Pregenerated sensors for ANKAR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039342Ensembl transcript IDs: ENSMUST00000053499.6, ENSMUST00000211837.2, ENSMUST00000212573.2, ENSMUST00000212710.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCTTCTTGCATACAGGTGGTAGCAGAGCCGCTGGACTGTTCCCAGTaGGACAAAAGCCTCTGGAATCCCAGCTCTCGAGTGAGCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: ASCIQVVAEPLDCSQ*DKSLWNPSSRVSQA Trigger: AGCCTGGCTCACTCGAGAGCTGGGATTCCAGAGGCTTTTGTCTCACTGGGAACAGTCCAGCGGCTCTGCTACCACCTGTATGCAAGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 90 bp | ATGATGAAGCGTCTCTGGTTGACGTTGAAGTTGGCGCTCCACAGCTaGCATATGACAGAGACCCGGTTGTGCAGGGCAGCATGGTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: MMKRLWLTLKLALHS*HMTETRLCRAAWWK Trigger: TTTCCACCATGCTGCCCTGCACAACCGGGTCTCTGTCATATGTCAGCTGTGGAGCGCCAACTTCAACGTCAACCAGAGACGCTTCATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 90 bp | ACAAATGGACCCCACTGCTCTGATGACGCTCAGAAGTGTGCCTTCTaGTATCTTATTAATCCTCAGCAGGCGAACCAGTGGTGCAATGCC | + |
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Preference number: 5 (lower is better) Translates to: TNGPHCSDDAQKCAF*YLINPQQANQWCNA Trigger: GGCATTGCACCACTGGTTCGCCTGCTGAGGATTAATAAGATACCAGAAGGCACACTTCTGAGCGTCATCAGAGCAGTGGGGTCCATTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 90 bp | TCAGTAGGATGGCAGTGGAGAAGCCTGCATTATTCATTTGACTCATaGGTCCACACGGGGTTTCTAGCTGAGAACGAGCATCATCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SVGWQWRSLHYSFDS*VHTGFLAENEHHPW Trigger: CCAAGGATGATGCTCGTTCTCAGCTAGAAACCCCGTGTGGACTCATGAGTCAAATGAATAATGCAGGCTTCTCCACTGCCATCCTACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 |
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| CDS TCA 90 bp | ATCATACAGAATAATAGCACAGCGAGAATGGAGTTCAGGCTCATCTaGAGTCAGCAGGTTGATCACAGCAGGAATGCCTCCTGCCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: IIQNNSTARMEFRLI*SQQVDHSRNASCLH Trigger: GTGGAGGCAGGAGGCATTCCTGCTGTGATCAACCTGCTGACTTCAGATGAGCCTGAACTCCATTCTCGCTGTGCTATTATTCTGTATGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS GCA 90 bp | CATGGGATTGCTCGTGTGGGCCACACCAATACAAATGGACCCCACTaGTCTGATGACGCTCAGAAGTGTGCCTTCTGGTATCTTATTAAT | + |
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Preference number: 5 (lower is better) Translates to: HGIARVGHTNTNGPH*SDDAQKCAFWYLIN Trigger: ATTAATAAGATACCAGAAGGCACACTTCTGAGCGTCATCAGAGCAGTGGGGTCCATTTGTATTGGTGTGGCCCACACGAGCAATCCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS GCA 90 bp | TGTGCCTTCTGGTATCTTATTAATCCTCAGCAGGCGAACCAGTGGTaGAATGCCCTTGCCTTCACATATCTGATTCTGATGCATCCGACT | + |
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Preference number: 5 (lower is better) Translates to: CAFWYLINPQQANQW*NALAFTYLILMHPT Trigger: AGTCGGATGCATCAGAATCAGATATGTGAAGGCAAGGGCATTGCACCACTGGTTCGCCTGCTGAGGATTAATAAGATACCAGAAGGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 90 bp | AAGTGTGCCTTCTGGTATCTTATTAATCCTCAGCAGGCGAACCAGTaGTGCAATGCCCTTGCCTTCACATATCTGATTCTGATGCATCCG | + |
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Preference number: 5 (lower is better) Translates to: KCAFWYLINPQQANQ*CNALAFTYLILMHP Trigger: CGGATGCATCAGAATCAGATATGTGAAGGCAAGGGCATTGCACCACTGGTTCGCCTGCTGAGGATTAATAAGATACCAGAAGGCACACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 90 bp | GGGTTTCTAGCTGAGAACGAGCATCATCCTTGGCAGCCAGCCAGCTaGCCAGTGTTGTTGTTAATAATTCTTGCACTTCAGTTCTATCGT | + |
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Preference number: 5 (lower is better) Translates to: GFLAENEHHPWQPAS*PVLLLIILALQFYR Trigger: ACGATAGAACTGAAGTGCAAGAATTATTAACAACAACACTGGTCAGCTGGCTGGCTGCCAAGGATGATGCTCGTTCTCAGCTAGAAACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 |
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| CDS TCA 90 bp | AGCTCAGGGATATTCAGCTCTATTATGTACTTGAGCACCTCTGTGTaGAAAGCCAGCACCGACAGGTGGATAATGTTGTTTCCCTTTGTG | + |
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Preference number: 5 (lower is better) Translates to: SSGIFSSIMYLSTSV*KASTDRWIMLFPFV Trigger: CACAAAGGGAAACAACATTATCCACCTGTCGGTGCTGGCTTTTCACACAGAGGTGCTCAAGTACATAATAGAGCTGAATATCCCTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 90 bp | ATGGATCACATAGTAGCTCTTTCCGTTCAACTCCATGACTGGTATTaGGTAAACTTCTTTGTATCCCGCATCTTCTGCAGAGGCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: MDHIVALSVQLHDWY*VNFFVSRIFCRGTG Trigger: TCCAGTGCCTCTGCAGAAGATGCGGGATACAAAGAAGTTTACCCAATACCAGTCATGGAGTTGAACGGAAAGAGCTACTATGTGATCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 90 bp | GCAGGAATGCCTCCTGCCTCCACTATAGCATGCACTATACTTACATaGGTTGAGATATTACTCAGCAACCCAACGGTTTTATACTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: AGMPPASTIACTILT*VEILLSNPTVLYCS Trigger: ACTGCAGTATAAAACCGTTGGGTTGCTGAGTAATATCTCAACTCATGTAAGTATAGTGCATGCTATAGTGGAGGCAGGAGGCATTCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 90 bp | GCCAAGGCCCAAAGTGCTATGGCTCCCTGCTCCTTAACATCTATTTaGAAGGCCTGTAGAAGTTTTAGGAGGTCCTTAGTTAATTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: AKAQSAMAPCSLTSI*KACRSFRRSLVNSL Trigger: AAGAGAATTAACTAAGGACCTCCTAAAACTTCTACAGGCCTTTCAAATAGATGTTAAGGAGCAGGGAGCCATAGCACTTTGGGCCTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS GCA 90 bp | TCCAATCTGCTCTGCCATATACTTTTGTTGTTTCAATGTTTGTCCTaGCAAGGCCCAAAGTGCTATGGCTCCCTGCTCCTTAACATCTAT | + |
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Preference number: 5 (lower is better) Translates to: SNLLCHILLLFQCLS*QGPKCYGSLLLNIY Trigger: ATAGATGTTAAGGAGCAGGGAGCCATAGCACTTTGGGCCTTGGCAGGACAAACATTGAAACAACAAAAGTATATGGCAGAGCAGATTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 90 bp | ATACATTTTTGGTTGTTTGAGGCTTCCCGTCTAGATCAATGTCCATaGTTGTGCGCCACAATTCAGAGAATCTGGCTCGTTTCTCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: IHFWLFEASRLDQCP*LCATIQRIWLVSLW Trigger: CCAAAGAGAAACGAGCCAGATTCTCTGAATTGTGGCGCACAATCATGGACATTGATCTAGACGGGAAGCCTCAAACAACCAAAAATGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212710.2 |
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| CDS TCA 90 bp | CAAGCTCAAAATGGATCACATAGTAGCTCTTTCCGTTCAACTCCATaGCTGGTATTGGGTAAACTTCTTTGTATCCCGCATCTTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: QAQNGSHSSSFRSTP*LVLGKLLCIPHLLQ Trigger: CTGCAGAAGATGCGGGATACAAAGAAGTTTACCCAATACCAGTCATGGAGTTGAACGGAAAGAGCTACTATGTGATCCATTTTGAGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 90 bp | TTTTCACACTTAGCAACATCATACAGAATAATAGCACAGCGAGAATaGAGTTCAGGCTCATCTGAAGTCAGCAGGTTGATCACAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: FSHLATSYRIIAQRE*SSGSSEVSRLITAG Trigger: TCCTGCTGTGATCAACCTGCTGACTTCAGATGAGCCTGAACTCCATTCTCGCTGTGCTATTATTCTGTATGATGTTGCTAAGTGTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS GCA 90 bp | GCTGATGGTGACAGGAGCATGCTTATTATGAGGTTGTATCCAATCTaGTCTGCCATATACTTTTGTTGTTTCAATGTTTGTCCTGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: ADGDRSMLIMRLYPI*SAIYFCCFNVCPAK Trigger: CTTGGCAGGACAAACATTGAAACAACAAAAGTATATGGCAGAGCAGATTGGATACAACCTCATAATAAGCATGCTCCTGTCACCATCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 90 bp | TTATCAATCCAGTTTCCAATATCAAGTGCTGTTGAAAGCGATCGTTaGAGGCAAAAAGGGTTAGTGCATAACCTGCTTTCAGGCAGACTT | + |
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Preference number: 5 (lower is better) Translates to: LSIQFPISSAVESDR*RQKGLVHNLLSGRL Trigger: AAGTCTGCCTGAAAGCAGGTTATGCACTAACCCTTTTTGCCTTCAACGATCGCTTTCAACAGCACTTGATATTGGAAACTGGATTGATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 90 bp | GTTCTGTTCATCTTTCCCAAGTTTGTTCAAAAATGCTGGAGGGTCTaGGTTGGCTTTCTGTTCATCTTTCCCAAGTTTGTTCAAAAATGC | + |
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Preference number: 5 (lower is better) Translates to: VLFIFPKFVQKCWRV*VGFLFIFPKFVQKC Trigger: GCATTTTTGAACAAACTTGGGAAAGATGAACAGAAAGCCAACCCAGACCCTCCAGCATTTTTGAACAAACTTGGGAAAGATGAACAGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 90 bp | AATGCCTCCTGCCTCCACTATAGCATGCACTATACTTACATGAGTTaGGATATTACTCAGCAACCCAACGGTTTTATACTGCAGTTTTAT | + |
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Preference number: 5 (lower is better) Translates to: NASCLHYSMHYTYMS*DITQQPNGFILQFY Trigger: ATAAAACTGCAGTATAAAACCGTTGGGTTGCTGAGTAATATCTCAACTCATGTAAGTATAGTGCATGCTATAGTGGAGGCAGGAGGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 90 bp | TTTCATAAACACAGCCTTTTCTTCAGGGCTATTGGGCTCATACGTTaGATCTTCATTCATGTCTTCATCATAGATCCCATTAAAGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: FHKHSLFFRAIGLIR*IFIHVFIIDPIKVW Trigger: CCAGACTTTAATGGGATCTATGATGAAGACATGAATGAAGATCCAACGTATGAGCCCAATAGCCCTGAAGAAAAGGCTGTGTTTATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212710.2 |
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| CDS CCA 90 bp | TTGATCTTTGCATCTTTACTGATGTTATTTGTGATGCGCAGGAATTaGTTCGGCTTATTCCTACACTCAGTTAACAGAAGTCGGAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: LIFASLLMLFVMRRN*FGLFLHSVNRSRKA Trigger: TGCTTTCCGACTTCTGTTAACTGAGTGTAGGAATAAGCCGAACCAATTCCTGCGCATCACAAATAACATCAGTAAAGATGCAAAGATCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 90 bp | CGTTGGATCTTCATTCATGTCTTCATCATAGATCCCATTAAAGTCTaGATCATTTGTAATATCAACCAAACCTGCCGAACTAAACTCAGA | + |
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Preference number: 5 (lower is better) Translates to: RWIFIHVFIIDPIKV*IICNINQTCRTKLR Trigger: TCTGAGTTTAGTTCGGCAGGTTTGGTTGATATTACAAATGATCCAGACTTTAATGGGATCTATGATGAAGACATGAATGAAGATCCAACG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212710.2 |
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| CDS CCA 90 bp | AACTGGATGAGATACTGGATGCCATTATTGTCTTTCATTGATTGTTaGTTGCTTTCATTTCCCATACATAACACCCGGATACAGTTCATT | + |
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Preference number: 5 (lower is better) Translates to: NWMRYWMPLLSFIDC*LLSFPIHNTRIQFI Trigger: AATGAACTGTATCCGGGTGTTATGTATGGGAAATGAAAGCAACCAACAATCAATGAAAGACAATAATGGCATCCAGTATCTCATCCAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS GCA 72 bp | CTAGGGCTCCCGAAGTGGCAGCCAGCAACAGCGGAGTaGACTGATTCTCTGCTGTTGCCTCGGCCTCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: LGLPKWQPATAE*TDSLLLPRPLA Trigger: TGCTAGAGGCCGAGGCAACAGCAGAGAATCAGTGCACTCCGCTGTTGCTGGCTGCCACTTCGGGAGCCCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 90 bp | GGTAGCCAAGGGCACAGGAACATGCTGTGCGAACCTCTTCGCTTCTaGCATACAGGTGGTAGCAGAGCCGCTGGACTGTTCCCAGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: GSQGHRNMLCEPLRF*HTGGSRAAGLFPVR Trigger: TCTCACTGGGAACAGTCCAGCGGCTCTGCTACCACCTGTATGCAAGAAGCGAAGAGGTTCGCACAGCATGTTCCTGTGCCCTTGGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 72 bp | CGTCTCTGGTTGACGTTGAAGTTGGCGCTCCACAGCTaGCATATGACAGAGACCCGGTTGTGCAGGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RLWLTLKLALHS*HMTETRLCRAA Trigger: TGCTGCCCTGCACAACCGGGTCTCTGTCATATGTCAGCTGTGGAGCGCCAACTTCAACGTCAACCAGAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS GCA 72 bp | GGCACAGGAACATGCTGTGCGAACCTCTTCGCTTCTTaGATACAGGTGGTAGCAGAGCCGCTGGACTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GTGTCCANLFAS*IQVVAEPLDCS Trigger: GGAACAGTCCAGCGGCTCTGCTACCACCTGTATGCAAGAAGCGAAGAGGTTCGCACAGCATGTTCCTGTGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | GGGCACAGGAACATGCTGTGCGAACCTCTTCGCTTCTaGCATACAGGTGGTAGCAGAGCCGCTGGACTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GHRNMLCEPLRF*HTGGSRAAGLF Trigger: GAACAGTCCAGCGGCTCTGCTACCACCTGTATGCAAGAAGCGAAGAGGTTCGCACAGCATGTTCCTGTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 72 bp | ATACAGGTGGTAGCAGAGCCGCTGGACTGTTCCCAGTaGGACAAAAGCCTCTGGAATCCCAGCTCTCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: IQVVAEPLDCSQ*DKSLWNPSSRV Trigger: CACTCGAGAGCTGGGATTCCAGAGGCTTTTGTCTCACTGGGAACAGTCCAGCGGCTCTGCTACCACCTGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS GCA 72 bp | GCTCGTGTGGGCCACACCAATACAAATGGACCCCACTaGTCTGATGACGCTCAGAAGTGTGCCTTCTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: ARVGHTNTNGPH*SDDAQKCAFWY Trigger: ATACCAGAAGGCACACTTCTGAGCGTCATCAGAGCAGTGGGGTCCATTTGTATTGGTGTGGCCCACACGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 90 bp | ATAGCACAGCGAGAATGGAGTTCAGGCTCATCTGAAGTCAGCAGGTaGATCACAGCAGGAATGCCTCCTGCCTCCACTATAGCATGCACT | + |
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Preference number: 6 (lower is better) Translates to: IAQREWSSGSSEVSR*ITAGMPPASTIACT Trigger: AGTGCATGCTATAGTGGAGGCAGGAGGCATTCCTGCTGTGATCAACCTGCTGACTTCAGATGAGCCTGAACTCCATTCTCGCTGTGCTAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 72 bp | GTTTTTCTCCAGTTCGCACCAAGAGAAAACAGGTACTaGATAGTGTCTAGGGCTCCCGAAGTGGCAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: VFLQFAPRENRY*IVSRAPEVAAS Trigger: GCTGGCTGCCACTTCGGGAGCCCTAGACACTATTCAGTACCTGTTTTCTCTTGGTGCGAACTGGAGAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | CGAGAATGGAGTTCAGGCTCATCTGAAGTCAGCAGGTaGATCACAGCAGGAATGCCTCCTGCCTCCACTATA | + |
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Preference number: 6 (lower is better) Translates to: REWSSGSSEVSR*ITAGMPPASTI Trigger: TATAGTGGAGGCAGGAGGCATTCCTGCTGTGATCAACCTGCTGACTTCAGATGAGCCTGAACTCCATTCTCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 72 bp | AGTGAGACAAAAGCCTCTGGAATCCCAGCTCTCGAGTaGGCCAGGCTGGCTATTATATTACCTGTCAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SETKASGIPALE*ARLAIILPVKA Trigger: TGCCTTGACAGGTAATATAATAGCCAGCCTGGCTCACTCGAGAGCTGGGATTCCAGAGGCTTTTGTCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 72 bp | GCTGAGAACGAGCATCATCCTTGGCAGCCAGCCAGCTaGCCAGTGTTGTTGTTAATAATTCTTGCACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: AENEHHPWQPAS*PVLLLIILALQ Trigger: CTGAAGTGCAAGAATTATTAACAACAACACTGGTCAGCTGGCTGGCTGCCAAGGATGATGCTCGTTCTCAGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 |
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| CDS TCA 72 bp | TGGCAGTGGAGAAGCCTGCATTATTCATTTGACTCATaGGTCCACACGGGGTTTCTAGCTGAGAACGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: WQWRSLHYSFDS*VHTGFLAENEH Trigger: ATGCTCGTTCTCAGCTAGAAACCCCGTGTGGACTCATGAGTCAAATGAATAATGCAGGCTTCTCCACTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 |
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| CDS TCA 72 bp | CTGGAAGCTCAGGGATATTCAGCTCTATTATGTACTTaGGCACCTCTGTGTGAAAAGCCAGCACCGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: LEAQGYSALLCT*APLCEKPAPTG Trigger: ACCTGTCGGTGCTGGCTTTTCACACAGAGGTGCTCAAGTACATAATAGAGCTGAATATCCCTGAGCTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 72 bp | TGGTTGTTTGAGGCTTCCCGTCTAGATCAATGTCCATaGTTGTGCGCCACAATTCAGAGAATCTGGCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: WLFEASRLDQCP*LCATIQRIWLV Trigger: AACGAGCCAGATTCTCTGAATTGTGGCGCACAATCATGGACATTGATCTAGACGGGAAGCCTCAAACAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212710.2 |
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| CDS GCA 72 bp | CTCTGCCATATACTTTTGTTGTTTCAATGTTTGTCCTaGCAAGGCCCAAAGTGCTATGGCTCCCTGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LCHILLLFQCLS*QGPKCYGSLLL Trigger: AAGGAGCAGGGAGCCATAGCACTTTGGGCCTTGGCAGGACAAACATTGAAACAACAAAAGTATATGGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | GTGCGCCACAATTCAGAGAATCTGGCTCGTTTCTCTTaGGGCATGTATATTCCATGCCACAGTGCTTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: VRHNSENLARFS*GMYIPCHSAFS Trigger: GCTAAAAGCACTGTGGCATGGAATATACATGCCCAAAGAGAAACGAGCCAGATTCTCTGAATTGTGGCGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212710.2 |
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| CDS TCA 72 bp | AGCACTGGAAGAGCATTTTCCTCTACAACAAATTGTTaGCTCATGGGATTGCTCGTGTGGGCCACACCAATA | + |
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Preference number: 6 (lower is better) Translates to: STGRAFSSTTNC*LMGLLVWATPI Trigger: TATTGGTGTGGCCCACACGAGCAATCCCATGAGTCAACAATTTGTTGTAGAGGAAAATGCTCTTCCAGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS GCA 72 bp | CATTTTCCTCTACAACAAATTGTTGACTCATGGGATTaGTCGTGTGGGCCACACCAATACAAATGGACCCCA | + |
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Preference number: 6 (lower is better) Translates to: HFPLQQIVDSWD*SCGPHQYKWTP Trigger: TGGGGTCCATTTGTATTGGTGTGGCCCACACGAGCAATCCCATGAGTCAACAATTTGTTGTAGAGGAAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 72 bp | TGCGCCACAATTCAGAGAATCTGGCTCGTTTCTCTTTaGGCATGTATATTCCATGCCACAGTGCTTTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: CATIQRIWLVSL*ACIFHATVLLA Trigger: TGCTAAAAGCACTGTGGCATGGAATATACATGCCCAAAGAGAAACGAGCCAGATTCTCTGAATTGTGGCGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212710.2 |
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| CDS CCA 72 bp | TTCTGGTATCTTATTAATCCTCAGCAGGCGAACCAGTaGTGCAATGCCCTTGCCTTCACATATCTGATTCTG | + |
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Preference number: 6 (lower is better) Translates to: FWYLINPQQANQ*CNALAFTYLIL Trigger: CAGAATCAGATATGTGAAGGCAAGGGCATTGCACCACTGGTTCGCCTGCTGAGGATTAATAAGATACCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | GGATGCAGATGTTATCATAGAAGGCAGCAAAGTGGATaGGCATCCAGCCCCTCTTCTCAGTTAGAGTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: GCRCYHRRQQSG*ASSPSSQLECN Trigger: ATTACACTCTAACTGAGAAGAGGGGCTGGATGCCAATCCACTTTGCTGCCTTCTATGATAACATCTGCATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | AAGCACTGGAAGAGCATTTTCCTCTACAACAAATTGTaGACTCATGGGATTGCTCGTGTGGGCCACACCAAT | + |
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Preference number: 6 (lower is better) Translates to: KHWKSIFLYNKL*THGIARVGHTN Trigger: ATTGGTGTGGCCCACACGAGCAATCCCATGAGTCAACAATTTGTTGTAGAGGAAAATGCTCTTCCAGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | AATAAGCACTGGAAGAGCATTTTCCTCTACAACAAATaGTTGACTCATGGGATTGCTCGTGTGGGCCACACC | + |
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Preference number: 6 (lower is better) Translates to: NKHWKSIFLYNK*LTHGIARVGHT Trigger: GGTGTGGCCCACACGAGCAATCCCATGAGTCAACAATTTGTTGTAGAGGAAAATGCTCTTCCAGTGCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 72 bp | ATAGCCGGCTTCATCGGAGACATTGATAGTGGAGCTTaGGGTTTTACGGCTAAATGTGTAGAAAACAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: IAGFIGDIDSGA*GFTAKCVENSR Trigger: TCTGCTGTTTTCTACACATTTAGCCGTAAAACCTCAAGCTCCACTATCAATGTCTCCGATGAAGCCGGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 72 bp | AGGCTTAAGGATGGAAGTCCCATCCTTTGCTGCAGTTaGAACTCCTTTAGGAATGCAGGATTGATCTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: RLKDGSPILCCS*NSFRNAGLIFA Trigger: TGCAAAGATCAATCCTGCATTCCTAAAGGAGTTTCAACTGCAGCAAAGGATGGGACTTCCATCCTTAAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 72 bp | GAAGAGCATTTTCCTCTACAACAAATTGTTGACTCATaGGATTGCTCGTGTGGGCCACACCAATACAAATGG | + |
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Preference number: 6 (lower is better) Translates to: EEHFPLQQIVDS*DCSCGPHQYKW Trigger: CCATTTGTATTGGTGTGGCCCACACGAGCAATCCCATGAGTCAACAATTTGTTGTAGAGGAAAATGCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 72 bp | CCTCCTGCCTCCACTATAGCATGCACTATACTTACATaGGTTGAGATATTACTCAGCAACCCAACGGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: PPASTIACTILT*VEILLSNPTVL Trigger: TAAAACCGTTGGGTTGCTGAGTAATATCTCAACTCATGTAAGTATAGTGCATGCTATAGTGGAGGCAGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 72 bp | CAAAGTGCTATGGCTCCCTGCTCCTTAACATCTATTTaGAAGGCCTGTAGAAGTTTTAGGAGGTCCTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: QSAMAPCSLTSI*KACRSFRRSLV Trigger: AACTAAGGACCTCCTAAAACTTCTACAGGCCTTTCAAATAGATGTTAAGGAGCAGGGAGCCATAGCACTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 72 bp | CACAGCCTTTTCTTCAGGGCTATTGGGCTCATACGTTaGATCTTCATTCATGTCTTCATCATAGATCCCATT | + |
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Preference number: 6 (lower is better) Translates to: HSLFFRAIGLIR*IFIHVFIIDPI Trigger: AATGGGATCTATGATGAAGACATGAATGAAGATCCAACGTATGAGCCCAATAGCCCTGAAGAAAAGGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212710.2 |
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| CDS CCA 72 bp | ATAGTAGCTCTTTCCGTTCAACTCCATGACTGGTATTaGGTAAACTTCTTTGTATCCCGCATCTTCTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: IVALSVQLHDWY*VNFFVSRIFCR Trigger: TCTGCAGAAGATGCGGGATACAAAGAAGTTTACCCAATACCAGTCATGGAGTTGAACGGAAAGAGCTACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 72 bp | TTAGCAACATCATACAGAATAATAGCACAGCGAGAATaGAGTTCAGGCTCATCTGAAGTCAGCAGGTTGATC | + |
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Preference number: 6 (lower is better) Translates to: LATSYRIIAQRE*SSGSSEVSRLI Trigger: GATCAACCTGCTGACTTCAGATGAGCCTGAACTCCATTCTCGCTGTGCTATTATTCTGTATGATGTTGCTAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 72 bp | GTCACTGGAGGTAATAAAGTCAGGGAATCTCTTGGTTaGATTTTAGGTCTTGTTTTCTGTCGGTGCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VTGGNKVRESLG*ILGLVFCRCSF Trigger: GAAAGAGCACCGACAGAAAACAAGACCTAAAATCCAACCAAGAGATTCCCTGACTTTATTACCTCCAGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | ACACAGCCTTTTCTTCAGGGCTATTGGGCTCATACGTaGGATCTTCATTCATGTCTTCATCATAGATCCCAT | + |
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Preference number: 6 (lower is better) Translates to: TQPFLQGYWAHT*DLHSCLHHRSH Trigger: ATGGGATCTATGATGAAGACATGAATGAAGATCCAACGTATGAGCCCAATAGCCCTGAAGAAAAGGCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212710.2 |
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| CDS TCA 72 bp | ATATTCAGCTCTATTATGTACTTGAGCACCTCTGTGTaGAAAGCCAGCACCGACAGGTGGATAATGTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: IFSSIMYLSTSV*KASTDRWIMLF Trigger: AAACAACATTATCCACCTGTCGGTGCTGGCTTTTCACACAGAGGTGCTCAAGTACATAATAGAGCTGAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS TCA 72 bp | CAGTTTCCAATATCAAGTGCTGTTGAAAGCGATCGTTaGAGGCAAAAAGGGTTAGTGCATAACCTGCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: QFPISSAVESDR*RQKGLVHNLLS Trigger: TGAAAGCAGGTTATGCACTAACCCTTTTTGCCTTCAACGATCGCTTTCAACAGCACTTGATATTGGAAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 72 bp | TTCACACTGCAACATTTCCACCAGAGTTTCCCAAACTaGAAGCTCAGGGATATTCAGCTCTATTATGTACTT | + |
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Preference number: 6 (lower is better) Translates to: FTLQHFHQSFPN*KLRDIQLYYVL Trigger: AAGTACATAATAGAGCTGAATATCCCTGAGCTTCCAGTTTGGGAAACTCTGGTGGAAATGTTGCAGTGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | TTTCCAGAAATTCCTTCTGGATTAAAGGGTTGCAGTTaGCCAGTGATTCCACAGCCATTGCACCTTTTACTT | + |
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Preference number: 6 (lower is better) Translates to: FPEIPSGLKGCS*PVIPQPLHLLL Trigger: AAGTAAAAGGTGCAATGGCTGTGGAATCACTGGCAAACTGCAACCCTTTAATCCAGAAGGAATTTCTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | GATGGAAATGAAAAAGTGTTGTGGGAAATATTGGCCTaGTGTGTTGTTCTGAAGAGCTCCTTGACGTTAGTC | + |
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Preference number: 6 (lower is better) Translates to: DGNEKVLWEILA*CVVLKSSLTLV Trigger: GACTAACGTCAAGGAGCTCTTCAGAACAACACACAAGGCCAATATTTCCCACAACACTTTTTCATTTCCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 90 bp | GCTAAGCAAATTACTTCTAAAGACATGACAGCCATCATTCTTCGTTaGGAGCTTTCACACTGCAACATTTCCACCAGAGTTTCCCAAACT | + |
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Preference number: 6 (lower is better) Translates to: AKQITSKDMTAIILR*ELSHCNISTRVSQT Trigger: AGTTTGGGAAACTCTGGTGGAAATGTTGCAGTGTGAAAGCTCCAAACGAAGAATGATGGCTGTCATGTCTTTAGAAGTAATTTGCTTAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 90 bp | TCCTTAGTTAATTCTCTTTCCAGAAATTCCTTCTGGATTAAAGGGTaGCAGTTTGCCAGTGATTCCACAGCCATTGCACCTTTTACTTGG | + |
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Preference number: 6 (lower is better) Translates to: SLVNSLSRNSFWIKG*QFASDSTAIAPFTW Trigger: CCAAGTAAAAGGTGCAATGGCTGTGGAATCACTGGCAAACTGCAACCCTTTAATCCAGAAGGAATTTCTGGAAAGAGAATTAACTAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | TTAGCTGATGGTGACAGGAGCATGCTTATTATGAGGTaGTATCCAATCTGCTCTGCCATATACTTTTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: LADGDRSMLIMR*YPICSAIYFCC Trigger: ACAACAAAAGTATATGGCAGAGCAGATTGGATACAACCTCATAATAAGCATGCTCCTGTCACCATCAGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 90 bp | CCAATAGGCTGTCTCAAATATAAAGATGTTTTCGTGCTGTTGAATTaGGACGGTGCTGAATGTCAGCTTCATCATTATACTCTCAGCATA | + |
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Preference number: 6 (lower is better) Translates to: PIGCLKYKDVFVLLN*DGAECQLHHYTLSI Trigger: TATGCTGAGAGTATAATGATGAAGCTGACATTCAGCACCGTCCAAATTCAACAGCACGAAAACATCTTTATATTTGAGACAGCCTATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 ENSMUST00000212710.2 |
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| CDS CAA 90 bp | TGGATGAGATACTGGATGCCATTATTGTCTTTCATTGATTGTTGGTaGCTTTCATTTCCCATACATAACACCCGGATACAGTTCATTACG | + |
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Preference number: 6 (lower is better) Translates to: WMRYWMPLLSFIDCW*LSFPIHNTRIQFIT Trigger: CGTAATGAACTGTATCCGGGTGTTATGTATGGGAAATGAAAGCAACCAACAATCAATGAAAGACAATAATGGCATCCAGTATCTCATCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 90 bp | TACTGCATCTTAGCTGATGGTGACAGGAGCATGCTTATTATGAGGTaGTATCCAATCTGCTCTGCCATATACTTTTGTTGTTTCAATGTT | + |
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Preference number: 6 (lower is better) Translates to: YCILADGDRSMLIMR*YPICSAIYFCCFNV Trigger: AACATTGAAACAACAAAAGTATATGGCAGAGCAGATTGGATACAACCTCATAATAAGCATGCTCCTGTCACCATCAGCTAAGATGCAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CCA 72 bp | GCCTTTTCACTTTCAGATTATTCACAGTTTCATTTATaGCTACCCACCATTGAGTCTTATAGAGTTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: AFSLSDYSQFHL*LPTIESYRVAG Trigger: ACCAGCAACTCTATAAGACTCAATGGTGGGTAGCCATAAATGAAACTGTGAATAATCTGAAAGTGAAAAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | ATAGGCTGTCTCAAATATAAAGATGTTTTCGTGCTGTaGAATTTGGACGGTGCTGAATGTCAGCTTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: IGCLKYKDVFVL*NLDGAECQLHH Trigger: ATGATGAAGCTGACATTCAGCACCGTCCAAATTCAACAGCACGAAAACATCTTTATATTTGAGACAGCCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 ENSMUST00000212710.2 |
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| CDS CAA 72 bp | TACTGGATGCCATTATTGTCTTTCATTGATTGTTGGTaGCTTTCATTTCCCATACATAACACCCGGATACAG | + |
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Preference number: 6 (lower is better) Translates to: YWMPLLSFIDCW*LSFPIHNTRIQ Trigger: CTGTATCCGGGTGTTATGTATGGGAAATGAAAGCAACCAACAATCAATGAAAGACAATAATGGCATCCAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 90 bp | CATAACACCCGGATACAGTTCATTACGTTCACTAGCACACTTTCTTaGTTAAGGCTTAAGAGATTTATCAGAGCTGGAATTCCACTATAT | + |
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Preference number: 6 (lower is better) Translates to: HNTRIQFITFTSTLS*LRLKRFIRAGIPLY Trigger: ATATAGTGGAATTCCAGCTCTGATAAATCTCTTAAGCCTTAACAAAGAAAGTGTGCTAGTGAACGTAATGAACTGTATCCGGGTGTTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS GCA 72 bp | GACAGGAGCATGCTTATTATGAGGTTGTATCCAATCTaGTCTGCCATATACTTTTGTTGTTTCAATGTTTGT | + |
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Preference number: 6 (lower is better) Translates to: DRSMLIMRLYPI*SAIYFCCFNVC Trigger: ACAAACATTGAAACAACAAAAGTATATGGCAGAGCAGATTGGATACAACCTCATAATAAGCATGCTCCTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 90 bp | ATTCACAGTTTCATTTATGGCTACCCACCATTGAGTCTTATAGAGTaGCTGGTAGAAAATTTCAAGCTCAAAATGGATCACATAGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: IHSFIYGYPPLSLIE*LVENFKLKMDHIVA Trigger: AGCTACTATGTGATCCATTTTGAGCTTGAAATTTTCTACCAGCAACTCTATAAGACTCAATGGTGGGTAGCCATAAATGAAACTGTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 90 bp | AAAGGGTTAGTGCATAACCTGCTTTCAGGCAGACTTCCTTATCTTTaGAGTGAAGAAGATAAAGGACATCAGAATATTCAAATCCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: KGLVHNLLSGRLPYL*SEEDKGHQNIQILH Trigger: ATGAAGGATTTGAATATTCTGATGTCCTTTATCTTCTTCACTCAAAAGATAAGGAAGTCTGCCTGAAAGCAGGTTATGCACTAACCCTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 90 bp | AGATTTATCAGAGCTGGAATTCCACTATATTTGGCAATAACATCCTaGTTTTCACACTTAGCAACATCATACAGAATAATAGCACAGCGA | + |
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Preference number: 6 (lower is better) Translates to: RFIRAGIPLYLAITS*FSHLATSYRIIAQR Trigger: TCGCTGTGCTATTATTCTGTATGATGTTGCTAAGTGTGAAAACAAGGATGTTATTGCCAAATATAGTGGAATTCCAGCTCTGATAAATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 |
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| CDS CAA 72 bp | TGTCTCAAATATAAAGATGTTTTCGTGCTGTTGAATTaGGACGGTGCTGAATGTCAGCTTCATCATTATACT | + |
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Preference number: 6 (lower is better) Translates to: CLKYKDVFVLLN*DGAECQLHHYT Trigger: AGTATAATGATGAAGCTGACATTCAGCACCGTCCAAATTCAACAGCACGAAAACATCTTTATATTTGAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053499.6 ENSMUST00000211837.2 ENSMUST00000212573.2 ENSMUST00000212710.2 |
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