAGAAGGCTCTGGGGCTGGACAAAAAGGTCAAGGAGCCGGCTCCCACGCTGACCACGGGTGAAAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp TCATCGGCAGCACTGGGCGACCTATGTGGCCCTTGTTaGTGTCCTGTGACCTTCCTCCGAGTGTCATGCTGG +
Preference number: 4 (lower is better)
Translates to: SSAALGDLCGPC*CPVTFLRVSCW
Trigger: CCAGCATGACACTCGGAGGAAGGTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp GGACTCATCGGCAGCACTGGGCGACCTATGTGGCCCTaGTTTGTGTCCTGTGACCTTCCTCCGAGTGTCATG +
Preference number: 4 (lower is better)
Translates to: GLIGSTGRPMWP*FVSCDLPPSVM
Trigger: CATGACACTCGGAGGAAGGTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp CGGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCACCATGTCGTTGCTaGGAGCAAAGTCTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RSPCPKAWQSSAVSGPCAPPCRC*EQSLLA
Trigger: AGCAAGAAGACTTTGCTCTCAGCAACGACATGGTGG...AGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp TCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTGGGGTGGTGTGGCACTaGCCACAGCTGTTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SAVSGPCAPTATGKRRCFGVVWH*PQLLVD
Trigger: GTCCACCAACAGCTGTGGTCAGTGCCACACCACCCC...AAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp CTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCATTCTGCCTCAACATCTaGAGCATCTTTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLVPRPGKALQCLGLVLPFCLNI*SIFGLE
Trigger: CTCCAGGCCAAAGATGCTTCAGATGTTGAGGCAGAA...TGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp TCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGAAGAGCAAAGTCTTCTTaGTGTGGTGTTTTAGAACAC +
Preference number: 4 (lower is better)
Translates to: SLGSSHLMDAVLPPPLPGRAKSS*CGVLEH
Trigger: GTGTTCTAAAACACCACAGCAAGAAGACTTTGCTCT...TCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
CDS-3UTR GCA 90 bp GGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACAAGTGTATGTGCCTTTaGCTAACAGGAGGTTCACCA +
Preference number: 4 (lower is better)
Translates to: GGETHGQVQSLGSSHLMDKCMCL*LTGGSP
Trigger: TGGTGAACCTCCTGTTAGGCAAAGGCACATACACTT...GTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTCCTGGGCCTTCAGCTaGCACTCCATTCTTTGCACG +
Preference number: 4 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLSWAFS*HSILCT
Trigger: CGTGCAAAGAATGGAGTGGCAGCTGAAGGCCCAGGA...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTCATCTGTTCACCTTATCTTTaGTTTTTGAGGCAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GSSHLMDAVLPPPLPGLICSPYL*FLRQSW
Trigger: CCAACTCTGCCTCAAAAACCAAAGATAAGGTGAACA...GATGAGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCCACCTCAGACCAGGCTaGAGAAGAAATGGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SPCPKAWQSSAVSGPCAPHLRPG*RRNGFP
Trigger: TGGAAAGCCATTTCTTCTCCAGCCTGGTCTGAGGTG...GGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTTTGTTTTTCTTTTCTaGGGCAGAGTCAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: YLTASGGETHGQVQSLGSFVFLF*GRVSRG
Trigger: GCCTCGGCTGACTCTGCCCCAGAAAAGAAAAACAAA...GGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGTCCCGGAGTGCTCCTTCTCTaGCTTCTCCTTGTGTTTACT +
Preference number: 4 (lower is better)
Translates to: EGMADTEPPCLWPRSPCPGVLLL*LLLVFT
Trigger: AGTAAACACAAGGAGAAGCCAGAGAAGGAGCACTCC...GGGACAAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp CGGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTTGTAGGCTTGGGCTCTaGATCTGTAGCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RSPCPKAWQSSAVSGPCACRLGL*ICSFCL
Trigger: CAAGCAGAAGCTACAGATCCAGAGCCCAAGCCTACA...AGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCTTGTTCTCATCCCCCTaGCTTTCCAGAGGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GLLVPRPGKALQCLGLVLLFSSP*LSRGML
Trigger: CAACATGCCTCTGGAAAGCCAGGGGGATGAGAACAA...GAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp CGGAGGAGCAGTCAGACTCACTGGTCAGTCCCGTCCTaGAGGAGTCTGACAAAGAACTCACCTCAGACCAGG +
Preference number: 4 (lower is better)
Translates to: RRSSQTHWSVPS*RSLTKNSPQTR
Trigger: CCTGGTCTGAGGTGAGTTCTTTGTCAGACTCCTCAAGGACGGGACTGACCAGTGAGTCTGACTGCTCCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp GTGGCCCTCTCCCTCTCTGCTTTGCTGGCACGGTCTTaGTCTTCCCGGAAGGCTCTGCTCATGTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: VALSLSALLARS*SSRKALLMSLL
Trigger: CAACAAAGACATGAGCAGAGCCTTCCGGGAAGACAAAGACCGTGCCAGCAAAGCAGAGAGGGAGAGGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp TCTCCCAGGAGCTTCTCCCGGGGTCTGCTGTCTTTCTaGCCGGAGTCTCTGGATGGCACAAGTTTGTCGTTC +
Preference number: 4 (lower is better)
Translates to: SPRSFSRGLLSF*PESLDGTSLSF
Trigger: GAACGACAAACTTGTGCCATCCAGAGACTCCGGCAAGAAAGACAGCAGACCCCGGGAGAAGCTCCTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp AGAACCTCCTTCAGGGGCTGTCCAGACAGCCAGTCTTaGGACTCTGTACCCGGTCCAGAGTGTGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RTSFRGCPDSQS*DSVPGPECGLL
Trigger: AAGCAAGCCACACTCTGGACCGGGTACAGAGTCCAAAGACTGGCTGTCTGGACAGCCCCTGAAGGAGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp GCCTTTGCGGCTTCTGCCTCAACATCTGAAGCATCTTaGGCCTGGAGAGGAAGCTCTGGCAGTGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: AFAASASTSEAS*AWRGSSGSEKG
Trigger: GCCCTTCTCACTGCCAGAGCTTCCTCTCCAGGCCAAAGATGCTTCAGATGTTGAGGCAGAAGCCGCAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp GTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCAAGGATGGCCTTATCTaGCTTTTGCTTGGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VSLSQGLAKLCSVWALCSKDGLI*LLLGVL
Trigger: GAGGACTCCAAGCAAAAGTCAGATAAGGCCATCCTT...GGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp TCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACTAGAAGACTCTCGTaGCTTACTACCAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: SPCPKAWQSSAVSGPCAPTRRLS*LTTREH
Trigger: ATGCTCCCTGGTAGTAAGGCACGAGAGTCTTCTAGT...GGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGTGCCATCGACGGAGCTaGAAGGTGCGAATGACGGGG +
Preference number: 4 (lower is better)
Translates to: TGKRRCFLPHCIWRGDTRCHRRS*KVRMTG
Trigger: CCCCGTCATTCGCACCTTCCAGCTCCGTCGATGGCA...CCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ACCCAGAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTAACCACCTCTCTTGTTaGTCATCAGAGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: TQRAWLTQSHLVCGHGLLNHLSC*SSERLN
Trigger: GTTCAGCCTCTCTGATGACCAACAAGAGAGGTGGTT...AAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCAGGGCTCCAGGTTCTTaGGGAAGTCACAGTCTGACT +
Preference number: 4 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLRAPGS*GSHSLT
Trigger: AGTCAGACTGTGACTTCCCCAAGAACCTGGAGCCCT...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGACTCATCGGCAGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACACTTTGGTGGTAGATTaGAGAAGACGCTGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLIGSTGRPMWPLFVSCDTLVVD*RRRCLG
Trigger: CCCCAGACAGCGTCTTCTCCAATCTACCACCAAAGT...GTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp CTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTAGGGCAAAAATGTTTTaGGGATTCTGCAAACCTCTG +
Preference number: 4 (lower is better)
Translates to: LHLEGRHTARCSLWAPPTRAKMF*GFCKPL
Trigger: CAGAGGTTTGCAGAATCCCCAAAACATTTTTGCCCT...AGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCAGGGTCCTGGGGTGGTaGAATGGAGGGATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GPCAPTATGKRRCFLPHCRVLGW*NGGILQ
Trigger: CTGGAGAATCCCTCCATTCCACCACCCCAGGACCCT...GCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp ACCTCAGACCAGGCTGGAGAAGAAATGGCTTTCCAATaGTCAGTGCGCCAGTGCTTCGTGTGCTGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: TSDQAGEEMAFQ*SVRQCFVCWSV
Trigger: CACCGACCAGCACACGAAGCACTGGCGCACTGACAATTGGAAAGCCATTTCTTCTCCAGCCTGGTCTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp TTGTCCTTGTCTTTGGCTGCAGGCTTTGGCTCGTCCTaGTGGTGTCTCAGGAAGCCGTCCACATGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LSLSLAAGFGSS*WCLRKPSTCLS
Trigger: GGACAAGCATGTGGACGGCTTCCTGAGACACCACAAGGACGAGCCAAAGCCTGCAGCCAAAGACAAGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp CTGGACTTCTCCTTGAAGGAGTTGGGAGGGTTGTCCTaGTCTTTGGCTGCAGGCTTTGGCTCGTCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LDFSLKELGGLS*SLAAGFGSSLW
Trigger: CCACAAGGACGAGCCAAAGCCTGCAGCCAAAGACAAGGACAACCCTCCCAACTCCTTCAAGGAGAAGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp ACTGGTTCCACCTGGCTGAGGGTAGATATGCTAGGATaGCTGTCTAGGAAGCTGCTCTCCAGGGGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TGSTWLRVDMLG*LSRKLLSRGPR
Trigger: TCTGGGACCCCTGGAGAGCAGCTTCCTAGACAGCAATCCTAGCATATCTACCCTCAGCCAGGTGGAACCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp ACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCGAGGAGACCTCGCTaGTCTTGTCGTTGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TGKRRCFLPHCIWRGDTRPRRPR*SCRWSP
Trigger: AGGACTCCAACGACAAGATCAGCGAGGTCTCCTCGG...CCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp AACAGGAGGTTCACCATCGTTGGCGAATTGGCTACTTTCAACGGTGTCTCTCCTGTGTCCGAGTCCTTCTaGTCTCCATTGGCCCCCACG +
Preference number: 4 (lower is better)
Translates to: NRRFTIVGELATFNGVSPVSESF*SPLAPT
Trigger: CGTGGGGGCCAATGGAGAGCAGAAGGACTCGGACAC...AGGAGAGACACCGTTGAAAGTAGCCAATTCGCCAACGATGGTGAACCTCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR GCA 90 bp TACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCCTAGGGATGCTTTTATaGTTTTCCGTTTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: YLTASGGETHGQVQSLGSLGMLL*FSVWSL
Trigger: GAGAGACCAAACGGAAAAGCATAAAAGCATCCCTAG...GGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp AAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCTCTGCACTGTTGTGTaGCTGTGCCAAGCCATCTGT +
Preference number: 4 (lower is better)
Translates to: KGDAFYLTASGGETHGQVLCTVV*LCQAIC
Trigger: ACAGATGGCTTGGCACAGGCACACAACAGTGCAGAG...CACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GATGGCTGGACGGCACCAACTAACAAATGGCCCTGTTTCTGCTGCATGTGTGGGTCCTCCTGTAACAGATaGTACAAGCAGCACCCAGGC +
Preference number: 4 (lower is better)
Translates to: DGWTAPTNKWPCFCCMCGSSCNR*YKQHPG
Trigger: GCCTGGGTGCTGCTTGTAGCATCTGTTACAGGAGGA...CCCACACATGCAGCAGAAACAGGGCCATTTGTTAGTTGGTGCCGTCCAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS-3UTR CCA 90 bp ACCCAGAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGAGGTTCACCATCGTTaGCGAATTGGCTACTTTCAA +
Preference number: 4 (lower is better)
Translates to: TQRAWLTQSHLVCGHGLLEVHHR*RIGYFQ
Trigger: TTGAAAGTAGCCAATTCGCCAACGATGGTGAACCTC...AAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp AAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGTCTCTCCAGCCCCTATaGAAACACTCACGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KGDAFYLTASGGETHGQVSLQPL*KHSRPP
Trigger: AGGAGGACGTGAGTGTTTCCATAGGGGCTGGAGAGA...CACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp AAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCTGCCTTTTCCTTCTTaGCTCTTTCACGCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: KGDAFYLTASGGETHGQVLPFPS*LFHARG
Trigger: GCCACGAGCGTGAAAGAGCCAAGAAGGAAAAGGCAG...CACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp AAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCAGGGTCCCTTCAATaGCTGGGCTCAGCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: KALQCLGLVLPQQLVKGDAGSLQ*LGSAVH
Trigger: GTGAACTGCTGAGCCCAGCCATTGAAGGGACCCTGC...ATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCCTGCTGGTCCTCTGTaGCATCCAGAGGTAGGCCTA +
Preference number: 4 (lower is better)
Translates to: SAVSGPCAPTATGKRRCFPAGPL*HPEVGL
Trigger: TAGGCCTACCTCTGGATGCCACAGAGGACCAGCAGG...AAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGAAGCATCTTTGGCCTaGAGAGGAAGCTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: GKALQCLGLVLPQQLVKGEASLA*RGSSGS
Trigger: ACTGCCAGAGCTTCCTCTCCAGGCCAAAGATGCTTC...TCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp CAGGGCTCCAGGTTCTTGGGGAAGTCACAGTCTGACTaGTCCTTGAAGCTGCTCTCGAACCCACACTCCTTT +
Preference number: 4 (lower is better)
Translates to: QGSRFLGKSQSD*SLKLLSNPHSF
Trigger: AAAGGAGTGTGGGTTCGAGAGCAGCTTCAAGGACAAGTCAGACTGTGACTTCCCCAAGAACCTGGAGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp ATCTTCTCCATCTGCTTCATGCGCTCCTTGTGTCGCTaGTGCCGCTCCTCAATCTCGAGGTCTTTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: IFSICFMRSLCR*CRSSISRSFWD
Trigger: GTCCCAGAAAGACCTCGAGATTGAGGAGCGGCACAAGCGACACAAGGAGCGCATGAAGCAGATGGAGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp CATTCTTTGCACGGCATTGAGGGCTGCAGCCTCATGTaGCTGCCGCATCAGCAAACATGTCTTCATGCGGTC +
Preference number: 4 (lower is better)
Translates to: HSLHGIEGCSLM*LPHQQTCLHAV
Trigger: GACCGCATGAAGACATGTTTGCTGATGCGGCAGCAACATGAGGCTGCAGCCCTCAATGCCGTGCAAAGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp ACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGAGGCAGACAGTGAGCTaGACAGGGAAGGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TGKRRCFLPHCIWRGDTRRQTVS*TGKGPS
Trigger: TGAAGGACCCTTCCCTGTTCAGCTCACTGTCTGCCT...CCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp TGGACGGCACCAACTAACAAATGGCCCTGTTTCTGCTGCATGTGTGGGAAGGAGGGCATCTTGACCAGGTaGAGTAAGCAGGCAACCACA +
Preference number: 4 (lower is better)
Translates to: WTAPTNKWPCFCCMCGKEGILTR*SKQATT
Trigger: TGTGGTTGCCTGCTTACTTCACCTGGTCAAGATGCC...CTCCTTCCCACACATGCAGCAGAAACAGGGCCATTTGTTAGTTGGTGCCGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS-3UTR GCA 90 bp GCCACTCATGCAGTCAGAAGAGCCAGCACTACACAGTCACTGCAGTGCTGTTTGCAGTGCAGTCCAGCCTaGAAAGTCCTTGACGTTCAC +
Preference number: 4 (lower is better)
Translates to: ATHAVRRASTTQSLQCCLQCSPA*KVLDVH
Trigger: GTGAACGTCAAGGACTTTGCAGGCTGGACTGCACTG...CAAACAGCACTGCAGTGACTGTGTAGTGCTGGCTCTTCTGACTGCATGAGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS-3UTR GCA 90 bp GGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACTCTTCTTTCTTAAGGTaGTCTCTGTCGTGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: GGETHGQVQSLGSSHLMDSSFLR*SLSCFN
Trigger: ATTGAAACACGACAGAGAGCACCTTAAGAAAGAAGA...GTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGATCTCCCTCTCTGCTTTaGTGGCACGGTCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GKALQCLGLVLPQQLVKGSPSLL*WHGLCL
Trigger: AAGACAAAGACCGTGCCAGCAAAGCAGAGAGGGAGA...TCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGTACTTGTCTGCCCTaGCCTTTTCCTTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLCTCLP*PFPSFP
Trigger: AGGAAAGGAAGGAAAAGGGCAGGGCAGACAAGTACA...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp TACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCCTGTGTATGTCTTTATaGTTTTCCTTGCCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: YLTASGGETHGQVQSLGSLCMSL*FSLPSF
Trigger: GAAAGACGGCAAGGAAAAGCATAAAGACATACACAG...GGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCAACAGGACTGGCCTTTaGGGCTTCTGCCTCAACATC +
Preference number: 4 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFNRTGL*GFCLNI
Trigger: GATGTTGAGGCAGAAGCCGCAAAGGCCAGTCCTGTT...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp AAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATTGGGTCCTTCTCTGCTaGAGGTATGCCCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KALQCLGLVLPQQLVKGDWVLLC*RYALLA
Trigger: AGCAAGCAGGGCATACCTGCAGCAGAGAAGGACCCA...ATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp AGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACCTTCCTCCGAGTAGTCTTCTGGGGCTCTaGGTTCTTAGCCTTAAGCTT +
Preference number: 4 (lower is better)
Translates to: STGRPMWPLFVSCDLPPSSLLGL*VLSLKL
Trigger: AAGCTTAAGGCTAAGAACCCAGAGCCCCAGAAGACT...ACTCGGAGGAAGGTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACGGGACTTGTCCTTCGTaGCCCTCTCCCTCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TATGKRRCFLPHCIWRGDGTCPS*PSPSLL
Trigger: AAGCAGAGAGGGAGAGGGCCACGAAGGACAAGTCCC...GTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp TCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCTGGAAGCTCGGTCTTTaGACTTTTTCTTCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SPCPKAWQSSAVSGPCAPWKLGL*TFSSFP
Trigger: AGGAAAGGAAGAAAAAGTCCAAAGACCGAGCTTCCA...GGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp AGCTTGAGGCCTTTCTCAAACTCAGAGTCTGTGTTATaGCCATCGACGGAGCTGGAAGGTGCGAATGACGGG +
Preference number: 4 (lower is better)
Translates to: SLRPFSNSESVL*PSTELEGANDG
Trigger: CCCGTCATTCGCACCTTCCAGCTCCGTCGATGGCAATAACACAGACTCTGAGTTTGAGAAAGGCCTCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp CAATGGCCTTATCCAGCTCCTCCTCCACGTCAGCTTTaGTGGGGTAAGAAACCCCGTAAGTCTCTGCATCCA +
Preference number: 4 (lower is better)
Translates to: QWPYPAPPPRQL*WGKKPRKSLHP
Trigger: TGGATGCAGAGACTTACGGGGTTTCTTACCCCACAAAAGCTGACGTGGAGGAGGAGCTGGATAAGGCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp CCGGAGTCTCTGGATGGCACAAGTTTGTCGTTCCCGTaGCTCATCTTTATGGAGTCGCCCTTTTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: PESLDGTSLSFP*LIFMESPFSRS
Trigger: AGAGCGAGAAAAGGGCGACTCCATAAAGATGAGCAACGGGAACGACAAACTTGTGCCATCCAGAGACTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp CCAACTAACAAATGGCCCTGTTTCTGCTGCATGTGTGGGAAGGAGAGGAGCAGAGCTCAGGAATGGGTATaGACTCCAGCAGGGCAGTAT +
Preference number: 4 (lower is better)
Translates to: PTNKWPCFCCMCGKERSRAQEWV*TPAGQY
Trigger: ATACTGCCCTGCTGGAGTTCATACCCATTCCTGAGC...TCTGCTCCTCTCCTTCCCACACATGCAGCAGAAACAGGGCCATTTGTTAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS-3UTR GCA 90 bp GGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCCTTCCCGGAAGGCTCTaGTCATGTCTTTGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: GPCAPTATGKRRCFLPHCLPGRL*SCLCWH
Trigger: ATGCCAACAAAGACATGAGCAGAGCCTTCCGGGAAG...GCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGATTTAGGTCCTCCCTGTaGACTTCTTCAGACCGAATC +
Preference number: 4 (lower is better)
Translates to: GKALQCLGLVLPQQLVKGFRSSL*TSSDRI
Trigger: GATTCGGTCTGAAGAAGTGCACAGGGAGGACCTAAA...TCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCCGCATCTTCTCCATCTaGTTCATGCGCTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFRIFSI*FMRSLC
Trigger: ACACAAGGAGCGCATGAAGCAGATGGAGAAGATGCG...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp AAGAAGAGCTATGTCTGGCATATCTTAGGGTTTCCTTCCCTACCGGAAGCCCTTAGGGCTGCAGGGAGATaGCAACCTTGTAGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: KKSYVWHILGFPSLPEALRAAGR*QPCSAR
Trigger: ACGGGCACTACAAGGTTGGCATCTCCCTGCAGCCCT...AAGGGCTTCCGGTAGGGAAGGAAACCCTAAGATATGCCAGACATAGCTCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS-3UTR CCA 90 bp ATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCAGGCTGGAGAAGAAATaGCTTTCCAATTGTCAGTGC +
Preference number: 4 (lower is better)
Translates to: MLSTSLHLEGRHTARCSLRLEKK*LSNCQC
Trigger: GCACTGACAATTGGAAAGCCATTTCTTCTCCAGCCT...GAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCGTCTACCGGACTATTTaGAGACTCCTCAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFVYRTI*RLLSSH
Trigger: ATGACTGCTGAGGAGTCTGCAAATAGTCCGGTAGAC...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCCTCTTTGTACTTGTCTaGCCTGCCCTTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GPCAPTATGKRRCFLPHCLFVLV*PALFLP
Trigger: AGGAAGGAAAAGGGCAGGGCAGACAAGTACAAAGAG...GCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGACTCATCGGCAGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACTCAGCTTATTCTCAGTaGAGAGGTCACTCTCTAAAA +
Preference number: 4 (lower is better)
Translates to: GLIGSTGRPMWPLFVSCDSAYSQ*RGHSLK
Trigger: TTTTAGAGAGTGACCTCTCCACTGAGAATAAGCTGA...GTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp GGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGATTCTCTCCCTCTCGCTaGACTTCTCTTTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: GKALQCLGLVLPQQLVKGFSPSR*TSLCTC
Trigger: ACAAGTACAAAGAGAAGTCCAGCGAGAGGGAGAGAA...TCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp GCTCGGTGCAGGCGGGTCTCTCCGCGTTCATTTCTCTaGTTCACCTTATCTTTGGTTTTTGAGGCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: ARCRRVSPRSFL*FTLSLVFEAEL
Trigger: CAACTCTGCCTCAAAAACCAAAGATAAGGTGAACAAGAGAAATGAACGCGGAGAGACCCGCCTGCACCGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp ACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGTCTCTTTGTCCTCTTTaGAGGCCTTCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TGKRRCFLPHCIWRGDTRSLCPL*RPSPSP
Trigger: AGGAGAAGGAGAAGGCCTTCAAAGAGGACAAAGAGA...CCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp ACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACCAAAACTTGTCATCATaGGGTCGCCATCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TATGKRRCFLPHCIWRGDQNLSS*GRHLPG
Trigger: TCCTGGGAGATGGCGACCTCATGATGACAAGTTTTG...GTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp GGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCTTCTTTTCTTTTTGCTaGCTAGAACTAGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: GLLVPRPGKALQCLGLVLFFSFC*LELEDS
Trigger: AGAGTCTTCTAGTTCTAGGCAGCAAAAAGAAAAGAA...GAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp CAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACCATCTGAAGCATCTTTaGCCTGGAGAGGAAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QLVKGDAFYLTASGGETHHLKHL*PGEEAL
Trigger: CAGAGCTTCCTCTCCAGGCCAAAGATGCTTCAGATG...GTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CCA 90 bp ACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGACTCAAAGTAGGGATTaGACCTGTCACTGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: TGKRRCFLPHCIWRGDTRTQSRD*TCHCGR
Trigger: CCTACCACAGTGACAGGTCCAATCCCTACTTTGAGT...CCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp TCAGTAGAGCTCTCCTCACTGGAAGTGTATGTGCCTTaGCCTAACAGGAGGTTCACCATCGTTGGCGAATTG +
Preference number: 4 (lower is better)
Translates to: SVELSSLEVYVP*PNRRFTIVGEL
Trigger: CAATTCGCCAACGATGGTGAACCTCCTGTTAGGCAAAGGCACATACACTTCCAGTGAGGAGAGCTCTACTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp CTCTGTCCTTCTTCTTTTCCTTGGGCTCTTTGTCTCTaGGCTTCTCTGTGTGCTGCCTGTCAGAAGAGGACT +
Preference number: 4 (lower is better)
Translates to: LCPSSFPWALCL*ASLCAACQKRT
Trigger: AGTCCTCTTCTGACAGGCAGCACACAGAGAAGCCAAGAGACAAAGAGCCCAAGGAAAAGAAGAAGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp CCAACTAACAAATGGCCCTGTTTCTGCTGCATGTGTGGGAAGGAGAGGAGCAGAACACCAGCTGATTTCTaGAAGGGATTCCATGGCAAA +
Preference number: 4 (lower is better)
Translates to: PTNKWPCFCCMCGKERSRTPADF*KGFHGK
Trigger: TTTGCCATGGAATCCCTTTCAGAAATCAGCTGGTGT...TCTGCTCCTCTCCTTCCCACACATGCAGCAGAAACAGGGCCATTTGTTAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS-3UTR GCA 90 bp AACGATGGCTGGACGGCACCAACTAACAAATGGCCCTGTTTCTGCTGCATGTGTGGCAAAAACCAGTGTTaGTCAGGAATGGGTATGAAC +
Preference number: 4 (lower is better)
Translates to: NDGWTAPTNKWPCFCCMCGKNQC*SGMGMN
Trigger: GTTCATACCCATTCCTGAGCAACACTGGTTTTTGCC...ACACATGCAGCAGAAACAGGGCCATTTGTTAGTTGGTGCCGTCCAGCCATCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS-3UTR CCA 90 bp TCCTGTCCCGGCCCCCTTCTGCAGACTCTCGCCTTTTCTTGTCTTTCTCAGAAAAAAGTCTTCTTGCTGTaGTGTTTTAGAACACCCACC +
Preference number: 4 (lower is better)
Translates to: SCPGPLLQTLAFSCLSQKKVFLL*CFRTPT
Trigger: GGTGGGTGTTCTAAAACACCACAGCAAGAAGACTTT...TTTCTGAGAAAGACAAGAAAAGGCGAGAGTCTGCAGAAGGGGGCCGGGACAGGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR CCA 90 bp TCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTTTTCTGAGACCACACTaGAAGCCACAGAAAACCTGT +
Preference number: 4 (lower is better)
Translates to: SAVSGPCAPTATGKRRCFFLRPH*KPQKTC
Trigger: ACAGGTTTTCTGTGGCTTCCAGTGTGGTCTCAGAAA...AAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp CCTTTGCCTAACAGGAGGTTCACCATCGTTGGCGAATaGGCTACTTTCAACGGTGTCTCTCCTTTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: PLPNRRFTIVGE*ATFNGVSPFLL
Trigger: CAACAGAAAAGGAGAGACACCGTTGAAAGTAGCCAATTCGCCAACGATGGTGAACCTCCTGTTAGGCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp TGTATGTGCCTTTGCCTAACAGGAGGTTCACCATCGTaGGCGAATTGGCTACTTTCAACGGTGTCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CMCLCLTGGSPS*ANWLLSTVSLL
Trigger: AAGGAGAGACACCGTTGAAAGTAGCCAATTCGCCAACGATGGTGAACCTCCTGTTAGGCAAAGGCACATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR TCA 90 bp ACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACTTTCTGTTGCTTTGTTaGGGATTTCCGCCATACCGT +
Preference number: 4 (lower is better)
Translates to: TATGKRRCFLPHCIWRGDFLLLC*GFPPYR
Trigger: ACGGTATGGCGGAAATCCTCAACAAAGCAACAGAAA...GTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR TCA 90 bp TCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTAATTCTTTGTCTTTCTaGCACTTGTCAAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SAVSGPCAPTATGKRRCFNSLSF*HLSRVD
Trigger: GTCCACCCTTGACAAGTGTCAGAAAGACAAAGAATT...AAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CAGCTCTATTCAGTCATTTATCAGCATATGCCTGAAACAGTAACTCACTCTATTATCCCCTCGGATAGCTaGTCGGTGCAGGCGGGTCTC +
Preference number: 4 (lower is better)
Translates to: QLYSVIYQHMPETVTHSIIPSDS*SVQAGL
Trigger: GAGACCCGCCTGCACCGAGCAGCTATCCGAGGGGAT...AATAGAGTGAGTTACTGTTTCAGGCATATGCTGATAAATGACTGAATAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS-3UTR CCA 90 bp ACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGAAAGTCTTCTTGCTGTaGTGTTTTAGAACACCCACC +
Preference number: 4 (lower is better)
Translates to: TGKRRCFLPHCIWRGDTRKVFLL*CFRTPT
Trigger: GGTGGGTGTTCTAAAACACCACAGCAAGAAGACTTT...CCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
CDS-3UTR CCA 90 bp GCCACTCATGCAGTCAGAAGAGCCAGCACTACACAGTCACTGCAGTGCTGTTTGTGTTCACCTTATCTTTaGTTTTTGAGGCAGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ATHAVRRASTTQSLQCCLCSPYL*FLRQSW
Trigger: CCAACTCTGCCTCAAAAACCAAAGATAAGGTGAACA...CAAACAGCACTGCAGTGACTGTGTAGTGCTGGCTCTTCTGACTGCATGAGTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS-3UTR TCA 90 bp AGGTATCATCACCATGAAGAGTTTTTAGCGCATGTGAGACTCTACTGCTGCTGTCTTATCTTTGGTTTTTaGGGCAGAGTTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RYHHHEEFLAHVRLYCCCLIFGF*GRVGGP
Trigger: GGGACCCCCAACTCTGCCTCAAAAACCAAAGATAAG...ACAGCAGCAGTAGAGTCTCACATGCGCTAAAAACTCTTCATGGTGATGATACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS-3UTR GCA 90 bp CAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACTCTCTCCTTTTCTGTTaGTTTGTTGAGGATTTCCGC +
Preference number: 4 (lower is better)
Translates to: QLVKGDAFYLTASGGETHSLLFC*FVEDFR
Trigger: GCGGAAATCCTCAACAAAGCAACAGAAAAGGAGAGA...GTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR GCA 90 bp CCTAAATTTGAGGTTTCCATGGTAAAGGGCTCAAATCCAGTTTTCCAACGATGGAAGGACTGTGTGGGCTaGCAGGCTTGTCGTTATAGC +
Preference number: 4 (lower is better)
Translates to: PKFEVSMVKGSNPVFQRWKDCVG*QACRYS
Trigger: GCTATAACGACAAGCCTGGCAGCCCACACAGTCCTT...CCATCGTTGGAAAACTGGATTTGAGCCCTTTACCATGGAAACCTCAAATTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS-3UTR CCA 90 bp AAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATTTCTTCTCTCTCAGTTaGTCAAAGGATGCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KALQCLGLVLPQQLVKGDFFSLS*SKDAFL
Trigger: CAGAAAAGCATCCTTTGACCAACTGAGAGAGAAGAA...ATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp ACAGTCTTCTGGGGCTCTGGGTTCTTAGCCTTAAGCTaGAGGCCTTTCTCAAACTCAGAGTCTGTGTTATTG +
Preference number: 4 (lower is better)
Translates to: TVFWGSGFLALS*RPFSNSESVLL
Trigger: CAATAACACAGACTCTGAGTTTGAGAAAGGCCTCAAGCTTAAGGCTAAGAACCCAGAGCCCCAGAAGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp TCAAAGGCAGCGTCCTCCCTGTACAGCTTTTCCTTTTaGAGTTTCTCTTTGTCCTCTTTGAAGGCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SKAASSLYSFSF*SFSLSSLKAFS
Trigger: GGAGAAGGCCTTCAAAGAGGACAAAGAGAAACTCAAAAAGGAAAAGCTGTACAGGGAGGACGCTGCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR GCA 90 bp ACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACATCTGTGAAAATGTCTaGAATGTACCAGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TATGKRRCFLPHCIWRGDICENV*NVPALL
Trigger: GAGAAGAGCTGGTACATTGCAGACATTTTCACAGAT...GTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
3UTR CAA 72 bp AGGACTACACCATATATCTCTCCTGAGAGGCCACTGTaGTTCTTCAGCTTACTGTGTTCCTATAGTTGTGAC +
Preference number: 4 (lower is better)
Translates to: RTTPYISPERPL*FFSLLCSYSCD
Trigger: GTCACAACTATAGGAACACAGTAAGCTGAAGAACAACAGTGGCCTCTCAGGAGAGATATATGGTGTAGTCCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS-3UTR GCA 90 bp TTAAAGAGCCAGTCCTTATCCTCCGGCTTCATCCTACCGAGCTTATCTTCTTTCAGAGCAAAGTCTTCTTaGTGTGGTGTTTTAGAACAC +
Preference number: 4 (lower is better)
Translates to: LKSQSLSSGFILPSLSSFRAKSS*CGVLEH
Trigger: GTGTTCTAAAACACCACAGCAAGAAGACTTTGCTCT...GAAAGAAGATAAGCTCGGTAGGATGAAGCCGGAGGATAAGGACTGGCTCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp ATTTTGTTGTCGCGCTTCTTTTCCTTACTGTCTTCTTaGACAGTTTCCAGGATAAGTTTGGCCACCGAGTCA +
Preference number: 4 (lower is better)
Translates to: ILLSRFFSLLSS*TVSRISLATES
Trigger: TGACTCGGTGGCCAAACTTATCCTGGAAACTGTCAAAGAAGACAGTAAGGAAAAGAAGCGCGACAACAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp TTCTCTCTCAGTTGGTCAAAGGATGCTTTTCTGTCTTaGCTGTGTATGTCTTTATGCTTTTCCTTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: FSLSWSKDAFLS*LCMSLCFSLPS
Trigger: AGACGGCAAGGAAAAGCATAAAGACATACACAGCAAAGACAGAAAAGCATCCTTTGACCAACTGAGAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
3UTR CAA 72 bp AAGAAAGAGTCTTTAAAATCTCGCTTCTCCCGGATTTaGTTGTCGCGCTTCTTTTCCTTACTGTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: KKESLKSRFSRI*LSRFFSLLSSL
Trigger: CAAAGAAGACAGTAAGGAAAAGAAGCGCGACAACAAAATCCGGGAGAAGCGAGATTTTAAAGACTCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR CAA 90 bp TCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTGGCCTCTGTGGCCTaGAAGCTGCCGGCCACGCAA +
Preference number: 5 (lower is better)
Translates to: SLGSSHLMDAVLPPPLPGLASVA*KLPATQ
Trigger: TTGCGTGGCCGGCAGCTTCAAGGCCACAGAGGCCAG...TCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTGCACTGTCCCTGGCCTaGTCCTCTGCTGGGGGCTCA +
Preference number: 5 (lower is better)
Translates to: SGLLPLDGRGAPSSAAGTALSLA*SSAGGS
Trigger: TGAGCCCCCAGCAGAGGACAAGGCCAGGGACAGTGC...AGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS GCA 90 bp AACCAGTGTTGCTCAGGAATGGGTATGAACTCCAGCAGGGCAGTATaGTCCGGCTCCGAGGGCGACGCGGCTCCGCGGCGGAACGGCGGC +
Preference number: 5 (lower is better)
Translates to: NQCCSGMGMNSSRAV*SGSEGDAAPRRNGG
Trigger: GCCGCCGTTCCGCCGCGGAGCCGCGTCGCCCTCGGAGCCGGAGCATACTGCCCTGCTGGAGTTCATACCCATTCCTGAGCAACACTGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS-3UTR CAA 90 bp GGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTCATCGAACCACATCCAGCTTaGGCTCCTCTGAGGGCTCGG +
Preference number: 5 (lower is better)
Translates to: GSSHLMDAVLPPPLPGLIEPHPA*APLRAR
Trigger: CCGAGCCCTCAGAGGAGCCAAAGCTGGATGTGGTTC...GATGAGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp CGGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTTCCCGGAGGCTGCTGTaGAGGGGGACTGGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: RSPCPKAWQSSAVSGPCASRRLL*RGTGCW
Trigger: CCAGCACCCAGTCCCCCTCAACAGCAGCCTCCGGGA...AGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTGGAACTTCTTCCACCTaGGGGGCCTTAGGGACCTCA +
Preference number: 5 (lower is better)
Translates to: SGLLPLDGRGAPSSAAGTGTSST*GALGTS
Trigger: TGAGGTCCCTAAGGCCCCCAAGGTGGAAGAAGTTCC...AGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACTCACTGATGAGTTCCTaGATGCGCCGGGCATCCCCT +
Preference number: 5 (lower is better)
Translates to: GGETHGQVQSLGSSHLMDSLMSS*MRRASP
Trigger: AGGGGATGCCCGGCGCATCAAGGAACTCATCAGTGA...GTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCGGCTCCTTGACCTTTTaGTCCAGCCCCAGAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SLHLEGRHTARCSLWAPPGSLTF*SSPRAF
Trigger: GAAGGCTCTGGGGCTGGACAAAAAGGTCAAGGAGCC...GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp ACCCAGAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGTGGGAGCCGGCTCCTaGACCTTTTTGTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: TQRAWLTQSHLVCGHGLLVGAGS*TFLSSP
Trigger: GGGGCTGGACAAAAAGGTCAAGGAGCCGGCTCCCAC...AAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGTCCCGAGGCCTCTGCACTGTaGTGTGCCTGTGCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: EGMADTEPPCLWPRSPCPEASAL*CACAKP
Trigger: TGGCTTGGCACAGGCACACAACAGTGCAGAGGCCTC...GGGACAAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCAGGCTGGGGTGGGCATaGGGTCCTTCTCTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VSLSQGLAKLCSVWALCSRLGWA*GPSLLQ
Trigger: CTGCAGCAGAGAAGGACCCAATGCCCACCCCAGCCT...GGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp ACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTGGTCAGTCCCGTCCTaGAGGAGTCTGACAAAGAAC +
Preference number: 5 (lower is better)
Translates to: TRPGAVSGLLPLDGRGAPWSVPS*RSLTKN
Trigger: GTTCTTTGTCAGACTCCTCAAGGACGGGACTGACCA...GGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCTGCTTCATGCGCTCCTaGTGTCGCTTGTGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: VSLSQGLAKLCSVWALCSCFMRS*CRLCRS
Trigger: GGAGCGGCACAAGCGACACAAGGAGCGCATGAAGCA...GGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCGTGGGCTTCTTCTCTTaGAGCTTGGGGTCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: SLHLEGRHTARCSLWAPPVGFFS*SLGSPD
Trigger: GTCTGGAGACCCCAAGCTCAAAGAGAAGAAGCCCAC...GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGTCCCGGTGCTGGCACCGAATaGGAGATTGAGGCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: EGMADTEPPCLWPRSPCPGAGTE*EIEASG
Trigger: CCCTGAAGCCTCAATCTCCAATTCGGTGCCAGCACC...GGGACAAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTTTCTCCACCATGTCGTaGCTGAGAGCAAAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SGLLPLDGRGAPSSAAGTFSTMS*LRAKSS
Trigger: AGAAGACTTTGCTCTCAGCAACGACATGGTGGAGAA...AGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
CDS-3UTR CAA 90 bp TCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGAAAACCACCTCTCTTGTaGGTCATCAGAGAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SLGSSHLMDAVLPPPLPGKPPLL*VIREAE
Trigger: TTCAGCCTCTCTGATGACCAACAAGAGAGGTGGTTT...TCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAGGGCTCCAGGTTCTaGGGGAAGTCACAGTCTGAC +
Preference number: 5 (lower is better)
Translates to: VSLSQGLAKLCSVWALCSQGSRF*GKSQSD
Trigger: GTCAGACTGTGACTTCCCCAAGAACCTGGAGCCCTG...GGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp ACCCAGAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTAGATGGCCACTGGGATaGCTCCTGTCCCACCGTCTT +
Preference number: 5 (lower is better)
Translates to: TQRAWLTQSHLVCGHGLLRWPLG*LLSHRL
Trigger: AAGACGGTGGGACAGGAGCAATCCCAGTGGCCATCT...AAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACCCTTATCTTTGGTTTTaGAGGCAGAGTTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: GGETHGQVQSLGSSHLMDPYLWF*RQSWGS
Trigger: GGACCCCCAACTCTGCCTCAAAAACCAAAGATAAGG...GTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCTCTGGGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGATCTTTGTTGGCATCCTaGATTCTCTTCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: SLGSSHLMDAVLPPPLPGSLLAS*ILFSTF
Trigger: GAAGGTGCTGAAGAGAATCAAGGATGCCAACAAAGA...TCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCCCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCGCCTTCTCCTTCTCCTaGGAGAGCTTGTCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: YLTASGGETHGQVQSLGSAFSFS*ESLSSF
Trigger: GAAAGAGGACAAGCTCTCCAAGGAGAAGGAGAAGGC...GGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp ACCCAGAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTTCGCTGGACTTCTCTTaGTACTTGTCTGCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: TQRAWLTQSHLVCGHGLLSLDFS*YLSALP
Trigger: GGGCAGGGCAGACAAGTACAAAGAGAAGTCCAGCGA...AAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp ACCCAGAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTTGGGCTCTTTGTCTCTaGGCTTCTCTGTGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: TQRAWLTQSHLVCGHGLLWALCL*ASLCAA
Trigger: GGCAGCACACAGAGAAGCCAAGAGACAAAGAGCCCA...AAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAAGCCGTCCACATGCTaGTCCCTGTGTCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SPCPKAWQSSAVSGPCAPKPSTC*SLCLSF
Trigger: GAAGGAGAGACACAGGGACAAGCATGTGGACGGCTT...GGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCCCGCTTGCGGGGATGTaGGGCCTGGGCATCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFPLAGM*GLGIFL
Trigger: GAGGAAGATGCCCAGGCCCAACATCCCCGCAAGCGG...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCGAAATGGCTTTCCAATaGTCAGTGCGCCAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: YLTASGGETHGQVQSLGSEMAFQ*SVRQCF
Trigger: GAAGCACTGGCGCACTGACAATTGGAAAGCCATTTC...GGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACCTGGAAGCTCGGTCTTaGGACTTTTTCTTCCTTTCC +
Preference number: 5 (lower is better)
Translates to: GGETHGQVQSLGSSHLMDLEARS*DFFFLS
Trigger: GGAAAGGAAGAAAAAGTCCAAAGACCGAGCTTCCAG...GTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGCTCCTCCCACTTGATGGACGCGGTGCTCCCTCCTCCGCTGCCGGGACTCATCCAGCTGTCCTCTCCTTaGAAATCAAAAGAGGAATCA +
Preference number: 5 (lower is better)
Translates to: GSSHLMDAVLPPPLPGLIQLSSP*KSKEES
Trigger: TGATTCCTCTTTTGATTTCAAAGGAGAGGACAGCTG...GATGAGTCCCGGCAGCGGAGGAGGGAGCACCGCGTCCATCAAGTGGGAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp ACCCAGAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTTTGGGAGGGTTGTCCTaGTCTTTGGCTGCAGGCTTT +
Preference number: 5 (lower is better)
Translates to: TQRAWLTQSHLVCGHGLLLGGLS*SLAAGF
Trigger: AAAGCCTGCAGCCAAAGACAAGGACAACCCTCCCAA...AAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAAGGAGTTGGGAGGGTaGTCCTTGTCTTTGGCTGCA +
Preference number: 5 (lower is better)
Translates to: SPCPKAWQSSAVSGPCAPKELGG*SLSLAA
Trigger: TGCAGCCAAAGACAAGGACAACCCTCCCAACTCCTT...GGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGCGCGCTCTGTGTTCTCCTaGAACTTTTCCTTCAGCTTA +
Preference number: 5 (lower is better)
Translates to: GETHGQVQSLGSSHLMDARSVFS*NFSFSL
Trigger: TAAGCTGAAGGAAAAGTTCAAGGAGAACACAGAGCG...CGCGTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCAACCCGAAGAATCTCTaGCTCACAGGACACAATCAG +
Preference number: 5 (lower is better)
Translates to: SLHLEGRHTARCSLWAPPNPKNL*LTGHNQ
Trigger: CTGATTGTGTCCTGTGAGCAAGAGATTCTTCGGGTT...GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS GCA 90 bp ACAGATCCTCCCAGGTCAGAGGGATGTGTGTCCTCCTGTAACAGATaGTACAAGCAGCACCCAGGCCTTCCAGAAGGACTGTGTGGGCTG +
Preference number: 5 (lower is better)
Translates to: TDPPRSEGCVSSCNR*YKQHPGLPEGLCGL
Trigger: CAGCCCACACAGTCCTTCTGGAAGGCCTGGGTGCTGCTTGTAGCATCTGTTACAGGAGGACACACATCCCTCTGACCTGGGAGGATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS-3UTR CAA 90 bp GGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGCGCCGCGTTCATTTCTCTaGTTCACCTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: GETHGQVQSLGSSHLMDAPRSFL*FTLSLV
Trigger: AACCAAAGATAAGGTGAACAAGAGAAATGAACGCGG...CGCGTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp CTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAGGAGGTTCACCATCGTaGGCGAATTGGCTACTTTCA +
Preference number: 5 (lower is better)
Translates to: LLVPRPGKALQCLGLVLPGGSPS*ANWLLS
Trigger: TGAAAGTAGCCAATTCGCCAACGATGGTGAACCTCC...TGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp CTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCAGAAGTGTATGTGCCTTaGCCTAACAGGAGGTTCACC +
Preference number: 5 (lower is better)
Translates to: LLVPRPGKALQCLGLVLPEVYVP*PNRRFT
Trigger: GGTGAACCTCCTGTTAGGCAAAGGCACATACACTTC...TGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCGCTCTGCTCATGTCTTaGTTGGCATCCTTGATTCTC +
Preference number: 5 (lower is better)
Translates to: YLTASGGETHGQVQSLGSALLMS*LASLIL
Trigger: GAGAATCAAGGATGCCAACAAAGACATGAGCAGAGC...GGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp CTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTTCTCCTTGGAGAGCTaGTCCTCTTTCATGTCATTC +
Preference number: 5 (lower is better)
Translates to: LHLEGRHTARCSLWAPPTFSLES*SSFMSF
Trigger: GAATGACATGAAAGAGGACAAGCTCTCCAAGGAGAA...AGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCCTCTCTGCACACTCCTaGTCTTTCTTTTCTTTGTGC +
Preference number: 5 (lower is better)
Translates to: SLHLEGRHTARCSLWAPPLSAHS*SFFSLC
Trigger: GCACAAAGAAAAGAAAGACAAGGAGTGTGCAGAGAG...GGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCGAGACCTCGCTGATCTaGTCGTTGGAGTCCTCCCGG +
Preference number: 5 (lower is better)
Translates to: GPCAPTATGKRRCFLPHCETSLI*SLESSR
Trigger: CCGGGAGGACTCCAACGACAAGATCAGCGAGGTCTC...GCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCGGCTTTGGCTCGTCCTaGTGGTGTCTCAGGAAGCCG +
Preference number: 5 (lower is better)
Translates to: GPCAPTATGKRRCFLPHCGFGSS*WCLRKP
Trigger: CGGCTTCCTGAGACACCACAAGGACGAGCCAAAGCC...GCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGACCAGACAGCCAGTCTTaGGACTCTGTACCCGGTCCA +
Preference number: 5 (lower is better)
Translates to: GKALQCLGLVLPQQLVKGPDSQS*DSVPGP
Trigger: TGGACCGGGTACAGAGTCCAAAGACTGGCTGTCTGG...TCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCGCAGGTATGCCCTGCTaGCTCTGGCTTGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFAGMPC*LWLASI
Trigger: GATGCTGGCAAGCCAGAGCAAGCAGGGCATACCTGC...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp AATAAGGGAGGAGGAAGACAGGCCCTGCTCAGCAGCGGTGTGTGTCCACTCAACAGGACCGTACCAGCCTaGCAGTACCACAACATGGAC +
Preference number: 5 (lower is better)
Translates to: NKGGGRQALLSSGVCPLNRTVPA*QYHNMD
Trigger: GTCCATGTTGTGGTACTGCAAGGCTGGTACGGTCCT...GTTGAGTGGACACACACCGCTGCTGAGCAGGGCCTGTCTTCCTCCTCCCTTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172906.8
CDS-3UTR CAA 90 bp GGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAACTGGGAAGGGTGCTTaGGTGTTGTGTCTACCGGAC +
Preference number: 5 (lower is better)
Translates to: GKALQCLGLVLPQQLVKGTGKGA*VLCLPD
Trigger: GTCCGGTAGACACAACACCAAAGCACCCTTCCCAGT...TCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACGCGTTGTTCACCTTATCTTaGGTTTTTGAGGCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: GETHGQVQSLGSSHLMDALFTLS*VFEAEL
Trigger: CAACTCTGCCTCAAAAACCAAAGATAAGGTGAACAA...CGCGTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTGTCCCTTTTCTGTTGCTTTGTaGAGGATTTCCGCCATACCG +
Preference number: 5 (lower is better)
Translates to: EGMADTEPPCLWPRSPCPFSVAL*RISAIP
Trigger: CGGTATGGCGGAAATCCTCAACAAAGCAACAGAAAA...GGGACAAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCCTTCCTTGTCCAGCTaGGGGACAGCGCCATCCGTA +
Preference number: 5 (lower is better)
Translates to: SAVSGPCAPTATGKRRCFPSLSS*GTAPSV
Trigger: TACGGATGGCGCTGTCCCCAAGCTGGACAAGGAAGG...AAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCAGCCCCAGAGCCTTCTaGGAAGGAAAGTCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: GPCAPTATGKRRCFLPHCSPRAF*EGKSRL
Trigger: GAGCCTGGACTTTCCTTCCAAGAAGGCTCTGGGGCT...GCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGATCACTGCGGTCCAGCTaGGGAGTCTTGGTTAGAGAA +
Preference number: 5 (lower is better)
Translates to: GKALQCLGLVLPQQLVKGSLRSS*GVLVRE
Trigger: TTCTCTAACCAAGACTCCCAAGCTGGACCGCAGTGA...TCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
CDS-3UTR CAA 90 bp GGACTCATCGGCAGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACTTCTCTTTGTCCTCTTaGAAGGCCTTCTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GLIGSTGRPMWPLFVSCDFSLSS*KAFSFS
Trigger: GGAGAAGGAGAAGGCCTTCAAAGAGGACAAAGAGAA...GTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTCCCACTTGATGGACTCCTTACTGTCTTCTTaGACAGTTTCCAGGATAAGT +
Preference number: 5 (lower is better)
Translates to: GGETHGQVQSLGSSHLMDSLLSS*TVSRIS
Trigger: ACTTATCCTGGAAACTGTCAAAGAAGACAGTAAGGA...GTCCATCAAGTGGGAGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTTTGGCTGCAGGCTTaGGCTCGTCCTTGTGGTGTC +
Preference number: 5 (lower is better)
Translates to: SAVSGPCAPTATGKRRCFLWLQA*ARPCGV
Trigger: GACACCACAAGGACGAGCCAAAGCCTGCAGCCAAAG...AAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTGGTCTGCTGTCTTTCTaGCCGGAGTCTCTGGATGGC +
Preference number: 5 (lower is better)
Translates to: SAVSGPCAPTATGKRRCFGLLSF*PESLDG
Trigger: GCCATCCAGAGACTCCGGCAAGAAAGACAGCAGACC...AAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp ACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGTGCTGCCTGAACAGCTaGTCCCCAGCACTGAACTCC +
Preference number: 5 (lower is better)
Translates to: TGKRRCFLPHCIWRGDTRCCLNS*SPALNS
Trigger: GGAGTTCAGTGCTGGGGACAAGCTGTTCAGGCAGCA...CCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp CTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGGGCAAAAATGTTTaGGGGATTCTGCAAACCTCT +
Preference number: 5 (lower is better)
Translates to: LLVPRPGKALQCLGLVLPQGKNV*GILQTS
Trigger: AGAGGTTTGCAGAATCCCCAAAACATTTTTGCCCTG...TGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp AGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACCTTCCTCCGAGTGCATCTGGGTGTGACTaGCAGTTGCTGAAAAACGAC +
Preference number: 5 (lower is better)
Translates to: STGRPMWPLFVSCDLPPSASGCD*QLLKND
Trigger: GTCGTTTTTCAGCAACTGCAAGTCACACCCAGATGC...ACTCGGAGGAAGGTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp AGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACCTTCCTCCGAGTTTCTCCACCATGTCGTaGCTGAGAGCAAAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: STGRPMWPLFVSCDLPPSFSTMS*LRAKSS
Trigger: AGAAGACTTTGCTCTCAGCAACGACATGGTGGAGAA...ACTCGGAGGAAGGTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
CDS-3UTR CAA 90 bp ACCCAGAGGGCATGGCTGACACAGAGCCACCTTGTCTGTGGCCACGGTCTCCTTATCCTTTTTCCCAGTTaGTTTCTCCACCATGTCGTT +
Preference number: 5 (lower is better)
Translates to: TQRAWLTQSHLVCGHGLLILFPS*FLHHVV
Trigger: AACGACATGGTGGAGAAACAAACTGGGAAAAAGGAT...AAGGAGACCGTGGCCACAGACAAGGTGGCTCTGTGTCAGCCATGCCCTCTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
CDS-3UTR CAA 90 bp GGACTCATCGGCAGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACTTTCAGTTTAAGTTCTaGGCTGACGGAACACTGTCC +
Preference number: 5 (lower is better)
Translates to: GLIGSTGRPMWPLFVSCDFQFKF*ADGTLS
Trigger: GGACAGTGTTCCGTCAGCCAAGAACTTAAACTGAAA...GTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTCTGCCTTTTCCTTCTaGGCTCTTTCACGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFSAFSF*ALSRSW
Trigger: CCACGAGCGTGAAAGAGCCAAGAAGGAAAAGGCAGA...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp ACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACGGCTGCAGCCTCATGTaGCTGCCGCATCAGCAAACA +
Preference number: 5 (lower is better)
Translates to: TATGKRRCFLPHCIWRGDGCSLM*LPHQQT
Trigger: TGTTTGCTGATGCGGCAGCAACATGAGGCTGCAGCC...GTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGACTCATCGGCAGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACATCCTTTTTCCCAGTTaGTTTCTCCACCATGTCGTT +
Preference number: 5 (lower is better)
Translates to: GLIGSTGRPMWPLFVSCDILFPS*FLHHVV
Trigger: AACGACATGGTGGAGAAACAAACTGGGAAAAAGGAT...GTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCTGCCGATGAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000098334.13
ENSMUST00000172906.8
CDS-3UTR CAA 90 bp AGCACTGGGCGACCTATGTGGCCCTTGTTTGTGTCCTGTGACCTTCCTCCGAGTCACTGTCCCTTCTCCTaGTGTTTGTGTTTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: STGRPMWPLFVSCDLPPSHCPFS*CLCLCL
Trigger: CAAACACAAACACAAACACAAGGAGAAGGGACAGTG...ACTCGGAGGAAGGTCACAGGACACAAACAAGGGCCACATAGGTCGCCCAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCAAGTCACAGTCTGACTaGTCCTTGAAGCTGCTCTCG +
Preference number: 5 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFKSQSD*SLKLLS
Trigger: CGAGAGCAGCTTCAAGGACAAGTCAGACTGTGACTT...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp ACCTCACTGCATCTGGAGGGGAGACACACGGCCAGGTGCAGTCTCTGGGCTCCTTCTTTATGCTTTTCCTaGCCGTCTTTCTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: TSLHLEGRHTARCSLWAPSLCFS*PSFFSL
Trigger: TAAAGAGAAGAAAGACGGCAAGGAAAAGCATAAAGA...AGGAGCCCAGAGACTGCACCTGGCCGTGTGTCTCCCCTCCAGATGCAGTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp TCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTTGTCTACCGGACTATTaGCAGACTCCTCAGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SAVSGPCAPTATGKRRCFCLPDY*QTPQQS
Trigger: TGACTGCTGAGGAGTCTGCAAATAGTCCGGTAGACA...AAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGTCTCCTTGTCCCAAGGCCTGGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCTACAGCTTTTCCTTTTaGAGTTTCTCTTTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: GLLVPRPGKALQCLGLVLYSFSF*SFSLSS
Trigger: AGAGGACAAAGAGAAACTCAAAAAGGAAAAGCTGTA...GAGCACAAGGCCCAGACACTGCAGAGCTTTGCCAGGCCTTGGGACAAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp GGCAAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGATTCTCTGGCTTCTCCTaGTGTTTACTCTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: GKALQCLGLVLPQQLVKGFSGFS*CLLFTL
Trigger: CAAGGTGAAGAGTAAACACAAGGAGAAGCCAGAGAA...TCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp AAAGCTCTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATACATCTGAAGCATCTTaGGCCTGGAGAGGAAGCTCT +
Preference number: 5 (lower is better)
Translates to: KALQCLGLVLPQQLVKGDTSEAS*AWRGSS
Trigger: AGAGCTTCCTCTCCAGGCCAAAGATGCTTCAGATGT...ATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAGAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp CAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGACTTCTCTTTGTACTaGTCTGCCCTGCCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: QLVKGDAFYLTASGGETHDFSLY*SALPFS
Trigger: GGAAAAGGGCAGGGCAGACAAGTACAAAGAGAAGTC...GTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp AAGAAGAGCTATGTCTGGCATATCTTAGGGTTTCCTTCCCTACCGGAAGCCCTTCCTTATCTTTGGTTTTaGAGGCAGAGTTGGGGGTCC +
Preference number: 5 (lower is better)
Translates to: KKSYVWHILGFPSLPEALPYLWF*RQSWGS
Trigger: GGACCCCCAACTCTGCCTCAAAAACCAAAGATAAGG...AAGGGCTTCCGGTAGGGAAGGAAACCCTAAGATATGCCAGACATAGCTCTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS-3UTR CAA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCCAAGCGTGTTGTTTTTaGAGTAGCTCTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFQACCF*SSSSLP
Trigger: TGGAAGTGAAGAGCTACTCAAAAAACAACACGCTTG...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp ACAGCAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACTTTTCCTTGGGCTCTTaGTCTCTTGGCTTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: TATGKRRCFLPHCIWRGDFSLGS*SLGFSV
Trigger: CACAGAGAAGCCAAGAGACAAAGAGCCCAAGGAAAA...GTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp AACGATGGCTGGACGGCACCAACTAACAAATGGCCCTGTTTCTGCTGCATGTGTTGGCAAAAACCAGTGTaGCTCAGGAATGGGTATGAA +
Preference number: 5 (lower is better)
Translates to: NDGWTAPTNKWPCFCCMCWQKPV*LRNGYE
Trigger: TTCATACCCATTCCTGAGCAACACTGGTTTTTGCCA...ACACATGCAGCAGAAACAGGGCCATTTGTTAGTTGGTGCCGTCCAGCCATCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS-3UTR CAA 90 bp GAAAACTCATGGATGTATGAAGACTTAGATAGTGGCTCTTCCCTCCCAGTTTTATCACTGATGAGTTCCTaGATGCGCCGGGCATCCCCT +
Preference number: 5 (lower is better)
Translates to: ENSWMYEDLDSGSSLPVLSLMSS*MRRASP
Trigger: AGGGGATGCCCGGCGCATCAAGGAACTCATCAGTGA...TAAAACTGGGAGGGAAGAGCCACTATCTAAGTCTTCATACATCCATGAGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS-3UTR CAA 90 bp CTGCAGTGTCTGGGCCTTGTGCTCCCACAGCAACTGGTAAAAGGAGATGCTTTCTTCTTCCTTTCCTCTTaGTACAGTCTGAGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: LQCLGLVLPQQLVKGDAFFFLSS*YSLSFS
Trigger: AGAAAAGCTCAGACTGTACAAAGAGGAAAGGAAGAA...GAAAGCATCTCCTTTTACCAGTTGCTGTGGGAGCACAAGGCCCAGACACTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp AGCTGGCTCGTTCCTTCAGTGTGTGGGCTGTTGTCAGAATTTGGTTCCTGCAGTTTGTTCACCTTATCTTaGGTTTTTGAGGCAGAGTTG +
Preference number: 5 (lower is better)
Translates to: SWLVPSVCGLLSEFGSCSLFTLS*VFEAEL
Trigger: CAACTCTGCCTCAAAAACCAAAGATAAGGTGAACAA...ACTGCAGGAACCAAATTCTGACAACAGCCCACACACTGAAGGAACGAGCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS-3UTR CAA 90 bp TTAGCGCATGTGAGACTCTACTGCTGCTGTAACAAATCACCACAGCCTGCCTCACCGCGTTCATTTCTCTaGTTCACCTTATCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LAHVRLYCCCNKSPQPASPRSFL*FTLSLV
Trigger: AACCAAAGATAAGGTGAACAAGAGAAATGAACGCGG...TGAGGCAGGCTGTGGTGATTTGTTACAGCAGCAGTAGAGTCTCACATGCGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS-3UTR CAA 90 bp CAACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACTTCTTAGCCTTAAGCTaGAGGCCTTTCTCAAACTCA +
Preference number: 5 (lower is better)
Translates to: QLVKGDAFYLTASGGETHFLALS*RPFSNS
Trigger: TGAGTTTGAGAAAGGCCTCAAGCTTAAGGCTAAGAA...GTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS-3UTR CAA 90 bp ACTGGTAAAAGGAGATGCTTTCTACCTCACTGCATCTGGAGGGGAGACACACGGGATGCTTTTCTGTCTTaGCTGTGTATGTCTTTATGC +
Preference number: 5 (lower is better)
Translates to: TGKRRCFLPHCIWRGDTRDAFLS*LCMSLC
Trigger: GCATAAAGACATACACAGCAAAGACAGAAAAGCATC...CCGTGTGTCTCCCCTCCAGATGCAGTGAGGTAGAAAGCATCTCCTTTTACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS GCA 72 bp TGCTCAGGAATGGGTATGAACTCCAGCAGGGCAGTATaGTCCGGCTCCGAGGGCGACGCGGCTCCGCGGCGG +
Preference number: 6 (lower is better)
Translates to: CSGMGMNSSRAV*SGSEGDAAPRR
Trigger: CCGCCGCGGAGCCGCGTCGCCCTCGGAGCCGGAGCATACTGCCCTGCTGGAGTTCATACCCATTCCTGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS GCA 72 bp CGCTCGGGACCCTGCTTCTCTGTGTCCGAGTCCTTCTaGTCTCCATTGGCCCCCACGGTGAAGGGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: RSGPCFSVSESF*SPLAPTVKGSF
Trigger: GAAGCTGCCCTTCACCGTGGGGGCCAATGGAGAGCAGAAGGACTCGGACACAGAGAAGCAGGGTCCCGAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000098334.13
CDS GCA 72 bp CCCAGGTCAGAGGGATGTGTGTCCTCCTGTAACAGATaGTACAAGCAGCACCCAGGCCTTCCAGAAGGACTG +
Preference number: 6 (lower is better)
Translates to: PRSEGCVSSCNR*YKQHPGLPEGL
Trigger: CAGTCCTTCTGGAAGGCCTGGGTGCTGCTTGTAGCATCTGTTACAGGAGGACACACATCCCTCTGACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS CCA 72 bp GCTGCAGGGAGATGCCAACCTTGTAGTGCCCGTTGTTaGCGGCATCATGCAAAGGTGTGTCATCATCCAGGC +
Preference number: 6 (lower is better)
Translates to: AAGRCQPCSARC*RHHAKVCHHPG
Trigger: GCCTGGATGATGACACACCTTTGCATGATGCCGCCAACAACGGGCACTACAAGGTTGGCATCTCCCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212050.2
CDS TCA 72 bp ACACAAGAAAGCAGAGGCTTTAAGAAACATAGCAACTaGCAGATCCTCCCAGGTCAGAGGGATGTGTGTCCT +
Preference number: 6 (lower is better)
Translates to: TQESRGFKKHSN*QILPGQRDVCP
Trigger: AGGACACACATCCCTCTGACCTGGGAGGATCTGTCAGTTGCTATGTTTCTTAAAGCCTCTGCTTTCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212937.2
CDS CAA 72 bp TTATCCTTTTTCCCAGTTTGTTTCTCCACCATGTCGTaGCTGAGAGCAAAGTCTTCTTGCTGTGGTGTTTTA +
Preference number: 6 (lower is better)
Translates to: LSFFPVCFSTMS*LRAKSSCCGVL
Trigger: TAAAACACCACAGCAAGAAGACTTTGCTCTCAGCAACGACATGGTGGAGAAACAAACTGGGAAAAAGGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000098333.5
ENSMUST00000098334.13
ENSMUST00000172906.8