Pregenerated sensors for ANKEF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074771Ensembl transcript IDs: ENSMUST00000028726.9, ENSMUST00000121717.2, ENSMUST00000123214.8, ENSMUST00000149712.8, ENSMUST00000180246.8
Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACATTCTGGTAGGTCTCAATCATGTAGTAGGGCGGGCCCCCATCTaGCCGCCGCGGGAAGGCGTTCTCCGGGATGGTGCAGATGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: DILVGLNHVVGRAPI*PPREGVLRDGADGE Trigger: CTCCCCATCTGCACCATCCCGGAGAACGCCTTCCCGCGGCGGCCAGATGGGGGCCCGCCCTACTACATGATTGAGACCTACCAGAATGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR TCA 90 bp | ACTCGGAATCATCCTGGATTGGGTGCTCGGGCGGGTGGTCCCGGTTaGACCTGTGGCTGTCGGAGACATTCTGGTAGGTCTCAATCATGT | + |
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Preference number: 1 (lower is better) Translates to: TRNHPGLGARAGGPG*TCGCRRHSGRSQSC Trigger: ACATGATTGAGACCTACCAGAATGTCTCCGACAGCCACAGGTTCAACCGGGACCACCCGCCCGAGCACCCAATCCAGGATGATTCCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR TCA 90 bp | TCTTCACTGTGTGATCATCTTGGTGGGCCACCGTCTGTGCACCCATaGTGCCATGCCCTCCTTTGCCTCCATCCTCTTTTCAGATCCTTT | + |
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Preference number: 1 (lower is better) Translates to: SSLCDHLGGPPSVHP*CHALLCLHPLFRSF Trigger: AAAGGATCTGAAAAGAGGATGGAGGCAAAGGAGGGCATGGCATCATGGGTGCACAGACGGTGGCCCACCAAGATGATCACACAGTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR CCA 90 bp | ATGATGCCATGCCCTCCTTTGCCTCCATCCTCTTTTCAGATCCTTTaGGCTGTCCACTGCAAAGGGACCAACAAACACCAAACCCGAAAC | + |
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Preference number: 1 (lower is better) Translates to: MMPCPPLPPSSFQIL*AVHCKGTNKHQTRN Trigger: GTTTCGGGTTTGGTGTTTGTTGGTCCCTTTGCAGTGGACAGCCCAAAGGATCTGAAAAGAGGATGGAGGCAAAGGAGGGCATGGCATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR CCA 90 bp | ATCTCTATAGATCAAGTCACCTCTCTGGAGATGGACTTTAGGAAATaGAGAGGTAGGCATGCTTTCTGTCACCGTGGGAGTCCTTCTTGT | + |
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Preference number: 1 (lower is better) Translates to: ISIDQVTSLEMDFRK*RGRHAFCHRGSPSC Trigger: ACAAGAAGGACTCCCACGGTGACAGAAAGCATGCCTACCTCTCCATTTCCTAAAGTCCATCTCCAGAGAGGTGACTTGATCTATAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR GCA 90 bp | GGGTATTCCTGTTTCGATGGCCTTTTTCAGAGAGGCCAGATCTCCTaGTTTGGTGATAAAACTAATATTTGCGAAGACCCTACTCGGATC | + |
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Preference number: 1 (lower is better) Translates to: GYSCFDGLFQRGQIS*FGDKTNICEDPTRI Trigger: GATCCGAGTAGGGTCTTCGCAAATATTAGTTTTATCACCAAAGCAGGAGATCTGGCCTCTCTGAAAAAGGCCATCGAAACAGGAATACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR GCA 90 bp | GTCTATCATTGTCATATGCGTTCACTTCACCTCCTCTTTCCAATATaGCACGAACTATTTCCAGCACCCCTTCTCTTGACGATTCCATCA | + |
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Preference number: 1 (lower is better) Translates to: VYHCHMRSLHLLFPI*HELFPAPLLLTIPS Trigger: TGATGGAATCGTCAAGAGAAGGGGTGCTGGAAATAGTTCGTGGCATATTGGAAAGAGGAGGTGAAGTGAACGCATATGACAATGATAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR GCA 90 bp | TCCTTTGGCAGCAAAATGAGCAGCGTGGTGTCTATCATTGTCATATaGGTTCACTTCACCTCCTCTTTCCAATATGCCACGAACTATTTC | + |
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Preference number: 1 (lower is better) Translates to: SFGSKMSSVVSIIVI*VHFTSSFQYATNYF Trigger: GAAATAGTTCGTGGCATATTGGAAAGAGGAGGTGAAGTGAACGCATATGACAATGATAGACACCACGCTGCTCATTTTGCTGCCAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR TCA 90 bp | TGTGCTGATAAAAGCATTGCATATTTTAAGTCGTTTATTCATCAGTaGATTTGGAGCTGGGTCCTATTAGAGCCTATTGCACACTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: CADKSIAYFKSFIHQ*IWSWVLLEPIAHLG Trigger: CCCCAAGTGTGCAATAGGCTCTAATAGGACCCAGCTCCAAATTCACTGATGAATAAACGACTTAAAATATGCAATGCTTTTATCAGCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR GCA 90 bp | TGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTaGTTTGGCTTTGATGGAAATACGTACTTTCTCCAAACTTTGACT | + |
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Preference number: 1 (lower is better) Translates to: CCKNWPLITNSQWVN*FGFDGNTYFLQTLT Trigger: AGTCAAAGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
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| 3UTR-3UTR TCA 90 bp | GCCGCCGCGGGAAGGCGTTCTCCGGGATGGTGCAGATGGGGAGAGGCAAAACAAGGAAAGCAACTGCTCTaGGGTGGCATACTCTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: AAAGRRSPGWCRWGEAKQGKQLL*GGILLP Trigger: AGGCAAGAGTATGCCACCTCAGAGCAGTTGCTTTCC...TTGTTTTGCCTCTCCCCATCTGCACCATCCCGGAGAACGCCTTCCCGCGGCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR CAA 90 bp | GTGGCATACTCTTGCCTCTCCTCCAGGGCCACCACGAAGTCATCTTaGCTGACTACGCCATCGCCCCTGTCCACGAACTTAAAGGCGTTC | + |
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Preference number: 2 (lower is better) Translates to: VAYSCLSSRATTKSS*LTTPSPLSTNLKAF Trigger: GAACGCCTTTAAGTTCGTGGACAGGGGCGATGGCGTAGTCAGCAAAGATGACTTCGTGGTGGCCCTGGAGGAGAGGCAAGAGTATGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCCACTGCAAAGGGACCAACAAACACCAAACCCGAAACCTGAAACCCAAAACGAGGTGGCATACTCTTaGCTCTCCTCCAGGGCCACC | + |
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Preference number: 2 (lower is better) Translates to: CPLQRDQQTPNPKPETQNEVAYS*LSSRAT Trigger: GGTGGCCCTGGAGGAGAGGCAAGAGTATGCCACCTC...GTTTTGGGTTTCAGGTTTCGGGTTTGGTGTTTGTTGGTCCCTTTGCAGTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTCCACTGCAAAGGGACCAACAAACACCAAACCCGAAACCTGAAACCCAACGTTCTCCGGGATGGTaGAGATGGGGAGAGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: GCPLQRDQQTPNPKPETQRSPGW*RWGEAK Trigger: TTTTGCCTCTCCCCATCTGCACCATCCCGGAGAACG...TTGGGTTTCAGGTTTCGGGTTTGGTGTTTGTTGGTCCCTTTGCAGTGGACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR CAA 90 bp | CATGATGCCATGCCCTCCTTTGCCTCCATCCTCTTTTCAGATCCTTaGGGCTGTCCACTGCAAAGGGACCAACAAACACCAAACCCGAAA | + |
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Preference number: 2 (lower is better) Translates to: HDAMPSFASILFSDP*GCPLQRDQQTPNPK Trigger: TTTCGGGTTTGGTGTTTGTTGGTCCCTTTGCAGTGGACAGCCCAAAGGATCTGAAAAGAGGATGGAGGCAAAGGAGGGCATGGCATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTTCATATCCACGGGTATTCCTGTTTCGATGGCCTTTTTCAGAGAGGCCAGCAACTGCTCTGAGGTaGCATACTCTTGCCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: CPSYPRVFLFRWPFSERPATALR*HTLASP Trigger: AGGAGAGGCAAGAGTATGCCACCTCAGAGCAGTTGC...TGGCCTCTCTGAAAAAGGCCATCGAAACAGGAATACCCGTGGATATGAAGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCCTTCATATCCACGGGTATTCCTGTTTCGATGGCCTTTTTCAGAGAGGCCAGCAACGGAAAGCAACTaGTCTGAGGTGGCATACTCT | + |
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Preference number: 2 (lower is better) Translates to: CPSYPRVFLFRWPFSERPATESN*SEVAYS Trigger: AGAGTATGCCACCTCAGAGCAGTTGCTTTCCGTTGC...TGGCCTCTCTGAAAAAGGCCATCGAAACAGGAATACCCGTGGATATGAAGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTTCATATCCACGGGTATTCCTGTTTCGATGGCCTTTTTCAGAGAGGCCAGGCAGCAAAGTGAAGTaGTGTGTTCCCATCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: CPSYPRVFLFRWPFSERPGSKVK*CVPIHS Trigger: GGAATGGATGGGAACACACCACTTCACTTTGCTGCC...TGGCCTCTCTGAAAAAGGCCATCGAAACAGGAATACCCGTGGATATGAAGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR GCA 90 bp | GGCCCGAAAGATCCCAATACGTACGACTTGCTTAAATATTTGGTTCCCTTAAAGTCTATGGACCAGTCATaGAGCCTGAGGGCCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: GPKDPNTYDLLKYLVPLKSMDQS*SLRAQR Trigger: TCTCTGGGCCCTCAGGCTGCATGACTGGTCCATAGA...CTTTAAGGGAACCAAATATTTAAGCAAGTCGTACGTATTGGGATCTTTCGGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCCATAAAAGAGGCCAATTAAAATATTACTCCACACCATCTTATCATCTAAGGCGTTCTCCGGGATaGTGCAGATGGGGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: VLHKRGQLKYYSTPSYHLRRSPG*CRWGEA Trigger: TGCCTCTCCCCATCTGCACCATCCCGGAGAACGCCT...TAGATGATAAGATGGTGTGGAGTAATATTTTAATTGGCCTCTTTTATGGAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR CAA 90 bp | ATTCCTGTTTCGATGGCCTTTTTCAGAGAGGCCAGATCTCCTGCTTaGGTGATAAAACTAATATTTGCGAAGACCCTACTCGGATCATCG | + |
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Preference number: 2 (lower is better) Translates to: IPVSMAFFREARSPA*VIKLIFAKTLLGSS Trigger: CGATGATCCGAGTAGGGTCTTCGCAAATATTAGTTTTATCACCAAAGCAGGAGATCTGGCCTCTCTGAAAAAGGCCATCGAAACAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR GCA 90 bp | ATTCCTGTTTCGATGGCCTTTTTCAGAGAGGCCAGATCTCCTGCTTTGGTGATAGAGGCAAAACAAACTTaGCTTTCCTTGGCTTTTTGC | + |
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Preference number: 2 (lower is better) Translates to: IPVSMAFFREARSPALVIEAKQT*LSLAFC Trigger: GCAAAAAGCCAAGGAAAGGCAAGTTTGTTTTGCCTC...TATCACCAAAGCAGGAGATCTGGCCTCTCTGAAAAAGGCCATCGAAACAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCCATAAAAGAGGCCAATTAAAATATTACTCCACACCATCTTATCATCTACCGGGATGGTGCAGATaGGGAGAGGCAAAACAAACT | + |
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Preference number: 2 (lower is better) Translates to: VLHKRGQLKYYSTPSYHLPGWCR*GEAKQT Trigger: AGTTTGTTTTGCCTCTCCCCATCTGCACCATCCCGG...TAGATGATAAGATGGTGTGGAGTAATATTTTAATTGGCCTCTTTTATGGAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCCATAAAAGAGGCCAATTAAAATATTACTCCACACCATCTTATCATCTATGCCATGCCCTCCTTTaGCTCCATCCTCTTTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: VLHKRGQLKYYSTPSYHLCHALL*LHPLFR Trigger: TCTGAAAAGAGGATGGAGGCAAAGGAGGGCATGGCA...TAGATGATAAGATGGTGTGGAGTAATATTTTAATTGGCCTCTTTTATGGAGGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR TCA 90 bp | AGACTATGCTTTAAAGATCTCTATAGATCAAGTCACCTCTCTGGAGATGGACTTAGGTCACATCCTCGCTaGGCTATATATTTACAGCAA | + |
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Preference number: 2 (lower is better) Translates to: RLCFKDLYRSSHLSGDGLRSHPR*AIYLQQ Trigger: TTGCTGTAAATATATAGCTCAGCGAGGATGTGACCT...AAGTCCATCTCCAGAGAGGTGACTTGATCTATAGAGATCTTTAAAGCATAGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCGTCCTCCATAAAAGAGGCCAATTAAAATATTACTCCACACCATCTTATCTCCTCTTTCCAATATaGCACGAACTATTTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: CLVLHKRGQLKYYSTPSYLLFPI*HELFPA Trigger: TGCTGGAAATAGTTCGTGGCATATTGGAAAGAGGAG...ATAAGATGGTGTGGAGTAATATTTTAATTGGCCTCTTTTATGGAGGACGAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCCATAAAAGAGGCCAATTAAAATATTACTCCACACCATCTTATCATCTAAAACTTGCCTTTCCTTaGCTTTTTGCCCAACCCCCT | + |
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Preference number: 2 (lower is better) Translates to: VLHKRGQLKYYSTPSYHLKLAFP*LFAQPP Trigger: AGGGGGTTGGGCAAAAAGCCAAGGAAAGGCAAGTTT...TAGATGATAAGATGGTGTGGAGTAATATTTTAATTGGCCTCTTTTATGGAGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCCATAAAAGAGGCCAATTAAAATATTACTCCACACCATCTTATCATCTAGATAAAACTAATATTTaGGAAGACCCTACTCGGATC | + |
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Preference number: 2 (lower is better) Translates to: VLHKRGQLKYYSTPSYHLDKTNI*EDPTRI Trigger: GATCCGAGTAGGGTCTTCGCAAATATTAGTTTTATC...TAGATGATAAGATGGTGTGGAGTAATATTTTAATTGGCCTCTTTTATGGAGGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR CCA 72 bp | GTAGGTCTCAATCATGTAGTAGGGCGGGCCCCCATCTaGCCGCCGCGGGAAGGCGTTCTCCGGGATGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: VGLNHVVGRAPI*PPREGVLRDGA Trigger: TGCACCATCCCGGAGAACGCCTTCCCGCGGCGGCCAGATGGGGGCCCGCCCTACTACATGATTGAGACCTAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR GCA 72 bp | CATCTGGCCGCCGCGGGAAGGCGTTCTCCGGGATGGTaGAGATGGGGAGAGGCAAAACAAACTTGCCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: HLAAAGRRSPGW*RWGEAKQTCLS Trigger: GGAAAGGCAAGTTTGTTTTGCCTCTCCCCATCTGCACCATCCCGGAGAACGCCTTCCCGCGGCGGCCAGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR CCA 72 bp | GCCGCCGCGGGAAGGCGTTCTCCGGGATGGTGCAGATaGGGAGAGGCAAAACAAACTTGCCTTTCCTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: AAAGRRSPGWCR*GEAKQTCLSLA Trigger: AGCCAAGGAAAGGCAAGTTTGTTTTGCCTCTCCCCATCTGCACCATCCCGGAGAACGCCTTCCCGCGGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR CAA 90 bp | GCCGCCGCGGGAAGGCGTTCTCCGGGATGGTGCAGATGGGGAGAGGCAAAACAAGCGTGGTGTCTATCATaGTCATATGCGTTCACTTCA | + |
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Preference number: 3 (lower is better) Translates to: AAAGRRSPGWCRWGEAKQAWCLS*SYAFTS Trigger: TGAAGTGAACGCATATGACAATGATAGACACCACGC...TTGTTTTGCCTCTCCCCATCTGCACCATCCCGGAGAACGCCTTCCCGCGGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR GCA 72 bp | CTTCACTGTGTGATCATCTTGGTGGGCCACCGTCTGTaGACCCATGATGCCATGCCCTCCTTTGCCTCCATC | + |
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Preference number: 3 (lower is better) Translates to: LHCVIILVGHRL*THDAMPSFASI Trigger: GATGGAGGCAAAGGAGGGCATGGCATCATGGGTGCACAGACGGTGGCCCACCAAGATGATCACACAGTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR CCA 72 bp | CGTGCATTTGAGCAACGGAAAGCAACTGCTCTGAGGTaGCATACTCTTGCCTCTCCTCCAGGGCCACCACGA | + |
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Preference number: 3 (lower is better) Translates to: RAFEQRKATALR*HTLASPPGPPR Trigger: TCGTGGTGGCCCTGGAGGAGAGGCAAGAGTATGCCACCTCAGAGCAGTTGCTTTCCGTTGCTCAAATGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR GCA 72 bp | GCAACGGAAAGCAACTGCTCTGAGGTGGCATACTCTTaGCTCTCCTCCAGGGCCACCACGAAGTCATCTTTG | + |
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Preference number: 3 (lower is better) Translates to: ATESNCSEVAYS*LSSRATTKSSL Trigger: CAAAGATGACTTCGTGGTGGCCCTGGAGGAGAGGCAAGAGTATGCCACCTCAGAGCAGTTGCTTTCCGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR GCA 72 bp | TCTTGGTGGGCCACCGTCTGTGCACCCATGATGCCATaGCCTCCTTTGCCTCCATCCTCTTTTCAGATCCTT | + |
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Preference number: 3 (lower is better) Translates to: SWWATVCAPMMP*PPLPPSSFQIL Trigger: AAGGATCTGAAAAGAGGATGGAGGCAAAGGAGGGCATGGCATCATGGGTGCACAGACGGTGGCCCACCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR TCA 72 bp | TTTTTCGTGCATTTGAGCAACGGAAAGCAACTGCTCTaGGGTGGCATACTCTTGCCTCTCCTCCAGGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: FFVHLSNGKQLL*GGILLPLLQGH Trigger: GTGGCCCTGGAGGAGAGGCAAGAGTATGCCACCTCAGAGCAGTTGCTTTCCGTTGCTCAAATGCACGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR TCA 72 bp | CAATATGCCACGAACTATTTCCAGCACCCCTTCTCTTaGCGATTCCATCAAAGCCGTGCGTCCTGTGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: QYATNYFQHPFS*RFHQSRASCGR Trigger: CCTTCCACAGGACGCACGGCTTTGATGGAATCGTCAAGAGAAGGGGTGCTGGAAATAGTTCGTGGCATATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR TCA 72 bp | AGACATCACCACCAGATTAAAACTGTCTTCACTGTGTaGTCATCTTGGTGGGCCACCGTCTGTGCACCCATG | + |
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Preference number: 3 (lower is better) Translates to: RHHHQIKTVFTV*SSWWATVCAPM Trigger: CATGGGTGCACAGACGGTGGCCCACCAAGATGATCACACAGTGAAGACAGTTTTAATCTGGTGGTGATGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR CCA 72 bp | GATCAAGTCACCTCTCTGGAGATGGACTTTAGGAAATaGAGAGGTAGGCATGCTTTCTGTCACCGTGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: DQVTSLEMDFRK*RGRHAFCHRGS Trigger: ACTCCCACGGTGACAGAAAGCATGCCTACCTCTCCATTTCCTAAAGTCCATCTCCAGAGAGGTGACTTGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR CAA 90 bp | ATTCCTGTTTCGATGGCCTTTTTCAGAGAGGCCAGATCTCCTGCTTTGGTGATACAAACTTGCCTTTCCTaGGCTTTTTGCCCAACCCCC | + |
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Preference number: 3 (lower is better) Translates to: IPVSMAFFREARSPALVIQTCLS*AFCPTP Trigger: GGGGGTTGGGCAAAAAGCCAAGGAAAGGCAAGTTTG...TATCACCAAAGCAGGAGATCTGGCCTCTCTGAAAAAGGCCATCGAAACAGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR CCA 72 bp | TATTGTCCTTCATATCCACGGGTATTCCTGTTTCGATaGCCTTTTTCAGAGAGGCCAGATCTCCTGCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: YCPSYPRVFLFR*PFSERPDLLLW Trigger: CCAAAGCAGGAGATCTGGCCTCTCTGAAAAAGGCCATCGAAACAGGAATACCCGTGGATATGAAGGACAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR GCA 72 bp | AGCAAAATGAGCAGCGTGGTGTCTATCATTGTCATATaGGTTCACTTCACCTCCTCTTTCCAATATGCCACG | + |
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Preference number: 3 (lower is better) Translates to: SKMSSVVSIIVI*VHFTSSFQYAT Trigger: CGTGGCATATTGGAAAGAGGAGGTGAAGTGAACGCATATGACAATGATAGACACCACGCTGCTCATTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR CAA 90 bp | GTCCTCCATAAAAGAGGCCAATTAAAATATTACTCCACACCATCTTATCATCTACACTGTGTGATCATCTaGGTGGGCCACCGTCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: VLHKRGQLKYYSTPSYHLHCVII*VGHRLC Trigger: GCACAGACGGTGGCCCACCAAGATGATCACACAGTG...TAGATGATAAGATGGTGTGGAGTAATATTTTAATTGGCCTCTTTTATGGAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR GCA 72 bp | TGTTTCGATGGCCTTTTTCAGAGAGGCCAGATCTCCTaGTTTGGTGATAAAACTAATATTTGCGAAGACCCT | + |
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Preference number: 3 (lower is better) Translates to: CFDGLFQRGQIS*FGDKTNICEDP Trigger: AGGGTCTTCGCAAATATTAGTTTTATCACCAAAGCAGGAGATCTGGCCTCTCTGAAAAAGGCCATCGAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATTACTTTCTCCAAACTTaGACTCTGGGCCACAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: KNWPLITNSQWVNCFGFDYFLQT*TLGHRV Trigger: TACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTA...ATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
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| 3UTR GCA 72 bp | AACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTaGTTTGGCTTTGATGGAAATACGTACTTTCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: NWPLITNSQWVN*FGFDGNTYFLQ Trigger: TTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
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| 3UTR TCA 72 bp | AATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTaGTGGAAATACGTACTTTCTCCAAACTTTGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: NYKFSVGELLWL*WKYVLSPNFDS Trigger: AGAGTCAAAGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| 3UTR TCA 72 bp | AAAAGCATTGCATATTTTAAGTCGTTTATTCATCAGTaGATTTGGAGCTGGGTCCTATTAGAGCCTATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KSIAYFKSFIHQ*IWSWVLLEPIA Trigger: TGCAATAGGCTCTAATAGGACCCAGCTCCAAATTCACTGATGAATAAACGACTTAAAATATGCAATGCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGAGGCGTTCTCCGGGATaGTGCAGATGGGGAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLRRSPG*CRWGEA Trigger: TGCCTCTCCCCATCTGCACCATCCCGGAGAACGCCT...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGGGAGCTCCCTCTTCCTaGTCAGCTCTGCTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLGAPSS*SALLLW Trigger: CCACAACAGCAGAGCTGATCAGGAAGAGGGAGCTCC...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGCTTCCTCGCAAGCTCTaGGGAACACTGGCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLLPRKL*GTLASL Trigger: AAGGGAAGCCAGTGTTCCTCAGAGCTTGCGAGGAAG...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGCCCATGGCAGCAAAGTaGAGTGGTGTGTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLPMAAK*SGVFPS Trigger: GGATGGGAACACACCACTTCACTTTGCTGCCATGGG...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGGAGGTGGCATACTCTTaGCTCTCCTCCAGGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPNFDSGPQSISPGREVAYS*LSSRAT Trigger: GGTGGCCCTGGAGGAGAGGCAAGAGTATGCCACCTC...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGCGTTCTCCGGGATGGTaGAGATGGGGAGAGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLRSPGW*RWGEAK Trigger: TTTTGCCTCTCCCCATCTGCACCATCCCGGAGAACG...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGGGGGTACAGCCCATGTaGTCTTGCACATCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLGVQPM*SCTSGC Trigger: GCATCCTGATGTGCAAGACCACATGGGCTGTACCCC...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | CGAACTATTTCCAGCACCCCTTCTCTTGACGATTCCATCAAAGCCGTGCGTCCTTCCATTGACAACTCATaGCCCAGCTCGGCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTISSTPSLDDSIKAVRPSIDNS*PSSAAL Trigger: GAGAGCTGCCGAGCTGGGCCATGAGTTGTCAATGGA...AGGACGCACGGCTTTGATGGAATCGTCAAGAGAAGGGGTGCTGGAAATAGTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR CCA 90 bp | TACGTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGAGGCGTTCTCCGGGATaGTGCAGATGGGGAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YVLSPNFDSGPQSISPGRRRSPG*CRWGEA Trigger: TGCCTCTCCCCATCTGCACCATCCCGGAGAACGCCT...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTACGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGAGTCCACCTCGTATGTaGACCTCTCCCTCCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPNFDSGPQSISPGRSPPRM*TSPSGA Trigger: AGCTCCGGAGGGAGAGGTTCACATACGAGGTGGACT...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR TCA 90 bp | TACGTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGAGTCCACCTCGTATGTaGACCTCTCCCTCCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YVLSPNFDSGPQSISPGRSPPRM*TSPSGA Trigger: AGCTCCGGAGGGAGAGGTTCACATACGAGGTGGACT...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTACGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGGAGTGTTGCCTCCAGTaGCTGAGCTTTCTCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLECCLQ*LSFLRD Trigger: ATCACGGAGAAAGCTCAGGCACTGGAGGCAACACTC...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAGCAAAATGAGCAGCGTGGTGTCTATCATTGTCATATGCGTTCACTTCACGCTCGGCAGCTCTCATaGTCGGGGTACAGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: WQQNEQRGVYHCHMRSLHARQLS*SGYSPC Trigger: ACATGGGCTGTACCCCGACCATGAGAGCTGCCGAGC...GTGAAGTGAACGCATATGACAATGATAGACACCACGCTGCTCATTTTGCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGCCGGGATGGTGCAGATaGGGAGAGGCAAAACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLPGWCR*GEAKQT Trigger: AGTTTGTTTTGCCTCTCCCCATCTGCACCATCCCGG...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | TACGTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCAGCCCATGTGGTCTTaGACATCAGGATGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: YVLSPNFDSGPQSISPGRQPMWS*TSGCAP Trigger: TGGTGCGCATCCTGATGTGCAAGACCACATGGGCTG...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTACGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | ATCACCACCAGATTAAAACTGTCTTCACTGTGTGATCATCTTGGTGGGCCACCGCAGCCCATGTGGTCTTaGACATCAGGATGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ITTRLKLSSLCDHLGGPPQPMWS*TSGCAP Trigger: TGGTGCGCATCCTGATGTGCAAGACCACATGGGCTG...CGGTGGCCCACCAAGATGATCACACAGTGAAGACAGTTTTAATCTGGTGGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGTCTATGGACCAGTCATaGAGCCTGAGGGCCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPNFDSGPQSISPGRSMDQS*SLRAQR Trigger: TCTCTGGGCCCTCAGGCTGCATGACTGGTCCATAGA...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGGCAACGGAAAGCAACTaGTCTGAGGTGGCATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLATESN*SEVAYS Trigger: AGAGTATGCCACCTCAGAGCAGTTGCTTTCCGTTGC...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | TACGTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCGTTCTCCGGGATGGTaGAGATGGGGAGAGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YVLSPNFDSGPQSISPGRRSPGW*RWGEAK Trigger: TTTTGCCTCTCCCCATCTGCACCATCCCGGAGAACG...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTACGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGCTGGCCAGCATGGCATaGAAAATGAAGTGGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLLASMA*KMKWSP Trigger: TGGACTCCACTTCATTTTGCATGCCATGCTGGCCAG...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGAGCTCAACAATGTCTTaGTGGCCAGCATGGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLSSTMS*WPAWHA Trigger: TGCATGCCATGCTGGCCAGCAAGACATTGTTGAGCT...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGTCCACTGCAAAGGGACCAACAAACACCAAACCCGAAACCTGAAACCCAACAGGGTACCCAAGCCTaGTCAGCTTTTCTATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCPLQRDQQTPNPKPETQQGTQA*SAFLSA Trigger: AGCAGATAGAAAAGCTGACCAGGCTTGGGTACCCTG...TTGGGTTTCAGGTTTCGGGTTTGGTGTTTGTTGGTCCCTTTGCAGTGGACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGGAAATGGAGGCTAAGTaGAGAGCACTCAGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLEMEAK*RALSPS Trigger: AGATGGGCTGAGTGCTCTCCACTTAGCCTCCATTTC...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | ATATGCCACGAACTATTTCCAGCACCCCTTCTCTTGACGATTCCATCAAAGCCGGGGGTACAGCCCATGTaGTCTTGCACATCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ICHELFPAPLLLTIPSKPGVQPM*SCTSGC Trigger: GCATCCTGATGTGCAAGACCACATGGGCTGTACCCC...CGGCTTTGATGGAATCGTCAAGAGAAGGGGTGCTGGAAATAGTTCGTGGCATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| 3UTR CAA 72 bp | CCAATATGCCACGAACTATTTCCAGCACCCCTTCTCTaGACGATTCCATCAAAGCCGTGCGTCCTGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PICHELFPAPLL*TIPSKPCVLWK Trigger: CTTCCACAGGACGCACGGCTTTGATGGAATCGTCAAGAGAAGGGGTGCTGGAAATAGTTCGTGGCATATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGTTGACATCTGCACCATaGTCCAAGGCAATCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLLTSAP*SKAISE Trigger: CTCACTGATTGCCTTGGAGCATGGTGCAGATGTCAA...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGAGCTCTGAGGAACACTaGCTTCCCTTCATAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLSSEEH*LPFIGD Trigger: ATCACCTATGAAGGGAAGCCAGTGTTCCTCAGAGCT...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGAGCTTTCAATGGCTCTaGTTAACGGAGTGGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLSFQWL*LTEWSC Trigger: ACAACTCCACTCCGTTAAGCAGAGCCATTGAAAGCT...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGTTAGTTCTTGAGTGTTaGCTCCAGTGCCTGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLLVLEC*LQCLSF Trigger: AAAGCTCAGGCACTGGAGGCAACACTCAAGAACTAA...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCAGGGTACCCAAGCCTaGTCAGCTTTTCTATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPNFDSGPQSISPGRQGTQA*SAFLSA Trigger: AGCAGATAGAAAAGCTGACCAGGCTTGGGTACCCTG...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CCA 90 bp | TACGTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGGAAATGGAGGCTAAGTaGAGAGCACTCAGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: YVLSPNFDSGPQSISPGREMEAK*RALSPS Trigger: AGATGGGCTGAGTGCTCTCCACTTAGCCTCCATTTC...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTACGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCGCTCGGCAGCTCTCATaGTCGGGGTACAGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLARQLS*SGYSPC Trigger: ACATGGGCTGTACCCCGACCATGAGAGCTGCCGAGC...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CCA 90 bp | TGTTGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGCTCGGCAGCTCTCATaGTCGGGGTACAGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: CCCKNWPLITNSQWVNCFARQLS*SGYSPC Trigger: ACATGGGCTGTACCCCGACCATGAGAGCTGCCGAGC...AAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGTCAACAATGTCTTGCTaGCCAGCATGGCATGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLSTMSC*PAWHAK Trigger: TTTTGCATGCCATGCTGGCCAGCAAGACATTGTTGA...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGTCAGCTCTGCTGTTGTaGCTTCAGGACTCCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPNFDSGPQSISPGRSALLL*LQDSKS Trigger: GGATTTGGAGTCCTGAAGCCACAACAGCAGAGCTGA...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGTTTGGAAAGGCATCATaGAGTCTTCAAAGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLFGKAS*SLQSPP Trigger: AGGTGGACTTTGAAGACTTCATGATGCCTTTCCAAA...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | TACGTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGTTGACATCTGCACCATaGTCCAAGGCAATCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YVLSPNFDSGPQSISPGRLTSAP*SKAISE Trigger: CTCACTGATTGCCTTGGAGCATGGTGCAGATGTCAA...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTACGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | TGTCCACTGCAAAGGGACCAACAAACACCAAACCCGAAACCTGAAACCCAAAACTTGACATCTGCACCATaGTCCAAGGCAATCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRDQQTPNPKPETQNLTSAP*SKAISE Trigger: CTCACTGATTGCCTTGGAGCATGGTGCAGATGTCAA...GTTTTGGGTTTCAGGTTTCGGGTTTGGTGTTTGTTGGTCCCTTTGCAGTGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGATCCTTCACATCATGTaGTTCCTCGCAAGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPNFDSGPQSISPGRILHIM*FLASSE Trigger: CTCAGAGCTTGCGAGGAAGCACATGATGTGAAGGAT...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | ATATGCCACGAACTATTTCCAGCACCCCTTCTCTTGACGATTCCATCAAAGCCGATCCTTCACATCATGTaGTTCCTCGCAAGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ICHELFPAPLLLTIPSKPILHIM*FLASSE Trigger: CTCAGAGCTTGCGAGGAAGCACATGATGTGAAGGAT...CGGCTTTGATGGAATCGTCAAGAGAAGGGGTGCTGGAAATAGTTCGTGGCATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGGAGGCAAAACAAACTTaGCTTTCCTTGGCTTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLEAKQT*LSLAFC Trigger: GCAAAAAGCCAAGGAAAGGCAAGTTTGTTTTGCCTC...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGATCAGCATATGCCTTTaGAATATCCATGGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLISICL*NIHGSM Trigger: CATGCTGCCATGGATATTGCAAAGGCATATGCTGAT...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TGTCCACTGCAAAGGGACCAACAAACACCAAACCCGAAACCTGAAACCCAAAACAGCTCTGAGGAACACTaGCTTCCCTTCATAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CPLQRDQQTPNPKPETQNSSEEH*LPFIGD Trigger: ATCACCTATGAAGGGAAGCCAGTGTTCCTCAGAGCT...GTTTTGGGTTTCAGGTTTCGGGTTTGGTGTTTGTTGGTCCCTTTGCAGTGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR CCA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGAAACTTGCCTTTCCTTaGCTTTTTGCCCAACCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPNFDSGPQSISPGRKLAFP*LFAQPP Trigger: AGGGGGTTGGGCAAAAAGCCAAGGAAAGGCAAGTTT...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCCCATGGCAGCAAAGTaGAGTGGTGTGTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLPMAAK*SGVFPS Trigger: GGATGGGAACACACCACTTCACTTTGCTGCCATGGG...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCAGCCCATGTGGTCTTaGACATCAGGATGCGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLQPMWS*TSGCAP Trigger: TGGTGCGCATCCTGATGTGCAAGACCACATGGGCTG...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTGAGGTGGCATACTCTTaGCTCTCCTCCAGGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFEVAYS*LSSRAT Trigger: GGTGGCCCTGGAGGAGAGGCAAGAGTATGCCACCTC...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGAGAGGCCAGATCTCCTaGTTTGGTGATAAAACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLRGQIS*FGDKTN Trigger: ATTAGTTTTATCACCAAAGCAGGAGATCTGGCCTCT...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCTCCATTGACAACTCATaGCCCAGCTCGGCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLSIDNS*PSSAAL Trigger: GAGAGCTGCCGAGCTGGGCCATGAGTTGTCAATGGA...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CCA 90 bp | TGTTGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTTCCATTGACAACTCATaGCCCAGCTCGGCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCCKNWPLITNSQWVNCFSIDNS*PSSAAL Trigger: GAGAGCTGCCGAGCTGGGCCATGAGTTGTCAATGGA...AAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGTCCGTGATGTTCTTTTaGAAAGGCATCATGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLSVMFF*KGIMKS Trigger: AGACTTCATGATGCCTTTCCAAAAGAACATCACGGA...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTCGTCCTCCATAAAAGAGGCCAATTAAAATATTACTCCACACCATCTTATCTTCCTCGCAAGCTCTaGGGAACACTGGCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLVLHKRGQLKYYSTPSYLPRKL*GTLASL Trigger: AAGGGAAGCCAGTGTTCCTCAGAGCTTGCGAGGAAG...ATAAGATGGTGTGGAGTAATATTTTAATTGGCCTCTTTTATGGAGGACGAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR TCA 90 bp | TACGTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGAGGTCACATCCTCGCTaGGCTATATATTTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YVLSPNFDSGPQSISPGRRSHPR*AIYLQQ Trigger: TTGCTGTAAATATATAGCTCAGCGAGGATGTGACCT...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTACGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCGGAAAGCAACTGCTCTaGGGTGGCATACTCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLGKQLL*GGILLP Trigger: AGGCAAGAGTATGCCACCTCAGAGCAGTTGCTTTCC...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR TCA 90 bp | TGTTGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGAAAGCAACTGCTCTaGGGTGGCATACTCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCCKNWPLITNSQWVNCFGKQLL*GGILLP Trigger: AGGCAAGAGTATGCCACCTCAGAGCAGTTGCTTTCC...AAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGGCATGGCATGCAAAATaGAGTGGAGTCCATAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPNFDSGPQSISPGRAWHAK*SGVHRK Trigger: TTTTCTATGGACTCCACTTCATTTTGCATGCCATGC...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR TCA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTGGAGCTCCCTCTTCCTaGTCAGCTCTGCTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFGAPSS*SALLLW Trigger: CCACAACAGCAGAGCTGATCAGGAAGAGGGAGCTCC...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGTTTGGAAAGGCATCATaGAGTCTTCAAAGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPNFDSGPQSISPGRFGKAS*SLQSPP Trigger: AGGTGGACTTTGAAGACTTCATGATGCCTTTCCAAA...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCTCTTTCCAATATGCCACGAACTATTTCCAGCACCCCTTCTCTTGACGATGCTTCTTGTCTTTGTTaGGAACACACTGAAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PPLSNMPRTISSTPSLDDASCLC*EHTEEL Trigger: GAGTTCTTCAGTGTGTTCGCAACAAAGACAAGAAGC...ATCGTCAAGAGAAGGGGTGCTGGAAATAGTTCGTGGCATATTGGAAAGAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR GCA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGGATATTGTTGACATCTaGACCATGCTCCAAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPNFDSGPQSISPGRDIVDI*TMLQGN Trigger: ATTGCCTTGGAGCATGGTGCAGATGTCAACAATATC...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCAAACTCTGGCCAGCATGGCATaGAAAATGAAGTGGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQWVNCFGFDGNTYFLQTLASMA*KMKWSP Trigger: TGGACTCCACTTCATTTTGCATGCCATGCTGGCCAG...AGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGTCTATAATCAGCATATaGCTTTGCAATATCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLSIISI*LCNIHG Trigger: GCCATGGATATTGCAAAGGCATATGCTGATTATAGA...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCGAGTGTTGCCTCCAGTaGCTGAGCTTTCTCCGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLECCLQ*LSFLRD Trigger: ATCACGGAGAAAGCTCAGGCACTGGAGGCAACACTC...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGGGGGTACAGCCCATGTaGTCTTGCACATCAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PLITNSQWVNCFGFDGNTGVQPM*SCTSGC Trigger: GCATCCTGATGTGCAAGACCACATGGGCTGTACCCC...CGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCAAACTGGCAGCAAAGTGAAGTaGTGTGTTCCCATCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQWVNCFGFDGNTYFLQTGSKVK*CVPIHS Trigger: GGAATGGATGGGAACACACCACTTCACTTTGCTGCC...AGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCGCAACTGCTCTGAGGTaGCATACTCTTGCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLATALR*HTLASP Trigger: AGGAGAGGCAAGAGTATGCCACCTCAGAGCAGTTGC...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CCA 90 bp | ACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCCGGGATGGTGCAGATaGGGAGAGGCAAAACAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TNSQWVNCFGFDGNTYFLPGWCR*GEAKQT Trigger: AGTTTGTTTTGCCTCTCCCCATCTGCACCATCCCGG...GAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGTTTCAATCTGGAATTTaGCACCCATATCAAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLFQSGI*HPYQVG Trigger: ACCTACTTGATATGGGTGCCAAATTCCAGATTGAAA...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCCTTTGCAATATCCATaGCAGCATGTCCTTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLLSPNFDSGPQSISPGRPLQYP*QHVLFC Trigger: ACAGAAAAGGACATGCTGCCATGGATATTGCAAAGG...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| 3UTR CAA 72 bp | TACCCCTTTTCGATAAGAAACTTGACCACATCAATGTaGCCACTGGCACACGCTATCATGAGAGGAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YPFSIRNLTTSM*PLAHAIMRGVL Trigger: CAAGACTCCTCTCATGATAGCGTGTGCCAGTGGCAACATTGATGTGGTCAAGTTTCTTATCGAAAAGGGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR TCA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTTCCTCGCAAGCTCTaGGGAACACTGGCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFLPRKL*GTLASL Trigger: AAGGGAAGCCAGTGTTCCTCAGAGCTTGCGAGGAAG...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR TCA 90 bp | TACGTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCACAGTGTAAATGGATaGCAGTGTTTCCTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YVLSPNFDSGPQSISPGRHSVNG*QCFLFF Trigger: AAAGAAGAGGAAACACTGTCATCCATTTACACTGTG...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTACGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCTCTTGCACATCAGGATaGGCACCAAGTTTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLSCTSG*APSLRR Trigger: CCTCCTCAAACTTGGTGCGCATCCTGATGTGCAAGA...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | TGTTGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTTCTTGCACATCAGGATaGGCACCAAGTTTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCCKNWPLITNSQWVNCFSCTSG*APSLRR Trigger: CCTCCTCAAACTTGGTGCGCATCCTGATGTGCAAGA...AAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCAAACTATCCTTCACATCATGTaGTTCCTCGCAAGCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQWVNCFGFDGNTYFLQTILHIM*FLASSE Trigger: CTCAGAGCTTGCGAGGAAGCACATGATGTGAAGGAT...AGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTTCTATGGACCAGTCATaGAGCCTGAGGGCCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFSMDQS*SLRAQR Trigger: TCTCTGGGCCCTCAGGCTGCATGACTGGTCCATAGA...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | TACGTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGAGAGGCCAGATCTCCTaGTTTGGTGATAAAACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: YVLSPNFDSGPQSISPGRRGQIS*FGDKTN Trigger: ATTAGTTTTATCACCAAAGCAGGAGATCTGGCCTCT...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTACGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGTGTTGCATTAACATTTaGCCCCTTTTCGATAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLCCINI*PLFDKK Trigger: TTTCTTATCGAAAAGGGGGCAAATGTTAATGCAACA...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGCATTTTCTGATTATCTaGTTGTTTAGGCAGGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLHFLII*LFRQVI Trigger: GATAACCTGCCTAAACAAGCAGATAATCAGAAAATG...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | ACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCAGGGTACCCAAGCCTaGTCAGCTTTTCTATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNSQWVNCFGFDGNTYFLQGTQA*SAFLSA Trigger: AGCAGATAGAAAAGCTGACCAGGCTTGGGTACCCTG...GAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCGGCAGCAAAGTGAAGTaGTGTGTTCCCATCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLGSKVK*CVPIHS Trigger: GGAATGGATGGGAACACACCACTTCACTTTGCTGCC...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CCA 90 bp | AAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGCAACTGCTCTGAGGTaGCATACTCTTGCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNWPLITNSQWVNCFGFDATALR*HTLASP Trigger: AGGAGAGGCAAGAGTATGCCACCTCAGAGCAGTTGC...ATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCGCCTACAGCTTTCAATaGCTCTGCTTAACGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLAYSFQ*LCLTEW Trigger: CCACTCCGTTAAGCAGAGCCATTGAAAGCTGTAGGC...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGTTTCTGTTTTCAATCTaGAATTTGGCACCCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPNFDSGPQSISPGRLLFLFSI*NLAPIS Trigger: TGATATGGGTGCCAAATTCCAGATTGAAAACAGAAA...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | ACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCTCAGCTCTGCTGTTGTaGCTTCAGGACTCCAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TNSQWVNCFGFDGNTYFLSALLL*LQDSKS Trigger: GGATTTGGAGTCCTGAAGCCACAACAGCAGAGCTGA...GAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| 3UTR CAA 72 bp | TCGATGGCCTTTTTCAGAGAGGCCAGATCTCCTGCTTaGGTGATAAAACTAATATTTGCGAAGACCCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SMAFFREARSPA*VIKLIFAKTLL Trigger: GAGTAGGGTCTTCGCAAATATTAGTTTTATCACCAAAGCAGGAGATCTGGCCTCTCTGAAAAAGGCCATCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR GCA 90 bp | AAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGCAACGGAAAGCAACTaGTCTGAGGTGGCATACTCT | + |
|
Preference number: 4 (lower is better) Translates to: KNWPLITNSQWVNCFGFDATESN*SEVAYS Trigger: AGAGTATGCCACCTCAGAGCAGTTGCTTTCCGTTGC...ATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTAAACTTGCCTTTCCTTaGCTTTTTGCCCAACCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCCKNWPLITNSQWVNCFKLAFP*LFAQPP Trigger: AGGGGGTTGGGCAAAAAGCCAAGGAAAGGCAAGTTT...AAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TACGTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGTTTCAATCTGGAATTTaGCACCCATATCAAGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YVLSPNFDSGPQSISPGRFQSGI*HPYQVG Trigger: ACCTACTTGATATGGGTGCCAAATTCCAGATTGAAA...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTACGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR TCA 90 bp | TCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCAAACTGCATGGCATGCAAAATaGAGTGGAGTCCATAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQWVNCFGFDGNTYFLQTAWHAK*SGVHRK Trigger: TTTTCTATGGACTCCACTTCATTTTGCATGCCATGC...AGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | TACGTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGTGTTGCATTAACATTTaGCCCCTTTTCGATAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YVLSPNFDSGPQSISPGRCCINI*PLFDKK Trigger: TTTCTTATCGAAAAGGGGGCAAATGTTAATGCAACA...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTACGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTAGCTCAACAATGTCTTaGTGGCCAGCATGGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFSSTMS*WPAWHA Trigger: TGCATGCCATGCTGGCCAGCAAGACATTGTTGAGCT...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCAGCTTTCAATGGCTCTaGTTAACGGAGTGGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLSFQWL*LTEWSC Trigger: ACAACTCCACTCCGTTAAGCAGAGCCATTGAAAGCT...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | ACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCTTAGTTCTTGAGTGTTaGCTCCAGTGCCTGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TNSQWVNCFGFDGNTYFLLVLEC*LQCLSF Trigger: AAAGCTCAGGCACTGGAGGCAACACTCAAGAACTAA...GAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | AAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATAGCTCTGAGGAACACTaGCTTCCCTTCATAGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KNWPLITNSQWVNCFGFDSSEEH*LPFIGD Trigger: ATCACCTATGAAGGGAAGCCAGTGTTCCTCAGAGCT...ATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCGTATTCCTGTTTCGATaGCCTTTTTCAGAGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLVFLFR*PFSERP Trigger: TGGCCTCTCTGAAAAAGGCCATCGAAACAGGAATAC...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CCA 90 bp | ACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCGTATTCCTGTTTCGATaGCCTTTTTCAGAGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNSQWVNCFGFDGNTYFLVFLFR*PFSERP Trigger: TGGCCTCTCTGAAAAAGGCCATCGAAACAGGAATAC...GAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTGCCTACAGCTTTCAATaGCTCTGCTTAACGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFAYSFQ*LCLTEW Trigger: CCACTCCGTTAAGCAGAGCCATTGAAAGCTGTAGGC...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCACCACACTATCCCTGTaGACTTTCTTCTCCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLTTLSL*TFFSSV Trigger: AACAGAGGAGAAGAAAGTCCACAGGGATAGTGTGGT...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCAGGTCACATCCTCGCTaGGCTATATATTTACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLRSHPR*AIYLQQ Trigger: TTGCTGTAAATATATAGCTCAGCGAGGATGTGACCT...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCGCTTCTTGTCTTTGTTaGGAACACACTGAAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLASCLC*EHTEEL Trigger: GAGTTCTTCAGTGTGTTCGCAACAAAGACAAGAAGC...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTCCTCTTTCCAATATaGCACGAACTATTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLLLFPI*HELFPA Trigger: TGCTGGAAATAGTTCGTGGCATATTGGAAAGAGGAG...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | TGTTGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTCTCCTCTTTCCAATATaGCACGAACTATTTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCCKNWPLITNSQWVNCFLLFPI*HELFPA Trigger: TGCTGGAAATAGTTCGTGGCATATTGGAAAGAGGAG...AAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | ACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCGAGGCAAAACAAACTTaGCTTTCCTTGGCTTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TNSQWVNCFGFDGNTYFLEAKQT*LSLAFC Trigger: GCAAAAAGCCAAGGAAAGGCAAGTTTGTTTTGCCTC...GAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTTCTCCTCTGTTATTaGTGGCACAGTGTAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLLLLCY*WHSVNG Trigger: TCCATTTACACTGTGCCAGCAATAACAGAGGAGAAG...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTCAACAATGTCTTGCTaGCCAGCATGGCATGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLITNSQWVNCFGFDGNTSTMSC*PAWHAK Trigger: TTTTGCATGCCATGCTGGCCAGCAAGACATTGTTGA...CGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTCCTTTGCAATATCCATaGCAGCATGTCCTTTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCCKNWPLITNSQWVNCFPLQYP*QHVLFC Trigger: ACAGAAAAGGACATGCTGCCATGGATATTGCAAAGG...AAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGCACAGTGTAAATaGATGACAGTGTTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLLAQCK*MTVFPL Trigger: AAGAGGAAACACTGTCATCCATTTACACTGTGCCAG...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CCA 90 bp | TGTTGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTCTGGCACAGTGTAAATaGATGACAGTGTTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCCKNWPLITNSQWVNCFLAQCK*MTVFPL Trigger: AAGAGGAAACACTGTCATCCATTTACACTGTGCCAG...AAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCAAACTTCCGTGATGTTCTTTTaGAAAGGCATCATGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQWVNCFGFDGNTYFLQTSVMFF*KGIMKS Trigger: AGACTTCATGATGCCTTTCCAAAAGAACATCACGGA...AGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
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| CDS-3UTR TCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCACAGTGTAAATGGATaGCAGTGTTTCCTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLHSVNG*QCFLFF Trigger: AAAGAAGAGGAAACACTGTCATCCATTTACACTGTG...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
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| CDS-3UTR GCA 90 bp | AAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGCTTCTTGTCTTTGTTaGGAACACACTGAAGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: KNWPLITNSQWVNCFGFDASCLC*EHTEEL Trigger: GAGTTCTTCAGTGTGTTCGCAACAAAGACAAGAAGC...ATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
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| CDS-3UTR GCA 90 bp | TGCCTCGTCCTCCATAAAAGAGGCCAATTAAAATATTACTCCACACCATCTTATGATATTGTTGACATCTaGACCATGCTCCAAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLVLHKRGQLKYYSTPSYDIVDI*TMLQGN Trigger: ATTGCCTTGGAGCATGGTGCAGATGTCAACAATATC...ATAAGATGGTGTGGAGTAATATTTTAATTGGCCTCTTTTATGGAGGACGAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| CDS-3UTR GCA 90 bp | CCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGATCAGCATATGCCTTTaGAATATCCATGGCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PLITNSQWVNCFGFDGNTISICL*NIHGSM Trigger: CATGCTGCCATGGATATTGCAAAGGCATATGCTGAT...CGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
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| CDS-3UTR CCA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTACCACACTATCCCTGTaGACTTTCTTCTCCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFTTLSL*TFFSSV Trigger: AACAGAGGAGAAGAAAGTCCACAGGGATAGTGTGGT...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
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| CDS-3UTR GCA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTGATATTGTTGACATCTaGACCATGCTCCAAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFDIVDI*TMLQGN Trigger: ATTGCCTTGGAGCATGGTGCAGATGTCAACAATATC...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
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| CDS-3UTR GCA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCGATAAAACTAATATTTaGGAAGACCCTACTCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLDKTNI*EDPTRI Trigger: GATCCGAGTAGGGTCTTCGCAAATATTAGTTTTATC...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR GCA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTTCTCCTCTGTTATTaGTGGCACAGTGTAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFLLLCY*WHSVNG Trigger: TCCATTTACACTGTGCCAGCAATAACAGAGGAGAAG...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
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| CDS-3UTR GCA 90 bp | CCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGGATAAAACTAATATTTaGGAAGACCCTACTCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PLITNSQWVNCFGFDGNTDKTNI*EDPTRI Trigger: GATCCGAGTAGGGTCTTCGCAAATATTAGTTTTATC...CGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | AAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATTCTATAATCAGCATATaGCTTTGCAATATCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNWPLITNSQWVNCFGFDSIISI*LCNIHG Trigger: GCCATGGATATTGCAAAGGCATATGCTGATTATAGA...ATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTTTTCTGTTTTCAATCTaGAATTTGGCACCCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: CCCKNWPLITNSQWVNCFFLFSI*NLAPIS Trigger: TGATATGGGTGCCAAATTCCAGATTGAAAACAGAAA...AAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCAACA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR GCA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCATTTTCTGATTATCTaGTTGTTTAGGCAGGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFHFLII*LFRQVI Trigger: GATAACCTGCCTAAACAAGCAGATAATCAGAAAATG...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS GCA 90 bp | CCCAGCTCGGCAGCTCTCATGGTCGGGGTACAGCCCATGTGGTCTTaGACATCAGGATGCGCACCAAGTTTGAGGAGGAAGCTGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: PSSAALMVGVQPMWS*TSGCAPSLRRKLTM Trigger: CATGGTCAGCTTCCTCCTCAAACTTGGTGCGCATCCTGATGTGCAAGACCACATGGGCTGTACCCCGACCATGAGAGCTGCCGAGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
||
| CDS CCA 90 bp | TCATGGCCCAGCTCGGCAGCTCTCATGGTCGGGGTACAGCCCATGTaGTCTTGCACATCAGGATGCGCACCAAGTTTGAGGAGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SWPSSAALMVGVQPM*SCTSGCAPSLRRKL Trigger: CAGCTTCCTCCTCAAACTTGGTGCGCATCCTGATGTGCAAGACCACATGGGCTGTACCCCGACCATGAGAGCTGCCGAGCTGGGCCATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
||
| CDS GCA 90 bp | GCTCTCATGGTCGGGGTACAGCCCATGTGGTCTTGCACATCAGGATaGGCACCAAGTTTGAGGAGGAAGCTGACCATGTCAGTGTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALMVGVQPMWSCTSG*APSLRRKLTMSVSL Trigger: CAACGACACTGACATGGTCAGCTTCCTCCTCAAACTTGGTGCGCATCCTGATGTGCAAGACCACATGGGCTGTACCCCGACCATGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
||
| CDS CCA 90 bp | CTAAAATTTCCATTGACAACTCATGGCCCAGCTCGGCAGCTCTCATaGTCGGGGTACAGCCCATGTGGTCTTGCACATCAGGATGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LKFPLTTHGPARQLS*SGYSPCGLAHQDAH Trigger: GTGCGCATCCTGATGTGCAAGACCACATGGGCTGTACCCCGACCATGAGAGCTGCCGAGCTGGGCCATGAGTTGTCAATGGAAATTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGACAGCCCATGTGGTCTaGCACATCAGGATGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LSPNFDSGPQSISPGRLLTAHVV*HIRMRT Trigger: GGTGCGCATCCTGATGTGCAAGACCACATGGGCTGT...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS CCA 90 bp | GTCATATCAGCTTTGGCCTTGGCTAAAATTTCCATTGACAACTCATaGCCCAGCTCGGCAGCTCTCATGGTCGGGGTACAGCCCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VISALALAKISIDNS*PSSAALMVGVQPMW Trigger: CCACATGGGCTGTACCCCGACCATGAGAGCTGCCGAGCTGGGCCATGAGTTGTCAATGGAAATTTTAGCCAAGGCCAAAGCTGATATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGGGATGCGCACCAAGTTaGAGGAGGAAGCTGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: LSPNFDSGPQSISPGRLLGCAPS*RRKLTM Trigger: CATGGTCAGCTTCCTCCTCAAACTTGGTGCGCATCC...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGCAAACTTGCCTTTCCTaGGCTTTTTGCCCAACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSPNFDSGPQSISPGRLLQTCLS*AFCPTP Trigger: GGGGGTTGGGCAAAAAGCCAAGGAAAGGCAAGTTTG...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGAAGCTCAACAATGTCTaGCTGGCCAGCATGGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLSPNFDSGPQSISPGRKLNNV*LASMAC Trigger: GCATGCCATGCTGGCCAGCAAGACATTGTTGAGCTT...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS TCA 90 bp | TCCTCTTTCCAATATGCCACGAACTATTTCCAGCACCCCTTCTCTTaGCGATTCCATCAAAGCCGTGCGTCCTGTGGATGTGTTGATAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSFQYATNYFQHPFS*RFHQSRASCGCVDS Trigger: GCTATCAACACATCCACAGGACGCACGGCTTTGATGGAATCGTCAAGAGAAGGGGTGCTGGAAATAGTTCGTGGCATATTGGAAAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000180246.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGGCGTGGTGTCTATCATaGTCATATGCGTTCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPNFDSGPQSISPGRLLAWCLS*SYAFTS Trigger: TGAAGTGAACGCATATGACAATGATAGACACCACGC...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGTTGACCACATCAATGTaGCCACTGGCACACGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: VLLSPNFDSGPQSISPGRLTTSM*PLAHAI Trigger: GATAGCGTGTGCCAGTGGCAACATTGATGTGGTCAA...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGCTCCGTGATGTTCTTTaGGAAAGGCATCATGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSPNFDSGPQSISPGRLLLRDVL*ERHHEV Trigger: GACTTCATGATGCCTTTCCAAAAGAACATCACGGAG...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS TCA 90 bp | ATAGGTGATATTGTTGACATCTGCACCATGCTCCAAGGCAATCAGTaGGCATCGATAGTGCCGCTTAGTGGGCAGGATGCAGTAAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: IGDIVDICTMLQGNQ*ASIVPLSGQDAVKQ Trigger: CTGTTTTACTGCATCCTGCCCACTAAGCGGCACTATCGATGCTCACTGATTGCCTTGGAGCATGGTGCAGATGTCAACAATATCACCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
||
| CDS CCA 90 bp | CATATCCTTCACATCATGTGCTTCCTCGCAAGCTCTGAGGAACACTaGCTTCCCTTCATAGGTGATATTGTTGACATCTGCACCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HILHIMCFLASSEEH*LPFIGDIVDICTML Trigger: GAGCATGGTGCAGATGTCAACAATATCACCTATGAAGGGAAGCCAGTGTTCCTCAGAGCTTGCGAGGAAGCACATGATGTGAAGGATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGAATCAGCATATGCCTTaGCAATATCCATGGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSPNFDSGPQSISPGRLLNQHMP*QYPWQH Trigger: ATGCTGCCATGGATATTGCAAAGGCATATGCTGATT...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGACAGCCCATGTGGTCTaGCACATCAGGATGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PLITNSQWVNCFGFDGNTTAHVV*HIRMRT Trigger: GGTGCGCATCCTGATGTGCAAGACCACATGGGCTGT...CGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | AGACTATGCTTTAAAGATCTCTATAGATCAAGTCACCTCTCTGGAGATGGACTTACAGCCCATGTGGTCTaGCACATCAGGATGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RLCFKDLYRSSHLSGDGLTAHVV*HIRMRT Trigger: GGTGCGCATCCTGATGTGCAAGACCACATGGGCTGT...AAGTCCATCTCCAGAGAGGTGACTTGATCTATAGAGATCTTTAAAGCATAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGTGGCTAAAATTTCCATaGACAACTCATGGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLLSPNFDSGPQSISPGRWLKFP*TTHGPA Trigger: AGCTGGGCCATGAGTTGTCAATGGAAATTTTAGCCA...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CAA 90 bp | ATCACCACCAGATTAAAACTGTCTTCACTGTGTGATCATCTTGGTGGGCCACCGTGGCTAAAATTTCCATaGACAACTCATGGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ITTRLKLSSLCDHLGGPPWLKFP*TTHGPA Trigger: AGCTGGGCCATGAGTTGTCAATGGAAATTTTAGCCA...CGGTGGCCCACCAAGATGATCACACAGTGAAGACAGTTTTAATCTGGTGGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR CAA 90 bp | CGAACTATTTCCAGCACCCCTTCTCTTGACGATTCCATCAAAGCCGTGCGTCCTATATCAGCTTTGGCCTaGGCTAAAATTTCCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: RTISSTPSLDDSIKAVRPISALA*AKISID Trigger: GTCAATGGAAATTTTAGCCAAGGCCAAAGCTGATAT...AGGACGCACGGCTTTGATGGAATCGTCAAGAGAAGGGGTGCTGGAAATAGTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGATTGTCATATCAGCTTaGGCCTTGGCTAAAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSPNFDSGPQSISPGRLLIVISA*ALAKIS Trigger: GGAAATTTTAGCCAAGGCCAAAGCTGATATGACAAT...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTGCTGAACGGAGTGGAGTTGTaGATTGATGTTGCATCTATT | + |
|
Preference number: 5 (lower is better) Translates to: LSPNFDSGPQSISPGRLLNGVEL*IDVASI Trigger: AATAGATGCAACATCAATCAACAACTCCACTCCGTT...CAGCAGCCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGTCTTCTCCTCTGTTATaGCTGGCACAGTGTAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: VLLSPNFDSGPQSISPGRSSPLL*LAQCKW Trigger: CCATTTACACTGTGCCAGCAATAACAGAGGAGAAGA...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CAA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGAGAGGCAAAACAAACTaGCCTTTCCTTGGCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLLSPNFDSGPQSISPGRRGKTN*PFLGFL Trigger: CAAAAAGCCAAGGAAAGGCAAGTTTGTTTTGCCTCT...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CAA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGGTGATATCAACTTTCTaGGTGAAGCCACTGGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: VLLSPNFDSGPQSISPGRVISTF*VKPLVI Trigger: GATTACCAGTGGCTTCACCAAGAAAGTTGATATCAC...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS GCA 90 bp | GGTACCCAAGCCTGGTCAGCTTTTCTATCTGCTTCTTGTCTTTGTTaGGAACACACTGAAGAACTCTGTAGATCTGTAAGTTCTCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GTQAWSAFLSASCLC*EHTEELCRSVSSQV Trigger: GACTTGAGAACTTACAGATCTACAGAGTTCTTCAGTGTGTTCGCAACAAAGACAAGAAGCAGATAGAAAAGCTGACCAGGCTTGGGTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGTTTTCTATCTGCTTCTaGTCTTTGTTGCGAACACAC | + |
|
Preference number: 5 (lower is better) Translates to: VLLSPNFDSGPQSISPGRFSICF*SLLRTH Trigger: GTGTGTTCGCAACAAAGACAAGAAGCAGATAGAAAA...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CAA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTGGATGCGCACCAAGTTaGAGGAGGAAGCTGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFGCAPS*RRKLTM Trigger: CATGGTCAGCTTCCTCCTCAAACTTGGTGCGCATCC...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | TGTCCACTGCAAAGGGACCAACAAACACCAAACCCGAAACCTGAAACCCAAAACATTGTCATATCAGCTTaGGCCTTGGCTAAAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPLQRDQQTPNPKPETQNIVISA*ALAKIS Trigger: GGAAATTTTAGCCAAGGCCAAAGCTGATATGACAAT...GTTTTGGGTTTCAGGTTTCGGGTTTGGTGTTTGTTGGTCCCTTTGCAGTGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR CAA 90 bp | AAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATCAAACTTGCCTTTCCTaGGCTTTTTGCCCAACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KNWPLITNSQWVNCFGFDQTCLS*AFCPTP Trigger: GGGGGTTGGGCAAAAAGCCAAGGAAAGGCAAGTTTG...ATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTTTGACCACATCAATGTaGCCACTGGCACACGCTATC | + |
|
Preference number: 5 (lower is better) Translates to: CCCKNWPLITNSQWVNCFLTTSM*PLAHAI Trigger: GATAGCGTGTGCCAGTGGCAACATTGATGTGGTCAA...AAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS TCA 90 bp | GTGGACTTTCTTCTCCTCTGTTATTGCTGGCACAGTGTAAATGGATaGCAGTGTTTCCTCTTCTTTCTTAACATCCGTGCCTTCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VDFLLLCYCWHSVNG*QCFLFFLNIRAFCL Trigger: AAGACAGAAGGCACGGATGTTAAGAAAGAAGAGGAAACACTGTCATCCATTTACACTGTGCCAGCAATAACAGAGGAGAAGAAAGTCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000180246.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCTGTTTCGATGGCCTTTTTCAGAGAGGCCAGATCTCCTGCTTTGGTGATATTTTCTATCTGCTTCTaGTCTTTGTTGCGAACACAC | + |
|
Preference number: 5 (lower is better) Translates to: IPVSMAFFREARSPALVIFSICF*SLLRTH Trigger: GTGTGTTCGCAACAAAGACAAGAAGCAGATAGAAAA...TATCACCAAAGCAGGAGATCTGGCCTCTCTGAAAAAGGCCATCGAAACAGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCAAACTTGGCTAAAATTTCCATaGACAACTCATGGCCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQWVNCFGFDGNTYFLQTWLKFP*TTHGPA Trigger: AGCTGGGCCATGAGTTGTCAATGGAAATTTTAGCCA...AGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | GTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCTGGGAGGCTTCATTATCAACTATaGTCATATCAGCTTTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLLSPNFDSGPQSISPGRLHYQL*SYQLWP Trigger: AGGCCAAAGCTGATATGACAATAGTTGATAATGAAG...CCTCCCAGGAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CAA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCCGTCCTGTGGATGTGTaGATAGCATTAGGATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLRPVDV*IALGLA Trigger: AGCCAATCCTAATGCTATCAACACATCCACAGGACG...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CAA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTAAGCTCAACAATGTCTaGCTGGCCAGCATGGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFKLNNV*LASMAC Trigger: GCATGCCATGCTGGCCAGCAAGACATTGTTGAGCTT...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCAAACTTCTTCTCCTCTGTTATaGCTGGCACAGTGTAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SQWVNCFGFDGNTYFLQTSSPLL*LAQCKW Trigger: CCATTTACACTGTGCCAGCAATAACAGAGGAGAAGA...AGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS CCA 90 bp | ACAGAACACCTTTTCCTTCATTATCAACTATTGTCATATCAGCTTTaGCCTTGGCTAAAATTTCCATTGACAACTCATGGCCCAGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TEHLFLHYQLLSYQL*PWLKFPLTTHGPAR Trigger: CCGAGCTGGGCCATGAGTTGTCAATGGAAATTTTAGCCAAGGCCAAAGCTGATATGACAATAGTTGATAATGAAGGAAAAGGTGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
||
| CDS-3UTR CAA 90 bp | CCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGCGTCCTGTGGATGTGTaGATAGCATTAGGATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLITNSQWVNCFGFDGNTRPVDV*IALGLA Trigger: AGCCAATCCTAATGCTATCAACACATCCACAGGACG...CGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGCTGCAAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGCGTGGTGTCTATCATaGTCATATGCGTTCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CCCKNWPLITNSQWVNCFAWCLS*SYAFTS Trigger: TGAAGTGAACGCATATGACAATGATAGACACCACGC...AAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTTGCAGCAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCAAACTGTGATATCAACTTTCTaGGTGAAGCCACTGGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: SQWVNCFGFDGNTYFLQTVISTF*VKPLVI Trigger: GATTACCAGTGGCTTCACCAAGAAAGTTGATATCAC...AGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCAAACTATTGTCATATCAGCTTaGGCCTTGGCTAAAATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQWVNCFGFDGNTYFLQTIVISA*ALAKIS Trigger: GGAAATTTTAGCCAAGGCCAAAGCTGATATGACAAT...AGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCAAACTGGACTCCAAATCCTTTaGGGGATAAATGTGATATCA | + |
|
Preference number: 5 (lower is better) Translates to: SQWVNCFGFDGNTYFLQTGLQIL*GINVIS Trigger: TGATATCACATTTATCCCCAAAAGGATTTGGAGTCC...AGTTTGGAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCATATCAGCTTTGGCCTaGGCTAAAATTTCCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLISALA*AKISID Trigger: GTCAATGGAAATTTTAGCCAAGGCCAAAGCTGATAT...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CAA 90 bp | ACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCATATCAGCTTTGGCCTaGGCTAAAATTTCCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TNSQWVNCFGFDGNTYFLISALA*AKISID Trigger: GTCAATGGAAATTTTAGCCAAGGCCAAAGCTGATAT...GAGAAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGAGAGGCAAAACAAACTaGCCTTTCCTTGGCTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLITNSQWVNCFGFDGNTRGKTN*PFLGFL Trigger: CAAAAAGCCAAGGAAAGGCAAGTTTGTTTTGCCTCT...CGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCTTTTCAATCTGGAATTaGGCACCCATATCAAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLFSIWN*APISSR Trigger: CCTACTTGATATGGGTGCCAAATTCCAGATTGAAAA...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CAA 90 bp | TCTTCAAAGTCTTACTTTCTCCAAACTTTGACTCTGGGCCACAGAGTATTTCTCGGACTCCAAATCCTTTaGGGGATAAATGTGATATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSKSYFLQTLTLGHRVFLGLQIL*GINVIS Trigger: TGATATCACATTTATCCCCAAAAGGATTTGGAGTCC...GAGAAATACTCTGTGGCCCAGAGTCAAAGTTTGGAGAAAGTAAGACTTTGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028726.9 |
||
| CDS-3UTR CAA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTCTCCGTGATGTTCTTTaGGAAAGGCATCATGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFLRDVL*ERHHEV Trigger: GACTTCATGATGCCTTTCCAAAAGAACATCACGGAG...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | AAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATTTTTCAATCTGGAATTaGGCACCCATATCAAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KNWPLITNSQWVNCFGFDFSIWN*APISSR Trigger: CCTACTTGATATGGGTGCCAAATTCCAGATTGAAAA...ATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | ATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATGGAAATACGTACTTTTTTTCTATCTGCTTCTaGTCTTTGTTGCGAACACAC | + |
|
Preference number: 5 (lower is better) Translates to: ITNSQWVNCFGFDGNTYFFSICF*SLLRTH Trigger: GTGTGTTCGCAACAAAGACAAGAAGCAGATAGAAAA...AAAGTACGTATTTCCATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAAT 38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS-3UTR CAA 90 bp | AAGAACTGGCCTTTAATTACAAATTCTCAGTGGGTGAACTGCTTTGGCTTTGATCTTCATTATCAACTATaGTCATATCAGCTTTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KNWPLITNSQWVNCFGFDLHYQL*SYQLWP Trigger: AGGCCAAAGCTGATATGACAATAGTTGATAATGAAG...ATCAAAGCCAAAGCAGTTCACCCACTGAGAATTTGTAATTAAAGGCCAGTTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121717.2 |
||
| CDS CCA 90 bp | TCATATCAATTATTCTATAATCAGCATATGCCTTTGCAATATCCATaGCAGCATGTCCTTTTCTGTTTTCAATCTGGAATTTGGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: SYQLFYNQHMPLQYP*QHVLFCFQSGIWHP Trigger: TGGGTGCCAAATTCCAGATTGAAAACAGAAAAGGACATGCTGCCATGGATATTGCAAAGGCATATGCTGATTATAGAATAATTGATATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000180246.8 |
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| CDS-3UTR CAA 90 bp | GTCCTCCATAAAAGAGGCCAATTAAAATATTACTCCACACCATCTTATCATCTACTTCATTATCAACTATaGTCATATCAGCTTTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: VLHKRGQLKYYSTPSYHLLHYQL*SYQLWP Trigger: AGGCCAAAGCTGATATGACAATAGTTGATAATGAAG...TAGATGATAAGATGGTGTGGAGTAATATTTTAATTGGCCTCTTTTATGGAGGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149712.8 |
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| CDS CAA 90 bp | GCCCAGCTCGGCAGCTCTCATGGTCGGGGTACAGCCCATGTGGTCTaGCACATCAGGATGCGCACCAAGTTTGAGGAGGAAGCTGACCAT | + |
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Preference number: 6 (lower is better) Translates to: AQLGSSHGRGTAHVV*HIRMRTKFEEEADH Trigger: ATGGTCAGCTTCCTCCTCAAACTTGGTGCGCATCCTGATGTGCAAGACCACATGGGCTGTACCCCGACCATGAGAGCTGCCGAGCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS CCA 72 bp | AGCTCGGCAGCTCTCATGGTCGGGGTACAGCCCATGTaGTCTTGCACATCAGGATGCGCACCAAGTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSAALMVGVQPM*SCTSGCAPSLR Trigger: CCTCAAACTTGGTGCGCATCCTGATGTGCAAGACCACATGGGCTGTACCCCGACCATGAGAGCTGCCGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS CCA 72 bp | CCATTGACAACTCATGGCCCAGCTCGGCAGCTCTCATaGTCGGGGTACAGCCCATGTGGTCTTGCACATCAG | + |
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Preference number: 6 (lower is better) Translates to: PLTTHGPARQLS*SGYSPCGLAHQ Trigger: CTGATGTGCAAGACCACATGGGCTGTACCCCGACCATGAGAGCTGCCGAGCTGGGCCATGAGTTGTCAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS GCA 72 bp | GTCGGGGTACAGCCCATGTGGTCTTGCACATCAGGATaGGCACCAAGTTTGAGGAGGAAGCTGACCATGTCA | + |
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Preference number: 6 (lower is better) Translates to: VGVQPMWSCTSG*APSLRRKLTMS Trigger: TGACATGGTCAGCTTCCTCCTCAAACTTGGTGCGCATCCTGATGTGCAAGACCACATGGGCTGTACCCCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS CAA 90 bp | GGGGTACAGCCCATGTGGTCTTGCACATCAGGATGCGCACCAAGTTaGAGGAGGAAGCTGACCATGTCAGTGTCGTTGGAAATGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: GVQPMWSCTSGCAPS*RRKLTMSVSLEMEA Trigger: AGCCTCCATTTCCAACGACACTGACATGGTCAGCTTCCTCCTCAAACTTGGTGCGCATCCTGATGTGCAAGACCACATGGGCTGTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS CCA 72 bp | GCTTTGGCCTTGGCTAAAATTTCCATTGACAACTCATaGCCCAGCTCGGCAGCTCTCATGGTCGGGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: ALALAKISIDNS*PSSAALMVGVQ Trigger: CTGTACCCCGACCATGAGAGCTGCCGAGCTGGGCCATGAGTTGTCAATGGAAATTTTAGCCAAGGCCAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS CCA 72 bp | CTGACCATGTCAGTGTCGTTGGAAATGGAGGCTAAGTaGAGAGCACTCAGCCCATCTATGGGTTCGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LTMSVSLEMEAK*RALSPSMGSVK Trigger: CTTCACCGAACCCATAGATGGGCTGAGTGCTCTCCACTTAGCCTCCATTTCCAACGACACTGACATGGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS CAA 90 bp | GAGGCTAAGTGGAGAGCACTCAGCCCATCTATGGGTTCGGTGAAGTaGATTAGCTCAGGGTACCCAAGCCTGGTCAGCTTTTCTATCTGC | + |
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Preference number: 6 (lower is better) Translates to: EAKWRALSPSMGSVK*ISSGYPSLVSFSIC Trigger: GCAGATAGAAAAGCTGACCAGGCTTGGGTACCCTGAGCTAATCAACTTCACCGAACCCATAGATGGGCTGAGTGCTCTCCACTTAGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS TCA 72 bp | ATTGTTGACATCTGCACCATGCTCCAAGGCAATCAGTaGGCATCGATAGTGCCGCTTAGTGGGCAGGATGCA | + |
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Preference number: 6 (lower is better) Translates to: IVDICTMLQGNQ*ASIVPLSGQDA Trigger: TGCATCCTGCCCACTAAGCGGCACTATCGATGCTCACTGATTGCCTTGGAGCATGGTGCAGATGTCAACAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS CAA 72 bp | CCAATATGCCACGAACTATTTCCAGCACCCCTTCTCTaGACGATTCCATCAAAGCCGTGCGTCCTGTGGATG | + |
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Preference number: 6 (lower is better) Translates to: PICHELFPAPLL*TIPSKPCVLWM Trigger: CATCCACAGGACGCACGGCTTTGATGGAATCGTCAAGAGAAGGGGTGCTGGAAATAGTTCGTGGCATATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000180246.8 |
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| CDS TCA 72 bp | CAATATGCCACGAACTATTTCCAGCACCCCTTCTCTTaGCGATTCCATCAAAGCCGTGCGTCCTGTGGATGT | + |
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Preference number: 6 (lower is better) Translates to: QYATNYFQHPFS*RFHQSRASCGC Trigger: ACATCCACAGGACGCACGGCTTTGATGGAATCGTCAAGAGAAGGGGTGCTGGAAATAGTTCGTGGCATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000180246.8 |
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| CDS GCA 72 bp | CTCCAAAAATGTCAGGCACATATCCTTCACATCATGTaGTTCCTCGCAAGCTCTGAGGAACACTGGCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LQKCQAHILHIM*FLASSEEHWLP Trigger: GGGAAGCCAGTGTTCCTCAGAGCTTGCGAGGAAGCACATGATGTGAAGGATATGTGCCTGACATTTTTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS CCA 72 bp | CACATCATGTGCTTCCTCGCAAGCTCTGAGGAACACTaGCTTCCCTTCATAGGTGATATTGTTGACATCTGC | + |
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Preference number: 6 (lower is better) Translates to: HIMCFLASSEEH*LPFIGDIVDIC Trigger: GCAGATGTCAACAATATCACCTATGAAGGGAAGCCAGTGTTCCTCAGAGCTTGCGAGGAAGCACATGATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS CAA 72 bp | GCCCCCTTTTCGATAAGAAACTTGACCACATCAATGTaGCCACTGGCACACGCTATCATGAGAGGAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: APFSIRNLTTSM*PLAHAIMRGVL Trigger: CAAGACTCCTCTCATGATAGCGTGTGCCAGTGGCAACATTGATGTGGTCAAGTTTCTTATCGAAAAGGGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000180246.8 |
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| CDS CAA 72 bp | TGCCTCCAGTGCCTGAGCTTTCTCCGTGATGTTCTTTaGGAAAGGCATCATGAAGTCTTCAAAGTCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: CLQCLSFLRDVL*ERHHEVFKVHL Trigger: GAGGTGGACTTTGAAGACTTCATGATGCCTTTCCAAAAGAACATCACGGAGAAAGCTCAGGCACTGGAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000180246.8 |
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| CDS CAA 90 bp | CTTGAGTGTTGCCTCCAGTGCCTGAGCTTTCTCCGTGATGTTCTTTaGGAAAGGCATCATGAAGTCTTCAAAGTCCACCTCGTATGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LECCLQCLSFLRDVL*ERHHEVFKVHLVCE Trigger: TTCACATACGAGGTGGACTTTGAAGACTTCATGATGCCTTTCCAAAAGAACATCACGGAGAAAGCTCAGGCACTGGAGGCAACACTCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000180246.8 |
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| CDS CAA 72 bp | GACGATTCCATCAAAGCCGTGCGTCCTGTGGATGTGTaGATAGCATTAGGATTGGCTCCTTTCTCCAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: DDSIKAVRPVDV*IALGLAPFSKN Trigger: ATTTTTGGAGAAAGGAGCCAATCCTAATGCTATCAACACATCCACAGGACGCACGGCTTTGATGGAATCGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000180246.8 |
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| CDS CAA 90 bp | TCCAGCCTACAGCTTTCAATGGCTCTGCTTAACGGAGTGGAGTTGTaGATTGATGTTGCATCTATTGAAGCTCCAGCTTTAACAAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSLQLSMALLNGVEL*IDVASIEAPALTRS Trigger: GCTTCTTGTTAAAGCTGGAGCTTCAATAGATGCAACATCAATCAACAACTCCACTCCGTTAAGCAGAGCCATTGAAAGCTGTAGGCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000180246.8 |
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| CDS CAA 90 bp | GTGTCCAGCCTACAGCTTTCAATGGCTCTGCTTAACGGAGTGGAGTaGTTGATTGATGTTGCATCTATTGAAGCTCCAGCTTTAACAAGA | + |
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Preference number: 6 (lower is better) Translates to: VSSLQLSMALLNGVE*LIDVASIEAPALTR Trigger: TCTTGTTAAAGCTGGAGCTTCAATAGATGCAACATCAATCAACAACTCCACTCCGTTAAGCAGAGCCATTGAAAGCTGTAGGCTGGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000180246.8 |
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| CDS TCA 72 bp | CTTCTCCTCTGTTATTGCTGGCACAGTGTAAATGGATaGCAGTGTTTCCTCTTCTTTCTTAACATCCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LLLCYCWHSVNG*QCFLFFLNIRA Trigger: GGCACGGATGTTAAGAAAGAAGAGGAAACACTGTCATCCATTTACACTGTGCCAGCAATAACAGAGGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000180246.8 |
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| CDS CAA 72 bp | CTACAGCTTTCAATGGCTCTGCTTAACGGAGTGGAGTaGTTGATTGATGTTGCATCTATTGAAGCTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LQLSMALLNGVE*LIDVASIEAPA Trigger: AGCTGGAGCTTCAATAGATGCAACATCAATCAACAACTCCACTCCGTTAAGCAGAGCCATTGAAAGCTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000180246.8 |
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| CDS CAA 90 bp | ACACCTTTTCCTTCATTATCAACTATTGTCATATCAGCTTTGGCCTaGGCTAAAATTTCCATTGACAACTCATGGCCCAGCTCGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: TPFPSLSTIVISALA*AKISIDNSWPSSAA Trigger: AGCTGCCGAGCTGGGCCATGAGTTGTCAATGGAAATTTTAGCCAAGGCCAAAGCTGATATGACAATAGTTGATAATGAAGGAAAAGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS GCA 72 bp | GCCTGGTCAGCTTTTCTATCTGCTTCTTGTCTTTGTTaGGAACACACTGAAGAACTCTGTAGATCTGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: AWSAFLSASCLC*EHTEELCRSVS Trigger: ACTTACAGATCTACAGAGTTCTTCAGTGTGTTCGCAACAAAGACAAGAAGCAGATAGAAAAGCTGACCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS CAA 72 bp | CAGCTTTCAATGGCTCTGCTTAACGGAGTGGAGTTGTaGATTGATGTTGCATCTATTGAAGCTCCAGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: QLSMALLNGVEL*IDVASIEAPAL Trigger: TAAAGCTGGAGCTTCAATAGATGCAACATCAATCAACAACTCCACTCCGTTAAGCAGAGCCATTGAAAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000180246.8 |
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| CDS CAA 90 bp | AACAGAACACCTTTTCCTTCATTATCAACTATTGTCATATCAGCTTaGGCCTTGGCTAAAATTTCCATTGACAACTCATGGCCCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: NRTPFPSLSTIVISA*ALAKISIDNSWPSS Trigger: CGAGCTGGGCCATGAGTTGTCAATGGAAATTTTAGCCAAGGCCAAAGCTGATATGACAATAGTTGATAATGAAGGAAAAGGTGTTCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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| CDS CAA 72 bp | CCTTTTCCTTCATTATCAACTATTGTCATATCAGCTTaGGCCTTGGCTAAAATTTCCATTGACAACTCATGG | + |
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Preference number: 6 (lower is better) Translates to: PFPSLSTIVISA*ALAKISIDNSW Trigger: CCATGAGTTGTCAATGGAAATTTTAGCCAAGGCCAAAGCTGATATGACAATAGTTGATAATGAAGGAAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000028726.9 ENSMUST00000121717.2 ENSMUST00000123214.8 ENSMUST00000149712.8 ENSMUST00000180246.8 |
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