Pregenerated sensors for ANKLE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046295Ensembl transcript IDs: ENSMUST00000119976.8, ENSMUST00000120725.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | ATGCTGGGATTAAAGGTGGTGCTCCAGAATAGCTTCTaGTCCTTGGCTTGTTTTCCTCCCGTGATGGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: MLGLKVVLQNSF*SLACFPPVMGS Trigger: GCTCCCCATCACGGGAGGAAAACAAGCCAAGGAGCAGAAGCTATTCTGGAGCACCACCTTTAATCCCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGCTGCAGGGCGCGCGGGTaGCTCGCTCTGGCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PARCSDTLMAQDSCHILSCRARG*LALAAR Trigger: CCTGGCAGCCAGAGCGAGCCACCCGCGCGCCCTGCA...GCTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | GAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCTGCAGGGCGCGCGGGTaGCTCGCTCTGGCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EPARCSDTLMAQDSCHILCRARG*LALAAR Trigger: CCTGGCAGCCAGAGCGAGCCACCCGCGCGCCCTGCA...GAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR GCA 90 bp | GGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTGTGGCTCGCTCTGGCTaGCAGGTGCACCGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GTSQMLRHLDGSGFMSHPVARSG*QVHRRS Trigger: GCTGCGGCGGTGCACCTGGCAGCCAGAGCGAGCCAC...AGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR GCA 90 bp | ACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGGTGGCTCGCTCTGGCTaGCAGGTGCACCGCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TSQMLRHLDGSGFMSHPQVARSG*QVHRRS Trigger: GCTGCGGCGGTGCACCTGGCAGCCAGAGCGAGCCAC...CTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGCGGCCTGAGCCCATCCTaGTCCCGCAGTGTGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PARCSDTLMAQDSCHILSGLSPS*SRSVGS Trigger: TGACCCCACACTGCGGGACCAGGATGGGCTCAGGCC...GCTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR TCA 90 bp | AGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGCATCCCAGTCCAAGGGCCTaGGCCCATCCTGGTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SQMLRHLDGSGFMSHPQHPSPRA*AHPGPA Trigger: TGCGGGACCAGGATGGGCTCAGGCCCTTGGACTGGG...ATGCTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR GCA 90 bp | TTAGGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCACGCGGCAGCCACATaGACAGGCGTCAGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGTSQMLRHLDGSGFMSHHAAAT*TGVSPS Trigger: GGAGGGGCTGACGCCTGTGCATGTGGCTGCCGCGTG...ATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | CAGTTAGGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACGGGTCTCATCAGGCTaGGTGGGCGTGTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: QLGTSQMLRHLDGSGFMSRVSSG*VGVSSS Trigger: GGAGCTGGACACGCCCACCCAGCCTGATGAGACCCG...TGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCCTAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | CAGTTAGGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACCTGCGGCTGGCAGTTaGGTGCTCCCTTCCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLGTSQMLRHLDGSGFMSPAAGS*VLPSQL Trigger: CAGCTGGGAAGGGAGCACCCAACTGCCAGCCGCAGG...TGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCCTAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | CTGTCCTTGAACTCACAGAGCTCTGTCTGCTATTGCCTCCTGAATGCTGGGATTTCAGCACGGCTAGCCTaGGCTTCCTGCAGCCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLNSQSSVCYCLLNAGISARLA*ASCSRR Trigger: ACGGCGGCTGCAGGAAGCCCAGGCTAGCCGTGCTGA...AATCCCAGCATTCAGGAGGCAATAGCAGACAGAGCTCTGTGAGTTCAAGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR CCA 90 bp | CAGTTAGGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCATCAGCACGGCTAGCCTaGGCTTCCTGCAGCCGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QLGTSQMLRHLDGSGFMSSARLA*ASCSRR Trigger: ACGGCGGCTGCAGGAAGCCCAGGCTAGCCGTGCTGA...TGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCCTAACTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | ACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGCCAGAGGTGGGCATCTaGTCGGGCTCGGGTTCCCTT | + |
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Preference number: 4 (lower is better) Translates to: TSQMLRHLDGSGFMSHPQPEVGI*SGSGSL Trigger: AAGGGAACCCGAGCCCGACCAGATGCCCACCTCTGG...CTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | ACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGAAGGCTTCCCAGAGGTaGGCATCTGGTCGGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TSQMLRHLDGSGFMSHPQKASQR*ASGRAR Trigger: CCGAGCCCGACCAGATGCCCACCTCTGGGAAGCCTT...CTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR TCA 90 bp | TTAGGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATGACACTCAGCCAGTGTaGGGGAAGAGGCTCGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LGTSQMLRHLDGSGFMSHDTQPV*GKRLGP Trigger: CGGCCCGAGCCTCTTCCCTCACACTGGCTGAGTGTC...ATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACACACACACAAGAAAACACACCACGCGGCAGCCACATaGACAGGCGTCAGCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTHKKTHHAAAT*TGVSPS Trigger: GGAGGGGCTGACGCCTGTGCATGTGGCTGCCGCGTG...GTGTGTTTTCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR CCA 90 bp | CAGTTAGGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACCAGAGGTGGGCATCTaGTCGGGCTCGGGTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QLGTSQMLRHLDGSGFMSPEVGI*SGSGSL Trigger: AAGGGAACCCGAGCCCGACCAGATGCCCACCTCTGG...TGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCCTAACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR GCA 90 bp | GGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTTCAGAGCTCTGGGGATaGACAGCCACCTCTACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTSQMLRHLDGSGFMSHPSELWG*TATSTA Trigger: GGCTGTAGAGGTGGCTGTGCATCCCCAGAGCTCTGA...AGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | GGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCCTGGCAGTCAGGGATaGTGCCTGTCCTTAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSQMLRHLDGSGFMSHPPGSQG*CLSLVP Trigger: AGGCACTAAGGACAGGCACCATCCCTGACTGCCAGG...AGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | TTAGGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATAAGGCTTCCCAGAGGTaGGCATCTGGTCGGGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTSQMLRHLDGSGFMSHKASQR*ASGRAR Trigger: CCGAGCCCGACCAGATGCCCACCTCTGGGAAGCCTT...ATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR TCA 90 bp | AATACTGTCACATATTTAAAAACACACACATACACGCACACACACGCGCGCACGGACACTCAGCCAGTGTaGGGGAAGAGGCTCGGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: NTVTYLKTHTYTHTHARTDTQPV*GKRLGP Trigger: CGGCCCGAGCCTCTTCCCTCACACTGGCTGAGTGTC...CGTGCGCGCGTGTGTGTGCGTGTATGTGTGTGTTTTTAAATATGTGACAGTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR GCA 90 bp | GTATATCCCCTGGCTGCACTGGAACTCATTTCTATAAACCAGGCTGTCCTTGAAGGCGTGTCCAGCTCCTaGAGCACTCGTGCGCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: VYPLAALELISINQAVLEGVSSS*STRAQL Trigger: CAACTGCGCACGAGTGCTGCAGGAGCTGGACACGCC...TTCAAGGACAGCCTGGTTTATAGAAATGAGTTCCAGTGCAGCCAGGGGATATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR GCA 90 bp | CTGTCCTTGAACTCACAGAGCTCTGTCTGCTATTGCCTCCTGAATGCTGGGATTTCAGAGCTCTGGGGATaGACAGCCACCTCTACAGCC | + |
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Preference number: 4 (lower is better) Translates to: LSLNSQSSVCYCLLNAGISELWG*TATSTA Trigger: GGCTGTAGAGGTGGCTGTGCATCCCCAGAGCTCTGA...AATCCCAGCATTCAGGAGGCAATAGCAGACAGAGCTCTGTGAGTTCAAGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR TCA 90 bp | CAGAAGCACCATGTATCCCAATGTTCACTCAGCTTGATTAAGAAATACTGTCACCCCAGTCCAAGGGCCTaGGCCCATCCTGGTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: QKHHVSQCSLSLIKKYCHPSPRA*AHPGPA Trigger: TGCGGGACCAGGATGGGCTCAGGCCCTTGGACTGGG...GTGACAGTATTTCTTAATCAAGCTGAGTGAACATTGGGATACATGGTGCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR GCA 90 bp | CAGTTAGGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCATCCATGGCCACCACATaGTGGAAGCAGTGCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: QLGTSQMLRHLDGSGFMSSMATT*WKQCRE Trigger: CTCTCTGCACTGCTTCCAGCATGTGGTGGCCATGGA...TGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCCTAACTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | ACACACACACACACACACACACACACACACACACACACACACAAGAAAACACACGTGGCCTCAGAGCTCTaGGGATGCACAGCCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTHKKTHVASEL*GCTATS Trigger: AGAGGTGGCTGTGCATCCCCAGAGCTCTGAGGCCAC...GTGTGTTTTCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR CCA 90 bp | ACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGAGATCCGGCGAACCTTaGGACAGACCTGTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TSQMLRHLDGSGFMSHPQRSGEP*DRPVSL Trigger: CAAGGAAACAGGTCTGTCCCAAGGTTCGCCGGATCT...CTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | GAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGATCCGGCGAACCTTaGGACAGACCTGTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: EPARCSDTLMAQDSCHILRSGEP*DRPVSL Trigger: CAAGGAAACAGGTCTGTCCCAAGGTTCGCCGGATCT...GAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| 3UTR CAA 72 bp | GGATTAAAGGTGGTGCTCCAGAATAGCTTCTGCTCCTaGGCTTGTTTTCCTCCCGTGATGGGGAGCTCACTA | + |
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Preference number: 4 (lower is better) Translates to: GLKVVLQNSFCS*ACFPPVMGSSL Trigger: TAGTGAGCTCCCCATCACGGGAGGAAAACAAGCCAAGGAGCAGAAGCTATTCTGGAGCACCACCTTTAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACACACACACACACACACACACAAGAAAACACACTCCATGGCCACCACATaGTGGAAGCAGTGCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTHTHTHTHKKTHSMATT*WKQCRE Trigger: CTCTCTGCACTGCTTCCAGCATGTGGTGGCCATGGA...GTGTGTTTTCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR CCA 90 bp | AATACTGTCACATATTTAAAAACACACACATACACGCACACACACGCGCGCACGCCTGGCAGTCAGGGATaGTGCCTGTCCTTAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: NTVTYLKTHTYTHTHARTPGSQG*CLSLVP Trigger: AGGCACTAAGGACAGGCACCATCCCTGACTGCCAGG...CGTGCGCGCGTGTGTGTGCGTGTATGTGTGTGTTTTTAAATATGTGACAGTATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR CCA 90 bp | ACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGACAGACCTGTTTCCTTaGCTGGTCATGGTAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TSQMLRHLDGSGFMSHPQTDLFP*LVMVAK Trigger: TTTGGCTACCATGACCAGCCAAGGAAACAGGTCTGT...CTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | CCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGCGCTAAGGCAGGTCCTTaGCATGTTTCAGTTTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: PARCSDTLMAQDSCHILSAKAGP*HVSVSK Trigger: CTTTGAAACTGAAACATGCCAAGGACCTGCCTTAGC...GCTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR GCA 90 bp | TTAGGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATTTTGTCCGTGTCCCTTaGAGTCAATGTCAGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: LGTSQMLRHLDGSGFMSHFVRVP*SQCQDL Trigger: CAGGTCCTGACATTGACTGCAAGGGACACGGACAAA...ATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CCA 90 bp | AAGCACCATGTATCCCAATGTTCACTCAGCTTGATTAAGAAATACTGTCACATACCTGCGGCTGGCAGTTaGGTGCTCCCTTCCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KHHVSQCSLSLIKKYCHIPAAGS*VLPSQL Trigger: CAGCTGGGAAGGGAGCACCCAACTGCCAGCCGCAGG...TATGTGACAGTATTTCTTAATCAAGCTGAGTGAACATTGGGATACATGGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR TCA 90 bp | TTAGGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATTGCAACTCCGAATCTTaGGAAACTCCAGAAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: LGTSQMLRHLDGSGFMSHCNSES*ETPEDS Trigger: AGAGTCTTCTGGAGTTTCTCAAGATTCGGAGTTGCA...ATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR GCA 90 bp | AATACTGTCACATATTTAAAAACACACACATACACGCACACACACGCGCGCACGTTTGTCCGTGTCCCTTaGAGTCAATGTCAGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: NTVTYLKTHTYTHTHARTFVRVP*SQCQDL Trigger: CAGGTCCTGACATTGACTGCAAGGGACACGGACAAA...CGTGCGCGCGTGTGTGTGCGTGTATGTGTGTGTTTTTAAATATGTGACAGTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR TCA 90 bp | AAGCACCATGTATCCCAATGTTCACTCAGCTTGATTAAGAAATACTGTCACATAATCGCTGCTGTAGTCTaGGTTCTCGGTGGCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: KHHVSQCSLSLIKKYCHIIAAVV*VLGGLR Trigger: TCTGAGGCCACCGAGAACTCAGACTACAGCAGCGAT...TATGTGACAGTATTTCTTAATCAAGCTGAGTGAACATTGGGATACATGGTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR CCA 90 bp | CAGAAGCACCATGTATCCCAATGTTCACTCAGCTTGATTAAGAAATACTGTCACACAGACCTGTTTCCTTaGCTGGTCATGGTAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: QKHHVSQCSLSLIKKYCHTDLFP*LVMVAK Trigger: TTTGGCTACCATGACCAGCCAAGGAAACAGGTCTGT...GTGACAGTATTTCTTAATCAAGCTGAGTGAACATTGGGATACATGGTGCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR TCA 90 bp | CAGAAGCACCATGTATCCCAATGTTCACTCAGCTTGATTAAGAAATACTGTCACTGCAACTCCGAATCTTaGGAAACTCCAGAAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: QKHHVSQCSLSLIKKYCHCNSES*ETPEDS Trigger: AGAGTCTTCTGGAGTTTCTCAAGATTCGGAGTTGCA...GTGACAGTATTTCTTAATCAAGCTGAGTGAACATTGGGATACATGGTGCTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS CCA 90 bp | CGGCAGCCACATGCACAGGCGTCAGCCCCTCCGCGGACCGAGCATTaGGATCCGCTCCCCAGCGCAGCAGCATCCGAAGGCAATGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RQPHAQASAPPRTEH*DPLPSAAASEGNAG Trigger: CCCTGCATTGCCTTCGGATGCTGCTGCGCTGGGGAGCGGATCCCAATGCTCGGTCCGCGGAGGGGCTGACGCCTGTGCATGTGGCTGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS GCA 90 bp | AGCAGCAACTCCAGAGCACCACAACAGCCCCACGCGGCAGCCACATaGACAGGCGTCAGCCCCTCCGCGGACCGAGCATTGGGATCCGCT | + |
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Preference number: 5 (lower is better) Translates to: SSNSRAPQQPHAAAT*TGVSPSADRALGSA Trigger: AGCGGATCCCAATGCTCGGTCCGCGGAGGGGCTGACGCCTGTGCATGTGGCTGCCGCGTGGGGCTGTTGTGGTGCTCTGGAGTTGCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS GCA 90 bp | CTCTCCCCCTCAGCCAGGAAGACCAGCAGAGCACGCTGTAGCAGGTaGACCCCCAAACGCCGACGCCGAGAGGGTGGCCAATGGGCAACC | + |
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Preference number: 5 (lower is better) Translates to: LSPSARKTSRARCSR*TPKRRRREGGQWAT Trigger: GGTTGCCCATTGGCCACCCTCTCGGCGTCGGCGTTTGGGGGTGCACCTGCTACAGCGTGCTCTGCTGGTCTTCCTGGCTGAGGGGGAGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS GCA 90 bp | GGCAGTACGGGTTTGTCCGTGTCCCTTGCAGTCAATGTCAGGACCTaGGGCTGGCAGTTGGGTGCTCCCTTCCCAGCTGACACAGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: GSTGLSVSLAVNVRT*GWQLGAPFPADTAP Trigger: TGGGGCTGTGTCAGCTGGGAAGGGAGCACCCAACTGCCAGCCGCAGGTCCTGACATTGACTGCAAGGGACACGGACAAACCCGTACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CCA 90 bp | CTCCAGAAGACTCTGCTGTGGGTTCTCGGGTCTCATCAGGCTGGGTaGGCGTGTCCAGCTCCTGCAGCACTCGTGCGCAGTTGTGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: LQKTLLWVLGSHQAG*ACPAPAALVRSCGV Trigger: GACACCACAACTGCGCACGAGTGCTGCAGGAGCTGGACACGCCCACCCAGCCTGATGAGACCCGAGAACCCACAGCAGAGTCTTCTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120725.2 |
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| CDS CCA 90 bp | ACGGGTTTGTCCGTGTCCCTTGCAGTCAATGTCAGGACCTGCGGCTaGCAGTTGGGTGCTCCCTTCCCAGCTGACACAGCCCCACGGGTT | + |
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Preference number: 5 (lower is better) Translates to: TGLSVSLAVNVRTCG*QLGAPFPADTAPRV Trigger: AACCCGTGGGGCTGTGTCAGCTGGGAAGGGAGCACCCAACTGCCAGCCGCAGGTCCTGACATTGACTGCAAGGGACACGGACAAACCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CCA 90 bp | CCTTGGCTGGTCATGGTAGCCAAAGGCTTCCCAGAGGTGGGCATCTaGTCGGGCTCGGGTTCCCTTGCCCACATAGAAGATGGCTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PWLVMVAKGFPEVGI*SGSGSLAHIEDGSH Trigger: GTGAGAGCCATCTTCTATGTGGGCAAGGGAACCCGAGCCCGACCAGATGCCCACCTCTGGGAAGCCTTTGGCTACCATGACCAGCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS TCA 90 bp | CATAGAAGATGGCTCTCACGAAACATTGCAGACACTCAGCCAGTGTaGGGGAAGAGGCTCGGGCCGGCAGGTCCTTCGTCAGCCTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: HRRWLSRNIADTQPV*GKRLGPAGPSSAWG Trigger: ACCCCAGGCTGACGAAGGACCTGCCGGCCCGAGCCTCTTCCCTCACACTGGCTGAGTGTCTGCAATGTTTCGTGAGAGCCATCTTCTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS GCA 90 bp | GCTTCCCGAGTGTACGCTTCCATGGCCACCACATGCTGGAAGCAGTaGAGAGAGATGATGCCCCGGCCACTAGCCCAGATGTCTAAGATC | + |
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Preference number: 5 (lower is better) Translates to: ASRVYASMATTCWKQ*REMMPRPLAQMSKI Trigger: GATCTTAGACATCTGGGCTAGTGGCCGGGGCATCATCTCTCTGCACTGCTTCCAGCATGTGGTGGCCATGGAAGCGTACACTCGGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CCA 90 bp | GCACGTGCAACTCCGAATCTTGAGAAACTCCAGAAGACTCTGCTGTaGGTTCTCGGGTCTCATCAGGCTGGGTGGGCGTGTCCAGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: ARATPNLEKLQKTLL*VLGSHQAGWACPAP Trigger: AGGAGCTGGACACGCCCACCCAGCCTGATGAGACCCGAGAACCCACAGCAGAGTCTTCTGGAGTTTCTCAAGATTCGGAGTTGCACGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120725.2 |
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| CDS GCA 90 bp | CAAAGGCTTCCCAGAGGTGGGCATCTGGTCGGGCTCGGGTTCCCTTaGCCACATAGAAGATGGCTCTCACGAAACATTGCAGACACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRLPRGGHLVGLGFP*PHRRWLSRNIADTQ Trigger: CTGAGTGTCTGCAATGTTTCGTGAGAGCCATCTTCTATGTGGGCAAGGGAACCCGAGCCCGACCAGATGCCCACCTCTGGGAAGCCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS TCA 90 bp | GCAGGTCCTTGGCATGTTTCAGTTTCAAAGCTACCCTGGGCTACATaGAACGTCTCTGTGGGTTCTCGGGTCTCATCAGGCTGGGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: AGPWHVSVSKLPWAT*NVSVGSRVSSGWVG Trigger: GCCCACCCAGCCTGATGAGACCCGAGAACCCACAGAGACGTTTCATGTAGCCCAGGGTAGCTTTGAAACTGAAACATGCCAAGGACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS GCA 90 bp | TCTATGCACGTGCAACTCCGAATCTTGAGAAACTCCAGAAGACTCTaGTGTGGGTTCTCGGGTCTCATCAGGCTGGGTGGGCGTGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SMHVQLRILRNSRRL*CGFSGLIRLGGRVQ Trigger: CTGGACACGCCCACCCAGCCTGATGAGACCCGAGAACCCACAGCAGAGTCTTCTGGAGTTTCTCAAGATTCGGAGTTGCACGTGCATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120725.2 |
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| CDS CCA 90 bp | GTGGCCAATGGGCAACCACTCCATAGTAGTGCCCTTGTTTCTGGTTaGTCAGTGTCTGGAGACCTAGGGCATCCAACAGACAGGCTTCCC | + |
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Preference number: 5 (lower is better) Translates to: VANGQPLHSSALVSG*SVSGDLGHPTDRLP Trigger: GGGAAGCCTGTCTGTTGGATGCCCTAGGTCTCCAGACACTGACCAACCAGAAACAAGGGCACTACTATGGAGTGGTTGCCCATTGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CCA 90 bp | ATGTTTCAGTTTCAAAGCTACCCTGGGCTACATGAAACGTCTCTGTaGGTTCTCGGGTCTCATCAGGCTGGGTGGGCGTGTCCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: MFQFQSYPGLHETSL*VLGSHQAGWACPAP Trigger: AGGAGCTGGACACGCCCACCCAGCCTGATGAGACCCGAGAACCCACAGAGACGTTTCATGTAGCCCAGGGTAGCTTTGAAACTGAAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR CAA 90 bp | CCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGCTGCCCTTGTTTCTGGTaGGTCAGTGTCTGGAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: PARCSDTLMAQDSCHILSCPCFW*VSVWRP Trigger: AGGTCTCCAGACACTGACCAACCAGAAACAAGGGCA...GCTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CAA 90 bp | ACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGGGCTCTCACGAAACATaGCAGACACTCAGCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSQMLRHLDGSGFMSHPQGSHET*QTLSQC Trigger: ACACTGGCTGAGTGTCTGCAATGTTTCGTGAGAGCC...CTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CAA 90 bp | AGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGCATGTTTGTCCGTGTCCCTaGCAGTCAATGTCAGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: SQMLRHLDGSGFMSHPQHVCPCP*QSMSGP Trigger: AGGTCCTGACATTGACTGCAAGGGACACGGACAAAC...ATGCTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CAA 90 bp | TTAGGAACCAGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATGTTTGTCCGTGTCCCTaGCAGTCAATGTCAGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: LGTSQMLRHLDGSGFMSHVCPCP*QSMSGP Trigger: AGGTCCTGACATTGACTGCAAGGGACACGGACAAAC...ATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCTGGTTCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CAA 90 bp | TGTCACATATTTAAAAACACACACATACACGCACACACACGCGCGCACGCACACGGCTCTCACGAAACATaGCAGACACTCAGCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CHIFKNTHIHAHTRAHAHGSHET*QTLSQC Trigger: ACACTGGCTGAGTGTCTGCAATGTTTCGTGAGAGCC...GTGTGCGTGCGCGCGTGTGTGTGCGTGTATGTGTGTGTTTTTAAATATGTGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR CAA 90 bp | AGCCAGATGCTCAGACACCTTGATGGCTCAGGATTCATGTCACATCCTCAGCATGTGCAACTCCGAATCTaGAGAAACTCCAGAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: SQMLRHLDGSGFMSHPQHVQLRI*RNSRRL Trigger: GAGTCTTCTGGAGTTTCTCAAGATTCGGAGTTGCAC...ATGCTGAGGATGTGACATGAATCCTGAGCCATCAAGGTGTCTGAGCATCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS-3UTR CAA 90 bp | AAGCACCATGTATCCCAATGTTCACTCAGCTTGATTAAGAAATACTGTCACATACCAGGCAGTACGGGTTaGTCCGTGTCCCTTGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KHHVSQCSLSLIKKYCHIPGSTG*SVSLAV Trigger: GACTGCAAGGGACACGGACAAACCCGTACTGCCTGG...TATGTGACAGTATTTCTTAATCAAGCTGAGTGAACATTGGGATACATGGTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR CAA 90 bp | AATACTGTCACATATTTAAAAACACACACATACACGCACACACACGCGCGCACGGTGCAACTCCGAATCTaGAGAAACTCCAGAAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: NTVTYLKTHTYTHTHARTVQLRI*RNSRRL Trigger: GAGTCTTCTGGAGTTTCTCAAGATTCGGAGTTGCAC...CGTGCGCGCGTGTGTGTGCGTGTATGTGTGTGTTTTTAAATATGTGACAGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGCACCATGTATCCCAATGTTCACTCAGCTTGATTAAGAAATACTGTCACTGCCCTTGTTTCTGGTaGGTCAGTGTCTGGAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: QKHHVSQCSLSLIKKYCHCPCFW*VSVWRP Trigger: AGGTCTCCAGACACTGACCAACCAGAAACAAGGGCA...GTGACAGTATTTCTTAATCAAGCTGAGTGAACATTGGGATACATGGTGCTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS CCA 72 bp | CGCAGCAGCATCCGAAGGCAATGCAGGGCGCGCGGGTaGCTCGCTCTGGCTGCCAGGTGCACCGCCGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RSSIRRQCRARG*LALAARCTAAA Trigger: CGCTGCGGCGGTGCACCTGGCAGCCAGAGCGAGCCACCCGCGCGCCCTGCATTGCCTTCGGATGCTGCTGCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CCA 72 bp | CATGCACAGGCGTCAGCCCCTCCGCGGACCGAGCATTaGGATCCGCTCCCCAGCGCAGCAGCATCCGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: HAQASAPPRTEH*DPLPSAAASEG Trigger: GCCTTCGGATGCTGCTGCGCTGGGGAGCGGATCCCAATGCTCGGTCCGCGGAGGGGCTGACGCCTGTGCATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS GCA 72 bp | TCCAGAGCACCACAACAGCCCCACGCGGCAGCCACATaGACAGGCGTCAGCCCCTCCGCGGACCGAGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: SRAPQQPHAAAT*TGVSPSADRAL Trigger: CAATGCTCGGTCCGCGGAGGGGCTGACGCCTGTGCATGTGGCTGCCGCGTGGGGCTGTTGTGGTGCTCTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CAA 72 bp | ACATGCACAGGCGTCAGCCCCTCCGCGGACCGAGCATaGGGATCCGCTCCCCAGCGCAGCAGCATCCGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TCTGVSPSADRA*GSAPQRSSIRR Trigger: CCTTCGGATGCTGCTGCGCTGGGGAGCGGATCCCAATGCTCGGTCCGCGGAGGGGCTGACGCCTGTGCATGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CCA 72 bp | TGCTGTAGTGCCCAGTCCAAGGGCCTGAGCCCATCCTaGTCCCGCAGTGTGGGGTCACCTCCTCGGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CCSAQSKGLSPS*SRSVGSPPRLS Trigger: GCTGAGCCGAGGAGGTGACCCCACACTGCGGGACCAGGATGGGCTCAGGCCCTTGGACTGGGCACTACAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS GCA 72 bp | CGGGTCTCATCAGGCTGGGTGGGCGTGTCCAGCTCCTaGAGCACTCGTGCGCAGTTGTGGTGTCGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RVSSGWVGVSSS*STRAQLWCRCC Trigger: ACAGCAGCGACACCACAACTGCGCACGAGTGCTGCAGGAGCTGGACACGCCCACCCAGCCTGATGAGACCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS GCA 72 bp | TCAGCCAGGAAGACCAGCAGAGCACGCTGTAGCAGGTaGACCCCCAAACGCCGACGCCGAGAGGGTGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SARKTSRARCSR*TPKRRRREGGQ Trigger: TTGGCCACCCTCTCGGCGTCGGCGTTTGGGGGTGCACCTGCTACAGCGTGCTCTGCTGGTCTTCCTGGCTGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CCA 72 bp | GGCGTGTCCAGCTCCTGCAGCACTCGTGCGCAGTTGTaGTGTCGCTGCTGTAGTGCCCAGTCCAAGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVSSSCSTRAQL*CRCCSAQSKGL Trigger: CAGGCCCTTGGACTGGGCACTACAGCAGCGACACCACAACTGCGCACGAGTGCTGCAGGAGCTGGACACGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CCA 72 bp | CCCTTGCAGTCAATGTCAGGACCTGCGGCTGGCAGTTaGGTGCTCCCTTCCCAGCTGACACAGCCCCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLQSMSGPAAGS*VLPSQLTQPHG Trigger: CCCGTGGGGCTGTGTCAGCTGGGAAGGGAGCACCCAACTGCCAGCCGCAGGTCCTGACATTGACTGCAAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CAA 72 bp | TCCCTTGCAGTCAATGTCAGGACCTGCGGCTGGCAGTaGGGTGCTCCCTTCCCAGCTGACACAGCCCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SLAVNVRTCGWQ*GAPFPADTAPR Trigger: CCGTGGGGCTGTGTCAGCTGGGAAGGGAGCACCCAACTGCCAGCCGCAGGTCCTGACATTGACTGCAAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CAA 90 bp | TTGTCCGTGTCCCTTGCAGTCAATGTCAGGACCTGCGGCTGGCAGTaGGGTGCTCCCTTCCCAGCTGACACAGCCCCACGGGTTACCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSVSLAVNVRTCGWQ*GAPFPADTAPRVTH Trigger: GTGGGTAACCCGTGGGGCTGTGTCAGCTGGGAAGGGAGCACCCAACTGCCAGCCGCAGGTCCTGACATTGACTGCAAGGGACACGGACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CCA 72 bp | TCCGTGTCCCTTGCAGTCAATGTCAGGACCTGCGGCTaGCAGTTGGGTGCTCCCTTCCCAGCTGACACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVSLAVNVRTCG*QLGAPFPADTA Trigger: GGCTGTGTCAGCTGGGAAGGGAGCACCCAACTGCCAGCCGCAGGTCCTGACATTGACTGCAAGGGACACGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS GCA 72 bp | CCCATCACCAGGCAGTACGGGTTTGTCCGTGTCCCTTaGAGTCAATGTCAGGACCTGCGGCTGGCAGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PITRQYGFVRVP*SQCQDLRLAVG Trigger: CCCAACTGCCAGCCGCAGGTCCTGACATTGACTGCAAGGGACACGGACAAACCCGTACTGCCTGGTGATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CAA 90 bp | GGCTCGGGTTCCCTTGCCCACATAGAAGATGGCTCTCACGAAACATaGCAGACACTCAGCCAGTGTGAGGGAAGAGGCTCGGGCCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSGSLAHIEDGSHET*QTLSQCEGRGSGRQ Trigger: CTGCCGGCCCGAGCCTCTTCCCTCACACTGGCTGAGTGTCTGCAATGTTTCGTGAGAGCCATCTTCTATGTGGGCAAGGGAACCCGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS TCA 72 bp | TGGCTCTCACGAAACATTGCAGACACTCAGCCAGTGTaGGGGAAGAGGCTCGGGCCGGCAGGTCCTTCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: WLSRNIADTQPV*GKRLGPAGPSS Trigger: TGACGAAGGACCTGCCGGCCCGAGCCTCTTCCCTCACACTGGCTGAGTGTCTGCAATGTTTCGTGAGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS GCA 72 bp | GTGTACGCTTCCATGGCCACCACATGCTGGAAGCAGTaGAGAGAGATGATGCCCCGGCCACTAGCCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: VYASMATTCWKQ*REMMPRPLAQM Trigger: CATCTGGGCTAGTGGCCGGGGCATCATCTCTCTGCACTGCTTCCAGCATGTGGTGGCCATGGAAGCGTACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS GCA 72 bp | CCCAGAGGTGGGCATCTGGTCGGGCTCGGGTTCCCTTaGCCACATAGAAGATGGCTCTCACGAAACATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PRGGHLVGLGFP*PHRRWLSRNIA Trigger: TGCAATGTTTCGTGAGAGCCATCTTCTATGTGGGCAAGGGAACCCGAGCCCGACCAGATGCCCACCTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CAA 72 bp | AAAGCCCCCAGATCCCCATCACCAGGCAGTACGGGTTaGTCCGTGTCCCTTGCAGTCAATGTCAGGACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KAPRSPSPGSTG*SVSLAVNVRTC Trigger: GCAGGTCCTGACATTGACTGCAAGGGACACGGACAAACCCGTACTGCCTGGTGATGGGGATCTGGGGGCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS TCA 72 bp | CACTGCAGTGACAAACGAAGCATCGCTGCTGTAGTCTaGGTTCTCGGTGGCCTCAGAGCTCTGGGGATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HCSDKRSIAAVV*VLGGLRALGMH Trigger: GTGCATCCCCAGAGCTCTGAGGCCACCGAGAACTCAGACTACAGCAGCGATGCTTCGTTTGTCACTGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CCA 72 bp | CAAACGAAGCATCGCTGCTGTAGTCTGAGTTCTCGGTaGCCTCAGAGCTCTGGGGATGCACAGCCACCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: QTKHRCCSLSSR*PQSSGDAQPPL Trigger: TAGAGGTGGCTGTGCATCCCCAGAGCTCTGAGGCCACCGAGAACTCAGACTACAGCAGCGATGCTTCGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS CCA 72 bp | CTGGTCGGGCTCGGGTTCCCTTGCCCACATAGAAGATaGCTCTCACGAAACATTGCAGACACTCAGCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVGLGFPCPHRR*LSRNIADTQPV Trigger: CACTGGCTGAGTGTCTGCAATGTTTCGTGAGAGCCATCTTCTATGTGGGCAAGGGAACCCGAGCCCGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS GCA 72 bp | GTGCAACTCCGAATCTTGAGAAACTCCAGAAGACTCTaGTGTGGGTTCTCGGGTCTCATCAGGCTGGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VQLRILRNSRRL*CGFSGLIRLGG Trigger: CCCACCCAGCCTGATGAGACCCGAGAACCCACAGCAGAGTCTTCTGGAGTTTCTCAAGATTCGGAGTTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120725.2 |
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| CDS CCA 72 bp | ACTCCGAATCTTGAGAAACTCCAGAAGACTCTGCTGTaGGTTCTCGGGTCTCATCAGGCTGGGTGGGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TPNLEKLQKTLL*VLGSHQAGWAC Trigger: ACACGCCCACCCAGCCTGATGAGACCCGAGAACCCACAGCAGAGTCTTCTGGAGTTTCTCAAGATTCGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120725.2 |
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| CDS CCA 72 bp | GGGCAACCACTCCATAGTAGTGCCCTTGTTTCTGGTTaGTCAGTGTCTGGAGACCTAGGGCATCCAACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: GQPLHSSALVSG*SVSGDLGHPTD Trigger: GTCTGTTGGATGCCCTAGGTCTCCAGACACTGACCAACCAGAAACAAGGGCACTACTATGGAGTGGTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119976.8 ENSMUST00000120725.2 |
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| CDS TCA 72 bp | TCCAGCTCAGCTCTATGCACGTGCAACTCCGAATCTTaGGAAACTCCAGAAGACTCTGCTGTGGGTTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSALCTCNSES*ETPEDSAVGSR Trigger: CCGAGAACCCACAGCAGAGTCTTCTGGAGTTTCTCAAGATTCGGAGTTGCACGTGCATAGAGCTGAGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120725.2 |
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| CDS TCA 72 bp | TGGCATGTTTCAGTTTCAAAGCTACCCTGGGCTACATaGAACGTCTCTGTGGGTTCTCGGGTCTCATCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: WHVSVSKLPWAT*NVSVGSRVSSG Trigger: GCCTGATGAGACCCGAGAACCCACAGAGACGTTTCATGTAGCCCAGGGTAGCTTTGAAACTGAAACATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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| CDS TCA 72 bp | TCCAGCTCAGCTCTATGCACGTGCAACTCCGAATCTTaGGAAACTCCAGAAGACTCTGCTAAGGCAGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSALCTCNSES*ETPEDSAKAGP Trigger: AGGACCTGCCTTAGCAGAGTCTTCTGGAGTTTCTCAAGATTCGGAGTTGCACGTGCATAGAGCTGAGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119976.8 |
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