Pregenerated sensors for ANKDD1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066510Ensembl transcript IDs: ENSMUST00000061766.6, ENSMUST00000217646.2
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCCACGAGGCCCTCGAACAGTGCTTTGCTGGGGTTCTCCCCAGCTaGGGCCACACCATGCAGCCAGATGAGCAGCATCCGGTGACCATG | + |
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Preference number: 5 (lower is better) Translates to: GHEALEQCFAGVLPS*GHTMQPDEQHPVTM Trigger: CATGGTCACCGGATGCTGCTCATCTGGCTGCATGGTGTGGCCGCAGCTGGGGAGAACCCCAGCAAAGCACTGTTCGAGGGCCTCGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | GCCCTGCTTGTCAGCCACATTTGTGCACCCTCCTGCCTTAATGAGTaGCCGGGACAGGTCCTCAGAGCCACCGAGGGCTGCGTAGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: ALLVSHICAPSCLNE*PGQVLRATEGCVVE Trigger: CTCCACTACGCAGCCCTCGGTGGCTCTGAGGACCTGTCCCGGGCACTCATTAAGGCAGGAGGGTGCACAAATGTGGCTGACAAGCAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS TCA 90 bp | AGCCACCGAGGGCTGCGTAGTGGAGGCAGCTCAGCCTTTTCTGGGTaGGGGCATTCACGTTGCTCCCAGCACCGAGGAGAAGCATCACAC | + |
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Preference number: 5 (lower is better) Translates to: SHRGLRSGGSSAFSG*GHSRCSQHRGEASH Trigger: GTGTGATGCTTCTCCTCGGTGCTGGGAGCAACGTGAATGCCCTCACCCAGAAAAGGCTGAGCTGCCTCCACTACGCAGCCCTCGGTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | GCTACATCCTGCCAGGCGTGCTCAGCGGCAAGGTGGAGGGGAGTCTaGCGCCTAATGTCCACTGCGTCCAGATCACTGTGGCCATCTATG | + |
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Preference number: 5 (lower is better) Translates to: ATSCQACSAARWRGV*RLMSTASRSLWPSM Trigger: CATAGATGGCCACAGTGATCTGGACGCAGTGGACATTAGGCGGCAGACTCCCCTCCACCTTGCCGCTGAGCACGCCTGGCAGGATGTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 90 bp | TTCACGTTGCTCCCAGCACCGAGGAGAAGCATCACACAGTCAGCATaGATCCCTTCAGCGGCTGCATGCAGAGCCGTCAGGCCCTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: FTLLPAPRRSITQSA*IPSAAACRAVRPSV Trigger: CACGGAGGGCCTGACGGCTCTGCATGCAGCCGCTGAAGGGATCCATGCTGACTGTGTGATGCTTCTCCTCGGTGCTGGGAGCAACGTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | ACAAGTCTCTGTAGCACATCCACATGGCCCTGGCTGGCAGCCAGGTaGAGGGCCGTGTTCCCACCCTTGTCCTTGACACTGTGGTCACAG | + |
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Preference number: 5 (lower is better) Translates to: TSLCSTSTWPWLAAR*RAVFPPLSLTLWSQ Trigger: CTGTGACCACAGTGTCAAGGACAAGGGTGGGAACACGGCCCTGCACCTGGCTGCCAGCCAGGGCCATGTGGATGTGCTACAGAGACTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 90 bp | AGAAGCATATCGGCTACATCCTGCCAGGCGTGCTCAGCGGCAAGGTaGAGGGGAGTCTGCCGCCTAATGTCCACTGCGTCCAGATCACTG | + |
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Preference number: 5 (lower is better) Translates to: RSISATSCQACSAAR*RGVCRLMSTASRSL Trigger: CAGTGATCTGGACGCAGTGGACATTAGGCGGCAGACTCCCCTCCACCTTGCCGCTGAGCACGCCTGGCAGGATGTAGCCGATATGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | TCAGCTCCAGCAATGAGAAGCATATCGGCTACATCCTGCCAGGCGTaGTCAGCGGCAAGGTGGAGGGGAGTCTGCCGCCTAATGTCCACT | + |
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Preference number: 5 (lower is better) Translates to: SAPAMRSISATSCQA*SAARWRGVCRLMST Trigger: AGTGGACATTAGGCGGCAGACTCCCCTCCACCTTGCCGCTGAGCACGCCTGGCAGGATGTAGCCGATATGCTTCTCATTGCTGGAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | AGGCTTAAGTCAGCTCCAGCAATGAGAAGCATATCGGCTACATCCTaGCAGGCGTGCTCAGCGGCAAGGTGGAGGGGAGTCTGCCGCCTA | + |
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Preference number: 5 (lower is better) Translates to: RLKSAPAMRSISATS*QACSAARWRGVCRL Trigger: TAGGCGGCAGACTCCCCTCCACCTTGCCGCTGAGCACGCCTGGCAGGATGTAGCCGATATGCTTCTCATTGCTGGAGCTGACTTAAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS TCA 90 bp | ACGAGGAAGTCCAGAGCATCCAGCTGTCCGTGCTCAGCCGCTCTGTaGAACGCTGTTCTTCCCAGCTTGTCTGCATGGTCCAAGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: TRKSRASSCPCSAAL*NAVLPSLSAWSKAT Trigger: TGTGGCCTTGGACCATGCAGACAAGCTGGGAAGAACAGCGTTTCACAGAGCGGCTGAGCACGGACAGCTGGATGCTCTGGACTTCCTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | AGGAGAAGCATCACACAGTCAGCATGGATCCCTTCAGCGGCTGCATaGAGAGCCGTCAGGCCCTCCGTGTTCTGTTCTTCCAGATCGAGC | + |
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Preference number: 5 (lower is better) Translates to: RRSITQSAWIPSAAA*RAVRPSVFCSSRSS Trigger: GCTCGATCTGGAAGAACAGAACACGGAGGGCCTGACGGCTCTGCATGCAGCCGCTGAAGGGATCCATGCTGACTGTGTGATGCTTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | ACCGAGGAGAAGCATCACACAGTCAGCATGGATCCCTTCAGCGGCTaGATGCAGAGCCGTCAGGCCCTCCGTGTTCTGTTCTTCCAGATC | + |
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Preference number: 5 (lower is better) Translates to: TEEKHHTVSMDPFSG*MQSRQALRVLFFQI Trigger: GATCTGGAAGAACAGAACACGGAGGGCCTGACGGCTCTGCATGCAGCCGCTGAAGGGATCCATGCTGACTGTGTGATGCTTCTCCTCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 90 bp | TGGAGGGGAGTCTGCCGCCTAATGTCCACTGCGTCCAGATCACTGTaGCCATCTATGAGGAGCTGGACAAGGCCAGGGAAGTTGTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: WRGVCRLMSTASRSL*PSMRSWTRPGKLCF Trigger: GAAGCACAACTTCCCTGGCCTTGTCCAGCTCCTCATAGATGGCCACAGTGATCTGGACGCAGTGGACATTAGGCGGCAGACTCCCCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS TCA 90 bp | GATCTGCACAATCTGCAAGTGGCCAAACCAGGCAGACAGGAGGAGTaGGTTCATTCCAAACGAGTCCACGTCGTCCACAGCAGCCCCACG | + |
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Preference number: 5 (lower is better) Translates to: DLHNLQVAKPGRQEE*VHSKRVHVVHSSPT Trigger: CGTGGGGCTGCTGTGGACGACGTGGACTCGTTTGGAATGAACTCACTCCTCCTGTCTGCCTGGTTTGGCCACTTGCAGATTGTGCAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | TCACTGTGGCCATCTATGAGGAGCTGGACAAGGCCAGGGAAGTTGTaGTTCACAGCAAGGTGCATAGGAGTGGTGCCCTGCTTGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SLWPSMRSWTRPGKL*FTARCIGVVPCLSA Trigger: GGCTGACAAGCAGGGCACCACTCCTATGCACCTTGCTGTGAAGCACAACTTCCCTGGCCTTGTCCAGCTCCTCATAGATGGCCACAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | TCCTTGCTTTCACAGTGGACCTTGGCCCCAGCATTGACCAGGATCTaGACAATCTGCAAGTGGCCAAACCAGGCAGACAGGAGGAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SLLSQWTLAPALTRI*TICKWPNQADRRSE Trigger: CTCACTCCTCCTGTCTGCCTGGTTTGGCCACTTGCAGATTGTGCAGATCCTGGTCAATGCTGGGGCCAAGGTCCACTGTGAAAGCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | CCAGGGAAGTTGTGCTTCACAGCAAGGTGCATAGGAGTGGTGCCCTaGTTGTCAGCCACATTTGTGCACCCTCCTGCCTTAATGAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: PGKLCFTARCIGVVP*LSATFVHPPALMSA Trigger: GGCACTCATTAAGGCAGGAGGGTGCACAAATGTGGCTGACAAGCAGGGCACCACTCCTATGCACCTTGCTGTGAAGCACAACTTCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | ATGAGGAGCTGGACAAGGCCAGGGAAGTTGTGCTTCACAGCAAGGTaGATAGGAGTGGTGCCCTGCTTGTCAGCCACATTTGTGCACCCT | + |
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Preference number: 5 (lower is better) Translates to: MRSWTRPGKLCFTAR*IGVVPCLSATFVHP Trigger: AGGGTGCACAAATGTGGCTGACAAGCAGGGCACCACTCCTATGCACCTTGCTGTGAAGCACAACTTCCCTGGCCTTGTCCAGCTCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 90 bp | TCGTGCCCAGCACCTGCAGCCCAGTGTAGGGCCACTCTGCCCACATaGTTTCTAGCCCTGATGTTAACTCTCTTCTCAAACAGCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SCPAPAAQCRATLPT*FLALMLTLFSNSSF Trigger: GAAGGAGCTGTTTGAGAAGAGAGTTAACATCAGGGCTAGAAACCATGTGGGCAGAGTGGCCCTACACTGGGCTGCAGGTGCTGGGCACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS TCA 90 bp | CTGATGTTAACTCTCTTCTCAAACAGCTCCTTCATCCTCTCCACCTaGTTCCAGCGGGAGGCCTCATGGAGCTGTCTCTCCAGGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: LMLTLFSNSSFILST*FQREASWSCLSRGS Trigger: GCTTCCCCTGGAGAGACAGCTCCATGAGGCCTCCCGCTGGAATCAGGTGGAGAGGATGAAGGAGCTGTTTGAGAAGAGAGTTAACATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS TCA 90 bp | TCTAGGTCTTCCATGACGAAGGCCAGCACAGGCACGTGGCCTTTCTaGGCAGCACAGTGTAGTAAGGTCAGGCCATCCTTGCTTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: SRSSMTKASTGTWPF*AAQCSKVRPSLLSQ Trigger: CTGTGAAAGCAAGGATGGCCTGACCTTACTACACTGTGCTGCTCAGAAAGGCCACGTGCCTGTGCTGGCCTTCGTCATGGAAGACCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 90 bp | TCACAGTGGACCTTGGCCCCAGCATTGACCAGGATCTGCACAATCTaGAAGTGGCCAAACCAGGCAGACAGGAGGAGTGAGTTCATTCCA | + |
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Preference number: 5 (lower is better) Translates to: SQWTLAPALTRICTI*KWPNQADRRSEFIP Trigger: TGGAATGAACTCACTCCTCCTGTCTGCCTGGTTTGGCCACTTGCAGATTGTGCAGATCCTGGTCAATGCTGGGGCCAAGGTCCACTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 90 bp | TGGACCTTGGCCCCAGCATTGACCAGGATCTGCACAATCTGCAAGTaGCCAAACCAGGCAGACAGGAGGAGTGAGTTCATTCCAAACGAG | + |
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Preference number: 5 (lower is better) Translates to: WTLAPALTRICTICK*PNQADRRSEFIPNE Trigger: CTCGTTTGGAATGAACTCACTCCTCCTGTCTGCCTGGTTTGGCCACTTGCAGATTGTGCAGATCCTGGTCAATGCTGGGGCCAAGGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 90 bp | CTAATGTCCACTGCGTCCAGATCACTGTGGCCATCTATGAGGAGCTaGACAAGGCCAGGGAAGTTGTGCTTCACAGCAAGGTGCATAGGA | + |
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Preference number: 5 (lower is better) Translates to: LMSTASRSLWPSMRS*TRPGKLCFTARCIG Trigger: TCCTATGCACCTTGCTGTGAAGCACAACTTCCCTGGCCTTGTCCAGCTCCTCATAGATGGCCACAGTGATCTGGACGCAGTGGACATTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS TCA 90 bp | CTGTTTTTCCTTGCTTATCTCTCAGGCTTAAGTCAGCTCCAGCAATaGGAAGCATATCGGCTACATCCTGCCAGGCGTGCTCAGCGGCAA | + |
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Preference number: 5 (lower is better) Translates to: LFFLAYLSGLSQLQQ*EAYRLHPARRAQRQ Trigger: TTGCCGCTGAGCACGCCTGGCAGGATGTAGCCGATATGCTTCTCATTGCTGGAGCTGACTTAAGCCTGAGAGATAAGCAAGGAAAAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | GAGTGCCCGGGACAGGTCCTCAGAGCCACCGAGGGCTaGGTAGTGGAGGCAGCTCAGCCTTTTCTGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: ECPGQVLRATEG*VVEAAQPFLGE Trigger: CTCACCCAGAAAAGGCTGAGCTGCCTCCACTACGCAGCCCTCGGTGGCTCTGAGGACCTGTCCCGGGCACTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | GTCTCTCCTGCCAATGGCCACGAGGCCCTCGAACAGTaGTTTGCTGGGGTTCTCCCCAGCTGCGGCCACACC | + |
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Preference number: 6 (lower is better) Translates to: VSPANGHEALEQ*FAGVLPSCGHT Trigger: GGTGTGGCCGCAGCTGGGGAGAACCCCAGCAAAGCACTGTTCGAGGGCCTCGTGGCCATTGGCAGGAGAGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 72 bp | TCGGCTACATCCTGCCAGGCGTGCTCAGCGGCAAGGTaGAGGGGAGTCTGCCGCCTAATGTCCACTGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: SATSCQACSAAR*RGVCRLMSTAS Trigger: GGACGCAGTGGACATTAGGCGGCAGACTCCCCTCCACCTTGCCGCTGAGCACGCCTGGCAGGATGTAGCCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CAA 90 bp | ACATGGCCCTGGCTGGCAGCCAGGTGCAGGGCCGTGTTCCCACCCTaGTCCTTGACACTGTGGTCACAGCCAGAGCCCACGAGGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TWPWLAARCRAVFPP*SLTLWSQPEPTRKS Trigger: GGACTTCCTCGTGGGCTCTGGCTGTGACCACAGTGTCAAGGACAAGGGTGGGAACACGGCCCTGCACCTGGCTGCCAGCCAGGGCCATGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | TGCCAGGCGTGCTCAGCGGCAAGGTGGAGGGGAGTCTaGCGCCTAATGTCCACTGCGTCCAGATCACTGTGG | + |
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Preference number: 6 (lower is better) Translates to: CQACSAARWRGV*RLMSTASRSLW Trigger: CCACAGTGATCTGGACGCAGTGGACATTAGGCGGCAGACTCCCCTCCACCTTGCCGCTGAGCACGCCTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | GCCCTCGAACAGTGCTTTGCTGGGGTTCTCCCCAGCTaGGGCCACACCATGCAGCCAGATGAGCAGCATCCG | + |
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Preference number: 6 (lower is better) Translates to: ALEQCFAGVLPS*GHTMQPDEQHP Trigger: CGGATGCTGCTCATCTGGCTGCATGGTGTGGCCGCAGCTGGGGAGAACCCCAGCAAAGCACTGTTCGAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | GTCAGCCACATTTGTGCACCCTCCTGCCTTAATGAGTaGCCGGGACAGGTCCTCAGAGCCACCGAGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VSHICAPSCLNE*PGQVLRATEGC Trigger: GCAGCCCTCGGTGGCTCTGAGGACCTGTCCCGGGCACTCATTAAGGCAGGAGGGTGCACAAATGTGGCTGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | GGTGCCCTGCTTGTCAGCCACATTTGTGCACCCTCCTaGCTTAATGAGTGCCCGGGACAGGTCCTCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GALLVSHICAPS*LNECPGQVLRA Trigger: GGCTCTGAGGACCTGTCCCGGGCACTCATTAAGGCAGGAGGGTGCACAAATGTGGCTGACAAGCAGGGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | GCAATGAGAAGCATATCGGCTACATCCTGCCAGGCGTaGTCAGCGGCAAGGTGGAGGGGAGTCTGCCGCCTA | + |
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Preference number: 6 (lower is better) Translates to: AMRSISATSCQA*SAARWRGVCRL Trigger: TAGGCGGCAGACTCCCCTCCACCTTGCCGCTGAGCACGCCTGGCAGGATGTAGCCGATATGCTTCTCATTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 72 bp | CTCCCAGCACCGAGGAGAAGCATCACACAGTCAGCATaGATCCCTTCAGCGGCTGCATGCAGAGCCGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LPAPRRSITQSA*IPSAAACRAVR Trigger: CCTGACGGCTCTGCATGCAGCCGCTGAAGGGATCCATGCTGACTGTGTGATGCTTCTCCTCGGTGCTGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | GGCAAGGTGGAGGGGAGTCTGCCGCCTAATGTCCACTaGGTCCAGATCACTGTGGCCATCTATGAGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GKVEGSLPPNVH*VQITVAIYEEL Trigger: CAGCTCCTCATAGATGGCCACAGTGATCTGGACGCAGTGGACATTAGGCGGCAGACTCCCCTCCACCTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | TCAGCTCCAGCAATGAGAAGCATATCGGCTACATCCTaGCAGGCGTGCTCAGCGGCAAGGTGGAGGGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SAPAMRSISATS*QACSAARWRGV Trigger: GACTCCCCTCCACCTTGCCGCTGAGCACGCCTGGCAGGATGTAGCCGATATGCTTCTCATTGCTGGAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS TCA 72 bp | TCCAGAGCATCCAGCTGTCCGTGCTCAGCCGCTCTGTaGAACGCTGTTCTTCCCAGCTTGTCTGCATGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SRASSCPCSAAL*NAVLPSLSAWS Trigger: GGACCATGCAGACAAGCTGGGAAGAACAGCGTTTCACAGAGCGGCTGAGCACGGACAGCTGGATGCTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | ATCACACAGTCAGCATGGATCCCTTCAGCGGCTGCATaGAGAGCCGTCAGGCCCTCCGTGTTCTGTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ITQSAWIPSAAA*RAVRPSVFCSS Trigger: GGAAGAACAGAACACGGAGGGCCTGACGGCTCTGCATGCAGCCGCTGAAGGGATCCATGCTGACTGTGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | AAGCATCACACAGTCAGCATGGATCCCTTCAGCGGCTaGATGCAGAGCCGTCAGGCCCTCCGTGTTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: KHHTVSMDPFSG*MQSRQALRVLF Trigger: GAACAGAACACGGAGGGCCTGACGGCTCTGCATGCAGCCGCTGAAGGGATCCATGCTGACTGTGTGATGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 72 bp | GTCTGCCGCCTAATGTCCACTGCGTCCAGATCACTGTaGCCATCTATGAGGAGCTGGACAAGGCCAGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: VCRLMSTASRSL*PSMRSWTRPGK Trigger: CTTCCCTGGCCTTGTCCAGCTCCTCATAGATGGCCACAGTGATCTGGACGCAGTGGACATTAGGCGGCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CAA 90 bp | GGGAAGTTGTGCTTCACAGCAAGGTGCATAGGAGTGGTGCCCTGCTaGTCAGCCACATTTGTGCACCCTCCTGCCTTAATGAGTGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: GKLCFTARCIGVVPC*SATFVHPPALMSAR Trigger: CCGGGCACTCATTAAGGCAGGAGGGTGCACAAATGTGGCTGACAAGCAGGGCACCACTCCTATGCACCTTGCTGTGAAGCACAACTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS TCA 72 bp | TCCATGACGAAGGCCAGCACAGGCACGTGGCCTTTCTaGGCAGCACAGTGTAGTAAGGTCAGGCCATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SMTKASTGTWPF*AAQCSKVRPSL Trigger: CAAGGATGGCCTGACCTTACTACACTGTGCTGCTCAGAAAGGCCACGTGCCTGTGCTGGCCTTCGTCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | ACCTTGGCCCCAGCATTGACCAGGATCTGCACAATCTaGAAGTGGCCAAACCAGGCAGACAGGAGGAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: TLAPALTRICTI*KWPNQADRRSE Trigger: CTCACTCCTCCTGTCTGCCTGGTTTGGCCACTTGCAGATTGTGCAGATCCTGGTCAATGCTGGGGCCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS GCA 72 bp | CCATCTATGAGGAGCTGGACAAGGCCAGGGAAGTTGTaGTTCACAGCAAGGTGCATAGGAGTGGTGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSMRSWTRPGKL*FTARCIGVVPC Trigger: GCAGGGCACCACTCCTATGCACCTTGCTGTGAAGCACAACTTCCCTGGCCTTGTCCAGCTCCTCATAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 72 bp | TATTCCTGGTGCTTTCAGCCAAGTCTCTCCTGCCAATaGCCACGAGGCCCTCGAACAGTGCTTTGCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: YSWCFQPSLSCQ*PRGPRTVLCWG Trigger: ACCCCAGCAAAGCACTGTTCGAGGGCCTCGTGGCCATTGGCAGGAGAGACTTGGCTGAAAGCACCAGGAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CAA 72 bp | AGGCAGCTCAGCCTTTTCTGGGTGAGGGCATTCACGTaGCTCCCAGCACCGAGGAGAAGCATCACACAGTCA | + |
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Preference number: 6 (lower is better) Translates to: RQLSLFWVRAFT*LPAPRRSITQS Trigger: TGACTGTGTGATGCTTCTCCTCGGTGCTGGGAGCAACGTGAATGCCCTCACCCAGAAAAGGCTGAGCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS TCA 72 bp | ACTCTCTTCTCAAACAGCTCCTTCATCCTCTCCACCTaGTTCCAGCGGGAGGCCTCATGGAGCTGTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TLFSNSSFILST*FQREASWSCLS Trigger: GGAGAGACAGCTCCATGAGGCCTCCCGCTGGAATCAGGTGGAGAGGATGAAGGAGCTGTTTGAGAAGAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 72 bp | ACTGCGTCCAGATCACTGTGGCCATCTATGAGGAGCTaGACAAGGCCAGGGAAGTTGTGCTTCACAGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: TASRSLWPSMRS*TRPGKLCFTAR Trigger: CCTTGCTGTGAAGCACAACTTCCCTGGCCTTGTCCAGCTCCTCATAGATGGCCACAGTGATCTGGACGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CAA 90 bp | GCACAGTGTAGTAAGGTCAGGCCATCCTTGCTTTCACAGTGGACCTaGGCCCCAGCATTGACCAGGATCTGCACAATCTGCAAGTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: AQCSKVRPSLLSQWT*APALTRICTICKWP Trigger: TGGCCACTTGCAGATTGTGCAGATCCTGGTCAATGCTGGGGCCAAGGTCCACTGTGAAAGCAAGGATGGCCTGACCTTACTACACTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CAA 90 bp | CATCCGGTGACCATGCTCCTGGTAGCTCCTAGTTCCTGTCCACTGTaGCTCAATGGCACAGACATGAGCCTCCGTGAACTGCCAGGAATA | + |
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Preference number: 6 (lower is better) Translates to: HPVTMLLVAPSSCPL*LNGTDMSLRELPGI Trigger: TATTCCTGGCAGTTCACGGAGGCTCATGTCTGTGCCATTGAGCAACAGTGGACAGGAACTAGGAGCTACCAGGAGCATGGTCACCGGATG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS TCA 72 bp | AATCTGCAAGTGGCCAAACCAGGCAGACAGGAGGAGTaGGTTCATTCCAAACGAGTCCACGTCGTCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: NLQVAKPGRQEE*VHSKRVHVVHS Trigger: GCTGTGGACGACGTGGACTCGTTTGGAATGAACTCACTCCTCCTGTCTGCCTGGTTTGGCCACTTGCAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 72 bp | GCACCTGCAGCCCAGTGTAGGGCCACTCTGCCCACATaGTTTCTAGCCCTGATGTTAACTCTCTTCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: APAAQCRATLPT*FLALMLTLFSN Trigger: GTTTGAGAAGAGAGTTAACATCAGGGCTAGAAACCATGTGGGCAGAGTGGCCCTACACTGGGCTGCAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 72 bp | GCCCCAGCATTGACCAGGATCTGCACAATCTGCAAGTaGCCAAACCAGGCAGACAGGAGGAGTGAGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: APALTRICTICK*PNQADRRSEFI Trigger: AATGAACTCACTCCTCCTGTCTGCCTGGTTTGGCCACTTGCAGATTGTGCAGATCCTGGTCAATGCTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 72 bp | CAGTGTAGTAAGGTCAGGCCATCCTTGCTTTCACAGTaGACCTTGGCCCCAGCATTGACCAGGATCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: QCSKVRPSLLSQ*TLAPALTRICT Trigger: TGTGCAGATCCTGGTCAATGCTGGGGCCAAGGTCCACTGTGAAAGCAAGGATGGCCTGACCTTACTACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CAA 72 bp | CCATCCTTGCTTTCACAGTGGACCTTGGCCCCAGCATaGACCAGGATCTGCACAATCTGCAAGTGGCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: PSLLSQWTLAPA*TRICTICKWPN Trigger: GTTTGGCCACTTGCAGATTGTGCAGATCCTGGTCAATGCTGGGGCCAAGGTCCACTGTGAAAGCAAGGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS TCA 72 bp | CTTGCTTATCTCTCAGGCTTAAGTCAGCTCCAGCAATaGGAAGCATATCGGCTACATCCTGCCAGGCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: LAYLSGLSQLQQ*EAYRLHPARRA Trigger: AGCACGCCTGGCAGGATGTAGCCGATATGCTTCTCATTGCTGGAGCTGACTTAAGCCTGAGAGATAAGCAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CCA 72 bp | CGATCAGCTTTTATGATCATGTCCACCAGGCTGACATaGTTGCTACGGGCAGCTACTGCCAGGGCTGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: RSAFMIMSTRLT*LLRAATARAVF Trigger: AAAAACAGCCCTGGCAGTAGCTGCCCGTAGCAACCATGTCAGCCTGGTGGACATGATCATAAAAGCTGATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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| CDS CAA 72 bp | TCAGCTTTTATGATCATGTCCACCAGGCTGACATGGTaGCTACGGGCAGCTACTGCCAGGGCTGTTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: SAFMIMSTRLTW*LRAATARAVFP Trigger: AGGAAAAACAGCCCTGGCAGTAGCTGCCCGTAGCAACCATGTCAGCCTGGTGGACATGATCATAAAAGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061766.6 ENSMUST00000217646.2 |
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