Pregenerated sensors for ANKRA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021661Ensembl transcript IDs: ENSMUST00000022164.16, ENSMUST00000091356.11, ENSMUST00000123924.8, ENSMUST00000150352.3, ENSMUST00000226100.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGTGAGGGAGGGCAGAGGGCGTTTCCCGAGTCTCCTCACTCCCTaGTGTTCTGAAGGAGTTTCAGCAGATGGGACTCGATGGCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: GVREGRGRFPSLLTP*CSEGVSADGTRWPV Trigger: AACAGGCCATCGAGTCCCATCTGCTGAAACTCCTTCAGAACATCAGGGAGTGAGGAGACTCGGGAAACGCCCTCTGCCCTCCCTCACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR GCA 90 bp | TGCTGCTCTGCTGGTCAAAGTGACTGTAGAGAGCCCACCCTACCCTaGAGTGTGTGGTCCTGTCAGACAAAACCCACTTGCATAGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: CCSAGQSDCREPTLP*SVWSCQTKPTCIEQ Trigger: CTGCTCTATGCAAGTGGGTTTTGTCTGACAGGACCACACACTGCAGGGTAGGGTGGGCTCTCTACAGTCACTTTGACCAGCAGAGCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| 3UTR TCA 90 bp | CGAAGTTTGAACCAACACTGGCTACTTAGTCATGCTGAACTGAACTaGATTGCCTTCTTGCCTCTTGAGTATATTGCTGCTCTGCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: RSLNQHWLLSHAELN*IAFLPLEYIAALLV Trigger: GACCAGCAGAGCAGCAATATACTCAAGAGGCAAGAAGGCAATTCAGTTCAGTTCAGCATGACTAAGTAGCCAGTGTTGGTTCAAACTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| 3UTR CCA 90 bp | TTACCTCAGTCAACCCTCACAGTTCTTCAATTCCTCTCTAGTCCATaGTTCCCTCTTCTGGATTTTAGTAAGAGGCAAGTTAATGACATT | + |
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Preference number: 1 (lower is better) Translates to: LPQSTLTVLQFLSSP*FPLLDFSKRQVNDI Trigger: AATGTCATTAACTTGCCTCTTACTAAAATCCAGAAGAGGGAACCATGGACTAGAGAGGAATTGAAGAACTGTGAGGGTTGACTGAGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| 3UTR-3UTR GCA 90 bp | TGCTTAAATATGCCTAAAATAAACTACTTGGGGTCAGACTCTCGAAGTTTGAACCCCCAACCCCACTCCTaGAAGAGCAGCCGCGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: CLNMPKINYLGSDSRSLNPQPHS*KSSRAQ Trigger: TTGAGCGCGGCTGCTCTTGCAGGAGTGGGGTTGGGG...GTTCAAACTTCGAGAGTCTGACCCCAAGTAGTTTATTTTAGGCATATTTAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| 3UTR-3UTR TCA 90 bp | ACCCTGCAGTGTGTGGTCCTGTCAGACAAAACCCACTTGCATAGAGCAGCATTAGATGGGCGTCTTTGTTaGTCAATTTGCATAACAGAA | + |
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Preference number: 2 (lower is better) Translates to: TLQCVVLSDKTHLHRAALDGRLC*SICITE Trigger: TTCTGTTATGCAAATTGATCAACAAAGACGCCCATC...TAATGCTGCTCTATGCAAGTGGGTTTTGTCTGACAGGACCACACACTGCAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTTGCCTCTTGAGTATATTGCTGCTCTGCTGGTCAAAGTGACTGTAGAGAGCCGGCCATTTTTCAGATaGATTTACCTCAGTCAACCC | + |
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Preference number: 2 (lower is better) Translates to: FLPLEYIAALLVKVTVESRPFFR*IYLSQP Trigger: GGGTTGACTGAGGTAAATTCATCTGAAAAATGGCCG...GCTCTCTACAGTCACTTTGACCAGCAGAGCAGCAATATACTCAAGAGGCAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| 3UTR-3UTR CCA 90 bp | TTCCACAAGAACATTATTTCCCTCCCACACACTTACAGTAAGCCCTGTGCAAAGCGGGGTCTGTTTACTTaGCACTTCATTAAAGCCTAT | + |
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Preference number: 2 (lower is better) Translates to: FHKNIISLPHTYSKPCAKRGLFT*HFIKAY Trigger: ATAGGCTTTAATGAAGTGCCAAGTAAACAGACCCCG...CTTTGCACAGGGCTTACTGTAAGTGTGTGGGAGGGAAATAATGTTCTTGTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR-3UTR TCA 90 bp | GTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGTAGTCTCCTCACTCCCTaGTGTTCTGAAGGAGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: VKLCYLIQRLTTTCTIKGSLLTP*CSEGVS Trigger: TGAAACTCCTTCAGAACATCAGGGAGTGAGGAGACT...ACCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR-3UTR CCA 90 bp | AACTATCTGAGTTTATGGAAAAGTACAATAAGTGAACTCCGCCCTTCGCTTTACGCAATGAAGACGGTTTaGAGCACTGGCATTCCTATA | + |
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Preference number: 2 (lower is better) Translates to: NYLSLWKSTISELRPSLYAMKTV*STGIPI Trigger: TATAGGAATGCCAGTGCTCCAAACCGTCTTCATTGC...GTAAAGCGAAGGGCGGAGTTCACTTATTGTACTTTTCCATAAACTCAGATAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR-3UTR TCA 90 bp | GTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGTGAAAAGTACAATAAGTaGACTCCGCCCTTCGCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: VKLCYLIQRLTTTCTIKGEKYNK*TPPFAL Trigger: TAAAGCGAAGGGCGGAGTTCACTTATTGTACTTTTC...ACCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR CAA 90 bp | TTTCAACAAATTGTGCTGTGCTTAAATATGCCTAAAATAAACTACTaGGGGTCAGACTCTCGAAGTTTGAACCAACACTGGCTACTTAGT | + |
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Preference number: 2 (lower is better) Translates to: FQQIVLCLNMPKINY*GSDSRSLNQHWLLS Trigger: ACTAAGTAGCCAGTGTTGGTTCAAACTTCGAGAGTCTGACCCCAAGTAGTTTATTTTAGGCATATTTAAGCACAGCACAATTTGTTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTGCAAAGTCAAAAGAGTGAATACAAGAGTAAAGACAAACAAGTTGGAGTTTCCGAGTTTTCTGAACTaGGCTTTTATTACACAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LCKVKRVNTRVKTNKLEFPSFLN*AFITQC Trigger: GCACTGTGTAATAAAAGCTCAGTTCAGAAAACTCGG...AAACTCCAACTTGTTTGTCTTTACTCTTGTATTCACTCTTTTGACTTTGCACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTGCAAAGTCAAAAGAGTGAATACAAGAGTAAAGACAAACAAGTTGGAGTTTAGCTTCCGAGTTTTCTaGACTGAGCTTTTATTACAC | + |
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Preference number: 2 (lower is better) Translates to: LCKVKRVNTRVKTNKLEFSFRVF*TELLLH Trigger: GTGTAATAAAAGCTCAGTTCAGAAAACTCGGAAGCT...AAACTCCAACTTGTTTGTCTTTACTCTTGTATTCACTCTTTTGACTTTGCACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGTACTACAGTGTTTTATaGATGAAAGCAATGAAGACG | + |
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Preference number: 2 (lower is better) Translates to: CQIVLLDTKTHNHLYHKRYYSVL*MKAMKT Trigger: CGTCTTCATTGCTTTCATGCATAAAACACTGTAGTA...CCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR-3UTR GCA 90 bp | ACCATCACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACACACTACTACAGTGTTTTATaGATGAAAGCAATGAAGACG | + |
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Preference number: 2 (lower is better) Translates to: TITLYFLIPQEHYFPPTHYYSVL*MKAMKT Trigger: CGTCTTCATTGCTTTCATGCATAAAACACTGTAGTA...GTGTGTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTGATGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR GCA 72 bp | CACACAGAGACACAAGAGCAAGCACACAAAAGTCACTaGGTCAGCTCAACCGAGCCCTGGGATTCTGTACAA | + |
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Preference number: 3 (lower is better) Translates to: HTETQEQAHKSH*VSSTEPWDSVQ Trigger: TTGTACAGAATCCCAGGGCTCGGTTGAGCTGACGCAGTGACTTTTGTGTGCTTGCTCTTGTGTCTCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR-3UTR CAA 90 bp | CACCCTACCCTGCAGTGTGTGGTCCTGTCAGACAAAACCCACTTGCATAGAGCAAGATGGGCGTCTTTGTaGATCAATTTGCATAACAGA | + |
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Preference number: 3 (lower is better) Translates to: HPTLQCVVLSDKTHLHRARWASL*INLHNR Trigger: TCTGTTATGCAAATTGATCAACAAAGACGCCCATCT...TGCTCTATGCAAGTGGGTTTTGTCTGACAGGACCACACACTGCAGGGTAGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| 3UTR TCA 72 bp | AACCAACACTGGCTACTTAGTCATGCTGAACTGAACTaGATTGCCTTCTTGCCTCTTGAGTATATTGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: NQHWLLSHAELN*IAFLPLEYIAA Trigger: AGCAGCAATATACTCAAGAGGCAAGAAGGCAATTCAGTTCAGTTCAGCATGACTAAGTAGCCAGTGTTGGTT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| 3UTR GCA 72 bp | AGCCTATGTCTGGAGTTAGAATACTACAGTGTTTTATaGATGAAAGCAATGAAGACGGTTTGGAGCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: SLCLELEYYSVL*MKAMKTVWSTG Trigger: GCCAGTGCTCCAAACCGTCTTCATTGCTTTCATGCATAAAACACTGTAGTATTCTAACTCCAGACATAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR CCA 72 bp | TCAACCCTCACAGTTCTTCAATTCCTCTCTAGTCCATaGTTCCCTCTTCTGGATTTTAGTAAGAGGCAAGTT | + |
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Preference number: 3 (lower is better) Translates to: STLTVLQFLSSP*FPLLDFSKRQV Trigger: AACTTGCCTCTTACTAAAATCCAGAAGAGGGAACCATGGACTAGAGAGGAATTGAAGAACTGTGAGGGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| 3UTR-3UTR CAA 90 bp | TGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGAGCAATGAAGACGGTTaGGAGCACTGGCATTCCTAT | + |
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Preference number: 3 (lower is better) Translates to: CQIVLLDTKTHNHLYHKRSNEDG*EHWHSY Trigger: ATAGGAATGCCAGTGCTCCAAACCGTCTTCATTGCT...CCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR-3UTR CAA 90 bp | TTAAAGTGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAGCAATGAAGACGGTTaGGAGCACTGGCATTCCTAT | + |
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Preference number: 3 (lower is better) Translates to: LKCQIVLLDTKTHNHLYHSNEDG*EHWHSY Trigger: ATAGGAATGCCAGTGCTCCAAACCGTCTTCATTGCT...ATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACACTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGTGCAAAGTCAAAAGAGTGAATACAAGAGTAAAGACAAACAAGTTGGAGGTCAAATTGTGCTACTaGATACAAAGACTCACAACC | + |
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Preference number: 3 (lower is better) Translates to: ALCKVKRVNTRVKTNKLEVKLCY*IQRLTT Trigger: GGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGAC...CTCCAACTTGTTTGTCTTTACTCTTGTATTCACTCTTTTGACTTTGCACAGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
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| 3UTR CCA 72 bp | ACTGTCCACTTTTCTTCCAGTAACTATCTGAGTTTATaGAAAAGTACAATAAGTGAACTCCGCCCTTCGCTT | + |
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Preference number: 3 (lower is better) Translates to: TVHFSSSNYLSL*KSTISELRPSL Trigger: AAGCGAAGGGCGGAGTTCACTTATTGTACTTTTCCATAAACTCAGATAGTTACTGGAAGAAAAGTGGACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| CDS-3UTR CCA 90 bp | TGGGACCCCAACCCCACTCCTGCAAGAGCAGCCGCGCTCAAGCACCAGGGCACCTCTTCCACGATCAGCTaGGCCCCAATGTCCAGATTT | + |
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Preference number: 4 (lower is better) Translates to: WDPNPTPARAAALKHQGTSSTIS*APMSRF Trigger: AAATCTGGACATTGGGGCCCAGCTGATCGTGGAAGA...GGTGCCCTGGTGCTTGAGCGCGGCTGCTCTTGCAGGAGTGGGGTTGGGGTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| CDS-3UTR TCA 90 bp | TGGGACCCCAACCCCACTCCTGCAAGAGCAGCCGCGCTCAAGCACCAGGGCACCATCGGTTTGGCAATATaGATTTCATCCCCATGGCGA | + |
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Preference number: 4 (lower is better) Translates to: WDPNPTPARAAALKHQGTIGLAI*ISSPWR Trigger: TCGCCATGGGGATGAAATTCATATTGCCAAACCGAT...GGTGCCCTGGTGCTTGAGCGCGGCTGCTCTTGCAGGAGTGGGGTTGGGGTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| CDS-3UTR GCA 90 bp | ACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGCGTTTCCCGAGTCTCTGTCTGTGTAGCCCTTaGTACAGGCAAGAGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: TIIKDQGVREGRGRFPSLCLCSP*YRQETE Trigger: CTCTGTCTCTTGCCTGTAGCAAGGGCTACACAGACA...GAGACTCGGGAAACGCCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
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| CDS-3UTR CCA 90 bp | ACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGCGTTTCCCGAGTCTCTCTTCCACGATCAGCTaGGCCCCAATGTCCAGATTT | + |
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Preference number: 4 (lower is better) Translates to: TIIKDQGVREGRGRFPSLSSTIS*APMSRF Trigger: AAATCTGGACATTGGGGCCCAGCTGATCGTGGAAGA...GAGACTCGGGAAACGCCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
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| 3UTR CAA 72 bp | TTGTCGCCATCTGAGGACAATGTGCGACAGCTACCCTaGACATTAAGGCTGCTTCTAATTCAGCCGCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSPSEDNVRQLP*TLRLLLIQPLP Trigger: GGGCAGCGGCTGAATTAGAAGCAGCCTTAATGTCAAGGGTAGCTGTCGCACATTGTCCTCAGATGGCGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| CDS-3UTR GCA 90 bp | CATGTAAACAAAACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGCGTAGCTATTTGCCCATGTaGCGCAGCCCACATCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: HVNKTIIKDQGVREGRGRSYLPM*RSPHQG Trigger: CCCCTGATGTGGGCTGCGGCACATGGGCAAATAGCT...ACGCCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGTTTTGTTTACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
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| CDS-3UTR GCA 90 bp | CCTCAGTCAACCCTCACAGTTCTTCAATTCCTCTCTAGTCCATGGTTCCCTCTTAGCTATTTGCCCATGTaGCGCAGCCCACATCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PQSTLTVLQFLSSPWFPLSYLPM*RSPHQG Trigger: CCCCTGATGTGGGCTGCGGCACATGGGCAAATAGCT...AAGAGGGAACCATGGACTAGAGAGGAATTGAAGAACTGTGAGGGTTGACTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| CDS-3UTR TCA 90 bp | GAGACACAAGAGCAAGCACACAAAAGTCACTGCGTCAGCTCAACCGAGCCCTGGAGTCAAGCAGCATTTTaGCAATGTCTGTGTAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ETQEQAHKSHCVSSTEPWSQAAF*QCLCSP Trigger: AGGGCTACACAGACATTGTCAAAATGCTGCTTGACT...CCAGGGCTCGGTTGAGCTGACGCAGTGACTTTTGTGTGCTTGCTCTTGTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| CDS-3UTR GCA 90 bp | TTACATGTAAACAAAACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGAGCTATTTGCCCATGTaGCGCAGCCCACATCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: LHVNKTIIKDQGVREGRGSYLPM*RSPHQG Trigger: CCCCTGATGTGGGCTGCGGCACATGGGCAAATAGCT...CCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGTTTTGTTTACATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
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| CDS-3UTR GCA 90 bp | TTCTTGCCTCTTGAGTATATTGCTGCTCTGCTGGTCAAAGTGACTGTAGAGAGCTCTACCACAGCTATTTaGCCATGTGCCGCAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FLPLEYIAALLVKVTVESSTTAI*PCAAAH Trigger: GTGGGCTGCGGCACATGGGCAAATAGCTGTGGTAGA...GCTCTCTACAGTCACTTTGACCAGCAGAGCAGCAATATACTCAAGAGGCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| CDS-3UTR GCA 90 bp | ACAAGAACATTATTTCCCTCCCACACACTTACAGTAAGCCCTGTGCAAAGTCAACATCTCTCCCTGGGCTaGCAACTGGTGAGCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: TRTLFPSHTLTVSPVQSQHLSLG*QLVSRQ Trigger: CTGTCTGCTCACCAGTTGGCAGCCCAGGGAGAGATG...TTGACTTTGCACAGGGCTTACTGTAAGTGTGTGGGAGGGAAATAATGTTCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
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| CDS-3UTR GCA 90 bp | TTACATGTAAACAAAACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGTCTACCACAGCTATTTaGCCATGTGCCGCAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LHVNKTIIKDQGVREGRGSTTAI*PCAAAH Trigger: GTGGGCTGCGGCACATGGGCAAATAGCTGTGGTAGA...CCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGTTTTGTTTACATGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
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| CDS-3UTR TCA 90 bp | CCTCAGTCAACCCTCACAGTTCTTCAATTCCTCTCTAGTCCATGGTTCCCTCTTGGATCTGCACCATTCTaGAGAAGGAACTCTACCACA | + |
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Preference number: 4 (lower is better) Translates to: PQSTLTVLQFLSSPWFPLGSAPF*RRNSTT Trigger: TGTGGTAGAGTTCCTTCTTCAGAATGGTGCAGATCC...AAGAGGGAACCATGGACTAGAGAGGAATTGAAGAACTGTGAGGGTTGACTGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| CDS-3UTR TCA 90 bp | CATGTAAACAAAACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGCGTGGATCTGCACCATTCTaGAGAAGGAACTCTACCACA | + |
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Preference number: 4 (lower is better) Translates to: HVNKTIIKDQGVREGRGRGSAPF*RRNSTT Trigger: TGTGGTAGAGTTCCTTCTTCAGAATGGTGCAGATCC...ACGCCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGTTTTGTTTACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
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| CDS-3UTR GCA 90 bp | TCCTCTAGCAGGGTTAAAGAGCAGCTCGCTTCTCTTTTACGACTTTCCTTCTCATGTCTGTGTAGCCCTTaGTACAGGCAAGAGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: SSSRVKEQLASLLRLSFSCLCSP*YRQETE Trigger: CTCTGTCTCTTGCCTGTAGCAAGGGCTACACAGACA...TGAGAAGGAAAGTCGTAAAAGAGAAGCGAGCTGCTCTTTAACCCTGCTAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| CDS-3UTR GCA 90 bp | TTCCACAAGAACATTATTTCCCTCCCACACACTTACAGTAAGCCCTGTGCAAAGTGTCTGTGTAGCCCTTaGTACAGGCAAGAGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: FHKNIISLPHTYSKPCAKCLCSP*YRQETE Trigger: CTCTGTCTCTTGCCTGTAGCAAGGGCTACACAGACA...CTTTGCACAGGGCTTACTGTAAGTGTGTGGGAGGGAAATAATGTTCTTGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
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| CDS-3UTR CCA 90 bp | TTCCACAAGAACATTATTTCCCTCCCACACACTTACAGTAAGCCCTGTGCAAAGTCTTCCACGATCAGCTaGGCCCCAATGTCCAGATTT | + |
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Preference number: 4 (lower is better) Translates to: FHKNIISLPHTYSKPCAKSSTIS*APMSRF Trigger: AAATCTGGACATTGGGGCCCAGCTGATCGTGGAAGA...CTTTGCACAGGGCTTACTGTAAGTGTGTGGGAGGGAAATAATGTTCTTGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
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| CDS-3UTR TCA 90 bp | CCCTTACTTCTCTTTTTCTCGTGTTCCCCAGATCGAGGCTATACGGTTTACCACTCCAGTCATATTCATTaGCGTCAACTCCACAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: PLLLFFSCSPDRGYTVYHSSHIH*RQLHSQ Trigger: TTGACTGTGGAGTTGACGTCAATGAATATGACTGGA...GTGGTAAACCGTATAGCCTCGATCTGGGGAACACGAGAAAAAGAGAAGTAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| CDS-3UTR GCA 90 bp | AGTGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAACATCTCTCCCTGGGCTaGCAACTGGTGAGCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SVKLCYLIQRLTTTCTIKHLSLG*QLVSRQ Trigger: CTGTCTGCTCACCAGTTGGCAGCCCAGGGAGAGATG...TTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAAGCTATTTGCCCATGTaGCGCAGCCCACATCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVKLCYLIQRLTTTCTIKSYLPM*RSPHQG Trigger: CCCCTGATGTGGGCTGCGGCACATGGGCAAATAGCT...TTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAGTGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAGCTATTTGCCCATGTaGCGCAGCCCACATCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKCQIVLLDTKTHNHLYHSYLPM*RSPHQG Trigger: CCCCTGATGTGGGCTGCGGCACATGGGCAAATAGCT...ATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACACTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGAACATTATTTCCCTCCCACACACTTACAGTAAGCCCTGTGCAAAGTCAATGTCTGTGTAGCCCTTaGTACAGGCAAGAGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRTLFPSHTLTVSPVQSQCLCSP*YRQETE Trigger: CTCTGTCTCTTGCCTGTAGCAAGGGCTACACAGACA...TTGACTTTGCACAGGGCTTACTGTAAGTGTGTGGGAGGGAAATAATGTTCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CCA 90 bp | TTACATGTAAACAAAACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGCAGAGATATAGCTGCTaGGACACTCTTCCACGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LHVNKTIIKDQGVREGRGQRYSC*DTLPRS Trigger: TGATCGTGGAAGAGTGTCCCAGCAGCTATATCTCTG...CCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGTTTTGTTTACATGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CCA 90 bp | GAGGACAATGTGCGACAGCTACCCTTGACATTAAGGCTGCTTCTAATTCAGCCGGTCTGTTTCAATTGTTaGGTCAGCTCCATTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EDNVRQLPLTLRLLLIQPVCFNC*VSSIFQ Trigger: TTGGAAAATGGAGCTGACCCAACAATTGAAACAGAC...CGGCTGAATTAGAAGCAGCCTTAATGTCAAGGGTAGCTGTCGCACATTGTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
||
| CDS-3UTR TCA 90 bp | ACCATCACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACACACTGGGCTGCCAACTGGTaGGCAGACAGAGAATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TITLYFLIPQEHYFPPTHWAANW*ADREFA Trigger: AGCAAATTCTCTGTCTGCTCACCAGTTGGCAGCCCA...GTGTGTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTGATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAATCTACCACAGCTATTTaGCCATGTGCCGCAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVKLCYLIQRLTTTCTIKSTTAI*PCAAAH Trigger: GTGGGCTGCGGCACATGGGCAAATAGCTGTGGTAGA...TTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTAAGCCCTGTGCAAAGTCAAAAGAGTGAATACAAGAGTAAAGACAAACAATCTACCACAGCTATTTaGCCATGTGCCGCAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVSPVQSQKSEYKSKDKQSTTAI*PCAAAH Trigger: GTGGGCTGCGGCACATGGGCAAATAGCTGTGGTAGA...TTGTTTGTCTTTACTCTTGTATTCACTCTTTTGACTTTGCACAGGGCTTACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTTTATGCATGAAAGCAATGAAGACGGTTTGGAGCACTGGCATTCCTATCAGAGATATAGCTGCTaGGACACTCTTCCACGATCA | + |
|
Preference number: 4 (lower is better) Translates to: QCFMHESNEDGLEHWHSYQRYSC*DTLPRS Trigger: TGATCGTGGAAGAGTGTCCCAGCAGCTATATCTCTG...ATAGGAATGCCAGTGCTCCAAACCGTCTTCATTGCTTTCATGCATAAAACACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123924.8 |
||
| CDS-3UTR CCA 90 bp | CATGTAAACAAAACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGCGTGGAGAAGGAGATGTATaGATATTGCACTCAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HVNKTIIKDQGVREGRGRGEGDV*ILHSAL Trigger: TAAAGCTGAGTGCAATATCCATACATCTCCTTCTCC...ACGCCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGTTTTGTTTACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CCA 90 bp | CATGTAAACAAAACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGCGTGTCTGTTTCAATTGTTaGGTCAGCTCCATTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HVNKTIIKDQGVREGRGRVCFNC*VSSIFQ Trigger: TTGGAAAATGGAGCTGACCCAACAATTGAAACAGAC...ACGCCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGTTTTGTTTACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR TCA 90 bp | GTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGTCACTCCCTGATGTTCTaGAGGAGTTTCAGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VKLCYLIQRLTTTCTIKGHSLMF*RSFSRW Trigger: CCATCTGCTGAAACTCCTTCAGAACATCAGGGAGTG...ACCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000226100.2 |
||
| CDS-3UTR GCA 90 bp | TTACATGTAAACAAAACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGACCTCGTTTCCCCTGTaGTTGTTGGTTAAAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LHVNKTIIKDQGVREGRGTSFPL*LLVKVV Trigger: AACTACTTTAACCAACAAGCACAGGGGAAACGAGGT...CCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGTTTTGTTTACATGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGCAAAGTCAAAAGAGTGAATACAAGAGTAAAGACAAACAAGTTGGAGTTTTCTACCACAGCTATTTaGCCATGTGCCGCAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCKVKRVNTRVKTNKLEFSTTAI*PCAAAH Trigger: GTGGGCTGCGGCACATGGGCAAATAGCTGTGGTAGA...AAACTCCAACTTGTTTGTCTTTACTCTTGTATTCACTCTTTTGACTTTGCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR GCA 90 bp | TGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGTGTCTGTGTAGCCCTTaGTACAGGCAAGAGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CQIVLLDTKTHNHLYHKRCLCSP*YRQETE Trigger: CTCTGTCTCTTGCCTGTAGCAAGGGCTACACAGACA...CCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTAGCAGGGTTAAAGAGCAGCTCGCTTCTCTTTTACGACTTTCCTTCTCAGGAGAAGGAGATGTATaGATATTGCACTCAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SSSRVKEQLASLLRLSFSGEGDV*ILHSAL Trigger: TAAAGCTGAGTGCAATATCCATACATCTCCTTCTCC...TGAGAAGGAAAGTCGTAAAAGAGAAGCGAGCTGCTCTTTAACCCTGCTAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| CDS-3UTR CCA 90 bp | TCCTCTAGCAGGGTTAAAGAGCAGCTCGCTTCTCTTTTACGACTTTCCTTCTCAGTCTGTTTCAATTGTTaGGTCAGCTCCATTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSRVKEQLASLLRLSFSVCFNC*VSSIFQ Trigger: TTGGAAAATGGAGCTGACCCAACAATTGAAACAGAC...TGAGAAGGAAAGTCGTAAAAGAGAAGCGAGCTGCTCTTTAACCCTGCTAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| CDS-3UTR TCA 90 bp | CTGTGCAAAGTCAAAAGAGTGAATACAAGAGTAAAGACAAACAAGTTGGAGTTTTGGGCTGCCAACTGGTaGGCAGACAGAGAATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCKVKRVNTRVKTNKLEFWAANW*ADREFA Trigger: AGCAAATTCTCTGTCTGCTCACCAGTTGGCAGCCCA...AAACTCCAACTTGTTTGTCTTTACTCTTGTATTCACTCTTTTGACTTTGCACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR TCA 90 bp | AACTATCTGAGTTTATGGAAAAGTACAATAAGTGAACTCCGCCCTTCGCTTTACGGATCTGCACCATTCTaGAGAAGGAACTCTACCACA | + |
|
Preference number: 4 (lower is better) Translates to: NYLSLWKSTISELRPSLYGSAPF*RRNSTT Trigger: TGTGGTAGAGTTCCTTCTTCAGAATGGTGCAGATCC...GTAAAGCGAAGGGCGGAGTTCACTTATTGTACTTTTCCATAAACTCAGATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
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| CDS-3UTR TCA 90 bp | TTAAAGTGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATCACTCCCTGATGTTCTaGAGGAGTTTCAGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LKCQIVLLDTKTHNHLYHHSLMF*RSFSRW Trigger: CCATCTGCTGAAACTCCTTCAGAACATCAGGGAGTG...ATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACACTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000226100.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGAACATTATTTCCCTCCCACACACTTACAGTAAGCCCTGTGCAAAGTCAAACCTCGTTTCCCCTGTaGTTGTTGGTTAAAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRTLFPSHTLTVSPVQSQTSFPL*LLVKVV Trigger: AACTACTTTAACCAACAAGCACAGGGGAAACGAGGT...TTGACTTTGCACAGGGCTTACTGTAAGTGTGTGGGAGGGAAATAATGTTCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR GCA 90 bp | TTTAGTAAGAGGCAAGTTAATGACATTCCTCTAGCAGGGTTAAAGAGCAGCTCGACCTCGTTTCCCCTGTaGTTGTTGGTTAAAGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSKRQVNDIPLAGLKSSSTSFPL*LLVKVV Trigger: AACTACTTTAACCAACAAGCACAGGGGAAACGAGGT...CGAGCTGCTCTTTAACCCTGCTAGAGGAATGTCATTAACTTGCCTCTTACTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
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| CDS-3UTR CCA 90 bp | TTCCACAAGAACATTATTTCCCTCCCACACACTTACAGTAAGCCCTGTGCAAAGGTCTGTTTCAATTGTTaGGTCAGCTCCATTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FHKNIISLPHTYSKPCAKVCFNC*VSSIFQ Trigger: TTGGAAAATGGAGCTGACCCAACAATTGAAACAGAC...CTTTGCACAGGGCTTACTGTAAGTGTGTGGGAGGGAAATAATGTTCTTGTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
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| CDS-3UTR TCA 90 bp | GTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGTATCGGTTTGGCAATATaGATTTCATCCCCATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VKLCYLIQRLTTTCTIKGIGLAI*ISSPWR Trigger: TCGCCATGGGGATGAAATTCATATTGCCAAACCGAT...ACCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR TCA 90 bp | GTAAACCATCACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACGGATCTGCACCATTCTaGAGAAGGAACTCTACCACA | + |
|
Preference number: 4 (lower is better) Translates to: VNHHTVLFNSTRTLFPSHGSAPF*RRNSTT Trigger: TGTGGTAGAGTTCCTTCTTCAGAATGGTGCAGATCC...GTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTGATGGTTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR TCA 90 bp | CACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACACACTTACAGGATCTGCACCATTCTaGAGAAGGAACTCTACCACA | + |
|
Preference number: 4 (lower is better) Translates to: HTVLFNSTRTLFPSHTLTGSAPF*RRNSTT Trigger: TGTGGTAGAGTTCCTTCTTCAGAATGGTGCAGATCC...TGTAAGTGTGTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
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| CDS-3UTR TCA 90 bp | ACCATCACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACACACAGTCAAGCAGCATTTTaGCAATGTCTGTGTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TITLYFLIPQEHYFPPTHSQAAF*QCLCSP Trigger: AGGGCTACACAGACATTGTCAAAATGCTGCTTGACT...GTGTGTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTGATGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR TCA 90 bp | AACGGCCATTTTTCAGATGAATTTACCTCAGTCAACCCTCACAGTTCTTCAATTAGTCAAGCAGCATTTTaGCAATGTCTGTGTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NGHFSDEFTSVNPHSSSISQAAF*QCLCSP Trigger: AGGGCTACACAGACATTGTCAAAATGCTGCTTGACT...AATTGAAGAACTGTGAGGGTTGACTGAGGTAAATTCATCTGAAAAATGGCCGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| CDS-3UTR TCA 90 bp | TGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGAGTCAAGCAGCATTTTaGCAATGTCTGTGTAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CQIVLLDTKTHNHLYHKRSQAAF*QCLCSP Trigger: AGGGCTACACAGACATTGTCAAAATGCTGCTTGACT...CCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR TCA 90 bp | GCCCTGTGCAAAGTCAAAAGAGTGAATACAAGAGTAAAGACAAACAAGTTGGAGTCCAGTCATATTCATTaGCGTCAACTCCACAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALCKVKRVNTRVKTNKLESSHIH*RQLHSQ Trigger: TTGACTGTGGAGTTGACGTCAATGAATATGACTGGA...CTCCAACTTGTTTGTCTTTACTCTTGTATTCACTCTTTTGACTTTGCACAGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGAACATTATTTCCCTCCCACACACTTACAGTAAGCCCTGTGCAAAGTCAAGTCTGTTTCAATTGTTaGGTCAGCTCCATTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TRTLFPSHTLTVSPVQSQVCFNC*VSSIFQ Trigger: TTGGAAAATGGAGCTGACCCAACAATTGAAACAGAC...TTGACTTTGCACAGGGCTTACTGTAAGTGTGTGGGAGGGAAATAATGTTCTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCTGGAGTTAGAATACTACAGTGTTTTATGCATGAAAGCAATGAAGACGGTATCGGTTTGGCAATATaGATTTCATCCCCATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MSGVRILQCFMHESNEDGIGLAI*ISSPWR Trigger: TCGCCATGGGGATGAAATTCATATTGCCAAACCGAT...ACCGTCTTCATTGCTTTCATGCATAAAACACTGTAGTATTCTAACTCCAGACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123924.8 |
||
| CDS-3UTR TCA 90 bp | TCTTCCAGTAACTATCTGAGTTTATGGAAAAGTACAATAAGTGAACTCCGCCCTTCCAGTCATATTCATTaGCGTCAACTCCACAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSNYLSLWKSTISELRPSSHIH*RQLHSQ Trigger: TTGACTGTGGAGTTGACGTCAATGAATATGACTGGA...AGGGCGGAGTTCACTTATTGTACTTTTCCATAAACTCAGATAGTTACTGGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
||
| CDS-3UTR CCA 90 bp | GTTAATGACATTCCTCTAGCAGGGTTAAAGAGCAGCTCGCTTCTCTTTTACGACCATATCAAATCGGTTTaGCAATATGAATTTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: VNDIPLAGLKSSSLLFYDHIKSV*QYEFHP Trigger: GGGATGAAATTCATATTGCCAAACCGATTTGATATG...GTCGTAAAAGAGAAGCGAGCTGCTCTTTAACCCTGCTAGAGGAATGTCATTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| 3UTR CAA 72 bp | ATTGTGCTGTGCTTAAATATGCCTAAAATAAACTACTaGGGGTCAGACTCTCGAAGTTTGAACCAACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVLCLNMPKINY*GSDSRSLNQHW Trigger: CCAGTGTTGGTTCAAACTTCGAGAGTCTGACCCCAAGTAGTTTATTTTAGGCATATTTAAGCACAGCACAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| CDS-3UTR TCA 90 bp | TTAAAGTGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATTCCAGTCATATTCATTaGCGTCAACTCCACAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKCQIVLLDTKTHNHLYHSSHIH*RQLHSQ Trigger: TTGACTGTGGAGTTGACGTCAATGAATATGACTGGA...ATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACACTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR TCA 90 bp | CACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACACACTTACATCCAGTCATATTCATTaGCGTCAACTCCACAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTVLFNSTRTLFPSHTLTSSHIH*RQLHSQ Trigger: TTGACTGTGGAGTTGACGTCAATGAATATGACTGGA...TGTAAGTGTGTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CCA 90 bp | AACTATCTGAGTTTATGGAAAAGTACAATAAGTGAACTCCGCCCTTCGCTTTACGGAGAAGGAGATGTATaGATATTGCACTCAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NYLSLWKSTISELRPSLYGEGDV*ILHSAL Trigger: TAAAGCTGAGTGCAATATCCATACATCTCCTTCTCC...GTAAAGCGAAGGGCGGAGTTCACTTATTGTACTTTTCCATAAACTCAGATAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123924.8 |
||
| CDS-3UTR CCA 90 bp | GTAAACCATCACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACCATATCAAATCGGTTTaGCAATATGAATTTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: VNHHTVLFNSTRTLFPSHHIKSV*QYEFHP Trigger: GGGATGAAATTCATATTGCCAAACCGATTTGATATG...GTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTGATGGTTTAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCAAAGTCAAAAGAGTGAATACAAGAGTAAAGACAAACAAGTTGGAGTTTCATATCAAATCGGTTTaGCAATATGAATTTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCKVKRVNTRVKTNKLEFHIKSV*QYEFHP Trigger: GGGATGAAATTCATATTGCCAAACCGATTTGATATG...AAACTCCAACTTGTTTGTCTTTACTCTTGTATTCACTCTTTTGACTTTGCACAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CAA 90 bp | TGGGACCCCAACCCCACTCCTGCAAGAGCAGCCGCGCTCAAGCACCAGGGCACCTTCCAGTCATATTCATaGACGTCAACTCCACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WDPNPTPARAAALKHQGTFQSYS*TSTPQS Trigger: TGACTGTGGAGTTGACGTCAATGAATATGACTGGAA...GGTGCCCTGGTGCTTGAGCGCGGCTGCTCTTGCAGGAGTGGGGTTGGGGTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| CDS-3UTR CAA 90 bp | GGACCCCAACCCCACTCCTGCAAGAGCAGCCGCGCTCAAGCACCAGGGCACCTTAGTCTGTTTCAATTGTaGGGTCAGCTCCATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPQPHSCKSSRAQAPGHLSLFQL*GQLHFP Trigger: TGGAAAATGGAGCTGACCCAACAATTGAAACAGACT...AAGGTGCCCTGGTGCTTGAGCGCGGCTGCTCTTGCAGGAGTGGGGTTGGGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| CDS-3UTR CAA 90 bp | CTCCCTGATGTTCTGAAGGAGTTTCAGCAGATGGGACTCGATGGCCTGTTGGACCTCTACCACAGCTATTaGCCCATGTGCCGCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPDVLKEFQQMGLDGLLDLYHSY*PMCRSP Trigger: TGGGCTGCGGCACATGGGCAAATAGCTGTGGTAGAG...GTCCAACAGGCCATCGAGTCCCATCTGCTGAAACTCCTTCAGAACATCAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
||
| CDS TCA 90 bp | GGGCTGCTCCTTCATCTGGGTTTGGGTCTAGCTGGTGCTCTAGCTTaGTGTCTGGCATCCCAGAGATATAGCTGCTGGGACACTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLLLHLGLGLAGALA*CLASQRYSCWDTLP Trigger: TGGAAGAGTGTCCCAGCAGCTATATCTCTGGGATGCCAGACATCAAGCTAGAGCACCAGCTAGACCCAAACCCAGATGAAGGAGCAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS CCA 90 bp | TCAAATCGGTTTGGCAATATGAATTTCATCCCCATGGCGACGCCCTaGGCTGCTCCTTCATCTGGGTTTGGGTCTAGCTGGTGCTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNRFGNMNFIPMATP*AAPSSGFGSSWCSS Trigger: GCTAGAGCACCAGCTAGACCCAAACCCAGATGAAGGAGCAGCCCAGGGCGTCGCCATGGGGATGAAATTCATATTGCCAAACCGATTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS-3UTR CAA 90 bp | ACCCTGCAGTGTGTGGTCCTGTCAGACAAAACCCACTTGCATAGAGCAGCATTACTCCTTCATCTGGGTTaGGGTCTAGCTGGTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TLQCVVLSDKTHLHRAALLLHLG*GLAGAL Trigger: TAGAGCACCAGCTAGACCCAAACCCAGATGAAGGAG...TAATGCTGCTCTATGCAAGTGGGTTTTGTCTGACAGGACCACACACTGCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| CDS-3UTR CAA 90 bp | ACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGCGTTTCCCGAGTCTCTCGTTTCCCCTGTGCTaGTTGGTTAAAGTAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TIIKDQGVREGRGRFPSLSFPLC*LVKVVD Trigger: GTCAACTACTTTAACCAACAAGCACAGGGGAAACGA...GAGACTCGGGAAACGCCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CAA 90 bp | TCCTCTAGCAGGGTTAAAGAGCAGCTCGCTTCTCTTTTACGACTTTCCTTCTCACTCTACCACAGCTATTaGCCCATGTGCCGCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSRVKEQLASLLRLSFSLYHSY*PMCRSP Trigger: TGGGCTGCGGCACATGGGCAAATAGCTGTGGTAGAG...TGAGAAGGAAAGTCGTAAAAGAGAAGCGAGCTGCTCTTTAACCCTGCTAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| CDS-3UTR CAA 90 bp | TTACATGTAAACAAAACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGCTCTACCACAGCTATTaGCCCATGTGCCGCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LHVNKTIIKDQGVREGRGLYHSY*PMCRSP Trigger: TGGGCTGCGGCACATGGGCAAATAGCTGTGGTAGAG...CCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGTTTTGTTTACATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CAA 90 bp | ACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGCGTTTCCCGAGTCTCAGTCTGTTTCAATTGTaGGGTCAGCTCCATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TIIKDQGVREGRGRFPSLSLFQL*GQLHFP Trigger: TGGAAAATGGAGCTGACCCAACAATTGAAACAGACT...GAGACTCGGGAAACGCCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS TCA 90 bp | TCACGAATCGAGAACACACGTTCATATCAAATCGGTTTGGCAATATaGATTTCATCCCCATGGCGACGCCCTGGGCTGCTCCTTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRIENTRSYQIGLAI*ISSPWRRPGLLLHL Trigger: CAGATGAAGGAGCAGCCCAGGGCGTCGCCATGGGGATGAAATTCATATTGCCAAACCGATTTGATATGAACGTGTGTTCTCGATTCGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS-3UTR CAA 90 bp | TTCCACAAGAACATTATTTCCCTCCCACACACTTACAGTAAGCCCTGTGCAAAGCTCCTTCATCTGGGTTaGGGTCTAGCTGGTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: FHKNIISLPHTYSKPCAKLLHLG*GLAGAL Trigger: TAGAGCACCAGCTAGACCCAAACCCAGATGAAGGAG...CTTTGCACAGGGCTTACTGTAAGTGTGTGGGAGGGAAATAATGTTCTTGTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCCCGAGTCTCCTCACTCCCTGATGTTCTGAAGGAGTTTCAGCAGATGGGATTCCAGTCATATTCATaGACGTCAACTCCACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSRVSSLPDVLKEFQQMGFQSYS*TSTPQS Trigger: TGACTGTGGAGTTGACGTCAATGAATATGACTGGAA...TCCCATCTGCTGAAACTCCTTCAGAACATCAGGGAGTGAGGAGACTCGGGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091356.11 ENSMUST00000123924.8 |
||
| CDS-3UTR CAA 90 bp | TGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGCTCTACCACAGCTATTaGCCCATGTGCCGCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CQIVLLDTKTHNHLYHKRLYHSY*PMCRSP Trigger: TGGGCTGCGGCACATGGGCAAATAGCTGTGGTAGAG...CCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CAA 90 bp | TCAACCCTCACAGTTCTTCAATTCCTCTCTAGTCCATGGTTCCCTCTTCTGGATGTAGACATGCCTTACTaGAATTCCAGGAGAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: STLTVLQFLSSPWFPLLDVDMPY*NSRRRR Trigger: TCTCCTTCTCCTGGAATTCAAGTAAGGCATGTCTAC...ATCCAGAAGAGGGAACCATGGACTAGAGAGGAATTGAAGAACTGTGAGGGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| CDS-3UTR CAA 90 bp | AGTGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAACTCTACCACAGCTATTaGCCCATGTGCCGCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVKLCYLIQRLTTTCTIKLYHSY*PMCRSP Trigger: TGGGCTGCGGCACATGGGCAAATAGCTGTGGTAGAG...TTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CAA 90 bp | CATGTAAACAAAACTATCATTAAGGACCAAGGAGTGAGGGAGGGCAGAGGGCGTAGTCTGTTTCAATTGTaGGGTCAGCTCCATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HVNKTIIKDQGVREGRGRSLFQL*GQLHFP Trigger: TGGAAAATGGAGCTGACCCAACAATTGAAACAGACT...ACGCCCTCTGCCCTCCCTCACTCCTTGGTCCTTAATGATAGTTTTGTTTACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CAA 90 bp | GAATACTACAGTGTTTTATGCATGAAAGCAATGAAGACGGTTTGGAGCACTGGCGTAGACATGCCTTACTaGAATTCCAGGAGAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EYYSVLCMKAMKTVWSTGVDMPY*NSRRRR Trigger: TCTCCTTCTCCTGGAATTCAAGTAAGGCATGTCTAC...GCCAGTGCTCCAAACCGTCTTCATTGCTTTCATGCATAAAACACTGTAGTATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123924.8 |
||
| CDS GCA 90 bp | AGAGAATTTGCTAACAGAGGTGTGGTAGAGACCTCGTTTCCCCTGTaGTTGTTGGTTAAAGTAGTTGACTGTTTTATGGGTGAGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: REFANRGVVETSFPL*LLVKVVDCFMGEKC Trigger: ACATTTCTCACCCATAAAACAGTCAACTACTTTAACCAACAAGCACAGGGGAAACGAGGTCTCTACCACACCTCTGTTAGCAAATTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS-3UTR CAA 90 bp | CTGTGCAAAGTCAAAAGAGTGAATACAAGAGTAAAGACAAACAAGTTGGAGTTTCTCCTTCATCTGGGTTaGGGTCTAGCTGGTGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LCKVKRVNTRVKTNKLEFLLHLG*GLAGAL Trigger: TAGAGCACCAGCTAGACCCAAACCCAGATGAAGGAG...AAACTCCAACTTGTTTGTCTTTACTCTTGTATTCACTCTTTTGACTTTGCACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CAA 90 bp | TGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGGTAGACATGCCTTACTaGAATTCCAGGAGAAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CQIVLLDTKTHNHLYHKRVDMPY*NSRRRR Trigger: TCTCCTTCTCCTGGAATTCAAGTAAGGCATGTCTAC...CCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CAA 90 bp | ACCATCACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACACACTTTCCCCTGTGCTTGTaGGTTAAAGTAGTTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TITLYFLIPQEHYFPPTHFPLCL*VKVVDC Trigger: ACAGTCAACTACTTTAACCAACAAGCACAGGGGAAA...GTGTGTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTGATGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CAA 90 bp | AACGGCCATTTTTCAGATGAATTTACCTCAGTCAACCCTCACAGTTCTTCAATTTTTCCCCTGTGCTTGTaGGTTAAAGTAGTTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: NGHFSDEFTSVNPHSSSIFPLCL*VKVVDC Trigger: ACAGTCAACTACTTTAACCAACAAGCACAGGGGAAA...AATTGAAGAACTGTGAGGGTTGACTGAGGTAAATTCATCTGAAAAATGGCCGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| CDS-3UTR CAA 90 bp | TGCTTAAATATGCCTAAAATAAACTACTTGGGGTCAGACTCTCGAAGTTTGAACTCGTTTCCCCTGTGCTaGTTGGTTAAAGTAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CLNMPKINYLGSDSRSLNSFPLC*LVKVVD Trigger: GTCAACTACTTTAACCAACAAGCACAGGGGAAACGA...GTTCAAACTTCGAGAGTCTGACCCCAAGTAGTTTATTTTAGGCATATTTAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150352.3 |
||
| CDS-3UTR CAA 90 bp | ACCATCACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACACACTTCCAGTCATATTCATaGACGTCAACTCCACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TITLYFLIPQEHYFPPTHFQSYS*TSTPQS Trigger: TGACTGTGGAGTTGACGTCAATGAATATGACTGGAA...GTGTGTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTGATGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CAA 90 bp | TGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGTTCCAGTCATATTCATaGACGTCAACTCCACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CQIVLLDTKTHNHLYHKRFQSYS*TSTPQS Trigger: TGACTGTGGAGTTGACGTCAATGAATATGACTGGAA...CCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CAA 90 bp | TGTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGAGTCTGTTTCAATTGTaGGGTCAGCTCCATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CQIVLLDTKTHNHLYHKRSLFQL*GQLHFP Trigger: TGGAAAATGGAGCTGACCCAACAATTGAAACAGACT...CCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAGCCCTGTGCAAAGTCAAAAGAGTGAATACAAGAGTAAAGACAAACAATTTCCCCTGTGCTTGTaGGTTAAAGTAGTTGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TVSPVQSQKSEYKSKDKQFPLCL*VKVVDC Trigger: ACAGTCAACTACTTTAACCAACAAGCACAGGGGAAA...TTGTTTGTCTTTACTCTTGTATTCACTCTTTTGACTTTGCACAGGGCTTACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGCAAAGTCAAAAGAGTGAATACAAGAGTAAAGACAAACAAGTTGGAGTTTTCGTTTCCCCTGTGCTaGTTGGTTAAAGTAGTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LCKVKRVNTRVKTNKLEFSFPLC*LVKVVD Trigger: GTCAACTACTTTAACCAACAAGCACAGGGGAAACGA...AAACTCCAACTTGTTTGTCTTTACTCTTGTATTCACTCTTTTGACTTTGCACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CAA 90 bp | GTAAACCATCACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACTTCCAGTCATATTCATaGACGTCAACTCCACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VNHHTVLFNSTRTLFPSHFQSYS*TSTPQS Trigger: TGACTGTGGAGTTGACGTCAATGAATATGACTGGAA...GTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTGATGGTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CAA 90 bp | GTAAACCATCACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACAGTCTGTTTCAATTGTaGGGTCAGCTCCATTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VNHHTVLFNSTRTLFPSHSLFQL*GQLHFP Trigger: TGGAAAATGGAGCTGACCCAACAATTGAAACAGACT...GTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTGATGGTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022164.16 ENSMUST00000091356.11 ENSMUST00000123924.8 ENSMUST00000226100.2 |
||
| CDS-3UTR CAA 90 bp | GTCAAATTGTGCTACTTGATACAAAGACTCACAACCACCTGTACCATAAAAGGTGGAGATGTATGGATATaGCACTCAGCTTTAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: VKLCYLIQRLTTTCTIKGGDVWI*HSALNK Trigger: CTTATTTAAAGCTGAGTGCAATATCCATACATCTCC...ACCTTTTATGGTACAGGTGGTTGTGAGTCTTTGTATCAAGTAGCACAATTTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS-3UTR CAA 90 bp | CACACTGTACTTTTTAATTCCACAAGAACATTATTTCCCTCCCACACACTTACAGGAGATGTATGGATATaGCACTCAGCTTTAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: HTVLFNSTRTLFPSHTLTGDVWI*HSALNK Trigger: CTTATTTAAAGCTGAGTGCAATATCCATACATCTCC...TGTAAGTGTGTGGGAGGGAAATAATGTTCTTGTGGAATTAAAAAGTACAGTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 |
||
| CDS CCA 72 bp | CCCTGGGCTGCTCCTTCATCTGGGTTTGGGTCTAGCTaGTGCTCTAGCTTGATGTCTGGCATCCCAGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: PWAAPSSGFGSS*CSSLMSGIPEI Trigger: TATCTCTGGGATGCCAGACATCAAGCTAGAGCACCAGCTAGACCCAAACCCAGATGAAGGAGCAGCCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS CCA 72 bp | TTTGGCAATATGAATTTCATCCCCATGGCGACGCCCTaGGCTGCTCCTTCATCTGGGTTTGGGTCTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: FGNMNFIPMATP*AAPSSGFGSSW Trigger: CCAGCTAGACCCAAACCCAGATGAAGGAGCAGCCCAGGGCGTCGCCATGGGGATGAAATTCATATTGCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS TCA 72 bp | GAGAACACACGTTCATATCAAATCGGTTTGGCAATATaGATTTCATCCCCATGGCGACGCCCTGGGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ENTRSYQIGLAI*ISSPWRRPGLL Trigger: GAGCAGCCCAGGGCGTCGCCATGGGGATGAAATTCATATTGCCAAACCGATTTGATATGAACGTGTGTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS CCA 72 bp | CACGAATCGAGAACACACGTTCATATCAAATCGGTTTaGCAATATGAATTTCATCCCCATGGCGACGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HESRTHVHIKSV*QYEFHPHGDAL Trigger: CAGGGCGTCGCCATGGGGATGAAATTCATATTGCCAAACCGATTTGATATGAACGTGTGTTCTCGATTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS GCA 72 bp | GCTAACAGAGGTGTGGTAGAGACCTCGTTTCCCCTGTaGTTGTTGGTTAAAGTAGTTGACTGTTTTATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: ANRGVVETSFPL*LLVKVVDCFMG Trigger: ACCCATAAAACAGTCAACTACTTTAACCAACAAGCACAGGGGAAACGAGGTCTCTACCACACCTCTGTTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS CAA 72 bp | AACAGAGGTGTGGTAGAGACCTCGTTTCCCCTGTGCTaGTTGGTTAAAGTAGTTGACTGTTTTATGGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NRGVVETSFPLC*LVKVVDCFMGE Trigger: CTCACCCATAAAACAGTCAACTACTTTAACCAACAAGCACAGGGGAAACGAGGTCTCTACCACACCTCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS CAA 72 bp | AGAGGTGTGGTAGAGACCTCGTTTCCCCTGTGCTTGTaGGTTAAAGTAGTTGACTGTTTTATGGGTGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RGVVETSFPLCL*VKVVDCFMGEK Trigger: TTTCTCACCCATAAAACAGTCAACTACTTTAACCAACAAGCACAGGGGAAACGAGGTCTCTACCACACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS CAA 90 bp | GAATTTGCTAACAGAGGTGTGGTAGAGACCTCGTTTCCCCTGTGCTaGTTGGTTAAAGTAGTTGACTGTTTTATGGGTGAGAAATGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: EFANRGVVETSFPLC*LVKVVDCFMGEKCF Trigger: AAAACATTTCTCACCCATAAAACAGTCAACTACTTTAACCAACAAGCACAGGGGAAACGAGGTCTCTACCACACCTCTGTTAGCAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||
| CDS CAA 72 bp | ATGTTTTGTTGTAGATGGTGTGTAGACATGCCTTACTaGAATTCCAGGAGAAGGAGATGTATGGATATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: MFCCRWCVDMPY*NSRRRRCMDIA Trigger: TGCAATATCCATACATCTCCTTCTCCTGGAATTCAAGTAAGGCATGTCTACACACCATCTACAACAAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022164.16 ENSMUST00000123924.8 ENSMUST00000150352.3 |
||