Pregenerated sensors for ANKLE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029501Ensembl transcript IDs: ENSMUST00000031474.11, ENSMUST00000086674.10, ENSMUST00000197188.5
Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCATCCCAACTTCTGGCAGTGTTTTGAGCATTGTTACTGAAGTCTaGGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGGT | + |
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Preference number: 1 (lower is better) Translates to: PIPTSGSVLSIVTEV*VRAHLLFCHLLSLG Trigger: ACCGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAACAATGCTCAAAACACTGCCAGAAGTTGGGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR CCA 90 bp | GCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCATTGGAAGAGCAGTCGGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ASDFIMDGCEPPCGC*ELNSGPLEEQSVLL Trigger: TAAGAGCACCGACTGCTCTTCCAATGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR TCA 90 bp | TCTTTTGAGAACAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTaGTTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTACAAGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: SFENKDSLWDCFQVT*LAVLYLELSCLQGE Trigger: TTCCCCTTGTAAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTGTTCTCAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR TCA 90 bp | CCAGTGACTGGAGTTGGATTCCTGAGACCTACATGGTTTGAGAACTaGCTCCCAAAAGTTGTCTTAAGTAAATATCAAGAAAGAAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: PVTGVGFLRPTWFEN*LPKVVLSKYQERRV Trigger: AACTCTTCTTTCTTGATATTTACTTAAGACAACTTTTGGGAGTCAGTTCTCAAACCATGTAGGTCTCAGGAATCCAACTCCAGTCACTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR CAA 90 bp | GGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCATaGGAAGAGCAGTCGGTGCTCTTAACCGCTGAGCCATTTCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GCEPPCGCWELNSGP*EEQSVLLTAEPFLQ Trigger: CTGGAGAAATGGCTCAGCGGTTAAGAGCACCGACTGCTCTTCCAATGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACAGGTGCTCTTAACCGCTaGGCCATTTCTCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SARWFYLGALGCAMPLGTGALNR*AISPAW Trigger: CCAGGCTGGAGAAATGGCTCAGCGGTTAAGAGCACC...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR TCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGCTCTGTGCAAGCAACTaGCAGACAGCTGAGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: KWASKMARVKLNSSDWSWLCASN*QTAETQ Trigger: CTGGGTCTCAGCTGTCTGTCAGTTGCTTGCACAGAG...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR TCA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTGGTGCTCTTAACCGCTaGGCCATTTCTCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLGALNR*AISPAW Trigger: CCAGGCTGGAGAAATGGCTCAGCGGTTAAGAGCACC...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTATTGTTACTGAAGTCTaGGTCAGGGCACATCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PSFSKVVLSWSLRVCNATIVTEV*VRAHLL Trigger: AAGCAGATGTGCCCTGACTCAGACTTCAGTAACAAT...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTTGCAAGCCACTGAAATaGACTCAGATCTCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: PSFSKVVLSWSLRVCNATCKPLK*TQISSA Trigger: AGCACTTGAGATCTGAGTTCATTTCAGTGGCTTGCA...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR GCA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTAGAACCCCCTGCTTCTaGCTAATGAGTGCTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLRTPCF*LMSAGL Trigger: AAGCCCAGCACTCATTAGGCAGAAGCAGGGGGTTCT...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR CAA 90 bp | GATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCATTGGAAGAGCAGTCGGTGCTCTTAACCGCT | + |
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Preference number: 2 (lower is better) Translates to: DFIMDGCEPPCGCWE*NSGPLEEQSVLLTA Trigger: AGCGGTTAAGAGCACCGACTGCTCTTCCAATGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR-3UTR TCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGATTGTTACTGAAGTCTaGGTCAGGGCACATCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: KWASKMARVKLNSSDWSWIVTEV*VRAHLL Trigger: AAGCAGATGTGCCCTGACTCAGACTTCAGTAACAAT...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR TCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTTTGAGCATTGTTACTaGAGTCTGAGTCAGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: KWASKMARVKLNSSDWSWFEHCY*SLSQGT Trigger: TGTGCCCTGACTCAGACTTCAGTAACAATGCTCAAA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR TCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTGCAAGCCACTGAAATaGACTCAGATCTCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: KWASKMARVKLNSSDWSWCKPLK*TQISSA Trigger: AGCACTTGAGATCTGAGTTCATTTCAGTGGCTTGCA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR TCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGCTTCTGGCAGTGTTTTaGGCATTGTTACTGAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: KWASKMARVKLNSSDWSWLLAVF*ALLLKS Trigger: AGACTTCAGTAACAATGCTCAAAACACTGCCAGAAG...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR GCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAACCCCCTGCTTCTaGCTAATGAGTGCTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLRTPCF*LMSAGL Trigger: AAGCCCAGCACTCATTAGGCAGAAGCAGGGGGTTCT...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR GCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTACTTAGAGCTCAGCTaGTTACAAGGGGAACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: KWASKMARVKLNSSDWSWYLELS*LQGEQN Trigger: GTTTTGTTCCCCTTGTAAGCAGCTGAGCTCTAAGTA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: FPLGLFPGHLIGCLVLRAPPCGC*ELNSGP Trigger: TGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGG...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR CCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGAAGGTGGTTTTATCTTaGAGCCTTAGGGTGTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: KWASKMARVKLNSSDWSWKVVLS*SLRVCN Trigger: ATTGCACACCCTAAGGCTCCAAGATAAAACCACCTT...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR GCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGCACCTCACTTGTCTATaGCTTTGCATCTTTGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LLKSESGHICFSATCFLSHLTCL*LCIFVL Trigger: TAGAACAAAGATGCAAAGGCATAGACAAGTGAGGTG...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLPPCGC*ELNSGP Trigger: TGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGG...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR TCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACAATAACTAGGGTGAAATaGCAAACACATAGTTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: SARWFYLGALGCAMPLGTITRVK*QTHSFA Trigger: GGCAAAACTATGTGTTTGTCATTTCACCCTAGTTAT...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR TCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGATAACTAGGGTGAAATaGCAAACACATAGTTTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LLKSESGHICFSATCFLSITRVK*QTHSFA Trigger: GGCAAAACTATGTGTTTGTCATTTCACCCTAGTTAT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAATTGTTACTGAAGTCTaGGTCAGGGCACATCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: KASDFIMDGCEPPCGCWEIVTEV*VRAHLL Trigger: AAGCAGATGTGCCCTGACTCAGACTTCAGTAACAAT...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTTGAGCATTGTTACTaGAGTCTGAGTCAGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: KASDFIMDGCEPPCGCWEFEHCY*SLSQGT Trigger: TGTGCCCTGACTCAGACTTCAGTAACAATGCTCAAA...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATGCTTTTCTGCCACCTaGTTTCTCTCGGTTGGAATA | + |
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Preference number: 2 (lower is better) Translates to: KASDFIMDGCEPPCGCWECFSAT*FLSVGI Trigger: TATTCCAACCGAGAGAAAGCAGGTGGCAGAAAAGCA...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACTTCTGGCAGTGTTTTaGGCATTGTTACTGAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: KASDFIMDGCEPPCGCWELLAVF*ALLLKS Trigger: AGACTTCAGTAACAATGCTCAAAACACTGCCAGAAG...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR-3UTR GCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACACCTCACTTGTCTATaGCTTTGCATCTTTGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: KASDFIMDGCEPPCGCWEHLTCL*LCIFVL Trigger: TAGAACAAAGATGCAAAGGCATAGACAAGTGAGGTG...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR-3UTR CCA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTCATCAGATTTTATTATaGATGGTTGTGAGCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLHQILL*MVVSHH Trigger: ATGGTGGCTCACAACCATCCATAATAAAATCTGATG...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR GCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTCACCTCACTTGTCTATaGCTTTGCATCTTTGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLHLTCL*LCIFVL Trigger: TAGAACAAAGATGCAAAGGCATAGACAAGTGAGGTG...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR TCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTTATGTGATCTCAAAATaGCTCACAAAAGGCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLYVISK*LTKGTE Trigger: TTCAGTGCCTTTTGTGAGTCATTTTGAGATCACATA...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR GCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCTGCTTTTCTGCCACCTaGTTTCTCTCGGTTGGAATA | + |
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Preference number: 2 (lower is better) Translates to: LVLVIAGEFSMMITRMILCFSAT*FLSVGI Trigger: TATTCCAACCGAGAGAAAGCAGGTGGCAGAAAAGCA...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR CAA 90 bp | ACAAACCCAATTAGCAACACCTCACTTGTCTATGCCTTTGCATCTTaGTTCTATTTCAAAATTAGAAGTTTCCACCTGAAAAGTCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: TNPISNTSLVYAFAS*FYFKIRSFHLKSLN Trigger: ATTCAGACTTTTCAGGTGGAAACTTCTAATTTTGAAATAGAACAAAGATGCAAAGGCATAGACAAGTGAGGTGTTGCTAATTGGGTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR TCA 72 bp | GTGTCTCCAGAACACTACTGGCTCTGTGCAAGCAACTaGCAGACAGCTGAGACCCAGCTTCAGCAAGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: VSPEHYWLCASN*QTAETQLQQGG Trigger: ACCACCTTGCTGAAGCTGGGTCTCAGCTGTCTGTCAGTTGCTTGCACAGAGCCAGTAGTGTTCTGGAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR TCA 72 bp | TGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTaGACTCAGGACCATTGGAAGAGCAGTCGGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: WMVVSHHVVAGN*TQDHWKSSRCS Trigger: AGAGCACCGACTGCTCTTCCAATGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| 3UTR CCA 72 bp | CAGCTGAGACCCAGCTTCAGCAAGGTGGTTTTATCTTaGAGCCTTAGGGTGTGCAATGCCACTCGGTACACA | + |
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Preference number: 3 (lower is better) Translates to: QLRPSFSKVVLS*SLRVCNATRYT Trigger: TGTGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGGTCTCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR CAA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTTGAACTCAGGACCATaGGAAGAGCAGTCGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: KWASKMARVKLNSSDWSWLNSGP*EEQSVL Trigger: GAGCACCGACTGCTCTTCCAATGGTCCTGAGTTCAA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR TCA 72 bp | ACACTACTGGCTCTGTGCAAGCAACTGACAGACAGCTaGGACCCAGCTTCAGCAAGGTGGTTTTATCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: TLLALCKQLTDS*DPASARWFYLG Trigger: TCCAAGATAAAACCACCTTGCTGAAGCTGGGTCTCAGCTGTCTGTCAGTTGCTTGCACAGAGCCAGTAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR GCA 72 bp | TTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTaGAATGCCACTCGGTACACATCTCTTGGGATAGCC | + |
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Preference number: 3 (lower is better) Translates to: FSKVVLSWSLRV*NATRYTSLGIA Trigger: GGCTATCCCAAGAGATGTGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR CAA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCACATAGTTTTGCCATaGCATATCAAAAAGCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: PSFSKVVLSWSLRVCNATHIVLP*HIKKLH Trigger: GTGCAGCTTTTTGATATGCAATGGCAAAACTATGTG...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR CAA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTTTGAACTCAGGACCATaGGAAGAGCAGTCGGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLLNSGP*EEQSVL Trigger: GAGCACCGACTGCTCTTCCAATGGTCCTGAGTTCAA...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR-3UTR CAA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGAGATTCCCTTTGGGATaGTTTCCAGGTCACTTGATT | + |
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Preference number: 3 (lower is better) Translates to: KWASKMARVKLNSSDWSWRFPLG*FPGHLI Trigger: AATCAAGTGACCTGGAAACAATCCCAAAGGGAATCT...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
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| 3UTR TCA 72 bp | ACTTCTGGCAGTGTTTTGAGCATTGTTACTGAAGTCTaGGTCAGGGCACATCTGCTTTTCTGCCACCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TSGSVLSIVTEV*VRAHLLFCHLL Trigger: AAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAACAATGCTCAAAACACTGCCAGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| 3UTR TCA 72 bp | CATCCCAACTTCTGGCAGTGTTTTGAGCATTGTTACTaGAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HPNFWQCFEHCY*SLSQGTSAFLP Trigger: TGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAACAATGCTCAAAACACTGCCAGAAGTTGGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| 3UTR CCA 72 bp | TTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCATTGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: FIMDGCEPPCGC*ELNSGPLEEQS Trigger: CGACTGCTCTTCCAATGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| 3UTR-3UTR CAA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGCACATAGTTTTGCCATaGCATATCAAAAAGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLKSESGHICFSATCFLSHIVLP*HIKKLH Trigger: GTGCAGCTTTTTGATATGCAATGGCAAAACTATGTG...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| 3UTR-3UTR CAA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTTTAGCAACACCTCACTaGTCTATGCCTTTGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLLATPH*SMPLHL Trigger: AAGATGCAAAGGCATAGACAAGTGAGGTGTTGCTAA...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| 3UTR TCA 72 bp | CCAAAAGAAGGCATCAGATTTTATTATGGATGGTTGTaGGCCACCATGTGGTTGCTGGGAATTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PKEGIRFYYGWL*ATMWLLGIELR Trigger: CCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTTCTTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| 3UTR CCA 72 bp | ACTGAAATTGGCAAAATCAGTGGTATAGTTCTGTACTaGGGTGAAGCACTGCAAGTGTCTCCAGAACACTAC | + |
|
Preference number: 3 (lower is better) Translates to: TEIGKISGIVLY*GEALQVSPEHY Trigger: GTAGTGTTCTGGAGACACTTGCAGTGCTTCACCCCAGTACAGAACTATACCACTGATTTTGCCAATTTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTACTTCTGGCAGTGTTTaGAGCATTGTTACTGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FPLGLFPGHLIGCLVLRATSGSV*SIVTEV Trigger: GACTTCAGTAACAATGCTCAAAACACTGCCAGAAGT...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| 3UTR TCA 72 bp | AACAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTaGTTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: NKDSLWDCFQVT*LAVLYLELSCL Trigger: TAAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| 3UTR TCA 72 bp | GGAGTTGGATTCCTGAGACCTACATGGTTTGAGAACTaGCTCCCAAAAGTTGTCTTAAGTAAATATCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GVGFLRPTWFEN*LPKVVLSKYQE Trigger: TTCTTGATATTTACTTAAGACAACTTTTGGGAGTCAGTTCTCAAACCATGTAGGTCTCAGGAATCCAACTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCTTAGCAACACCTCACTaGTCTATGCCTTTGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVLVIAGEFSMMITRMILLATPH*SMPLHL Trigger: AAGATGCAAAGGCATAGACAAGTGAGGTGTTGCTAA...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| 3UTR TCA 72 bp | ACCTGCTTTCTCTCGGTTGGAATAACTAGGGTGAAATaGCAAACACATAGTTTTGCCATTGCATATCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TCFLSVGITRVK*QTHSFAIAYQK Trigger: TTTTTGATATGCAATGGCAAAACTATGTGTTTGTCATTTCACCCTAGTTATTCCAACCGAGAGAAAGCAGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| 3UTR TCA 72 bp | CCAGCCTGGGTACAACTTCTAGACAACTTACTACACTaGCAAGTACTGAGAAATAGTTTTGGTTTTAGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PAWVQLLDNLLH*QVLRNSFGFSY Trigger: ATAACTAAAACCAAAACTATTTCTCAGTACTTGTCAGTGTAGTAAGTTGTCTAGAAGTTGTACCCAGGCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGGCCAGCGCACGGCGATaGACAGCACCGAGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSASARR*TAPRRP Trigger: TGGGCGCCTCGGTGCTGTTCATCGCCGTGCGCTGGC...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTGCCAGCGCACGGCGATaGACAGCACCGAGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPLGLFPGHLIGCLVLRAASARR*TAPRRP Trigger: TGGGCGCCTCGGTGCTGTTCATCGCCGTGCGCTGGC...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR GCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACACACTTCACCTGGCTGTaGGGCCACCGCTTCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: SARWFYLGALGCAMPLGTHFTWL*GHRFRR Trigger: GCGTCTGAAGCGGTGGCCGCACAGCCAGGTGAAGTG...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| 3UTR CAA 72 bp | CCACCATGTGGTTGCTGGGAATTGAACTCAGGACCATaGGAAGAGCAGTCGGTGCTCTTAACCGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWELNSGP*EEQSVLLTAEP Trigger: TGGCTCAGCGGTTAAGAGCACCGACTGCTCTTCCAATGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACACAGGCTTACTGGGGCTaGTACCAGCTGGACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SARWFYLGALGCAMPLGTQAYWG*YQLDCI Trigger: GATGCAGTCCAGCTGGTAGCAGCCCCAGTAAGCCTG...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGCCTCCTCCCCATTGGTaGCCTCTAGTCCCCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSPPPHW*PLVPFH Trigger: ATGGAAGGGGACTAGAGGCCACCAATGGGGAGGAGG...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| 3UTR CAA 72 bp | ATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATaGAACTCAGGACCATTGGAAGAGCAGTCGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MDGCEPPCGCWE*NSGPLEEQSVL Trigger: GAGCACCGACTGCTCTTCCAATGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAACCATCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACAGGATACCCCAGCTCATaGGCTAGCTCCCTTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SARWFYLGALGCAMPLGTGYPSS*ASSLPT Trigger: AGTTGGAAGGGAGCTAGCTCATGAGCTGGGGTATCC...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR GCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACACTTCACCTGGCTGTaGGGCCACCGCTTCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEHFTWL*GHRFRR Trigger: GCGTCTGAAGCGGTGGCCGCACAGCCAGGTGAAGTG...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTGGGTGGACACTGGATaGTACCGCTTCCTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KWASKMARVKLNSSDWSWWVDTG*YRFLFW Trigger: CCAGAAGAGGAAGCGGTAGCATCCAGTGTCCACCCA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACACTGAAGGGTACTGGGTaGACACTGGATGCTACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SARWFYLGALGCAMPLGTLKGTG*TLDATA Trigger: AGCGGTAGCATCCAGTGTCCACCCAGTACCCTTCAG...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGCTGAAGGGTACTGGGTaGACACTGGATGCTACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSLKGTG*TLDATA Trigger: AGCGGTAGCATCCAGTGTCCACCCAGTACCCTTCAG...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGGGCCTCCTCCCCATTaGTGGCCTCTAGTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEGPPPH*WPLVPF Trigger: GAAGGGGACTAGAGGCCACCAATGGGGAGGAGGCCC...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTTCAGCTTTCTGGTCTaGGGACCACAGCTCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSFSFLV*GPQLPN Trigger: ATTGGGGAGCTGTGGTCCTCAGACCAGAAAGCTGAA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACATTCAGCCATTGCCTCTaGCACCTCAGTGTTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SARWFYLGALGCAMPLGTFSHCL*HLSVGP Trigger: AGGACCAACACTGAGGTGTCAGAGGCAATGGCTGAA...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTTCAGCCATTGCCTCTaGCACCTCAGTGTTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSFSHCL*HLSVGP Trigger: AGGACCAACACTGAGGTGTCAGAGGCAATGGCTGAA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTGCTGTGGAAGAAGCCTaGTTTCTTTCGAGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSFSKVVLSWSLRVCNATAVEEA*FLSRWS Trigger: ACTCCACCTCGAAAGAAAGCAGGCTTCTTCCACAGC...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCCACGGAGATGGAGTTaGTGTACTTCTTTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSFSKVVLSWSLRVCNATPRRWS*CTSFHC Trigger: GCAGTGGAAAGAAGTACAGCAACTCCATCTCCGTGG...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR GCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTATGGCAGGAGGAGATaGCAGCAAGTCACTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSYGRRR*QQVTVC Trigger: GCAGACAGTGACTTGCTGGCATCTCCTCCTGCCATA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTGTCACTCCAGCCTTGTaGTTGTCATTCCTGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSFSKVVLSWSLRVCNATVTPAL*LSFLVE Trigger: CTCTACCAGGAATGACAACCACAAGGCTGGAGTGAC...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTTGGCACATGGAAGCCTaGTTCTCTTTGGCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: PSFSKVVLSWSLRVCNATWHMEA*FSLAAT Trigger: TGTTGCTGCCAAAGAGAACCAGGCTTCCATGTGCCA...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTATGTCAGCTGGCACATaGAAGCCTGGTTCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSFSKVVLSWSLRVCNATMSAGT*KPGSLW Trigger: CCAAAGAGAACCAGGCTTCCATGTGCCAGCTGACAT...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTGTCTCTAATGTCAGCTaGCACATGGAAGCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSFSKVVLSWSLRVCNATVSNVS*HMEAWF Trigger: GAACCAGGCTTCCATGTGCCAGCTGACATTAGAGAC...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGAACAGAAACAGGTGGTaGAAGGGCCTCCTCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSNRNRW*KGLLPI Trigger: AATGGGGAGGAGGCCCTTCCACCACCTGTTTCTGTT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTTCCAAGGCTTGCTATaGCAGGAGGAGATGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KWASKMARVKLNSSDWSWFQGLL*QEEMPA Trigger: TGCTGGCATCTCCTCCTGCCATAGCAAGCCTTGGAA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACAACAGGAAGAGCCTCTTaGTGGAATCTACCGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SARWFYLGALGCAMPLGTTGRAS*WNLPWQ Trigger: CTGCCACGGTAGATTCCACCAAGAGGCTCTTCCTGT...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGACAGGAAGAGCCTCTTaGTGGAATCTACCGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSTGRAS*WNLPWQ Trigger: CTGCCACGGTAGATTCCACCAAGAGGCTCTTCCTGT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTCCACTGCCAAAATCTaGGGTTCTGTCCTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KWASKMARVKLNSSDWSWSTAKI*GSVLKA Trigger: TGCCTTCAGGACAGAACCTCAGATTTTGGCAGTGGA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGAGGGCGAGTAGCACATaGCAGTGCTTTTCCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSRASST*QCFSIC Trigger: ACAGATGGAAAAGCACTGTCATGTGCTACTCGCCCT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGGCTGTGGAAGAAGCCTaGTTTCTTTCGAGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KWASKMARVKLNSSDWSWAVEEA*FLSRWS Trigger: ACTCCACCTCGAAAGAAAGCAGGCTTCTTCCACAGC...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR GCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGCCACGGAGATGGAGTTaGTGTACTTCTTTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSPRRWS*CTSFHC Trigger: GCAGTGGAAAGAAGTACAGCAACTCCATCTCCGTGG...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGCTTCTTTCCAAGGCTTaGTATGGCAGGAGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSLLSKA*YGRRRC Trigger: GCATCTCCTCCTGCCATAGCAAGCCTTGGAAAGAAG...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTGGCACTGAAGGGTACTaGGTGGACACTGGATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLGTEGY*VDTGCY Trigger: GTAGCATCCAGTGTCCACCCAGTACCCTTCAGTGCC...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTGGCACATGGAAGCCTaGTTCTCTTTGGCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSWHMEA*FSLAAT Trigger: TGTTGCTGCCAAAGAGAACCAGGCTTCCATGTGCCA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGGGGCTGCTTCTACAGTaGGCAGTATTTGAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSGLLLQ*AVFEAS Trigger: TGAAGCCTCAAATACTGCCCACTGTAGAAGCAGCCC...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGACGTGTGCCACTCTTTaGAAGTGTCTCCCATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KWASKMARVKLNSSDWSWTCATL*KCLPCA Trigger: AGCACATGGGAGACACTTCCAAAGAGTGGCACACGT...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGACGTGTGCCACTCTTTaGAAGTGTCTCCCATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSTCATL*KCLPCA Trigger: AGCACATGGGAGACACTTCCAAAGAGTGGCACACGT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGGATACCCCAGCTCATaGGCTAGCTCCCTTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEGYPSS*ASSLPT Trigger: AGTTGGAAGGGAGCTAGCTCATGAGCTGGGGTATCC...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACATCTGAGGTTCTGTCCTaGAGGCAGCCTTCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SARWFYLGALGCAMPLGTSEVLS*RQPSFS Trigger: AGAAAATGAAGGCTGCCTTCAGGACAGAACCTCAGA...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACCAACTCTGTCTGTCTaGGGGCGAGTAGCACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEPTLSV*GRVAHD Trigger: GTCATGTGCTACTCGCCCTCAGACAGACAGAGTTGG...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATGGGTGGACACTGGATaGTACCGCTTCCTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEWVDTG*YRFLFW Trigger: CCAGAAGAGGAAGCGGTAGCATCCAGTGTCCACCCA...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGAGGAGAAGTGTCTTCTaGTCTCAGGAGTGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSRRSVF*SQEWHI Trigger: TATGTGCCACTCCTGAGAGCAGAAGACACTTCTCCT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTCAGGCTTACTGGGGCTaGTACCAGCTGGACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLQAYWG*YQLDCI Trigger: GATGCAGTCCAGCTGGTAGCAGCCCCAGTAAGCCTG...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTCAGTCGAGCCATCATaGCATCCATTGTCACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KWASKMARVKLNSSDWSWSVEPS*HPLSLH Trigger: GTGAAGTGACAATGGATGCCATGATGGCTCGACTGA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGGCACTGAAGGGTACTaGGTGGACACTGGATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEGTEGY*VDTGCY Trigger: GTAGCATCCAGTGTCCACCCAGTACCCTTCAGTGCC...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACATTCTGCTCTCAGGAGTaGCACATAGTAGTGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SARWFYLGALGCAMPLGTFCSQE*HIVVTH Trigger: ATGGGTCACTACTATGTGCCACTCCTGAGAGCAGAA...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTTCTGCTCTCAGGAGTaGCACATAGTAGTGACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSFCSQE*HIVVTH Trigger: ATGGGTCACTACTATGTGCCACTCCTGAGAGCAGAA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTGGAACTTATCAGTTGTaGGCTGACTCTGACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSFSKVVLSWSLRVCNATGTYQL*ADSDLE Trigger: TTCCAAGTCAGAGTCAGCCCACAACTGATAAGTTCC...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031474.11 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAAAACAGAAACAGGTaGTGGAAGGGCCTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPLGLFPGHLIGCLVLRAQNRNR*WKGLLP Trigger: GGGGAGGAGGCCCTTCCACCACCTGTTTCTGTTTTG...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031474.11 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACAAAACAGAAACAGGTaGTGGAAGGGCCTCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEQNRNR*WKGLLP Trigger: GGGGAGGAGGCCCTTCCACCACCTGTTTCTGTTTTG...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTGGCAGCAACATGCATaGCATTGTACCTACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSWQQHA*HCTYIL Trigger: AAGGATGTAGGTACAATGTCATGCATGTTGCTGCCA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTCAGCTTTCTGGTCTaGGGACCACAGCTCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEFSFLV*GPQLPN Trigger: ATTGGGGAGCTGTGGTCCTCAGACCAGAAAGCTGAA...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTCAGCCATTGCCTCTaGCACCTCAGTGTTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEFSHCL*HLSVGP Trigger: AGGACCAACACTGAGGTGTCAGAGGCAATGGCTGAA...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTCCAACTCTGTCTGTCTaGGGGCGAGTAGCACATGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLPTLSV*GRVAHD Trigger: GTCATGTGCTACTCGCCCTCAGACAGACAGAGTTGG...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTCGTCCTGAGCAGCTATaGGAGCAATCGAGATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLRPEQL*EQSRST Trigger: GGTGGATCTCGATTGCTCTCATAGCTGCTCAGGACG...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCTTTCGAAAATCTTCTaGTTTGGATGGACTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSFSKVVLSWSLRVCNATLSKIF*FGWTQR Trigger: CCTCTGAGTCCATCCAAAGCAGAAGATTTTCGAAAG...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR GCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATATGGCAGGAGGAGATaGCAGCAAGTCACTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEYGRRR*QQVTVC Trigger: GCAGACAGTGACTTGCTGGCATCTCCTCCTGCCATA...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTGGCACTGAAGGGTACTaGGTGGACACTGGATGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLGTEGY*VDTGCY Trigger: GTAGCATCCAGTGTCCACCCAGTACCCTTCAGTGCC...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTCCAAGGCTTGCTATaGCAGGAGGAGATGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEFQGLL*QEEMPA Trigger: TGCTGGCATCTCCTCCTGCCATAGCAAGCCTTGGAA...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAACAGGAAGAGCCTCTTaGTGGAATCTACCGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWETGRAS*WNLPWQ Trigger: CTGCCACGGTAGATTCCACCAAGAGGCTCTTCCTGT...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGCACAATCAAAGGGTGTaGAGAAAGCACATTGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSHNQRV*RKHIDY Trigger: GTAGTCAATGTGCTTTCTTCACACCCTTTGATTGTG...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTCTGGGTCAGACTTTCTaGTGCTGTGGAAGAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLLGQTF*CCGRSL Trigger: CAGGCTTCTTCCACAGCATCAGAAAGTCTGACCCAG...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATCCACTGCCAAAATCTaGGGTTCTGTCCTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWESTAKI*GSVLKA Trigger: TGCCTTCAGGACAGAACCTCAGATTTTGGCAGTGGA...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCCACTTCACCTGGCTGTaGGGCCACCGCTTCAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILHFTWL*GHRFRR Trigger: GCGTCTGAAGCGGTGGCCGCACAGCCAGGTGAAGTG...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGCTTTCGAAAATCTTCTaGTTTGGATGGACTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSLSKIF*FGWTQR Trigger: CCTCTGAGTCCATCCAAAGCAGAAGATTTTCGAAAG...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTATTCTTCTAGTCTTTaGAAGCCTTCCTGGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSYSSSL*KPSWED Trigger: GTCTTCCCAGGAAGGCTTGCAAAGACTAGAAGAATA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCTTCTTTCCAAGGCTTaGTATGGCAGGAGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FPLGLFPGHLIGCLVLRALLSKA*YGRRRC Trigger: GCATCTCCTCCTGCCATAGCAAGCCTTGGAAAGAAG...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTGTCCTTGAGGTGCCCTaGATAAATGCCATGGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FPLGLFPGHLIGCLVLRAVLEVP*INAMAV Trigger: TACTGCCATGGCATTTATCCAGGGCACCTCAAGGAC...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGTCCTTGAGGTGCCCTaGATAAATGCCATGGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEVLEVP*INAMAV Trigger: TACTGCCATGGCATTTATCCAGGGCACCTCAAGGAC...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGTCACTCCAGCCTTGTaGTTGTCATTCCTGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEVTPAL*LSFLVE Trigger: CTCTACCAGGAATGACAACCACAAGGCTGGAGTGAC...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTATGTCAGCTGGCACATaGAAGCCTGGTTCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPLGLFPGHLIGCLVLRAMSAGT*KPGSLW Trigger: CCAAAGAGAACCAGGCTTCCATGTGCCAGCTGACAT...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGGACTTTCTGATGCTGTaGAAGAAGCCTGCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KWASKMARVKLNSSDWSWDFLML*KKPAFF Trigger: AAAGAAAGCAGGCTTCTTCCACAGCATCAGAAAGTC...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCGGGCCTCCTCCCCATTaGTGGCCTCTAGTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILGPPPH*WPLVPF Trigger: GAAGGGGACTAGAGGCCACCAATGGGGAGGAGGCCC...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTTTCCCGTTTTTATCTaGTGTCTCATGAAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSFPVFI*CLMKAV Trigger: GACAGCCTTCATGAGACACCAGATAAAAACGGGAAA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTGTGCTTTTCCATCTGTaGATTGCTGGGTACAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLVLFHL*IAGYRP Trigger: TGGTCTGTACCCAGCAATCCACAGATGGAAAAGCAC...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAACGTGTGCCACTCTTTaGAAGTGTCTCCCATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWETCATL*KCLPCA Trigger: AGCACATGGGAGACACTTCCAAAGAGTGGCACACGT...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTGTTCCAGTAAGGCCTaGGCTAATTTCTTCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KWASKMARVKLNSSDWSWCSSKA*ANFFSK Trigger: TTTTGAGAAGAAATTAGCTCAGGCCTTACTGGAACA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTTTTGTTTACTGTTTCTaGTTCAGCCAGGCACAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLFVYCF*FSQAQA Trigger: GGCTTGTGCCTGGCTGAATCAGAAACAGTAAACAAA...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGGTGAAGAAAGCACATTaGCTACATCCACATTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSVKKAH*LHPHFQ Trigger: TTGGAAATGTGGATGTAGTCAATGTGCTTTCTTCAC...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTCTTTGGCAGCAACATaGATGACATTGTACCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: KWASKMARVKLNSSDWSWSLAAT*MTLYLH Trigger: ATGTAGGTACAATGTCATGCATGTTGCTGCCAAAGA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR GCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTCTTTGGCAGCAACATaGATGACATTGTACCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSSLAAT*MTLYLH Trigger: ATGTAGGTACAATGTCATGCATGTTGCTGCCAAAGA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTGTACTTCTTTCCACTaGCAAAATCTGAGGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSCTSFH*QNLRFC Trigger: ACAGAACCTCAGATTTTGGCAGTGGAAAGAAGTACA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACAGACAAAACCCATTTCTaGCTTTATCTGGGTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SARWFYLGALGCAMPLGTDKTHF*LYLGKF Trigger: GAACTTACCCAGATAAAGGCAGAAATGGGTTTTGTC...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031474.11 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATCAGTCGAGCCATCATaGCATCCATTGTCACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWESVEPS*HPLSLH Trigger: GTGAAGTGACAATGGATGCCATGATGGCTCGACTGA...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGACAAGCAAAATGCAGTaGTGTATCAAAGCCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSTSKMQ*CIKAHF Trigger: AAAGTGGGCTTTGATACACCACTGCATTTTGCTTGT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGTGCTTTTCCATCTGTaGATTGCTGGGTACAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEVLFHL*IAGYRP Trigger: TGGTCTGTACCCAGCAATCCACAGATGGAAAAGCAC...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTCACAATCAAAGGGTGTaGAGAAAGCACATTGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLHNQRV*RKHIDY Trigger: GTAGTCAATGTGCTTTCTTCACACCCTTTGATTGTG...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTCTGTGGTTTAGAGGGTaGCAAAACCCATTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLLWFRG*QNPFLP Trigger: AGGCAGAAATGGGTTTTGTCACCCTCTAAACCACAG...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031474.11 |
||
| CDS-3UTR GCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGAATTTACAAGCAAAATaGAGTGGTGTATCAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSNLQAK*SGVSKP Trigger: GGGCTTTGATACACCACTGCATTTTGCTTGTAAATT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGAATCCTTTCTTTCAGTaGTGGAGATTTGTTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKSESGHICFSATCFLSNPFFQ*WRFVLA Trigger: AGCCAAAACAAATCTCCAGCACTGAAAGAAAGGATT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACAAATCCTTTCTTTCAGTaGTGGAGATTTGTTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SARWFYLGALGCAMPLGTNPFFQ*WRFVLA Trigger: AGCCAAAACAAATCTCCAGCACTGAAAGAAAGGATT...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR GCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGGAGAAGTGTCTTCTaGTCTCAGGAGTGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLRRSVF*SQEWHI Trigger: TATGTGCCACTCCTGAGAGCAGAAGACACTTCTCCT...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACCAGGCTTACTGGGGCTaGTACCAGCTGGACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYQAYWG*YQLDCI Trigger: GATGCAGTCCAGCTGGTAGCAGCCCCAGTAAGCCTG...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTTCAGTCGAGCCATCATaGCATCCATTGTCACTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLSVEPS*HPLSLH Trigger: GTGAAGTGACAATGGATGCCATGATGGCTCGACTGA...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACATTTTCTAAGGTCATCTaGATTCAAGAGTTTCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SARWFYLGALGCAMPLGTFSKVI*IQEFQS Trigger: CGACTGAAACTCTTGAATCCAGATGACCTTAGAAAA...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTTTGCTTAACTCCTTCTaGATAAGGTATTCTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSFSKVVLSWSLRVCNATLLNSF*IRYSSS Trigger: ACTAGAAGAATACCTTATCCAGAAGGAGTTAAGCAA...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTGGGCTGACTCTGACTTaGAACTGTATTTTGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FPLGLFPGHLIGCLVLRAGLTLT*NCILLV Trigger: AACCAGCAAAATACAGTTCCAAGTCAGAGTCAGCCC...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031474.11 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGGAACTTATCAGTTGTaGGCTGACTCTGACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEGTYQL*ADSDLE Trigger: TTCCAAGTCAGAGTCAGCCCACAACTGATAAGTTCC...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACCCTCCTCCCCATTGGTaGCCTCTAGTCCCCTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYPPPHW*PLVPFH Trigger: ATGGAAGGGGACTAGAGGCCACCAATGGGGAGGAGG...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTTTTCCCGTTTTTATCTaGTGTCTCATGAAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLFPVFI*CLMKAV Trigger: GACAGCCTTCATGAGACACCAGATAAAAACGGGAAA...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| 3UTR CAA 72 bp | GAACAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTaGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EQRFPLGLFPGH*IGCLVLRAQLL Trigger: AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTTGGCAGCAACATGCATaGCATTGTACCTACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLWQQHA*HCTYIL Trigger: AAGGATGTAGGTACAATGTCATGCATGTTGCTGCCA...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACGGATACCCCAGCTCATaGGCTAGCTCCCTTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYGYPSS*ASSLPT Trigger: AGTTGGAAGGGAGCTAGCTCATGAGCTGGGGTATCC...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACCGTCCTGAGCAGCTATaGGAGCAATCGAGATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYRPEQL*EQSRST Trigger: GGTGGATCTCGATTGCTCTCATAGCTGCTCAGGACG...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCCGTCCTGAGCAGCTATaGGAGCAATCGAGATCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILRPEQL*EQSRST Trigger: GGTGGATCTCGATTGCTCTCATAGCTGCTCAGGACG...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTTATTCTTCTAGTCTTTaGAAGCCTTCCTGGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPLGLFPGHLIGCLVLRAYSSSL*KPSWED Trigger: GTCTTCCCAGGAAGGCTTGCAAAGACTAGAAGAATA...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCCTGAAGGGTACTGGGTaGACACTGGATGCTACCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILLKGTG*TLDATA Trigger: AGCGGTAGCATCCAGTGTCCACCCAGTACCCTTCAG...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTTGCTTAACTCCTTCTaGATAAGGTATTCTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KWASKMARVKLNSSDWSWLLNSF*IRYSSS Trigger: ACTAGAAGAATACCTTATCCAGAAGGAGTTAAGCAA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACCACTTTTAGAGGTTTaGAACTTATCAGTTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWEPLLEV*NLSVVG Trigger: GCCCACAACTGATAAGTTCCAAACCTCTAAAAGTGG...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| 3UTR CAA 72 bp | CCCTGCTTCTGCCTAATGAGTGCTGGGCTTAAAGGCTaGCCTGGTCAACATTTTTATAAACAAAAGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: PCFCLMSAGLKG*PGQHFYKQKRI Trigger: GATTCTCTTTTGTTTATAAAAATGTTGACCAGGCAAGCCTTTAAGCCCAGCACTCATTAGGCAGAAGCAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACTTCAGCTTTCTGGTCTaGGGACCACAGCTCCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYFSFLV*GPQLPN Trigger: ATTGGGGAGCTGTGGTCCTCAGACCAGAAAGCTGAA...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACCTGGGTCAGACTTTCTaGTGCTGTGGAAGAAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYLGQTF*CCGRSL Trigger: CAGGCTTCTTCCACAGCATCAGAAAGTCTGACCCAG...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCTATGGCAGGAGGAGATaGCAGCAAGTCACTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILYGRRR*QQVTVC Trigger: GCAGACAGTGACTTGCTGGCATCTCCTCCTGCCATA...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACAACAGAAACAGGTGGTaGAAGGGCCTCCTCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYNRNRW*KGLLPI Trigger: AATGGGGAGGAGGCCCTTCCACCACCTGTTTCTGTT...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTGTGAAGAAAGCACATTaGCTACATCCACATTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLVKKAH*LHPHFQ Trigger: TTGGAAATGTGGATGTAGTCAATGTGCTTTCTTCAC...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR TCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACTCCACTGCCAAAATCTaGGGTTCTGTCCTGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYSTAKI*GSVLKA Trigger: TGCCTTCAGGACAGAACCTCAGATTTTGGCAGTGGA...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACAGGGCGAGTAGCACATaGCAGTGCTTTTCCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYRASST*QCFSIC Trigger: ACAGATGGAAAAGCACTGTCATGTGCTACTCGCCCT...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAAATTTACAAGCAAAATaGAGTGGTGTATCAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWENLQAK*SGVSKP Trigger: GGGCTTTGATACACCACTGCATTTTGCTTGTAAATT...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAAATCCTTTCTTTCAGTaGTGGAGATTTGTTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KASDFIMDGCEPPCGCWENPFFQ*WRFVLA Trigger: AGCCAAAACAAATCTCCAGCACTGAAAGAAAGGATT...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACGCTGTGGAAGAAGCCTaGTTTCTTTCGAGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYAVEEA*FLSRWS Trigger: ACTCCACCTCGAAAGAAAGCAGGCTTCTTCCACAGC...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACCCACGGAGATGGAGTTaGTGTACTTCTTTCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYPRRWS*CTSFHC Trigger: GCAGTGGAAAGAAGTACAGCAACTCCATCTCCGTGG...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTCTGTCTCCCAGGCTTTaGAAATTCAGTTTATTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLLSPRL*KFSLFN Trigger: GTTGAATAAACTGAATTTGCAAAGCCTGGGAGACAG...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACGTCACTCCAGCCTTGTaGTTGTCATTCCTGGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYVTPAL*LSFLVE Trigger: CTCTACCAGGAATGACAACCACAAGGCTGGAGTGAC...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACTGGCACATGGAAGCCTaGTTCTCTTTGGCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYWHMEA*FSLAAT Trigger: TGTTGCTGCCAAAGAGAACCAGGCTTCCATGTGCCA...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACATGTCAGCTGGCACATaGAAGCCTGGTTCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYMSAGT*KPGSLW Trigger: CCAAAGAGAACCAGGCTTCCATGTGCCAGCTGACAT...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCGTCTCTAATGTCAGCTaGCACATGGAAGCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILVSNVS*HMEAWF Trigger: GAACCAGGCTTCCATGTGCCAGCTGACATTAGAGAC...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACGTCTCTAATGTCAGCTaGCACATGGAAGCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYVSNVS*HMEAWF Trigger: GAACCAGGCTTCCATGTGCCAGCTGACATTAGAGAC...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTACAAGCAAAATGCAGTaGTGTATCAAAGCCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLTSKMQ*CIKAHF Trigger: AAAGTGGGCTTTGATACACCACTGCATTTTGCTTGT...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCGGGCTGCTTCTACAGTaGGCAGTATTTGAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILGLLLQ*AVFEAS Trigger: TGAAGCCTCAAATACTGCCCACTGTAGAAGCAGCCC...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACTCTGAGGTTCTGTCCTaGAGGCAGCCTTCATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYSEVLS*RQPSFS Trigger: AGAAAATGAAGGCTGCCTTCAGGACAGAACCTCAGA...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACCTGTGGTTTAGAGGGTaGCAAAACCCATTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYLWFRG*QNPFLP Trigger: AGGCAGAAATGGGTTTTGTCACCCTCTAAACCACAG...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACAGGAGAAGTGTCTTCTaGTCTCAGGAGTGGCACATA | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYRRSVF*SQEWHI Trigger: TATGTGCCACTCCTGAGAGCAGAAGACACTTCTCCT...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACGTGTTGGTCCTGACTTaGTTCTTTCCAAGGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYVLVLT*FFPRLA Trigger: AGCAAGCCTTGGAAAGAAGCAAGTCAGGACCAACAC...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCGTGCTTTTCCATCTGTaGATTGCTGGGTACAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILVLFHL*IAGYRP Trigger: TGGTCTGTACCCAGCAATCCACAGATGGAAAAGCAC...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACGGGCTGACTCTGACTTaGAACTGTATTTTGCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYGLTLT*NCILLV Trigger: AACCAGCAAAATACAGTTCCAAGTCAGAGTCAGCCC...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS-3UTR TCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACCACAATCAAAGGGTGTaGAGAAAGCACATTGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYHNQRV*RKHIDY Trigger: GTAGTCAATGTGCTTTCTTCACACCCTTTGATTGTG...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCCTTTCGAAAATCTTCTaGTTTGGATGGACTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILLSKIF*FGWTQR Trigger: CCTCTGAGTCCATCCAAAGCAGAAGATTTTCGAAAG...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS-3UTR CCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCGACTTTCTGATGCTGTaGAAGAAGCCTGCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILDFLML*KKPAFF Trigger: AAAGAAAGCAGGCTTCTTCCACAGCATCAGAAAGTC...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACGACTTTCTGATGCTGTaGAAGAAGCCTGCTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYDFLML*KKPAFF Trigger: AAAGAAAGCAGGCTTCTTCCACAGCATCAGAAAGTC...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS-3UTR CCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCTTTCCCGTTTTTATCTaGTGTCTCATGAAGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILFPVFI*CLMKAV Trigger: GACAGCCTTCATGAGACACCAGATAAAAACGGGAAA...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS-3UTR TCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACTGTTCCAGTAAGGCCTaGGCTAATTTCTTCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYCSSKA*ANFFSK Trigger: TTTTGAGAAGAAATTAGCTCAGGCCTTACTGGAACA...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACTCTTTGGCAGCAACATaGATGACATTGTACCTACAT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYSLAAT*MTLYLH Trigger: ATGTAGGTACAATGTCATGCATGTTGCTGCCAAAGA...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCTGTACTTCTTTCCACTaGCAAAATCTGAGGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILCTSFH*QNLRFC Trigger: ACAGAACCTCAGATTTTGGCAGTGGAAAGAAGTACA...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS-3UTR GCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACGACAAAACCCATTTCTaGCTTTATCTGGGTAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYDKTHF*LYLGKF Trigger: GAACTTACCCAGATAAAGGCAGAAATGGGTTTTGTC...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS-3UTR GCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACCTGTCTCCCAGGCTTTaGAAATTCAGTTTATTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYLSPRL*KFSLFN Trigger: GTTGAATAAACTGAATTTGCAAAGCCTGGGAGACAG...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS-3UTR CCA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCTTTTCTAAGGTCATCTaGATTCAAGAGTTTCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LVLVIAGEFSMMITRMILFSKVI*IQEFQS Trigger: CGACTGAAACTCTTGAATCCAGATGACCTTAGAAAA...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CCA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACTTGCTTAACTCCTTCTaGATAAGGTATTCTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYLLNSF*IRYSSS Trigger: ACTAGAAGAATACCTTATCCAGAAGGAGTTAAGCAA...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS TCA 90 bp | CCCGCGGCCGCTTCTCTAGCCGGCGGACCAGCCAGCGCACGGCGATaGACAGCACCGAGGCGCCCAGGAGCTCCCAGGCCAGGGCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PAAASLAGGPASARR*TAPRRPGAPRPGPP Trigger: GGGCGGCCCTGGCCTGGGAGCTCCTGGGCGCCTCGGTGCTGTTCATCGCCGTGCGCTGGCTGGTCCGCCGGCTAGAGAAGCGGCCGCGGG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS GCA 90 bp | TTTCAGTCGAGCCATCATGGCATCCATTGTCACTTCACCTGGCTGTaGGGCCACCGCTTCAGACGCGCTGGGCGGAGAGGAGAGCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FQSSHHGIHCHFTWL*GHRFRRAGRRGERP Trigger: GGGACGCTCTCCTCTCCGCCCAGCGCGTCTGAAGCGGTGGCCGCACAGCCAGGTGAAGTGACAATGGATGCCATGATGGCTCGACTGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 90 bp | CAAGAGTTTCAGTCGAGCCATCATGGCATCCATTGTCACTTCACCTaGCTGTGCGGCCACCGCTTCAGACGCGCTGGGCGGAGAGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QEFQSSHHGIHCHFT*LCGHRFRRAGRRGE Trigger: CTCTCCTCTCCGCCCAGCGCGTCTGAAGCGGTGGCCGCACAGCCAGGTGAAGTGACAATGGATGCCATGATGGCTCGACTGAAACTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS GCA 90 bp | AGGAGGAGGTGTGGCCAGGCTTACTGGGGCTGCTACCAGCTGGACTaGATCGTCCTGAGCAGCTATGAGAGCAATCGAGATCCACCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RRRCGQAYWGCYQLD*IVLSSYESNRDPPT Trigger: AGTTGGTGGATCTCGATTGCTCTCATAGCTGCTCAGGACGATGCAGTCCAGCTGGTAGCAGCCCCAGTAAGCCTGGCCACACCTCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 90 bp | GCCTTGTGGTTGTCATTCCTGGTAGAGGCACTGAAGGGTACTGGGTaGACACTGGATGCTACCGCTTCCTCTTCTGGAGGGTTCAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALWLSFLVEALKGTG*TLDATASSSGGFKP Trigger: GGGCTTGAACCCTCCAGAAGAGGAAGCGGTAGCATCCAGTGTCCACCCAGTACCCTTCAGTGCCTCTACCAGGAATGACAACCACAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS TCA 90 bp | GTGGCCAGGCTTACTGGGGCTGCTACCAGCTGGACTGCATCGTCCTaGGCAGCTATGAGAGCAATCGAGATCCACCAACTCAGTTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VARLTGAATSWTASS*AAMRAIEIHQLSCE Trigger: TTCACAACTGAGTTGGTGGATCTCGATTGCTCTCATAGCTGCTCAGGACGATGCAGTCCAGCTGGTAGCAGCCCCAGTAAGCCTGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS GCA 90 bp | GTCATTCCTGGTAGAGGCACTGAAGGGTACTGGGTGGACACTGGATaGTACCGCTTCCTCTTCTGGAGGGTTCAAGCCCACACTGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: VIPGRGTEGYWVDTG*YRFLFWRVQAHTVT Trigger: GGTTACAGTGTGGGCTTGAACCCTCCAGAAGAGGAAGCGGTAGCATCCAGTGTCCACCCAGTACCCTTCAGTGCCTCTACCAGGAATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACAGTAACCGCGCTGGGCTaGGGAAGGGAAGAGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SARWFYLGALGCAMPLGTVTALG*GREEVS Trigger: GCTGACCTCTTCCCTTCCCAAGCCCAGCGCGGTTAC...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGAGGGCCTCCTCCCCATaGGTGGCCTCTAGTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLKSESGHICFSATCFLSRASSP*VASSPL Trigger: AAGGGGACTAGAGGCCACCAATGGGGAGGAGGCCCT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS CCA 90 bp | TCCAGCCTTGTGGTTGTCATTCCTGGTAGAGGCACTGAAGGGTACTaGGTGGACACTGGATGCTACCGCTTCCTCTTCTGGAGGGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSLVVVIPGRGTEGY*VDTGCYRFLFWRVQ Trigger: TTGAACCCTCCAGAAGAGGAAGCGGTAGCATCCAGTGTCCACCCAGTACCCTTCAGTGCCTCTACCAGGAATGACAACCACAAGGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGACAGCTTTCCGCAGCTaGGCCGTGAGGTCCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LLKSESGHICFSATCFLSTAFRS*AVRSWV Trigger: TACCCAGGACCTCACGGCCAAGCTGCGGAAAGCTGT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCACGTGTGCCACTCTTaGGAAGTGTCTCCCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSFSKVVLSWSLRVCNATHVCHS*EVSPMC Trigger: GCACATGGGAGACACTTCCAAAGAGTGGCACACGTG...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS TCA 90 bp | TTACTGGGGCTGCTACCAGCTGGACTGCATCGTCCTGAGCAGCTATaGGAGCAATCGAGATCCACCAACTCAGTTGTGAACTTCCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLGLLPAGLHRPEQL*EQSRSTNSVVNFPL Trigger: CAAAGGGAAGTTCACAACTGAGTTGGTGGATCTCGATTGCTCTCATAGCTGCTCAGGACGATGCAGTCCAGCTGGTAGCAGCCCCAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS GCA 90 bp | GACATTTCAGCCATTGCCTCTGACACCTCAGTGTTGGTCCTGACTTaGTTCTTTCCAAGGCTTGCTATGGCAGGAGGAGATGCCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DISAIASDTSVLVLT*FFPRLAMAGGDASK Trigger: CTTGCTGGCATCTCCTCCTGCCATAGCAAGCCTTGGAAAGAAGCAAGTCAGGACCAACACTGAGGTGTCAGAGGCAATGGCTGAAATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 90 bp | AAAGCTCTCAGTGTCATCACAGGATCTCTGGGGCTGCTTCTACAGTaGGCAGTATTTGAGGCTTCAGCTTTCTGGTCTGAGGACCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: KALSVITGSLGLLLQ*AVFEASAFWSEDHS Trigger: GCTGTGGTCCTCAGACCAGAAAGCTGAAGCCTCAAATACTGCCCACTGTAGAAGCAGCCCCAGAGATCCTGTGATGACACTGAGAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 90 bp | GACTCAGAGGTCCCACGAAAGCTCTCAGTGTCATCACAGGATCTCTaGGGCTGCTTCTACAGTGGGCAGTATTTGAGGCTTCAGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DSEVPRKLSVSSQDL*GCFYSGQYLRLQLS Trigger: AGAAAGCTGAAGCCTCAAATACTGCCCACTGTAGAAGCAGCCCCAGAGATCCTGTGATGACACTGAGAGCTTTCGTGGGACCTCTGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCCATCATGGCATCCATaGTCACTTCACCTGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSFSKVVLSWSLRVCNATPSWHP*SLHLAV Trigger: CACAGCCAGGTGAAGTGACAATGGATGCCATGATGG...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTACAGCTTTCCGCAGCTaGGCCGTGAGGTCCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLTAFRS*AVRSWV Trigger: TACCCAGGACCTCACGGCCAAGCTGCGGAAAGCTGT...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTGCTTCTTTCCAAGGCTaGCTATGGCAGGAGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSFSKVVLSWSLRVCNATASFQG*LWQEEM Trigger: CATCTCCTCCTGCCATAGCAAGCCTTGGAAAGAAGC...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS TCA 90 bp | TGTGAACTTCCCTTTGAGTGCAGGACTTGGCCAACTCTGTCTGTCTaGGGGCGAGTAGCACATGACAGTGCTTTTCCATCTGTGGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: CELPFECRTWPTLSV*GRVAHDSAFPSVDC Trigger: GCAATCCACAGATGGAAAAGCACTGTCATGTGCTACTCGCCCTCAGACAGACAGAGTTGGCCAAGTCCTGCACTCAAAGGGAAGTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 90 bp | ACTGAAGGGTACTGGGTGGACACTGGATGCTACCGCTTCCTCTTCTaGAGGGTTCAAGCCCACACTGTAACCAAAATCTCTGTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TEGYWVDTGCYRFLF*RVQAHTVTKISVFR Trigger: TCTGAAGACAGAGATTTTGGTTACAGTGTGGGCTTGAACCCTCCAGAAGAGGAAGCGGTAGCATCCAGTGTCCACCCAGTACCCTTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACACCATCATGGCATCCATaGTCACTTCACCTGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SARWFYLGALGCAMPLGTPSWHP*SLHLAV Trigger: CACAGCCAGGTGAAGTGACAATGGATGCCATGATGG...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAACAGCTTTCCGCAGCTaGGCCGTGAGGTCCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KASDFIMDGCEPPCGCWETAFRS*AVRSWV Trigger: TACCCAGGACCTCACGGCCAAGCTGCGGAAAGCTGT...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGGGCCTCCTCCCCATaGGTGGCCTCTAGTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLRASSP*VASSPL Trigger: AAGGGGACTAGAGGCCACCAATGGGGAGGAGGCCCT...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031474.11 |
||
| CDS-3UTR CAA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGGCTTCTTTCCAAGGCTaGCTATGGCAGGAGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KWASKMARVKLNSSDWSWASFQG*LWQEEM Trigger: CATCTCCTCCTGCCATAGCAAGCCTTGGAAAGAAGC...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGGAAGCCTGGTTCTCTTaGGCAGCAACATGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: KWASKMARVKLNSSDWSWEAWFS*AATCMT Trigger: TGTCATGCATGTTGCTGCCAAAGAGAACCAGGCTTC...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGCGAAAATCTTCTGCTTaGGATGGACTCAGAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLKSESGHICFSATCFLSRKSSA*DGLRGP Trigger: GGGACCTCTGAGTCCATCCAAAGCAGAAGATTTTCG...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS TCA 90 bp | TCAGCTGGCACATGGAAGCCTGGTTCTCTTTGGCAGCAACATGCATaGCATTGTACCTACATCCTTCTTGTACAATGGTTGGGTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SAGTWKPGSLWQQHA*HCTYILLVQWLGCP Trigger: GGGACAACCCAACCATTGTACAAGAAGGATGTAGGTACAATGTCATGCATGTTGCTGCCAAAGAGAACCAGGCTTCCATGTGCCAGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 90 bp | GTAAACATGGATCCTCTCATGTCTCACAGGGCCATCCTCATATACTaGACACACTCCATAGTACACAAGTGGCTCCTTAGGAGCTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VNMDPLMSHRAILIY*THSIVHKWLLRSCH Trigger: GTGACAGCTCCTAAGGAGCCACTTGTGTACTATGGAGTGTGTCCAGTATATGAGGATGGCCCTGTGAGACATGAGAGGATCCATGTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CCA 90 bp | TCAGGGTTCTCCAGAGTCTCTAATGTCAGCTGGCACATGGAAGCCTaGTTCTCTTTGGCAGCAACATGCATGACATTGTACCTACATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGFSRVSNVSWHMEA*FSLAATCMTLYLHP Trigger: AGGATGTAGGTACAATGTCATGCATGTTGCTGCCAAAGAGAACCAGGCTTCCATGTGCCAGCTGACATTAGAGACTCTGGAGAACCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGGACCCTTTGATCAACTaGGCAGCTTGTAAAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KWASKMARVKLNSSDWSWDPLIN*AACKAS Trigger: GGAAGCTTTACAAGCTGCCAAGTTGATCAAAGGGTC...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTCCCACGGAGATGGAGTaGCTGTACTTCTTTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLPTEME*LYFFPL Trigger: CAGTGGAAAGAAGTACAGCAACTCCATCTCCGTGGG...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGAAGACATTTCAGCCATaGCCTCTGACACCTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLKSESGHICFSATCFLSKTFQP*PLTPQC Trigger: ACACTGAGGTGTCAGAGGCAATGGCTGAAATGTCTT...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACACGTGTGCCACTCTTaGGAAGTGTCTCCCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KASDFIMDGCEPPCGCWEHVCHS*EVSPMC Trigger: GCACATGGGAGACACTTCCAAAGAGTGGCACACGTG...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGTGTAGCATGTCCATGTaGTCATCTGGGTACATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KWASKMARVKLNSSDWSWCSMSM*SSGYIR Trigger: TCTGATGTACCCAGATGACAACATGGACATGCTACA...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACATGTAGCATGTCCATGTaGTCATCTGGGTACATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SARWFYLGALGCAMPLGTCSMSM*SSGYIR Trigger: TCTGATGTACCCAGATGACAACATGGACATGCTACA...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTGTAGCATGTCCATGTaGTCATCTGGGTACATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLKSESGHICFSATCFLSCSMSM*SSGYIR Trigger: TCTGATGTACCCAGATGACAACATGGACATGCTACA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACCCACGGAGATGGAGTaGCTGTACTTCTTTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: KASDFIMDGCEPPCGCWEPTEME*LYFFPL Trigger: CAGTGGAAAGAAGTACAGCAACTCCATCTCCGTGGG...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | CCCAGCTTCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTACCACTTTTAGAGGTTaGGAACTTATCAGTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSFSKVVLSWSLRVCNATTTFRG*ELISCG Trigger: CCCACAACTGATAAGTTCCAAACCTCTAAAAGTGGT...AGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGAAGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031474.11 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGCTTCTTTCCAAGGCTaGCTATGGCAGGAGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KASDFIMDGCEPPCGCWEASFQG*LWQEEM Trigger: CATCTCCTCCTGCCATAGCAAGCCTTGGAAAGAAGC...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS TCA 90 bp | TCCCACGGAGATGGAGTTGCTGTACTTCTTTCCACTGCCAAAATCTaGGGTTCTGTCCTGAAGGCAGCCTTCATTTTCTCGTATTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SHGDGVAVLLSTAKI*GSVLKAAFIFSYFL Trigger: CAAGAAATACGAGAAAATGAAGGCTGCCTTCAGGACAGAACCTCAGATTTTGGCAGTGGAAAGAAGTACAGCAACTCCATCTCCGTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS GCA 90 bp | AATGTCAGCTGGCACATGGAAGCCTGGTTCTCTTTGGCAGCAACATaGATGACATTGTACCTACATCCTTCTTGTACAATGGTTGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NVSWHMEAWFSLAAT*MTLYLHPSCTMVGL Trigger: CAACCCAACCATTGTACAAGAAGGATGTAGGTACAATGTCATGCATGTTGCTGCCAAAGAGAACCAGGCTTCCATGTGCCAGCTGACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS GCA 90 bp | AATGCCTCGTTCTGGGTCAGACTTTCTGATGCTGTGGAAGAAGCCTaGTTTCTTTCGAGGTGGAGTTTTCCAGAGCTTTCGAAAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NASFWVRLSDAVEEA*FLSRWSFPELSKIF Trigger: GAAGATTTTCGAAAGCTCTGGAAAACTCCACCTCGAAAGAAAGCAGGCTTCTTCCACAGCATCAGAAAGTCTGACCCAGAACGAGGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS GCA 90 bp | TACTGTCATCATCCCCATCTAGAAATGCTCCCACGGAGATGGAGTTaGTGTACTTCTTTCCACTGCCAAAATCTGAGGTTCTGTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: YCHHPHLEMLPRRWS*CTSFHCQNLRFCPE Trigger: TTCAGGACAGAACCTCAGATTTTGGCAGTGGAAAGAAGTACAGCAACTCCATCTCCGTGGGAGCATTTCTAGATGGGGATGATGACAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 90 bp | CCAAACTACTGTCATCATCCCCATCTAGAAATGCTCCCACGGAGATaGAGTTGCTGTACTTCTTTCCACTGCCAAAATCTGAGGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PNYCHHPHLEMLPRR*SCCTSFHCQNLRFC Trigger: ACAGAACCTCAGATTTTGGCAGTGGAAAGAAGTACAGCAACTCCATCTCCGTGGGAGCATTTCTAGATGGGGATGATGACAGTAGTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACGTAACCGCGCTGGGCTaGGGAAGGGAAGAGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYVTALG*GREEVS Trigger: GCTGACCTCTTCCCTTCCCAAGCCCAGCGCGGTTAC...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTGACCCTTTGATCAACTaGGCAGCTTGTAAAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLDPLIN*AACKAS Trigger: GGAAGCTTTACAAGCTGCCAAGTTGATCAAAGGGTC...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | AAATGGGCGAGCAAGATGGCTCGGGTAAAACTCAATTCCAGTGACTGGAGTTGGGCAACATGCATGACATaGTACCTACATCCTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KWASKMARVKLNSSDWSWATCMT*YLHPSC Trigger: ACAAGAAGGATGTAGGTACAATGTCATGCATGTTGC...CCAACTCCAGTCACTGGAATTGAGTTTTACCCGAGCCATCTTGCTCGCCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGAAGCCTGGTTCTCTTaGGCAGCAACATGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: KASDFIMDGCEPPCGCWEEAWFS*AATCMT Trigger: TGTCATGCATGTTGCTGCCAAAGAGAACCAGGCTTC...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTTACAGTGGGCAGTATTaGAGGCTTCAGCTTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLYSGQY*RLQLSG Trigger: ACCAGAAAGCTGAAGCCTCAAATACTGCCCACTGTA...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCGAAAATCTTCTGCTTaGGATGGACTCAGAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FPLGLFPGHLIGCLVLRARKSSA*DGLRGP Trigger: GGGACCTCTGAGTCCATCCAAAGCAGAAGATTTTCG...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTCCCACGGAGATGGAGTaGCTGTACTTCTTTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLPTEME*LYFFPL Trigger: CAGTGGAAAGAAGTACAGCAACTCCATCTCCGTGGG...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTTTCCATCTGTGGATaGCTGGGTACAGACCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KASDFIMDGCEPPCGCWEFSICG*LGTDQG Trigger: ACCCTGGTCTGTACCCAGCAATCCACAGATGGAAAA...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 90 bp | GTCAGACTTTCTGATGCTGTGGAAGAAGCCTGCTTTCTTTCGAGGTaGAGTTTTCCAGAGCTTTCGAAAATCTTCTGCTTTGGATGGACT | + |
|
Preference number: 5 (lower is better) Translates to: VRLSDAVEEACFLSR*SFPELSKIFCFGWT Trigger: AGTCCATCCAAAGCAGAAGATTTTCGAAAGCTCTGGAAAACTCCACCTCGAAAGAAAGCAGGCTTCTTCCACAGCATCAGAAAGTCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTGAAGCCTGGTTCTCTTaGGCAGCAACATGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLEAWFS*AATCMT Trigger: TGTCATGCATGTTGCTGCCAAAGAGAACCAGGCTTC...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGTTCAGTGCTGGAGATTaGTTTTGGCTTCTTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LLKSESGHICFSATCFLSFSAGD*FWLLSQ Trigger: TTGTGAAAGAAGCCAAAACAAATCTCCAGCACTGAA...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTTCTGACACCTCAGTGTaGGTCCTGACTTGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FPLGLFPGHLIGCLVLRASDTSV*VLTCFF Trigger: AAAGAAGCAAGTCAGGACCAACACTGAGGTGTCAGA...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTAAGACATTTCAGCCATaGCCTCTGACACCTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FPLGLFPGHLIGCLVLRAKTFQP*PLTPQC Trigger: ACACTGAGGTGTCAGAGGCAATGGCTGAAATGTCTT...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGCTGTTTGCTCGTTCTTaGTTTACTGTTTCTGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLKSESGHICFSATCFLSLFARS*FTVSDS Trigger: TGAATCAGAAACAGTAAACAAAGAACGAGCAAACAG...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCAAGGTGGTTTTATCTTGGAGCCTTAGGGTGTGCAATGCCACTCGGTACAGGTTTTTGTAACTGTTaGCTCGTTCTTTGTTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: SARWFYLGALGCAMPLGTGFCNC*LVLCLL Trigger: CAGTAAACAAAGAACGAGCAAACAGTTACAAAAACC...TGTACCGAGTGGCATTGCACACCCTAAGGCTCCAAGATAAAACCACCTTGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | TTACTGAAGTCTGAGTCAGGGCACATCTGCTTTTCTGCCACCTGCTTTCTCTCGGGTTTTTGTAACTGTTaGCTCGTTCTTTGTTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: LLKSESGHICFSATCFLSGFCNC*LVLCLL Trigger: CAGTAAACAAAGAACGAGCAAACAGTTACAAAAACC...CGAGAGAAAGCAGGTGGCAGAAAAGCAGATGTGCCCTGACTCAGACTTCAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | TTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTTGTACAATGGTTGGGTaGTCCCCAGAACCAATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: FPLGLFPGHLIGCLVLRACTMVG*SPEPIR Trigger: TCTAATTGGTTCTGGGGACAACCCAACCATTGTACA...AGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATGTACAATGGTTGGGTaGTCCCCAGAACCAATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: KASDFIMDGCEPPCGCWECTMVG*SPEPIR Trigger: TCTAATTGGTTCTGGGGACAACCCAACCATTGTACA...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTTACAGTGGGCAGTATTaGAGGCTTCAGCTTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLYSGQY*RLQLSG Trigger: ACCAGAAAGCTGAAGCCTCAAATACTGCCCACTGTA...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTTCTGACACCTCAGTGTaGGTCCTGACTTGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLSDTSV*VLTCFF Trigger: AAAGAAGCAAGTCAGGACCAACACTGAGGTGTCAGA...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | CAAAGATTCCCTTTGGGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTTGTACAATGGTTGGGTaGTCCCCAGAACCAATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: QRFPLGLFPGHLIGCLVLCTMVG*SPEPIR Trigger: TCTAATTGGTTCTGGGGACAACCCAACCATTGTACA...AAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCCCAAAGGGAATCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAAGCAACATGCATGACATaGTACCTACATCCTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KASDFIMDGCEPPCGCWEATCMT*YLHPSC Trigger: ACAAGAAGGATGTAGGTACAATGTCATGCATGTTGC...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACCACGTGTGCCACTCTTaGGAAGTGTCTCCCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYHVCHS*EVSPMC Trigger: GCACATGGGAGACACTTCCAAAGAGTGGCACACGTG...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCCCATCATGGCATCCATaGTCACTTCACCTGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVLVIAGEFSMMITRMILPSWHP*SLHLAV Trigger: CACAGCCAGGTGAAGTGACAATGGATGCCATGATGG...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | GGATTGTTTCCAGGTCACTTGATTGGCTGTCTTGTACTTAGAGCTCAGCTGCTTGGTTTTTGTAACTGTTaGCTCGTTCTTTGTTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: GLFPGHLIGCLVLRAQLLGFCNC*LVLCLL Trigger: CAGTAAACAAAGAACGAGCAAACAGTTACAAAAACC...AAGCAGCTGAGCTCTAAGTACAAGACAGCCAATCAAGTGACCTGGAAACAATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 |
||
| CDS GCA 90 bp | GCCTTTTTGCTTAACTCCTTCTGGATAAGGTATTCTTCTAGTCTTTaGAAGCCTTCCTGGGAAGACAGATCAACAAAACATCCCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: AFLLNSFWIRYSSSL*KPSWEDRSTKHPRN Trigger: ATTTCTGGGATGTTTTGTTGATCTGTCTTCCCAGGAAGGCTTGCAAAGACTAGAAGAATACCTTATCCAGAAGGAGTTAAGCAAAAAGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 90 bp | TCCACATTTAAGTCCAGCTTTCATAACTTCTTTTCTAAGGTCATCTaGATTCAAGAGTTTCAGTCGAGCCATCATGGCATCCATTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: STFKSSFHNFFSKVI*IQEFQSSHHGIHCH Trigger: GTGACAATGGATGCCATGATGGCTCGACTGAAACTCTTGAATCCAGATGACCTTAGAAAAGAAGTTATGAAAGCTGGACTTAAATGTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACTGTTTGCTCGTTCTTaGTTTACTGTTTCTGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: KASDFIMDGCEPPCGCWELFARS*FTVSDS Trigger: TGAATCAGAAACAGTAAACAAAGAACGAGCAAACAG...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCCGAAAATCTTCTGCTTaGGATGGACTCAGAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVLVIAGEFSMMITRMILRKSSA*DGLRGP Trigger: GGGACCTCTGAGTCCATCCAAAGCAGAAGATTTTCG...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS-3UTR CAA 90 bp | AAGGCATCAGATTTTATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAACAGTTTATTCAACTCTaGAGTCAAAACAGAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KASDFIMDGCEPPCGCWEQFIQL*SQNRNR Trigger: CCTGTTTCTGTTTTGACTCAAGAGTTGAATAAACTG...TTCCCAGCAACCACATGGTGGCTCACAACCATCCATAATAAAATCTGATGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCGACCCTTTGATCAACTaGGCAGCTTGTAAAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVLVIAGEFSMMITRMILDPLIN*AACKAS Trigger: GGAAGCTTTACAAGCTGCCAAGTTGATCAAAGGGTC...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACTACAGTGGGCAGTATTaGAGGCTTCAGCTTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYYSGQY*RLQLSG Trigger: ACCAGAAAGCTGAAGCCTCAAATACTGCCCACTGTA...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS-3UTR CAA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACTCTGACACCTCAGTGTaGGTCCTGACTTGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYSDTSV*VLTCFF Trigger: AAAGAAGCAAGTCAGGACCAACACTGAGGTGTCAGA...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACAAGACATTTCAGCCATaGCCTCTGACACCTCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYKTFQP*PLTPQC Trigger: ACACTGAGGTGTCAGAGGCAATGGCTGAAATGTCTT...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACGCAACATGCATGACATaGTACCTACATCCTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYATCMT*YLHPSC Trigger: ACAAGAAGGATGTAGGTACAATGTCATGCATGTTGC...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | GTATTTTCTAAAATACCAGTACCCTCAAAGCGAGGATTAAGTTATTCAGGATACACCACTTTTAGAGGTTaGGAACTTATCAGTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VFSKIPVPSKRGLSYSGYTTFRG*ELISCG Trigger: CCCACAACTGATAAGTTCCAAACCTCTAAAAGTGGT...GTATCCTGAATAACTTAATCCTCGCTTTGAGGGTACTGGTATTTTAGAAAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
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| CDS TCA 90 bp | TATTCTTTCGGTTTTTCACAATCAAAGGGTGTGAAGAAAGCACATTaGCTACATCCACATTTCCAAATTTACAAGCAAAATGCAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YSFGFSQSKGVKKAH*LHPHFQIYKQNAVV Trigger: CACCACTGCATTTTGCTTGTAAATTTGGAAATGTGGATGTAGTCAATGTGCTTTCTTCACACCCTTTGATTGTGAAAAACCGAAAGAATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS-3UTR CAA 90 bp | TTGGTTTTAGTTATTGCTGGTGAGTTTTCTATGATGATTACTCGCATGATTCTCTTCAGTGCTGGAGATTaGTTTTGGCTTCTTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LVLVIAGEFSMMITRMILFSAGD*FWLLSQ Trigger: TTGTGAAAGAAGCCAAAACAAATCTCCAGCACTGAA...GAGAATCATGCGAGTAATCATCATAGAAAACTCACCAGCAATAACTAAAACCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS TCA 72 bp | GCTTCTCTAGCCGGCGGACCAGCCAGCGCACGGCGATaGACAGCACCGAGGCGCCCAGGAGCTCCCAGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASLAGGPASARR*TAPRRPGAPRP Trigger: TGGCCTGGGAGCTCCTGGGCGCCTCGGTGCTGTTCATCGCCGTGCGCTGGCTGGTCCGCCGGCTAGAGAAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 72 bp | CAGTCGAGCCATCATGGCATCCATTGTCACTTCACCTaGCTGTGCGGCCACCGCTTCAGACGCGCTGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: QSSHHGIHCHFT*LCGHRFRRAGR Trigger: CCGCCCAGCGCGTCTGAAGCGGTGGCCGCACAGCCAGGTGAAGTGACAATGGATGCCATGATGGCTCGACTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS GCA 72 bp | AGCCATCATGGCATCCATTGTCACTTCACCTGGCTGTaGGGCCACCGCTTCAGACGCGCTGGGCGGAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SHHGIHCHFTWL*GHRFRRAGRRG Trigger: TCCTCTCCGCCCAGCGCGTCTGAAGCGGTGGCCGCACAGCCAGGTGAAGTGACAATGGATGCCATGATGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS GCA 72 bp | CAGCCAGGCACAAGCCATCTGCTTTCAGCCCATCACTaGCACCGAGGGGCACTGCCTTCACAGGAGACAGTA | + |
|
Preference number: 6 (lower is better) Translates to: QPGTSHLLSAHH*HRGALPSQETV Trigger: TACTGTCTCCTGTGAAGGCAGTGCCCCTCGGTGGCAGTGATGGGCTGAAAGCAGATGGCTTGTGCCTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS GCA 72 bp | GGTAGAGGCACTGAAGGGTACTGGGTGGACACTGGATaGTACCGCTTCCTCTTCTGGAGGGTTCAAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GRGTEGYWVDTG*YRFLFWRVQAH Trigger: GTGGGCTTGAACCCTCCAGAAGAGGAAGCGGTAGCATCCAGTGTCCACCCAGTACCCTTCAGTGCCTCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 72 bp | TTCCCGTCCACAGATGGAGGAGTCCTTGAGGTGCCCTaGATAAATGCCATGGCAGTAACCGCGCTGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FPSTDGGVLEVP*INAMAVTALGL Trigger: CAAGCCCAGCGCGGTTACTGCCATGGCATTTATCCAGGGCACCTCAAGGACTCCTCCATCTGTGGACGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CAA 72 bp | CTACAGAGCTGCAAGTCGGGCCACGTGTGCCACTCTTaGGAAGTGTCTCCCATGTGCTGGACTGTAGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LQSCKSGHVCHS*EVSPMCWTVAS Trigger: GGACGCTACAGTCCAGCACATGGGAGACACTTCCAAAGAGTGGCACACGTGGCCCGACTTGCAGCTCTGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS GCA 72 bp | TGTGGCCAGGCTTACTGGGGCTGCTACCAGCTGGACTaGATCGTCCTGAGCAGCTATGAGAGCAATCGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: CGQAYWGCYQLD*IVLSSYESNRD Trigger: ATCTCGATTGCTCTCATAGCTGCTCAGGACGATGCAGTCCAGCTGGTAGCAGCCCCAGTAAGCCTGGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS TCA 72 bp | CTTACTGGGGCTGCTACCAGCTGGACTGCATCGTCCTaGGCAGCTATGAGAGCAATCGAGATCCACCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: LTGAATSWTASS*AAMRAIEIHQL Trigger: GAGTTGGTGGATCTCGATTGCTCTCATAGCTGCTCAGGACGATGCAGTCCAGCTGGTAGCAGCCCCAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 72 bp | TTGTCATTCCTGGTAGAGGCACTGAAGGGTACTGGGTaGACACTGGATGCTACCGCTTCCTCTTCTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSFLVEALKGTG*TLDATASSSGG Trigger: CCCTCCAGAAGAGGAAGCGGTAGCATCCAGTGTCCACCCAGTACCCTTCAGTGCCTCTACCAGGAATGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CCA 72 bp | GTGGTTGTCATTCCTGGTAGAGGCACTGAAGGGTACTaGGTGGACACTGGATGCTACCGCTTCCTCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VVVIPGRGTEGY*VDTGCYRFLFW Trigger: CCAGAAGAGGAAGCGGTAGCATCCAGTGTCCACCCAGTACCCTTCAGTGCCTCTACCAGGAATGACAACCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS CAA 72 bp | AGTGGCTCCTTAGGAGCTGTCACTCCAGCCTTGTGGTaGTCATTCCTGGTAGAGGCACTGAAGGGTACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SGSLGAVTPALW*SFLVEALKGTG Trigger: CCCAGTACCCTTCAGTGCCTCTACCAGGAATGACAACCACAAGGCTGGAGTGACAGCTCCTAAGGAGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
||
| CDS TCA 72 bp | CTGAGTTTGTTTCCCGTCCACAGATGGAGGAGTCCTTaGGGTGCCCTGGATAAATGCCATGGCAGTAACCGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLFPVHRWRSP*GALDKCHGSNR Trigger: GCGGTTACTGCCATGGCATTTATCCAGGGCACCTCAAGGACTCCTCCATCTGTGGACGGGAAACAAACTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 72 bp | GATTCAAGAGTTTCAGTCGAGCCATCATGGCATCCATaGTCACTTCACCTGGCTGTGCGGCCACCGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: DSRVSVEPSWHP*SLHLAVRPPLQ Trigger: CTGAAGCGGTGGCCGCACAGCCAGGTGAAGTGACAATGGATGCCATGATGGCTCGACTGAAACTCTTGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS TCA 72 bp | CAGGAAGAGCCTCTTGGTGGAATCTACCGTGGCAGATaGGAGTATAGGTTCCAGACCAGCCTGAACTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: QEEPLGGIYRGR*EYRFQTSLNSK Trigger: CTTGGAGTTCAGGCTGGTCTGGAACCTATACTCTCATCTGCCACGGTAGATTCCACCAAGAGGCTCTTCCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS TCA 72 bp | CCCTTTGAGTGCAGGACTTGGCCAACTCTGTCTGTCTaGGGGCGAGTAGCACATGACAGTGCTTTTCCATCT | + |
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Preference number: 6 (lower is better) Translates to: PFECRTWPTLSV*GRVAHDSAFPS Trigger: AGATGGAAAAGCACTGTCATGTGCTACTCGCCCTCAGACAGACAGAGTTGGCCAAGTCCTGCACTCAAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS TCA 72 bp | CTGCTACCAGCTGGACTGCATCGTCCTGAGCAGCTATaGGAGCAATCGAGATCCACCAACTCAGTTGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: LLPAGLHRPEQL*EQSRSTNSVVN Trigger: GTTCACAACTGAGTTGGTGGATCTCGATTGCTCTCATAGCTGCTCAGGACGATGCAGTCCAGCTGGTAGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS GCA 72 bp | CTCAGTGTTGGTCCTGACTTGCTTCTTTCCAAGGCTTaGTATGGCAGGAGGAGATGCCAGCAAGTCACTGTC | + |
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Preference number: 6 (lower is better) Translates to: LSVGPDLLLSKA*YGRRRCQQVTV Trigger: GACAGTGACTTGCTGGCATCTCCTCCTGCCATAGCAAGCCTTGGAAAGAAGCAAGTCAGGACCAACACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS GCA 72 bp | GCCATTGCCTCTGACACCTCAGTGTTGGTCCTGACTTaGTTCTTTCCAAGGCTTGCTATGGCAGGAGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: AIASDTSVLVLT*FFPRLAMAGGD Trigger: ATCTCCTCCTGCCATAGCAAGCCTTGGAAAGAAGCAAGTCAGGACCAACACTGAGGTGTCAGAGGCAATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CCA 72 bp | GGTCATCTGGATTCAAGAGTTTCAGTCGAGCCATCATaGCATCCATTGTCACTTCACCTGGCTGTGCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GHLDSRVSVEPS*HPLSLHLAVRP Trigger: TGGCCGCACAGCCAGGTGAAGTGACAATGGATGCCATGATGGCTCGACTGAAACTCTTGAATCCAGATGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CCA 72 bp | ACAAGTGGCTCCTTAGGAGCTGTCACTCCAGCCTTGTaGTTGTCATTCCTGGTAGAGGCACTGAAGGGTACT | + |
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Preference number: 6 (lower is better) Translates to: TSGSLGAVTPAL*LSFLVEALKGT Trigger: AGTACCCTTCAGTGCCTCTACCAGGAATGACAACCACAAGGCTGGAGTGACAGCTCCTAAGGAGCCACTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 72 bp | TACACAAGTGGCTCCTTAGGAGCTGTCACTCCAGCCTaGTGGTTGTCATTCCTGGTAGAGGCACTGAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: YTSGSLGAVTPA*WLSFLVEALKG Trigger: ACCCTTCAGTGCCTCTACCAGGAATGACAACCACAAGGCTGGAGTGACAGCTCCTAAGGAGCCACTTGTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS TCA 72 bp | TTTCAGCCATTGCCTCTGACACCTCAGTGTTGGTCCTaGCTTGCTTCTTTCCAAGGCTTGCTATGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: FQPLPLTPQCWS*LASFQGLLWQE Trigger: CTCCTGCCATAGCAAGCCTTGGAAAGAAGCAAGTCAGGACCAACACTGAGGTGTCAGAGGCAATGGCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS GCA 72 bp | CGAAAGCTCTCAGTGTCATCACAGGATCTCTGGGGCTaGTTCTACAGTGGGCAGTATTTGAGGCTTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: RKLSVSSQDLWG*FYSGQYLRLQL Trigger: AAGCTGAAGCCTCAAATACTGCCCACTGTAGAAGCAGCCCCAGAGATCCTGTGATGACACTGAGAGCTTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CCA 72 bp | TACTGGGTGGACACTGGATGCTACCGCTTCCTCTTCTaGAGGGTTCAAGCCCACACTGTAACCAAAATCTCT | + |
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Preference number: 6 (lower is better) Translates to: YWVDTGCYRFLF*RVQAHTVTKIS Trigger: AGAGATTTTGGTTACAGTGTGGGCTTGAACCCTCCAGAAGAGGAAGCGGTAGCATCCAGTGTCCACCCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CCA 72 bp | AGTGTCATCACAGGATCTCTGGGGCTGCTTCTACAGTaGGCAGTATTTGAGGCTTCAGCTTTCTGGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SVITGSLGLLLQ*AVFEASAFWSE Trigger: CTCAGACCAGAAAGCTGAAGCCTCAAATACTGCCCACTGTAGAAGCAGCCCCAGAGATCCTGTGATGACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS TCA 72 bp | CAACTCTCTCAATGCCTCGTTCTGGGTCAGACTTTCTaGTGCTGTGGAAGAAGCCTGCTTTCTTTCGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: QLSQCLVLGQTF*CCGRSLLSFEV Trigger: CACCTCGAAAGAAAGCAGGCTTCTTCCACAGCATCAGAAAGTCTGACCCAGAACGAGGCATTGAGAGAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 72 bp | GAGATGCCAGCAAGTCACTGTCTGCTGCACCCTTTCTaGAAGGAAGCACCTCATCCTCTAGTTTCCCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: EMPASHCLLHPF*KEAPHPLVSRF Trigger: AAAACGGGAAACTAGAGGATGAGGTGCTTCCTTCAAGAAAGGGTGCAGCAGACAGTGACTTGCTGGCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 72 bp | CAATCGAGATCCACCAACTCAGTTGTGAACTTCCCTTaGAGTGCAGGACTTGGCCAACTCTGTCTGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: QSRSTNSVVNFP*SAGLGQLCLSE Trigger: CTCAGACAGACAGAGTTGGCCAAGTCCTGCACTCAAAGGGAAGTTCACAACTGAGTTGGTGGATCTCGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 90 bp | TCTCGATCTAGTTTTGATGGTTCCTCTCCAGACAGGAAGAGCCTCTaGGTGGAATCTACCGTGGCAGATGAGAGTATAGGTTCCAGACCA | + |
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Preference number: 6 (lower is better) Translates to: SRSSFDGSSPDRKSL*VESTVADESIGSRP Trigger: TGGTCTGGAACCTATACTCTCATCTGCCACGGTAGATTCCACCAAGAGGCTCTTCCTGTCTGGAGAGGAACCATCAAAACTAGATCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS GCA 72 bp | TTCTGGGTCAGACTTTCTGATGCTGTGGAAGAAGCCTaGTTTCTTTCGAGGTGGAGTTTTCCAGAGCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: FWVRLSDAVEEA*FLSRWSFPELS Trigger: CGAAAGCTCTGGAAAACTCCACCTCGAAAGAAAGCAGGCTTCTTCCACAGCATCAGAAAGTCTGACCCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS GCA 72 bp | CATCCCCATCTAGAAATGCTCCCACGGAGATGGAGTTaGTGTACTTCTTTCCACTGCCAAAATCTGAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: HPHLEMLPRRWS*CTSFHCQNLRF Trigger: GAACCTCAGATTTTGGCAGTGGAAAGAAGTACAGCAACTCCATCTCCGTGGGAGCATTTCTAGATGGGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CCA 72 bp | ATCCTCATATACTGGACACACTCCATAGTACACAAGTaGCTCCTTAGGAGCTGTCACTCCAGCCTTGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: ILIYWTHSIVHK*LLRSCHSSLVV Trigger: AACCACAAGGCTGGAGTGACAGCTCCTAAGGAGCCACTTGTGTACTATGGAGTGTGTCCAGTATATGAGGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 72 bp | GGTGGAGTTTTCCAGAGCTTTCGAAAATCTTCTGCTTaGGATGGACTCAGAGGTCCCACGAAAGCTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: GGVFQSFRKSSA*DGLRGPTKALS Trigger: ACTGAGAGCTTTCGTGGGACCTCTGAGTCCATCCAAAGCAGAAGATTTTCGAAAGCTCTGGAAAACTCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 90 bp | TGGCACATGGAAGCCTGGTTCTCTTTGGCAGCAACATGCATGACATaGTACCTACATCCTTCTTGTACAATGGTTGGGTTGTCCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: WHMEAWFSLAATCMT*YLHPSCTMVGLSPE Trigger: TTCTGGGGACAACCCAACCATTGTACAAGAAGGATGTAGGTACAATGTCATGCATGTTGCTGCCAAAGAGAACCAGGCTTCCATGTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 90 bp | TCCAGAGTCTCTAATGTCAGCTGGCACATGGAAGCCTGGTTCTCTTaGGCAGCAACATGCATGACATTGTACCTACATCCTTCTTGTACA | + |
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Preference number: 6 (lower is better) Translates to: SRVSNVSWHMEAWFS*AATCMTLYLHPSCT Trigger: TGTACAAGAAGGATGTAGGTACAATGTCATGCATGTTGCTGCCAAAGAGAACCAGGCTTCCATGTGCCAGCTGACATTAGAGACTCTGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS TCA 72 bp | GATGGAGTTGCTGTACTTCTTTCCACTGCCAAAATCTaGGGTTCTGTCCTGAAGGCAGCCTTCATTTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: DGVAVLLSTAKI*GSVLKAAFIFS Trigger: CGAGAAAATGAAGGCTGCCTTCAGGACAGAACCTCAGATTTTGGCAGTGGAAAGAAGTACAGCAACTCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CCA 72 bp | TGTCATCATCCCCATCTAGAAATGCTCCCACGGAGATaGAGTTGCTGTACTTCTTTCCACTGCCAAAATCTG | + |
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Preference number: 6 (lower is better) Translates to: CHHPHLEMLPRR*SCCTSFHCQNL Trigger: CAGATTTTGGCAGTGGAAAGAAGTACAGCAACTCCATCTCCGTGGGAGCATTTCTAGATGGGGATGATGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 72 bp | TCTAATGTCAGCTGGCACATGGAAGCCTGGTTCTCTTaGGCAGCAACATGCATGACATTGTACCTACATCCT | + |
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Preference number: 6 (lower is better) Translates to: SNVSWHMEAWFS*AATCMTLYLHP Trigger: AGGATGTAGGTACAATGTCATGCATGTTGCTGCCAAAGAGAACCAGGCTTCCATGTGCCAGCTGACATTAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 72 bp | AAAGACATTTCAGCCATTGCCTCTGACACCTCAGTGTaGGTCCTGACTTGCTTCTTTCCAAGGCTTGCTATG | + |
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Preference number: 6 (lower is better) Translates to: KDISAIASDTSV*VLTCFFPRLAM Trigger: CATAGCAAGCCTTGGAAAGAAGCAAGTCAGGACCAACACTGAGGTGTCAGAGGCAATGGCTGAAATGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 72 bp | CACACTCAAGAGCTGCTAAAACATCTCGATCTAGTTTaGATGGTTCCTCTCCAGACAGGAAGAGCCTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: HTQELLKHLDLV*MVPLQTGRASW Trigger: CCAAGAGGCTCTTCCTGTCTGGAGAGGAACCATCAAAACTAGATCGAGATGTTTTAGCAGCTCTTGAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS TCA 72 bp | TCTCCCAGGCTTTGCAAATTCAGTTTATTCAACTCTTaGGTCAAAACAGAAACAGGTGGTGGAAGGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPRLCKFSLFNS*VKTETGGGRAS Trigger: GGAGGCCCTTCCACCACCTGTTTCTGTTTTGACTCAAGAGTTGAATAAACTGAATTTGCAAAGCCTGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
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| CDS GCA 72 bp | CAGTCCTGTGGTTTAGAGGGTGACAAAACCCATTTCTaGCTTTATCTGGGTAAGTTCCAACTGAGGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: QSCGLEGDKTHF*LYLGKFQLRFL Trigger: GAGAAACCTCAGTTGGAACTTACCCAGATAAAGGCAGAAATGGGTTTTGTCACCCTCTAAACCACAGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031474.11 ENSMUST00000197188.5 |
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| CDS TCA 72 bp | TTTGTAACTGTTTGCTCGTTCTTTGTTTACTGTTTCTaGTTCAGCCAGGCACAAGCCATCTTTCAGCCCATC | + |
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Preference number: 6 (lower is better) Translates to: FVTVCSFFVYCF*FSQAQAIFQPI Trigger: GATGGGCTGAAAGATGGCTTGTGCCTGGCTGAATCAGAAACAGTAAACAAAGAACGAGCAAACAGTTACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031474.11 |
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| CDS CCA 72 bp | AAGTCCAGCTTTCATAACTTCTTTTCTAAGGTCATCTaGATTCAAGAGTTTCAGTCGAGCCATCATGGCATC | + |
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Preference number: 6 (lower is better) Translates to: KSSFHNFFSKVI*IQEFQSSHHGI Trigger: GATGCCATGATGGCTCGACTGAAACTCTTGAATCCAGATGACCTTAGAAAAGAAGTTATGAAAGCTGGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 72 bp | ACATTGTACCTACATCCTTCTTGTACAATGGTTGGGTaGTCCCCAGAACCAATTAGATATCGAGGATTACTC | + |
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Preference number: 6 (lower is better) Translates to: TLYLHPSCTMVG*SPEPIRYRGLL Trigger: GAGTAATCCTCGATATCTAATTGGTTCTGGGGACAACCCAACCATTGTACAAGAAGGATGTAGGTACAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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| CDS CAA 72 bp | TCTTCTCTTGTTCGAAAAGCTTTAAACCGGGACCCTTaGATCAACTTGGCAGCTTGTAAAGCTTCCTTTTTA | + |
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Preference number: 6 (lower is better) Translates to: SSLVRKALNRDP*INLAACKASFL Trigger: TAAAAAGGAAGCTTTACAAGCTGCCAAGTTGATCAAAGGGTCCCGGTTTAAAGCTTTTCGAACAAGAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031474.11 ENSMUST00000086674.10 ENSMUST00000197188.5 |
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