RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANK3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000069601

Ensembl transcript IDs: ENSMUST00000047061.13, ENSMUST00000054167.15, ENSMUST00000092431.12, ENSMUST00000092432.12, ENSMUST00000092433.12, ENSMUST00000092434.12, ENSMUST00000181974.8, ENSMUST00000182029.8, ENSMUST00000182155.8, ENSMUST00000182207.8, ENSMUST00000182269.8, ENSMUST00000182437.8, ENSMUST00000182439.8, ENSMUST00000182557.8, ENSMUST00000182665.8, ENSMUST00000182683.8, ENSMUST00000182692.8, ENSMUST00000182795.8, ENSMUST00000182884.8, ENSMUST00000182972.8, ENSMUST00000182992.8, ENSMUST00000182993.8, ENSMUST00000183023.8, ENSMUST00000183074.8, ENSMUST00000183082.8, ENSMUST00000183148.8, ENSMUST00000183169.8, ENSMUST00000183240.2, ENSMUST00000183261.8, ENSMUST00000185582.2, ENSMUST00000186247.7, ENSMUST00000218680.2

Found 2321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTCTCCCTGCTTAGGCTCTGACCTGGTGGACCCCTCTTCTTCCTaGAGGTTGAGCCTGGCTTTGCCGTCAGCCGTAGTCCTGGTCATC +
Preference number: 1 (lower is better)
Translates to: PSPCLGSDLVDPSSS*RLSLALPSAVVLVI
Trigger: GATGACCAGGACTACGGCTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 90 bp ACCTACAACGTCTTTTGGAGTGGGCGGTCTGCTGTTGCCGGAGGTTaGTTCACAAGAGAACCCCTGTTCAGTCTGGTGGCGCAGCCCTCT +
Preference number: 1 (lower is better)
Translates to: TYNVFWSGRSAVAGG*FTREPLFSLVAQPS
Trigger: AGAGGGCTGCGCCACCAGACTGAACAGGGGTTCTCTTGTGAAGCAACCTCCGGCAACAGCAGACCGCCCACTCCAAAAGACGTTGTAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR TCA 90 bp GGGCGGTGCCTCTGTTTTCTTATTTCTAGCAGACTTCGTGGTAACTaGAGGCTGGCCGCCCCGGGAAGTCTCGGACAACGACGTGTTCCT +
Preference number: 1 (lower is better)
Translates to: GRCLCFLISSRLRGN*RLAAPGSLGQRRVP
Trigger: AGGAACACGTCGTTGTCCGAGACTTCCCGGGGCGGCCAGCCTTCAGTTACCACGAAGTCTGCTAGAAATAAGAAAACAGAGGCACCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 90 bp CTGTCATCCAGACGGTCCAGTAACCCACCAGTTAGTCTTCGAGCTTaGGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTTCTGCCAA +
Preference number: 1 (lower is better)
Translates to: LSSRRSSNPPVSLRA*AGDSRLPLGVSFCQ
Trigger: TTGGCAGAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAACTGGTGGGTTACTGGACCGTCTGGATGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CCA 90 bp GCCTCTGTTTTCTTATTTCTAGCAGACTTCGTGGTAACTGAAGGCTaGCCGCCCCGGGAAGTCTCGGACAACGACGTGTTCCTTGAGGTA +
Preference number: 1 (lower is better)
Translates to: ASVFLFLADFVVTEG*PPREVSDNDVFLEV
Trigger: TACCTCAAGGAACACGTCGTTGTCCGAGACTTCCCGGGGCGGCCAGCCTTCAGTTACCACGAAGTCTGCTAGAAATAAGAAAACAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR TCA 90 bp GTGGTTTCCATTTGCTTCGATCTTCCCAGGTTCTCCCGTGAGGTATaGGGTAATAGAATCCCGAGCCTGGTCAGAGCTGTCATCCAGACG +
Preference number: 1 (lower is better)
Translates to: VVSICFDLPRFSREV*GNRIPSLVRAVIQT
Trigger: CGTCTGGATGACAGCTCTGACCAGGCTCGGGATTCTATTACCTCATACCTCACGGGAGAACCTGGGAAGATCGAAGCAAATGGAAACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CCA 90 bp GCTGGTTTCTTCCAGAGATTTCTGGTAGGCTGTGAGGGGCGACACTaGTTCCTCAGTGCGACCACATCCGTGTGTTTTTGGTTTCAGGTT +
Preference number: 1 (lower is better)
Translates to: AGFFQRFLVGCEGRH*FLSATTSVCFWFQV
Trigger: AACCTGAAACCAAAAACACACGGATGTGGTCGCACTGAGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAATCTCTGGAAGAAACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR TCA 90 bp GTTGCTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACGGTCAAATGTaGGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCACTTTTCCATC +
Preference number: 1 (lower is better)
Translates to: VAVPVASFWAPHGQM*AGGFEESQANHFSI
Trigger: GATGGAAAAGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAGCCCAGAAAGAAGCCACAGGAACAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTaGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGT +
Preference number: 1 (lower is better)
Translates to: IIANIQESVKESRER*IPILVQGEVTWDAC
Trigger: ACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR CCA 90 bp GGATGCTGGGATACCAGTGTGAGAGAGCCAGCTCTGTTGCTTGAGTaGCCAGTGAAGAGAGTCCCTTCTAGAAACAACCCTTTCATGTTA +
Preference number: 1 (lower is better)
Translates to: GCWDTSVREPALLLE*PVKRVPSRNNPFML
Trigger: TAACATGAAAGGGTTGTTTCTAGAAGGGACTCTCTTCACTGGCCACTCAAGCAACAGAGCTGGCTCTCTCACACTGGTATCCCAGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR TCA 90 bp CGTTTTGGGATTCCGGGAAGTAGGGTTTTGCCTTTGCTTCTGGAATaGCTTCCGCTGTGTGGTTTCCATTTGCTTCGATCTTCCCAGGTT +
Preference number: 1 (lower is better)
Translates to: RFGIPGSRVLPLLLE*LPLCGFHLLRSSQV
Trigger: AACCTGGGAAGATCGAAGCAAATGGAAACCACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCGGAATCCCAAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR TCA 90 bp CCTCAGTGCGACCACATCCGTGTGTTTTTGGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATATCGTTTTGGGATTCCGGGAAGTAGG +
Preference number: 1 (lower is better)
Translates to: PQCDHIRVFLVSGSP*CSVSLYRFGIPGSR
Trigger: CCTACTTCCCGGAATCCCAAAACGATATAGGGAAACAGAGCATCAAGGAGAACCTGAAACCAAAAACACACGGATGTGGTCGCACTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR TCA 90 bp GGCTTCTTTCTGGGCTCCTCACGGTCAAATGTGAGCGGGAGGCTTTaGAGAAAGTCAAGCAAACCACTTTTCCATCGACGTTTATTAACC +
Preference number: 1 (lower is better)
Translates to: GFFLGSSRSNVSGRL*RKSSKPLFHRRLLT
Trigger: GGTTAATAAACGTCGATGGAAAAGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAGCCCAGAAAGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR GCA 90 bp GCTCTGTTTCCCTATATCGTTTTGGGATTCCGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGACTTCCGCTGTGTGGTTTCCATTTGC +
Preference number: 1 (lower is better)
Translates to: ALFPYIVLGFREVGF*LCFWNDFRCVVSIC
Trigger: GCAAATGGAAACCACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCGGAATCCCAAAACGATATAGGGAAACAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 90 bp AGTCCTGGTCATCTTTTTCATGCCGACAGGCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTTGCTGGTTTCTTCCAGAGATTTCTG +
Preference number: 1 (lower is better)
Translates to: SPGHLFHADRHTGFR*VFYDKLAGFFQRFL
Trigger: CAGAAATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCAGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CCA 90 bp TATATCGTTTTGGGATTCCGGGAAGTAGGGTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTGGTTTCCATTTGCTTCGATCTTCCC +
Preference number: 1 (lower is better)
Translates to: YIVLGFREVGFCLCF*NDFRCVVSICFDLP
Trigger: GGGAAGATCGAAGCAAATGGAAACCACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCGGAATCCCAAAACGATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 90 bp TTTCCCTATATCGTTTTGGGATTCCGGGAAGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGCTGTGTGGTTTCCATTTGCTTCGAT +
Preference number: 1 (lower is better)
Translates to: FPYIVLGFREVGFCL*FWNDFRCVVSICFD
Trigger: ATCGAAGCAAATGGAAACCACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 90 bp TTCATCTTTAAATTCTTAGCTCCCCCACAAAGTGCACAGAGTTTATaGAAGGTGGGTGTTTTCGGGAGAGAGCAGAACGTTCCAGAGTAT +
Preference number: 1 (lower is better)
Translates to: FIFKFLAPPQSAQSL*KVGVFGREQNVPEY
Trigger: ATACTCTGGAACGTTCTGCTCTCTCCCGAAAACACCCACCTTGCATAAACTCTGTGCACTTTGTGGGGGAGCTAAGAATTTAAAGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR CCA 90 bp AGTAGCAAACTTAAGACCCACAGCAAATTTCATACATGTATACAATaGGTTATGATCATAACCACCCTCCGATTACCCTCTCCAACACGT +
Preference number: 1 (lower is better)
Translates to: SSKLKTHSKFHTCIQ*VMIITTLRLPSPTR
Trigger: ACGTGTTGGAGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATACATGTATGAAATTTGCTGTGGGTCTTAAGTTTGCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
3UTR-3UTR GCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCATTCCGTCCTCTGCTaGCCCTCCTCCTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: ERWIPILVQGEVTWDACPHSVLC*PSSWVA
Trigger: TGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCGTGTCACTGACGTGTaGTGGAAGCAGCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: ERWIPILVQGEVTWDACPRVTDV*WKQLTH
Trigger: GTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTGCTGCCCCTCCTCCTaGGTGGCACAGGTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVCCPSS*VAQVLF
Trigger: AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR CAA 90 bp TCTGACCTGGTGGACCCCTCTTCTTCCTGGAGGTTGAGCCTGGCTTaGCCGTCAGCCGTAGTCCTGGTCATCTTTTTCATGCCGACAGGC +
Preference number: 2 (lower is better)
Translates to: SDLVDPSSSWRLSLA*PSAVVLVIFFMPTG
Trigger: GCCTGTCGGCATGAAAAAGATGACCAGGACTACGGCTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CAA 90 bp CCCTGCTTAGGCTCTGACCTGGTGGACCCCTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCAGCCGTAGTCCTGGTCATCTTTTTC +
Preference number: 2 (lower is better)
Translates to: PCLGSDLVDPSSSWR*SLALPSAVVLVIFF
Trigger: GAAAAAGATGACCAGGACTACGGCTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR GCA 90 bp GGCGACACTGGTTCCTCAGTGCGACCACATCCGTGTGTTTTTGGTTTCAGGTTCCATTCCGTCCTCTGCTaGCCCTCCTCCTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: GDTGSSVRPHPCVFGFRFHSVLC*PSSWVA
Trigger: TGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATG...GAACCTGAAACCAAAAACACACGGATGTGGTCGCACTGAGGAACCAGTGTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCGTGTCACTGACGTGTaGTGGAAGCAGCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCRVTDV*WKQLTH
Trigger: GTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAACATTCCGTCCTCTGCTaGCCCTCCTCCTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKHSVLC*PSSWVA
Trigger: TGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATG...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp CTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACGGTCAAATGTGAGCGGGAGGCTTATGGCTTTAGTGACTaGAGGCACAGACAGGGCCCC +
Preference number: 2 (lower is better)
Translates to: LFLWLLSGLLTVKCEREAYGFSD*RHRQGP
Trigger: GGGGCCCTGTCTGTGCCTCCAGTCACTAAAGCCATA...AGCCTCCCGCTCACATTTGACCGTGAGGAGCCCAGAAAGAAGCCACAGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR GCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTGTCGTACACTGCACTTaGTCAGTGTGCATTTCAGTG +
Preference number: 2 (lower is better)
Translates to: ERWIPILVQGEVTWDACPVVHCT*SVCISV
Trigger: CACTGAAATGCACACTGAGCAAGTGCAGTGTACGAC...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCGTCGTACACTGCACTTaGTCAGTGTGCATTTCAGTG +
Preference number: 2 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVVVHCT*SVCISV
Trigger: CACTGAAATGCACACTGAGCAAGTGCAGTGTACGAC...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTGTCACTGACGTGTGGTaGAAGCAGCTGACCCACACT +
Preference number: 2 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFVTDVW*KQLTHT
Trigger: AGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGAC...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp GGTCAGAGCTGTCATCCAGACGGTCCAGTAACCCACCAGTTAGTCTTCGAGCTTCGTGTCACTGACGTGTaGTGGAAGCAGCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: GQSCHPDGPVTHQLVFELRVTDV*WKQLTH
Trigger: GTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG...AAGCTCGAAGACTAACTGGTGGGTTACTGGACCGTCTGGATGACAGCTCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR TCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTCAATACTGGCAGTATaGCCAAGTGGTCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCSILAV*PSGPGL
Trigger: CAGTCCAGGACCACTTGGTCATACTGCCAGTATTGA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGCCTGCTGATCTCTGGTaGGTTTCTCAATACTGGCAG +
Preference number: 2 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRPADLW*VSQYWQ
Trigger: CTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGG...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTGTGTCTTCTTGATTTaGTCATTCCGTCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVCVFLI*SFRPLL
Trigger: CAGCAGAGGACGGAATGATCAAATCAAGAAGACACA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTGCACTTGCTCAGTGTaGATTTCAGTGCCGGGAATG +
Preference number: 2 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCCTCSV*ISVPGM
Trigger: CATTCCCGGCACTGAAATGCACACTGAGCAAGTGCA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCACATTCCGTCCTCTGCTaGCCCTCCTCCTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: LKNMASCVVHCTCSVCISHSVLC*PSSWVA
Trigger: TGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATG...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAACGTGTCACTGACGTGTaGTGGAAGCAGCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKRVTDV*WKQLTH
Trigger: GTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGCCCCTCCTCCTGGGTaGCACAGGTGTTGTTTTGTC +
Preference number: 2 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKAPPPG*HRCCFV
Trigger: GACAAAACAACACCTGTGCCACCCAGGAGGAGGGGC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR CAA 90 bp CTGAAGGCTGGCCGCCCCGGGAAGTCTCGGACAACGACGTGTTCCTaGAGGTACTTTCTTCCTCATCAGACAACTCCGATTGCATCTTTT +
Preference number: 2 (lower is better)
Translates to: LKAGRPGKSRTTTCS*RYFLPHQTTPIASF
Trigger: AAAAGATGCAATCGGAGTTGTCTGATGAGGAAGAAAGTACCTCAAGGAACACGTCGTTGTCCGAGACTTCCCGGGGCGGCCAGCCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCCTGCTGATCTCTGGTaGGTTTCTCAATACTGGCAG +
Preference number: 2 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVPADLW*VSQYWQ
Trigger: CTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182665.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
3UTR-3UTR GCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGCACTTGCTCAGTGTaGATTTCAGTGCCGGGAATG +
Preference number: 2 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFCTCSV*ISVPGM
Trigger: CATTCCCGGCACTGAAATGCACACTGAGCAAGTGCA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGTCACTGACGTGTGGTaGAAGCAGCTGACCCACACT +
Preference number: 2 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKVTDVW*KQLTHT
Trigger: AGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGAC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TGGAATGACTTCCGCTGTGTGGTTTCCATTTGCTTCGATCTTCCCAGGTTCTCCTGCTGCCCCTCCTCCTaGGTGGCACAGGTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: WNDFRCVVSICFDLPRFSCCPSS*VAQVLF
Trigger: AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA...GGAGAACCTGGGAAGATCGAAGCAAATGGAAACCACACAGCGGAAGTCATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR TCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTATTTTTCTTCCTGCTaGTCTCTGGTGAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVYFSSC*SLVSFS
Trigger: TGAGAAACTCACCAGAGATCAGCAGGAAGAAAAATA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTATTTTTCTTCCTGCTaGTCTCTGGTGAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: ERWIPILVQGEVTWDACPYFSSC*SLVSFS
Trigger: TGAGAAACTCACCAGAGATCAGCAGGAAGAAAAATA...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTTTAGTGTGTCTTCTTaGTTTGATCATTCCGTCCTC +
Preference number: 2 (lower is better)
Translates to: ERWIPILVQGEVTWDACPFSVSS*FDHSVL
Trigger: GAGGACGGAATGATCAAATCAAGAAGACACACTAAA...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTGTCGTACACTGCACTTaGTCAGTGTGCATTTCAGTG +
Preference number: 2 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFVVHCT*SVCISV
Trigger: CACTGAAATGCACACTGAGCAAGTGCAGTGTACGAC...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCGTGTCACTGACGTGTaGTGGAAGCAGCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFRVTDV*WKQLTH
Trigger: GTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR CAA 90 bp GCTAACCTAATGGGGGCACTGCTGGGATGGTTACTAGTGATTGGCTaGCTGAAAGGGGTCTACATCTCAGAGCCAGTACACAATACAGCG +
Preference number: 2 (lower is better)
Translates to: ANLMGALLGWLLVIG*LKGVYISEPVHNTA
Trigger: CGCTGTATTGTGTACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCACTAGTAACCATCCCAGCAGTGCCCCCATTAGGTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR GCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAATGCACTTGCTCAGTGTaGATTTCAGTGCCGGGAATG +
Preference number: 2 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKCTCSV*ISVPGM
Trigger: CATTCCCGGCACTGAAATGCACACTGAGCAAGTGCA...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTTGCTGCCCCTCCTCCTaGGTGGCACAGGTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPCCPSS*VAQVLF
Trigger: AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCACAGGGTGAAGTCACTTaGGACGCCTGTCCTTGGATG +
Preference number: 2 (lower is better)
Translates to: LKNMASCVVHCTCSVCISQGEVT*DACPWM
Trigger: CATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTG...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAGTGGTAACTGAAGGCTaGCCGCCCCGGGAAGTCTCG +
Preference number: 2 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKVVTEG*PPREVS
Trigger: CGAGACTTCCCGGGGCGGCCAGCCTTCAGTTACCAC...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCAATACTGGCAGTATaGCCAAGTGGTCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSILAV*PSGPGL
Trigger: CAGTCCAGGACCACTTGGTCATACTGCCAGTATTGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 16 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182665.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
3UTR-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCCTGCTGATCTCTGGTaGGTTTCTCAATACTGGCAG +
Preference number: 2 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFPADLW*VSQYWQ
Trigger: CTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182665.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
3UTR-3UTR TCA 90 bp TTCCCAGGTTCTCCCGTGAGGTATGAGGTAATAGAATCCCGAGCCTGGTCAGAGTGTGTCTTCTTGATTTaGTCATTCCGTCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: FPGSPVRYEVIESRAWSECVFLI*SFRPLL
Trigger: CAGCAGAGGACGGAATGATCAAATCAAGAAGACACA...CTCTGACCAGGCTCGGGATTCTATTACCTCATACCTCACGGGAGAACCTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR TCA 90 bp CAGTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTTTTAGTGTGTCTTCTTaGTTTGATCATTCCGTCCTC +
Preference number: 2 (lower is better)
Translates to: QLVFELALGTLGFHLASRFSVSS*FDHSVL
Trigger: GAGGACGGAATGATCAAATCAAGAAGACACACTAAA...ACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR TCA 90 bp CTAGTGATTGGCTTGCTGAAAGGGGTCTACATCTCAGAGCCAGTACACAATACAGACTGGGGCCTCTTGTaGGCACCATCCACTTCTACA +
Preference number: 2 (lower is better)
Translates to: LVIGLLKGVYISEPVHNTDWGLL*APSTST
Trigger: TGTAGAAGTGGATGGTGCTCACAAGAGGCCCCAGTC...TGTATTGTGTACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR GCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGTCGTACACTGCACTTaGTCAGTGTGCATTTCAGTG +
Preference number: 2 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKVVHCT*SVCISV
Trigger: CACTGAAATGCACACTGAGCAAGTGCAGTGTACGAC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTCAATACTGGCAGTATaGCCAAGTGGTCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFSILAV*PSGPGL
Trigger: CAGTCCAGGACCACTTGGTCATACTGCCAGTATTGA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATCAATACTGGCAGTATaGCCAAGTGGTCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: LKNMASCVVHCTCSVCISSILAV*PSGPGL
Trigger: CAGTCCAGGACCACTTGGTCATACTGCCAGTATTGA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCCTGCTGATCTCTGGTaGGTTTCTCAATACTGGCAG +
Preference number: 2 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFPADLW*VSQYWQ
Trigger: CTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTATTTTTCTTCCTGCTaGTCTCTGGTGAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVYFSSC*SLVSFS
Trigger: TGAGAAACTCACCAGAGATCAGCAGGAAGAAAAATA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182665.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
3UTR-3UTR TCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTATTTTTCTTCCTGCTaGTCTCTGGTGAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFYFSSC*SLVSFS
Trigger: TGAGAAACTCACCAGAGATCAGCAGGAAGAAAAATA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATGTCACTGACGTGTGGTaGAAGCAGCTGACCCACACT +
Preference number: 2 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDVTDVW*KQLTHT
Trigger: AGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGAC...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGTCACTGACGTGTGGTaGAAGCAGCTGACCCACACT +
Preference number: 2 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVVTDVW*KQLTHT
Trigger: AGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGAC...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGCCCCTCCTCCTGGGTaGCACAGGTGTTGTTTTGTC +
Preference number: 2 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLAPPPG*HRCCFV
Trigger: GACAAAACAACACCTGTGCCACCCAGGAGGAGGGGC...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTACAGGGTGAAGTCACTTaGGACGCCTGTCCTTGGATG +
Preference number: 2 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVQGEVT*DACPWM
Trigger: CATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTG...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp GGCGACACTGGTTCCTCAGTGCGACCACATCCGTGTGTTTTTGGTTTCAGGTTCCATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 2 (lower is better)
Translates to: GDTGSSVRPHPCVFGFRFHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...GAACCTGAAACCAAAAACACACGGATGTGGTCGCACTGAGGAACCAGTGTCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTCAATACTGGCAGTATaGCCAAGTGGTCCTGGACTG +
Preference number: 2 (lower is better)
Translates to: IIANIQESVKESRERWIPSILAV*PSGPGL
Trigger: CAGTCCAGGACCACTTGGTCATACTGCCAGTATTGA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp TTCCCAGGTTCTCCCGTGAGGTATGAGGTAATAGAATCCCGAGCCTGGTCAGAGGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 2 (lower is better)
Translates to: FPGSPVRYEVIESRAWSEVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...CTCTGACCAGGCTCGGGATTCTATTACCTCATACCTCACGGGAGAACCTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR GCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAACGCCTGTCCTTGGATaGATTTGTGATATCTTTGTG +
Preference number: 2 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKTPVLG*ICDIFV
Trigger: CACAAAGATATCACAAATGCATCCAAGGACAGGCGT...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp GGCGACACTGGTTCCTCAGTGCGACCACATCCGTGTGTTTTTGGTTTCAGGTTCCTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 2 (lower is better)
Translates to: GDTGSSVRPHPCVFGFRFLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...GAACCTGAAACCAAAAACACACGGATGTGGTCGCACTGAGGAACCAGTGTCGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR CCA 90 bp GGTTTAGGTGCGTCTTCTATGACAAGCTTGCTGGTTTCTTCCAGAGATTTCTGGATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 2 (lower is better)
Translates to: GLGASSMTSLLVSSRDFWIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...CCAGAAATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGACGCACCTAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CAA 90 bp TGGCTTCTTTCTGGGCTCCTCACGGTCAAATGTGAGCGGGAGGCTTaGAAGAAAGTCAAGCAAACCACTTTTCCATCGACGTTTATTAAC +
Preference number: 2 (lower is better)
Translates to: WLLSGLLTVKCEREA*KKVKQTTFPSTFIN
Trigger: GTTAATAAACGTCGATGGAAAAGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAGCCCAGAAAGAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR CAA 90 bp GTCGCACAGGAAGCCAAGGGTCGCAATGAGAGTTCACGTGTAGACTaGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAAT +
Preference number: 2 (lower is better)
Translates to: VAQEAKGRNESSRVD*SLKHWASSTTTNTN
Trigger: ATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGAACTCTCATTGCGACCCTTGGCTTCCTGTGCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
3UTR-3UTR TCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATGTGTCTTCTTGATTTaGTCATTCCGTCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: LKNMASCVVHCTCSVCISCVFLI*SFRPLL
Trigger: CAGCAGAGGACGGAATGATCAAATCAAGAAGACACA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATGCACTTGCTCAGTGTaGATTTCAGTGCCGGGAATG +
Preference number: 2 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVCTCSV*ISVPGM
Trigger: CATTCCCGGCACTGAAATGCACACTGAGCAAGTGCA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCGTGTCACTGACGTGTaGTGGAAGCAGCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: FFENDTKLLETGSEEHGFRVTDV*WKQLTH
Trigger: GTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp CTCCTCACGGTCAAATGTGAGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCACTCTGGTACTTGTCTTCTaGCTGGAATTCTGGAGAATA +
Preference number: 2 (lower is better)
Translates to: LLTVKCEREALKKVKQTTLVLVF*LEFWRI
Trigger: TATTCTCCAGAATTCCAGCCAGAAGACAAGTACCAG...AGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACCTGCTGATCTCTGGTaGGTTTCTCAATACTGGCAG +
Preference number: 2 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLPADLW*VSQYWQ
Trigger: CTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp TCCGTGTGTTTTTGGTTTCAGGTTCTCCTTGATGCTCTGTTTCCCTATATCGTTCCTGCTGATCTCTGGTaGGTTTCTCAATACTGGCAG +
Preference number: 2 (lower is better)
Translates to: SVCFWFQVLLDALFPYIVPADLW*VSQYWQ
Trigger: CTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGG...AACGATATAGGGAAACAGAGCATCAAGGAGAACCTGAAACCAAAAACACACGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTGTGTCTTCTTGATTTaGTCATTCCGTCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: IIANIQESVKESRERWIPCVFLI*SFRPLL
Trigger: CAGCAGAGGACGGAATGATCAAATCAAGAAGACACA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTTTAGTGTGTCTTCTTaGTTTGATCATTCCGTCCTC +
Preference number: 2 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIFSVSS*FDHSVL
Trigger: GAGGACGGAATGATCAAATCAAGAAGACACACTAAA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATCCCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILSLLRL*PGGPLF
Trigger: GAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGGA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCGTGTCACTGACGTGTaGTGGAAGCAGCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: NLVILVCLLDLIIPSSAARVTDV*WKQLTH
Trigger: GTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAACGTGTCACTGACGTGTaGTGGAAGCAGCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: LQIKSPMLQETVVFAKLERVTDV*WKQLTH
Trigger: GTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATACGTGTCACTGACGTGTaGTGGAAGCAGCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIRVTDV*WKQLTH
Trigger: GTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTCGTGTCACTGACGTGTaGTGGAAGCAGCTGACCCAC +
Preference number: 2 (lower is better)
Translates to: FTELQNSSFGELFKFAAGRVTDV*WKQLTH
Trigger: GTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAGCCCCTCCTCCTGGGTaGCACAGGTGTTGTTTTGTC +
Preference number: 2 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIAPPPG*HRCCFV
Trigger: GACAAAACAACACCTGTGCCACCCAGGAGGAGGGGC...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAATGCTGCCCCTCCTCCTaGGTGGCACAGGTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: LQIKSPMLQETVVFAKLECCPSS*VAQVLF
Trigger: AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATATTTTTCTTCCTGCTaGTCTCTGGTGAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: LKNMASCVVHCTCSVCISYFSSC*SLVSFS
Trigger: TGAGAAACTCACCAGAGATCAGCAGGAAGAAAAATA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTATTTTTCTTCCTGCTaGTCTCTGGTGAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFYFSSC*SLVSFS
Trigger: TGAGAAACTCACCAGAGATCAGCAGGAAGAAAAATA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATATTTTTCTTCCTGCTaGTCTCTGGTGAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTYFSSC*SLVSFS
Trigger: TGAGAAACTCACCAGAGATCAGCAGGAAGAAAAATA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp GTCTTCTATGACAAGCTTGCTGGTTTCTTCCAGAGATTTCTGGTAGGCTGTGAGGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 2 (lower is better)
Translates to: VFYDKLAGFFQRFLVGCEVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...CTCACAGCCTACCAGAAATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAGTCGTACACTGCACTTaGTCAGTGTGCATTTCAGTG +
Preference number: 2 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKVVHCT*SVCISV
Trigger: CACTGAAATGCACACTGAGCAAGTGCAGTGTACGAC...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 2 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTGTCACTGACGTGTGGTaGAAGCAGCTGACCCACACT +
Preference number: 2 (lower is better)
Translates to: FTELQNSSFGELFKFAAGVTDVW*KQLTHT
Trigger: AGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGAC...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATGCTGCCCCTCCTCCTaGGTGGCACAGGTGTTGTTT +
Preference number: 2 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILCCPSS*VAQVLF
Trigger: AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTCAGGGTGAAGTCACTTaGGACGCCTGTCCTTGGATG +
Preference number: 2 (lower is better)
Translates to: FTELQNSSFGELFKFAAGQGEVT*DACPWM
Trigger: CATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTG...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR CAA 90 bp CAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATTACTaGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCGTACACTGC +
Preference number: 2 (lower is better)
Translates to: QVLFCLSSLKMTLNY*RPGLKNMASCVVHC
Trigger: GCAGTGTACGACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCCTGCTGATCTCTGGTaGGTTTCTCAATACTGGCAG +
Preference number: 2 (lower is better)
Translates to: FFENDTKLLETGSEEHGFPADLW*VSQYWQ
Trigger: CTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTATTTTTCTTCCTGCTaGTCTCTGGTGAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: IIANIQESVKESRERWIPYFSSC*SLVSFS
Trigger: TGAGAAACTCACCAGAGATCAGCAGGAAGAAAAATA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTATTTTTCTTCCTGCTaGTCTCTGGTGAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMYFSSC*SLVSFS
Trigger: TGAGAAACTCACCAGAGATCAGCAGGAAGAAAAATA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAACGCCTGTCCTTGGATaGATTTGTGATATCTTTGTG +
Preference number: 2 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVTPVLG*ICDIFV
Trigger: CACAAAGATATCACAAATGCATCCAAGGACAGGCGT...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CAA 90 bp CATCATGCAAATGACATGCAAATGTACTCTCTGCCTCTTTGTTTATaGAAAGCGGCTTCTCTAGACCAAATAGGCTCTCTGGTACTTGTC +
Preference number: 2 (lower is better)
Translates to: HHANDMQMYSLPLCL*KAASLDQIGSLVLV
Trigger: GACAAGTACCAGAGAGCCTATTTGGTCTAGAGAAGCCGCTTTCAATAAACAAAGAGGCAGAGAGTACATTTGCATGTCATTTGCATGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR TCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATACCTGCTGATCTCTGGTaGGTTTCTCAATACTGGCAG +
Preference number: 2 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIPADLW*VSQYWQ
Trigger: CTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGG...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTGCTGATCTCTGGTaGGTTTCTCAATACTGGCAG +
Preference number: 2 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAPADLW*VSQYWQ
Trigger: CTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAACCTGCTGATCTCTGGTaGGTTTCTCAATACTGGCAG +
Preference number: 2 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEPADLW*VSQYWQ
Trigger: CTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGG...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTATTTTTCTTCCTGCTaGTCTCTGGTGAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDYFSSC*SLVSFS
Trigger: TGAGAAACTCACCAGAGATCAGCAGGAAGAAAAATA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp GTCTTCTATGACAAGCTTGCTGGTTTCTTCCAGAGATTTCTGGTAGGCTGTGAGCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 2 (lower is better)
Translates to: VFYDKLAGFFQRFLVGCEPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...CTCACAGCCTACCAGAAATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR GCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATATGCACTTGCTCAGTGTaGATTTCAGTGCCGGGAATG +
Preference number: 2 (lower is better)
Translates to: KERNSVYTLTVSLGPRKICTCSV*ISVPGM
Trigger: CATTCCCGGCACTGAAATGCACACTGAGCAAGTGCA...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACCTGCTGATCTCTGGTaGGTTTCTCAATACTGGCAG +
Preference number: 2 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILPADLW*VSQYWQ
Trigger: CTGCCAGTATTGAGAAACTCACCAGAGATCAGCAGG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATATTTTTCTTCCTGCTaGTCTCTGGTGAGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLYFSSC*SLVSFS
Trigger: TGAGAAACTCACCAGAGATCAGCAGGAAGAAAAATA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATTTAGTGTGTCTTCTTaGTTTGATCATTCCGTCCTC +
Preference number: 2 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLFSVSS*FDHSVL
Trigger: GAGGACGGAATGATCAAATCAAGAAGACACACTAAA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAAGTCGTACACTGCACTTaGTCAGTGTGCATTTCAGTG +
Preference number: 2 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEVVHCT*SVCISV
Trigger: CACTGAAATGCACACTGAGCAAGTGCAGTGTACGAC...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTGTCGTACACTGCACTTaGTCAGTGTGCATTTCAGTG +
Preference number: 2 (lower is better)
Translates to: FTELQNSSFGELFKFAAGVVHCT*SVCISV
Trigger: CACTGAAATGCACACTGAGCAAGTGCAGTGTACGAC...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 2 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLTSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR TCA 90 bp AATCTCAGGATTTTATCAGTCACAGTTCTTTCTTTCTTTCTCTCTCTCTCTCTCTGTGTCTTCTTGATTTaGTCATTCCGTCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: NLRILSVTVLSFFLSLSLCVFLI*SFRPLL
Trigger: CAGCAGAGGACGGAATGATCAAATCAAGAAGACACA...GAGAGAGAGAGAGAGAAAGAAAGAAAGAACTGTGACTGATAAAATCCTGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR TCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTGTGTCTTCTTGATTTaGTCATTCCGTCCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: FTELQNSSFGELFKFAAGCVFLI*SFRPLL
Trigger: CAGCAGAGGACGGAATGATCAAATCAAGAAGACACA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR GCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCACGCCTGTCCTTGGATaGATTTGTGATATCTTTGTG +
Preference number: 2 (lower is better)
Translates to: FFENDTKLLETGSEEHGFTPVLG*ICDIFV
Trigger: CACAAAGATATCACAAATGCATCCAAGGACAGGCGT...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTTTAGTGTGTCTTCTTaGTTTGATCATTCCGTCCTC +
Preference number: 2 (lower is better)
Translates to: FFENDTKLLETGSEEHGFFSVSS*FDHSVL
Trigger: GAGGACGGAATGATCAAATCAAGAAGACACACTAAA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 2 (lower is better)
Translates to: FFENDTKLLETGSEEHGFKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR GCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAAAACCCAAAGAAAAATaGTCTATAAAACGCGGCAGC +
Preference number: 2 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILKPKEK*SIKRGS
Trigger: GCTGCCGCGTTTTATAGAGCATTTTTCTTTGGGTTT...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 2 (lower is better)
Translates to: FFENDTKLLETGSEEHGFFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 72 bp ATCGCCATCCTGATATCCGTCCGCTCACAAGGACTCTaGGGACCAGTCCTCCTACTGCCGGCCTTTCCTCTC +
Preference number: 3 (lower is better)
Translates to: IAILISVRSQGL*GPVLLLPAFPL
Trigger: GAGAGGAAAGGCCGGCAGTAGGAGGACTGGTCCGCAGAGTCCTTGTGAGCGGACGGATATCAGGATGGCGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 72 bp AGACGGTCCAGTAACCCACCAGTTAGTCTTCGAGCTTaGGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCG +
Preference number: 3 (lower is better)
Translates to: RRSSNPPVSLRA*AGDSRLPLGVS
Trigger: CGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAACTGGTGGGTTACTGGACCGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 72 bp GTCTTTTGGAGTGGGCGGTCTGCTGTTGCCGGAGGTTaGTTCACAAGAGAACCCCTGTTCAGTCTGGTGGCG +
Preference number: 3 (lower is better)
Translates to: VFWSGRSAVAGG*FTREPLFSLVA
Trigger: CGCCACCAGACTGAACAGGGGTTCTCTTGTGAAGCAACCTCCGGCAACAGCAGACCGCCCACTCCAAAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR CAA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTGTCGTACACTGCACTaGCTCAGTGTGCATTTCAGT +
Preference number: 3 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVCRTLH*LSVHFS
Trigger: ACTGAAATGCACACTGAGCAAGTGCAGTGTACGACA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGTCGTACACTGCACTaGCTCAGTGTGCATTTCAGT +
Preference number: 3 (lower is better)
Translates to: ERWIPILVQGEVTWDACPCRTLH*LSVHFS
Trigger: ACTGAAATGCACACTGAGCAAGTGCAGTGTACGACA...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGGTGGCACAGGTGTaGTTTTGTCTGTCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: ERWIPILVQGEVTWDACPWVAQV*FCLSSL
Trigger: CAAAGAAGACAGACAAAACAACACCTGTGCCACCCA...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTGCATTTGTGATATCTTaGTGTTCTGTGAGGCGGGTG +
Preference number: 3 (lower is better)
Translates to: ERWIPILVQGEVTWDACPAFVIS*CSVRRV
Trigger: CACCCGCCTCACAGAACACAAAGATATCACAAATGC...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR TCA 72 bp AGTTCCCTTGCCAGCTCTGTCCAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATCCTGATATCCGTCCGC +
Preference number: 3 (lower is better)
Translates to: SSLASSVQLSPR*SATIAILISVR
Trigger: GCGGACGGATATCAGGATGGCGATAGTAGCCGATCACCTGGGACTTAGTTGGACAGAGCTGGCAAGGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR TCA 72 bp GCTTGCTGGTTTCTTCCAGAGATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCTCAGTGCGACCACATC +
Preference number: 3 (lower is better)
Translates to: ACWFLPEISGRL*GATLVPQCDHI
Trigger: GATGTGGTCGCACTGAGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAATCTCTGGAAGAAACCAGCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR TCA 72 bp CGTCTTCACCTTATAGCCTTCTCCCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTCTTCCTGGAGGTTGAG +
Preference number: 3 (lower is better)
Translates to: RLHLIAFSLLRL*PGGPLFFLEVE
Trigger: CTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGGAGAAGGCTATAAGGTGAAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR CAA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCACCCTGACAGTTAGTTaGGGTCCGAGAAAAATAAGG +
Preference number: 3 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVTLTVS*GPRKIR
Trigger: CCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR CCA 72 bp TTCTTATTTCTAGCAGACTTCGTGGTAACTGAAGGCTaGCCGCCCCGGGAAGTCTCGGACAACGACGTGTTC +
Preference number: 3 (lower is better)
Translates to: FLFLADFVVTEG*PPREVSDNDVF
Trigger: GAACACGTCGTTGTCCGAGACTTCCCGGGGCGGCCAGCCTTCAGTTACCACGAAGTCTGCTAGAAATAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CCA 72 bp TTCCAGAGATTTCTGGTAGGCTGTGAGGGGCGACACTaGTTCCTCAGTGCGACCACATCCGTGTGTTTTTGG +
Preference number: 3 (lower is better)
Translates to: FQRFLVGCEGRH*FLSATTSVCFW
Trigger: CCAAAAACACACGGATGTGGTCGCACTGAGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAATCTCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CCA 72 bp AGAGAGCAGAACGTTCCAGAGTATGGCTTTAGTGACTaGAGGCACAGACAGGGCCCCTGTGACTGGGGATTA +
Preference number: 3 (lower is better)
Translates to: REQNVPEYGFSD*RHRQGPCDWGL
Trigger: TAATCCCCAGTCACAGGGGCCCTGTCTGTGCCTCCAGTCACTAAAGCCATACTCTGGAACGTTCTGCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR CAA 90 bp CAGTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTTCCGATTGCATCTTTTaGTCTTCTTCAGTGAGGCGG +
Preference number: 3 (lower is better)
Translates to: QLVFELALGTLGFHLASRSDCIF*SSSVRR
Trigger: CCGCCTCACTGAAGAAGACAAAAAGATGCAATCGGA...ACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR TCA 72 bp CTCTGTTTTCTTATTTCTAGCAGACTTCGTGGTAACTaGAGGCTGGCCGCCCCGGGAAGTCTCGGACAACGA +
Preference number: 3 (lower is better)
Translates to: LCFLISSRLRGN*RLAAPGSLGQR
Trigger: TCGTTGTCCGAGACTTCCCGGGGCGGCCAGCCTTCAGTTACCACGAAGTCTGCTAGAAATAAGAAAACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR TCA 72 bp CCTGTGGCTTCTTTCTGGGCTCCTCACGGTCAAATGTaGGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCAC +
Preference number: 3 (lower is better)
Translates to: PVASFWAPHGQM*AGGFEESQANH
Trigger: GTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAGCCCAGAAAGAAGCCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR TCA 72 bp AGTTGCCTGGCCAACAAATACCCAGATGCCCCTGGATaGGGCACGAAGTTCTATAGTTGCTGTTCCTGTGGC +
Preference number: 3 (lower is better)
Translates to: SCLANKYPDAPG*GTKFYSCCSCG
Trigger: GCCACAGGAACAGCAACTATAGAACTTCGTGCCTCATCCAGGGGCATCTGGGTATTTGTTGGCCAGGCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR CCA 72 bp CCTAATGGGGGCACTGCTGGGATGGTTACTAGTGATTaGCTTGCTGAAAGGGGTCTACATCTCAGAGCCAGT +
Preference number: 3 (lower is better)
Translates to: PNGGTAGMVTSD*LAERGLHLRAS
Trigger: ACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCACTAGTAACCATCCCAGCAGTGCCCCCATTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR CAA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCGTACACTGCACTaGCTCAGTGTGCATTTCAGT +
Preference number: 3 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFCRTLH*LSVHFS
Trigger: ACTGAAATGCACACTGAGCAAGTGCAGTGTACGACA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTGGCACAGGTGTTGTTTaGTCTGTCTTCTTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: ERWIPILVQGEVTWDACPGTGVV*SVFFEN
Trigger: ATTTTCAAAGAAGACAGACAAAACAACACCTGTGCC...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGACAACGACGTGTTCCTaGAGGTACTTTCTTCCTCAT +
Preference number: 3 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGTTTCS*RYFLPH
Trigger: ATGAGGAAGAAAGTACCTCAAGGAACACGTCGTTGT...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR TCA 72 bp CTGGGCTCCTCACGGTCAAATGTGAGCGGGAGGCTTTaGAGAAAGTCAAGCAAACCACTTTTCCATCGACGT +
Preference number: 3 (lower is better)
Translates to: LGSSRSNVSGRL*RKSSKPLFHRR
Trigger: ACGTCGATGGAAAAGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR GCA 72 bp TCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATaGATTTGTGATATCTTTGTGTTCTGTGAGGCGGGT +
Preference number: 3 (lower is better)
Translates to: SRVKSLGTPVLG*ICDIFVFCEAG
Trigger: ACCCGCCTCACAGAACACAAAGATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR GCA 72 bp GCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTTCTaGCAACCATCAACTGGGTCATGGAAAACATTGTTT +
Preference number: 3 (lower is better)
Translates to: AGDSRLPLGVSF*QPSTGSWKTLF
Trigger: AAACAATGTTTTCCATGACCCAGTTGATGGTTGGCAGAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CCA 72 bp AATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTaGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGG +
Preference number: 3 (lower is better)
Translates to: NIQESVKESRER*IPILVQGEVTW
Trigger: CCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAATGGGTGGCACAGGTGTaGTTTTGTCTGTCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKWVAQV*FCLSSL
Trigger: CAAAGAAGACAGACAAAACAACACCTGTGCCACCCA...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGCATTTGTGATATCTTaGTGTTCTGTGAGGCGGGTG +
Preference number: 3 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKAFVIS*CSVRRV
Trigger: CACCCGCCTCACAGAACACAAAGATATCACAAATGC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR TCA 72 bp ACTTTCAGGTGTGGCAGCTTGTCGTTTAGATGTTTCTaGTTGGCAGGGGTTGGGGGTGTAGACACAGACATC +
Preference number: 3 (lower is better)
Translates to: TFRCGSLSFRCF*LAGVGGVDTDI
Trigger: GATGTCTGTGTCTACACCCCCAACCCCTGCCAATCAGAAACATCTAAACGACAAGCTGCCACACCTGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR TCA 72 bp CATGGAGAGAAACTTCCATTGTATGGAGCCCCAAGGTaGCGGCTAAGAAGAACATGGTGGGATGCTGGGATA +
Preference number: 3 (lower is better)
Translates to: HGEKLPLYGAPR*RLRRTWWDAGI
Trigger: TATCCCAGCATCCCACCATGTTCTTCTTAGCCGTCACCTTGGGGCTCCATACAATGGAAGTTTCTCTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR TCA 72 bp ACTATCCAAGGTCGCACAGGAAGCCAAGGGTCGCAATaGGAGTTCACGTGTAGACTTGTCTCTGAAACACTG +
Preference number: 3 (lower is better)
Translates to: TIQGRTGSQGSQ*EFTCRLVSETL
Trigger: CAGTGTTTCAGAGACAAGTCTACACGTGAACTCTCATTGCGACCCTTGGCTTCCTGTGCGACCTTGGATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
3UTR CCA 72 bp GGTTTTGCCTTTGCTTCTGGAATGACTTCCGCTGTGTaGTTTCCATTTGCTTCGATCTTCCCAGGTTCTCCC +
Preference number: 3 (lower is better)
Translates to: GFAFASGMTSAV*FPFASIFPGSP
Trigger: GGGAGAACCTGGGAAGATCGAAGCAAATGGAAACCACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAACCCACACTCCACTCTaGGTGACTATTTTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKTHTPL*VTIFLP
Trigger: AGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGT...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTGTCGTACACTGCACTaGCTCAGTGTGCATTTCAGT +
Preference number: 3 (lower is better)
Translates to: LSRVKSLGTPVLGCICDICRTLH*LSVHFS
Trigger: ACTGAAATGCACACTGAGCAAGTGCAGTGTACGACA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAACCCTGACAGTTAGTTaGGGTCCGAGAAAAATAAGG +
Preference number: 3 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKTLTVS*GPRKIR
Trigger: CCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp CAGTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTTCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 3 (lower is better)
Translates to: QLVFELALGTLGFHLASRSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...ACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 72 bp ATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTaGATTTCAGTGCCGGGAATGAATGTGAGTTTCCAT +
Preference number: 3 (lower is better)
Translates to: MASCVVHCTCSV*ISVPGMNVSFH
Trigger: ATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR GCA 72 bp CCCTATATCGTTTTGGGATTCCGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGACTTCCGCTGTGTGGTT +
Preference number: 3 (lower is better)
Translates to: PYIVLGFREVGF*LCFWNDFRCVV
Trigger: AACCACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCGGAATCCCAAAACGATATAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 72 bp CATCTTTTTCATGCCGACAGGCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTTGCTGGTTTCTTCCAG +
Preference number: 3 (lower is better)
Translates to: HLFHADRHTGFR*VFYDKLAGFFQ
Trigger: CTGGAAGAAACCAGCAAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTGCCTGTCGGCATGAAAAAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 72 bp AGAAAAATGACTCTCCTTCCTCTAGTCACCGTCAACTaGCAATTGCTTCTCAGACAGAGTGGAGTGCGTTGG +
Preference number: 3 (lower is better)
Translates to: RKMTLLPLVTVN*QLLLRQSGVRW
Trigger: CCAACGCACTCCACTCTGTCTGAGAAGCAATTGGCAGTTGACGGTGACTAGAGGAAGGAGAGTCATTTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
3UTR CCA 72 bp TTGGGATTCCGGGAAGTAGGGTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTGGTTTCCATTTGCTTC +
Preference number: 3 (lower is better)
Translates to: LGFREVGFCLCF*NDFRCVVSICF
Trigger: GAAGCAAATGGAAACCACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCGGAATCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGGCACAGGTGTTGTTTaGTCTGTCTTCTTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKGTGVV*SVFFEN
Trigger: ATTTTCAAAGAAGACAGACAAAACAACACCTGTGCC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTGGGTGGCACAGGTGTaGTTTTGTCTGTCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: IIANIQESVKESRERWIPWVAQV*FCLSSL
Trigger: CAAAGAAGACAGACAAAACAACACCTGTGCCACCCA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATAAAATCTCCCATGTaGCAGGAGACTGTAGTGTTT +
Preference number: 3 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKIKSPM*QETVVF
Trigger: AAACACTACAGTCTCCTGCAACATGGGAGATTTTAT...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR TCA 72 bp AATGTGCCATGCCTGGCTGTGGGCCGGGGTAAAAGTTaGATCAAAGGCATGAGATCTTTGAACTCTTTGAGT +
Preference number: 3 (lower is better)
Translates to: NVPCLAVGRGKS*IKGMRSLNSLS
Trigger: ACTCAAAGAGTTCAAAGATCTCATGCCTTTGATTCAACTTTTACCCCGGCCCACAGCCAGGCATGGCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR GCA 72 bp ATCGTTTTGGGATTCCGGGAAGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGCTGTGTGGTTTCCATT +
Preference number: 3 (lower is better)
Translates to: IVLGFREVGFCL*FWNDFRCVVSI
Trigger: AATGGAAACCACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCGGAATCCCAAAACGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR GCA 72 bp AAATTCTTAGCTCCCCCACAAAGTGCACAGAGTTTATaGAAGGTGGGTGTTTTCGGGAGAGAGCAGAACGTT +
Preference number: 3 (lower is better)
Translates to: KFLAPPQSAQSL*KVGVFGREQNV
Trigger: AACGTTCTGCTCTCTCCCGAAAACACCCACCTTGCATAAACTCTGTGCACTTTGTGGGGGAGCTAAGAATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR CCA 72 bp GATGCTCCCTGGGAACAGCATAACTTCTTGACACACTaGCCTTATAAATCCCATCTTCTTCTATGGGGCAGA +
Preference number: 3 (lower is better)
Translates to: DAPWEQHNFLTH*PYKSHLLLWGR
Trigger: TCTGCCCCATAGAAGAAGATGGGATTTATAAGGCCAGTGTGTCAAGAAGTTATGCTGTTCCCAGGGAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR CAA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATGGGTGGCACAGGTGTaGTTTTGTCTGTCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVWVAQV*FCLSSL
Trigger: CAAAGAAGACAGACAAAACAACACCTGTGCCACCCA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTACCCTGACAGTTAGTTaGGGTCCGAGAAAAATAAGG +
Preference number: 3 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPTLTVS*GPRKIR
Trigger: CCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR TCA 72 bp GACCACATCCGTGTGTTTTTGGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATATCGTTTTGGGATTCCG +
Preference number: 3 (lower is better)
Translates to: DHIRVFLVSGSP*CSVSLYRFGIP
Trigger: CGGAATCCCAAAACGATATAGGGAAACAGAGCATCAAGGAGAACCTGAAACCAAAAACACACGGATGTGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CCA 72 bp TTAGGAAATGATACACCTTTTAATATGCCAGTTGCCTaGCCAACAAATACCCAGATGCCCCTGGATGAGGCA +
Preference number: 3 (lower is better)
Translates to: LGNDTPFNMPVA*PTNTQMPLDEA
Trigger: TGCCTCATCCAGGGGCATCTGGGTATTTGTTGGCCAGGCAACTGGCATATTAAAAGGTGTATCATTTCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR CAA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATACCCACACTCCACTCTaGGTGACTATTTTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDTHTPL*VTIFLP
Trigger: AGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGT...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATGTCGTACACTGCACTaGCTCAGTGTGCATTTCAGT +
Preference number: 3 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLCRTLH*LSVHFS
Trigger: ACTGAAATGCACACTGAGCAAGTGCAGTGTACGACA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAATCAGACAACTCCGATaGCATCTTTTTGTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LKNMASCVVHCTCSVCISIRQLR*HLFVFF
Trigger: GAAGAAGACAAAAAGATGCAATCGGAGTTGTCTGAT...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTACCCACACTCCACTCTaGGTGACTATTTTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCTHTPL*VTIFLP
Trigger: AGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGT...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGGCACAGGTGTTGTTTaGTCTGTCTTCTTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: IIANIQESVKESRERWIPGTGVV*SVFFEN
Trigger: ATTTTCAAAGAAGACAGACAAAACAACACCTGTGCC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGCACAGGTGTTGTTTaGTCTGTCTTCTTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPGTGVV*SVFFEN
Trigger: ATTTTCAAAGAAGACAGACAAAACAACACCTGTGCC...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR TCA 72 bp AATCAAAGGCATGAGATCTTTGAACTCTTTGAGTTATaGAATCAGTGGGCCCCAAACTCCAAGTGCCTCTCA +
Preference number: 3 (lower is better)
Translates to: NQRHEIFELFEL*NQWAPNSKCLS
Trigger: TGAGAGGCACTTGGAGTTTGGGGCCCACTGATTTCATAACTCAAAGAGTTCAAAGATCTCATGCCTTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR CCA 72 bp ACACGGACAAGTGCATGTAGTTCCCCGCTGTGGGAATaGCAATCACTTACATGTATTTTCTCTATAAGAGTT +
Preference number: 3 (lower is better)
Translates to: TRTSACSSPLWE*QSLTCIFSIRV
Trigger: AACTCTTATAGAGAAAATACATGTAAGTGATTGCCATTCCCACAGCGGGGAACTACATGCACTTGTCCGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
3UTR-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTGTCGTACACTGCACTaGCTCAGTGTGCATTTCAGT +
Preference number: 3 (lower is better)
Translates to: FFENDTKLLETGSEEHGFCRTLH*LSVHFS
Trigger: ACTGAAATGCACACTGAGCAAGTGCAGTGTACGACA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR GCA 72 bp GTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATaGTTTGTAGATCGGCTCATGCTAAATGAAAGAAAA +
Preference number: 3 (lower is better)
Translates to: VHFSAGNECEFP*FVDRLMLNERK
Trigger: TTTTCTTTCATTTAGCATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCACCCACACTCCACTCTaGGTGACTATTTTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: FFENDTKLLETGSEEHGFTHTPL*VTIFLP
Trigger: AGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGT...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTGTCGTACACTGCACTaGCTCAGTGTGCATTTCAGT +
Preference number: 3 (lower is better)
Translates to: FTELQNSSFGELFKFAAGCRTLH*LSVHFS
Trigger: ACTGAAATGCACACTGAGCAAGTGCAGTGTACGACA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTGGGTGGCACAGGTGTaGTTTTGTCTGTCTTCTTTG +
Preference number: 3 (lower is better)
Translates to: FTELQNSSFGELFKFAAGWVAQV*FCLSSL
Trigger: CAAAGAAGACAGACAAAACAACACCTGTGCCACCCA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAAGCATTTGTGATATCTTaGTGTTCTGTGAGGCGGGTG +
Preference number: 3 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEAFVIS*CSVRRV
Trigger: CACCCGCCTCACAGAACACAAAGATATCACAAATGC...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAACCCACACTCCACTCTaGGTGACTATTTTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: KERNSVYTLTVSLGPRKITHTPL*VTIFLP
Trigger: AGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGT...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATGTCGTACACTGCACTaGCTCAGTGTGCATTTCAGT +
Preference number: 3 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILCRTLH*LSVHFS
Trigger: ACTGAAATGCACACTGAGCAAGTGCAGTGTACGACA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAGCATTTGTGATATCTTaGTGTTCTGTGAGGCGGGTG +
Preference number: 3 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILAFVIS*CSVRRV
Trigger: CACCCGCCTCACAGAACACAAAGATATCACAAATGC...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR CCA 72 bp CTTAAGACCCACAGCAAATTTCATACATGTATACAATaGGTTATGATCATAACCACCCTCCGATTACCCTCT +
Preference number: 3 (lower is better)
Translates to: LKTHSKFHTCIQ*VMIITTLRLPS
Trigger: AGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATACATGTATGAAATTTGCTGTGGGTCTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
3UTR-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCGGCACAGGTGTTGTTTaGTCTGTCTTCTTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: FFENDTKLLETGSEEHGFGTGVV*SVFFEN
Trigger: ATTTTCAAAGAAGACAGACAAAACAACACCTGTGCC...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAACCCTGACAGTTAGTTaGGGTCCGAGAAAAATAAGG +
Preference number: 3 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILTLTVS*GPRKIR
Trigger: CCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGGCACAGGTGTTGTTTaGTCTGTCTTCTTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAGTGVV*SVFFEN
Trigger: ATTTTCAAAGAAGACAGACAAAACAACACCTGTGCC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR TCA 72 bp CCAGAGGATACAAGAACACTGTGGAACCCAAGTAGGTaGAGAGTTGAACACAGTTTATTTTATATGCTTAAA +
Preference number: 3 (lower is better)
Translates to: PEDTRTLWNPSR*RVEHSLFYMLK
Trigger: TTTAAGCATATAAAATAAACTGTGTTCAACTCTTCACCTACTTGGGTTCCACAGTGTTCTTGTATCCTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAGGCACAGGTGTTGTTTaGTCTGTCTTCTTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILGTGVV*SVFFEN
Trigger: ATTTTCAAAGAAGACAGACAAAACAACACCTGTGCC...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 3 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTTACCAGGCGGCACGTaGTGCGGGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCLPGGT*CGWGPY
Trigger: GTACGGCCCCCACCCGCATCACGTGCCGCCTGGTAA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTTACCAGGCGGCACGTaGTGCGGGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTLPGGT*CGWGPY
Trigger: GTACGGCCCCCACCCGCATCACGTGCCGCCTGGTAA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCSSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTGTCATTCCGTGCGGTaGAGTCCACAGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVCHSVR*SPQQPL
Trigger: GAGCGGCTGCTGTGGACTTCACCGCACGGAATGACA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTGCGGCTGCGTGGGGTaGGGCTCCCTGGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVCGCVG*GSLVQE
Trigger: CTCTTGGACCAGGGAGCCTCACCCCACGCAGCCGCA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCAGAGCCACGGCCAATaGCGTGAAGCCGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVQSHGQ*REAVLC
Trigger: ACAGAGGACGGCTTCACGCCATTGGCCGTGGCTCTG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCACGTGCCCTTCCTGTaGCGCAAGATGGACGGACGC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTHVPFL*RKMDGR
Trigger: GCGTCCGTCCATCTTGCGGCACAGGAAGGGCACGTG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTGACACCATGTCCACGTaGCCTTCCTGTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPDTMST*PSCAAR
Trigger: TCTTGCGGCACAGGAAGGGCACGTGGACATGGTGTC...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTCTACCACCTGCTCATaGCCACTTCTCGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVSTTCS*PLLAPQ
Trigger: CTGTGGGGCGAGAAGTGGCCATGAGCAGGTGGTAGA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTCCACATGGGCCCCCTaGTTGACAAGGACCTCGGCC +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCSTWAP*LTRTSA
Trigger: GGCCGAGGTCCTTGTCAACCAGGGGGCCCATGTGGA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGGACGAGGGGCACGGTaGTGCTGCTCAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRGRGAR*CCSESH
Trigger: GTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACGGTCAAATGTGAGCGGGAGGCTTGTCATTCCGTGCGGTaGAGTCCACAGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: LFLWLLSGLLTVKCEREACHSVR*SPQQPL
Trigger: GAGCGGCTGCTGTGGACTTCACCGCACGGAATGACA...AGCCTCCCGCTCACATTTGACCGTGAGGAGCCCAGAAAGAAGCCACAGGAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTAGGACCTATCCGAACTaGAGGAGCGGAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTRTYPN*RSGGWQ
Trigger: CTGCCAGCCTCCGCTCCTTCAGTTCGGATAGGTCCT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAATTACCAGGCGGCACGTaGTGCGGGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKLPGGT*CGWGPY
Trigger: GTACGGCCCCCACCCGCATCACGTGCCGCCTGGTAA...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPISGRL*GATLVP
Trigger: AGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAAT...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTCCCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCSLLRL*PGGPLF
Trigger: GAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGGA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182795.8
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCCCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSLLRL*PGGPLF
Trigger: GAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCGCGTTTGTGTCATTCTaGAGGAGCAGAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVAFVSF*RSRAAA
Trigger: GGCAGCAGCTCTGCTCCTGCAGAATGACACAAACGC...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTGCCTACGTAACCTTCTaGTGGCAGGGAGTCATCACC +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPAYVTF*WQGVIT
Trigger: GGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGC...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACGGTCAAATGTGAGCGGGAGGCTGCAGAGCTGCTGCCTTaGTGTCGTCTTTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LFLWLLSGLLTVKCEREAAELLP*CRLSGL
Trigger: CAGCCCGGAAAGACGACACCAAGGCAGCAGCTCTGC...AGCCTCCCGCTCACATTTGACCGTGAGGAGCCCAGAAAGAAGCCACAGGAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGGGGTGAGGCTCCCTaGTCCAAGAGCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFWGEAP*SKSRRA
Trigger: GGCCCTTCTGCTCTTGGACCAGGGAGCCTCACCCCA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTTCTTTGCGGCTGCGTaGGGTGAGGCTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVFFAAA*GEAPWS
Trigger: GGACCAGGGAGCCTCACCCCACGCAGCCGCAAAGAA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGGGACGAGGGGCACGGTaGTGCTGCTCAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGGRGAR*CCSESH
Trigger: GTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCC...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGGACGAGGGGCACGGTaGTGCTGCTCAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVGRGAR*CCSESH
Trigger: GTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTGCGGCTGCGTGGGGTaGGGCTCCCTGGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLCGCVG*GSLVQE
Trigger: CTCTTGGACCAGGGAGCCTCACCCCACGCAGCCGCA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTCACTCGGTCTTCTTaGGCAGCCAGGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCFTRSS*AARWSG
Trigger: CCCACTCCACCTGGCTGCTCAAGAAGACCGAGTGAA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGTTCCCATTCACAGTaGGTTCATTGGGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPCSHSQ*VHWGRR
Trigger: ACGCCTCCCCCAATGAACTCACTGTGAATGGGAACA...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGAGGACCTATCCGAACTaGAGGAGCGGAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVRTYPN*RSGGWQ
Trigger: CTGCCAGCCTCCGCTCCTTCAGTTCGGATAGGTCCT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTTACCAGGCGGCACGTaGTGCGGGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLLPGGT*CGWGPY
Trigger: GTACGGCCCCCACCCGCATCACGTGCCGCCTGGTAA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCTGCCAACCTGCAAGTaGAGACATTGCCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPLPTCK*RHCQFC
Trigger: GCAGAACTGGCAATGTCTTCACTTGCAGGTTGGCAG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCLLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGGGTCTCGCCCGGACTaGAAGGCCTTCATGATGTCA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTGSRPD*KAFMMS
Trigger: TGACATCATGAAGGCCTTTCAGTCCGGGCGAGACCC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR TCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTGAAAAACTGGGCCCCTaGCTTGGGATCGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCEKLGP*LGIGLL
Trigger: GAGAAGGCCGATCCCAAGTCAGGGGCCCAGTTTTTC...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCCTTGTGTGGCCATGTaGAGTGGCGACAATCCATTC +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPPCVAM*SGDNPF
Trigger: GAATGGATTGTCGCCACTGCACATGGCCACACAAGG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCCCAGAAGTTGTTGCTaGATTGGGGGATGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVPRSCC*IGGCSL
Trigger: CAAGGAGCATCCCCCAATGCAGCAACAACTTCTGGG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTGACACCATGTCCACGTaGCCTTCCTGTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCDTMST*PSCAAR
Trigger: TCTTGCGGCACAGGAAGGGCACGTGGACATGGTGTC...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVSKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTCCTCGAAGTTCTCCTaGTGCTCCAGGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVSSKFS*CSRVLS
Trigger: GGACAAAACCCTGGAGCAGCAGGAGAACTTCGAGGA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCGGGTAGTGATCCTCTaGTCCTCCTCTGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVRVVIL*SSSELE
Trigger: TTCAAGCTCAGAGGAGGAGCAGAGGATCACTACCCG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCTACCACCTGCTCATaGCCACTTCTCGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSTTCS*PLLAPQ
Trigger: CTGTGGGGCGAGAAGTGGCCATGAGCAGGTGGTAGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCGTGGCTATGTCCATCTaGTTCTTCTTGGCCGCGATG +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVVAMSI*FFLAAM
Trigger: CATCGCGGCCAAGAAGAACCAGATGGACATAGCCAC...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGCGTCAGTTGGTGTTCTaGCTGGCGTTGTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRRQLVF*LALCQG
Trigger: CCCCTGACACAACGCCAGCCAGAACACCAACTGACG...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGTCCAGAAGAAACCTaGCGACTTCCAGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPCPEET*RLPGGS
Trigger: AGAACCACCTGGAAGTCGTCAGGTTTCTTCTGGACA...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTGCGGCTGCGTGGGGTaGGGCTCCCTGGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLCGCVG*GSLVQE
Trigger: CTCTTGGACCAGGGAGCCTCACCCCACGCAGCCGCA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATGCGGCTGCGTGGGGTaGGGCTCCCTGGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTCGCVG*GSLVQE
Trigger: CTCTTGGACCAGGGAGCCTCACCCCACGCAGCCGCA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTTACCAGGCGGCACGTaGTGCGGGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLLPGGT*CGWGPY
Trigger: GTACGGCCCCCACCCGCATCACGTGCCGCCTGGTAA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTSSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISSSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGCGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGCCAGTTCTGCTCGCTaGACACGGTTAAGCATAGCC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRASSAR*TRLSIA
Trigger: GGCTATGCTTAACCGTGTTCAGCGAGCAGAACTGGC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTISGRL*GATLVP
Trigger: AGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAAT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGLLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVLLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGCCAGTTTGCTCTGACTaGAAGAGCGGTCAGCCGGCT +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGPVCSD*KSGQPA
Trigger: AGCCGGCTGACCGCTCTTTCAGTCAGAGCAAACTGG...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCAGGAGCAGAGCTGCTaGCTTGGTGTCGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVQEQSC*LGVVFP
Trigger: CGGAAAGACGACACCAAGGCAGCAGCTCTGCTCCTG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTGCGTTTGTGTCATTCTaGAGGAGCAGAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCAFVSF*RSRAAA
Trigger: GGCAGCAGCTCTGCTCCTGCAGAATGACACAAACGC...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGCCTACGTAACCTTCTaGTGGCAGGGAGTCATCACC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTAYVTF*WQGVIT
Trigger: GGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTTCCAGCCGGCTTCAGAATaGCCTCCGTCCAAACATCCT +
Preference number: 4 (lower is better)
Translates to: VSLRACAGDSRLPLGVSFQPASE*PPSKHP
Trigger: AGGATGTTTGGACGGAGGGCATTCTGAAGCCGGCTG...GAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGCCCTGCACGTCATCCTaGTTCCTCTCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRPCTSS*FLSCGP
Trigger: TGGTCCACAAGAGAGGAAGCAGGATGACGTGCAGGG...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTGGCGGCATCAACATTaGCTTCCCTCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCWRHQH*LPSAAA
Trigger: AGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACGGTCAAATGTGAGCGGGAGGCTCTGACGACTTCCAGGTaGTTCTCCTGGGCTGCCATA +
Preference number: 4 (lower is better)
Translates to: LFLWLLSGLLTVKCEREALTTSR*FSWAAI
Trigger: TATGGCAGCCCAGGAGAACCACCTGGAAGTCGTCAG...AGCCTCCCGCTCACATTTGACCGTGAGGAGCCCAGAAAGAAGCCACAGGAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp ATGATCATAACCACCCTCCGATTACCCTCTCCAACACGTCCCTCCACCAACTTATTCCGGGCTGCGATGTaGAGGGCTGGGAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: MIITTLRLPSPTRPSTNLFRAAM*RAGRRT
Trigger: AGTGCGCCTCCCAGCCCTCCACATCGCAGCCCGGAA...TAAGTTGGTGGAGGGACGTGTTGGAGAGGGTAATCGGAGGGTGGTTATGATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTTCCGGGCTGCGATGTaGAGGGCTGGGAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFFRAAM*RAGRRT
Trigger: AGTGCGCCTCCCAGCCCTCCACATCGCAGCCCGGAA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTGTGGCCATGTGCAGTaGCGACAATCCATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVCGHVQ*RQSILG
Trigger: ACCAAGAATGGATTGTCGCCACTGCACATGGCCACA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCACATTGGTGGTGTTTaGGGAGGCTCCATGATGCAT +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVHIGGV*GGSMMH
Trigger: ATGCATCATGGAGCCTCCCCAAACACCACCAATGTG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTAGTCGGGCTGAGATGTaGAGTGGAGTCTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCSRAEM*SGVWSS
Trigger: GGATGACCAGACTCCACTCCACATCTCAGCCCGACT...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTAGCAGCCAGGTGGAGTaGGGTGAGACCGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCSSQVE*GETALI
Trigger: AATAAGAGCGGTCTCACCCCACTCCACCTGGCTGCT...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAACAAGGCGCCGGGCGATaGCCAGAGCTGTGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKQGAGR*PELCSH
Trigger: ATGGGAACACAGCTCTGGCCATCGCCCGGCGCCTTG...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACAGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCCCTCAGGACCGATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATCGGTCCTGAGGG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCCCTCAGGACCGATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATCGGTCCTGAGGG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGGACGAGGGGCACGGTaGTGCTGCTCAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKGRGAR*CCSESH
Trigger: GTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTGGAGGTCCACCTGTTaGATGCTCTATGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVWRSTC*MLYVSL
Trigger: CAGGGAAACATAGAGCATCCAACAGGTGGACCTCCA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CCAGTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTATAGAAGGTCCCCCTaGCTTCCTGCACCGTCTTAC +
Preference number: 4 (lower is better)
Translates to: PVSLRACAGDSRLPLGVSYRRSP*LPAPSY
Trigger: GTAAGACGGTGCAGGAAGCCAGGGGGACCTTCTATA...CGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTTAGTGGGGCTGATTTaGGCTCCTCCTCCTCCGACT +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRLVGLI*APPPPT
Trigger: AGTCGGAGGAGGAGGAGCCCAAATCAGCCCCACTAA...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCTGCCTCTTTCTGGTTaGAAGCTTTTGTGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCLPLSG*KLLWRR
Trigger: CCGCCGCCACAAAAGCTTCCAACCAGAAAGAGGCAG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CAA 72 bp GTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTaGGCGTCTCGTTCTGCCAACCATCAACTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VFELALGTLGFH*ASRSANHQLGH
Trigger: ATGACCCAGTTGATGGTTGGCAGAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGACTCGGTTACGGCTTaGATAGATGCACCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRDSVTA*IDAPCF
Trigger: GAAGCACGGTGCATCTATTCAAGCCGTAACCGAGTC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGACTCGGTTACGGCTTaGATAGATGCACCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTDSVTA*IDAPCF
Trigger: GAAGCACGGTGCATCTATTCAAGCCGTAACCGAGTC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGCTTTTGCTTCTACCTaGGCCCCATCTTGGACCAGA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTAFAST*APSWTR
Trigger: TCTGGTCCAAGATGGGGCTCAGGTAGAAGCAAAAGC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTGTTCCCATTCACAGTaGGTTCATTGGGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCCSHSQ*VHWGRR
Trigger: ACGCCTCCCCCAATGAACTCACTGTGAATGGGAACA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTTACCAGGCGGCACGTaGTGCGGGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMLPGGT*CGWGPY
Trigger: GTACGGCCCCCACCCGCATCACGTGCCGCCTGGTAA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPSSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHREGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTEGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGCAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFISGRL*GATLVP
Trigger: AGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAAT...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGISGRL*GATLVP
Trigger: AGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAAT...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVISGRL*GATLVP
Trigger: AGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAAT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTGTCAGTGTCCCCTGTaGTGGCATCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTCQCPL*WHLHCV
Trigger: CACACAGTGAAGATGCCATCACAGGGGACACTGACA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCGCCATTCTGAGATTGTaGGTTGACATTCGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVAILRL*VDIRSV
Trigger: AACGGAGCGAATGTCAACGCACAATCTCAGAATGGC...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCCTTGTGTGGCCATGTaGAGTGGCGACAATCCATTC +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCPCVAM*SGDNPF
Trigger: GAATGGATTGTCGCCACTGCACATGGCCACACAAGG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGTACCCAGAAGTTGTTaGTGCATTGGGGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRVPRSC*CIGGCS
Trigger: GGAGCATCCCCCAATGCAGCAACAACTTCTGGGTAC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTTCCGTATTTGGCTaGCACGTGCAGAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCLSVFG*HVQRGE
Trigger: TTCACCCCTCTGCACGTGGCAGCCAAATACGGAAAG...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGCTTTCCGTATTTGGCTaGCACGTGCAGAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRLSVFG*HVQRGE
Trigger: TTCACCCCTCTGCACGTGGCAGCCAAATACGGAAAG...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCTTTCCGTATTTGGCTaGCACGTGCAGAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTLSVFG*HVQRGE
Trigger: TTCACCCCTCTGCACGTGGCAGCCAAATACGGAAAG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGCCTACGTAACCTTCTaGTGGCAGGGAGTCATCACC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVAYVTF*WQGVIT
Trigger: GGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGCTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCCTCGAAGTTCTCCTaGTGCTCCAGGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSSKFS*CSRVLS
Trigger: GGACAAAACCCTGGAGCAGCAGGAGAACTTCGAGGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTCCTCGAAGTTCTCCTaGTGCTCCAGGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRSSKFS*CSRVLS
Trigger: GGACAAAACCCTGGAGCAGCAGGAGAACTTCGAGGA...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCCTACTTTTCTAGTCTaGGGTCTCAGTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCPTFLV*GLSGSA
Trigger: GGCAGAGCCACTGAGACCGCAGACTAGAAAAGTAGG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCCCTGCACGTCATCCTaGTTCCTCTCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVPCTSS*FLSCGP
Trigger: TGGTCCACAAGAGAGGAAGCAGGATGACGTGCAGGG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTCTGACGACTTCCAGGTaGTTCTCCTGGGCTGCCATA +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFLTTSR*FSWAAI
Trigger: TATGGCAGCCCAGGAGAACCACCTGGAAGTCGTCAG...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAACAGAGCCACGGCCAATaGCGTGAAGCCGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKQSHGQ*REAVLC
Trigger: ACAGAGGACGGCTTCACGCCATTGGCCGTGGCTCTG...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTTCCGGGCTGCGATGTaGAGGGCTGGGAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLFRAAM*RAGRRT
Trigger: AGTGCGCCTCCCAGCCCTCCACATCGCAGCCCGGAA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AACCCTGCCCACCCCCAAAATAGCACATTGAGTCAAATCAGTGCCACCTTGCACGCAGAGCTGCTGCCTTaGTGTCGTCTTTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: NPAHPQNSTLSQISATLHAELLP*CRLSGL
Trigger: CAGCCCGGAAAGACGACACCAAGGCAGCAGCTCTGC...GTGCAAGGTGGCACTGATTTGACTCAATGTGCTATTTTGGGGGTGGGCAGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTAATGGTCTCCTTGTGTaGCCATGTGCAGTGGCGACA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTNGLLV*PCAVAT
Trigger: TGTCGCCACTGCACATGGCCACACAAGGAGACCATT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTTTTTGCAGGCGATATaGAGAGGGGTGAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVFLQAI*RGVKPF
Trigger: GAATGGCTTCACCCCTCTCCATATCGCCTGCAAAAA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTCCTCTCACATTGGTaGTGTTTGGGGAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCLLSHW*CLGRLH
Trigger: ATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAG...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTCTCTCCTCTCACATTaGTGGTGTTTGGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRSLLSH*WCLGRL
Trigger: GAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGA...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCTCTCCTCTCACATTaGTGGTGTTTGGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSLLSH*WCLGRL
Trigger: GAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCAAGCTTTCCGTATTTaGCTGCCACGTGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVQAFRI*LPRAEG
Trigger: CCCCTCTGCACGTGGCAGCCAAATACGGAAAGCTTG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGCAAGCTTTCCGTATTTaGCTGCCACGTGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGQAFRI*LPRAEG
Trigger: CCCCTCTGCACGTGGCAGCCAAATACGGAAAGCTTG...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTTCTTTGCGGCTGCGTaGGGTGAGGCTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLFFAAA*GEAPWS
Trigger: GGACCAGGGAGCCTCACCCCACGCAGCCGCAAAGAA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTCCTCACGGTCAAATGTGAGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCACTTTCTTTGCGGCTGCGTaGGGTGAGGCTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LLTVKCEREALKKVKQTTFFAAA*GEAPWS
Trigger: GGACCAGGGAGCCTCACCCCACGCAGCCGCAAAGAA...AGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTTCTTTGCGGCTGCGTaGGGTGAGGCTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIFFAAA*GEAPWS
Trigger: GGACCAGGGAGCCTCACCCCACGCAGCCGCAAAGAA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGCCATCTGGTTCTTCTTaGCCGCGATGTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGPSGSS*PRCAVV
Trigger: CACCACTGCACATCGCGGCCAAGAAGAACCAGATGG...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTACTCCAGCAGGGACGTaGCTATGTCCATCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCTPAGT*LCPSGS
Trigger: AGAACCAGATGGACATAGCCACGTCCCTGCTGGAGT...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTACTCCAGCAGGGACGTaGCTATGTCCATCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCTPAGT*LCPSGS
Trigger: AGAACCAGATGGACATAGCCACGTCCCTGCTGGAGT...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTCCACATGGGCCCCCTaGTTGACAAGGACCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDISTWAP*LTRTSA
Trigger: GGCCGAGGTCCTTGTCAACCAGGGGGCCCATGTGGA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCAAGGCGCCGGGCGATaGCCAGAGCTGTGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFQGAGR*PELCSH
Trigger: ATGGGAACACAGCTCTGGCCATCGCCCGGCGCCTTG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVSPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCGGACGAGGGGCACGGTaGTGCTGCTCAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIGRGAR*CCSESH
Trigger: GTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCC...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCTTGCTGGAAAGGGTTaGGTGGTGTGCAGTACAACC +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCLAGKG*VVCSTT
Trigger: GGTTGTACTGCACACCACCCAACCCTTTCCAGCAAG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCCATCCACGGAACCGTaGTCGAACACATCACTAGAG +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCPSTEP*SNTSLE
Trigger: CTCTAGTGATGTGTTCGACCACGGTTCCGTGGATGG...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp GTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTTCCACCGCCAGACCAAATaGCTTAGTGTCATCTTCCCG +
Preference number: 4 (lower is better)
Translates to: VSLRACAGDSRLPLGVSFHRQTK*LSVIFP
Trigger: CGGGAAGATGACACTAAGCCATTTGGTCTGGCGGTG...GAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CAA 72 bp GGCCGCCCCGGGAAGTCTCGGACAACGACGTGTTCCTaGAGGTACTTTCTTCCTCATCAGACAACTCCGATT +
Preference number: 4 (lower is better)
Translates to: GRPGKSRTTTCS*RYFLPHQTTPI
Trigger: AATCGGAGTTGTCTGATGAGGAAGAAAGTACCTCAAGGAACACGTCGTTGTCCGAGACTTCCCGGGGCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CAA 72 bp GTGGACCCCTCTTCTTCCTGGAGGTTGAGCCTGGCTTaGCCGTCAGCCGTAGTCCTGGTCATCTTTTTCATG +
Preference number: 4 (lower is better)
Translates to: VDPSSSWRLSLA*PSAVVLVIFFM
Trigger: CATGAAAAAGATGACCAGGACTACGGCTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCGTCCACTCCATTTTTaGTGTAGTCAAGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVRPLHF*CSQGPF
Trigger: AAAAGGCCCTTGACTACATCAAAAATGGAGTGGACG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTGTCCAGAAGAAACCTaGCGACTTCCAGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCCPEET*RLPGGS
Trigger: AGAACCACCTGGAAGTCGTCAGGTTTCTTCTGGACA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTGTCATTCCGTGCGGTaGAGTCCACAGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFCHSVR*SPQQPL
Trigger: GAGCGGCTGCTGTGGACTTCACCGCACGGAATGACA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTGACTCGGTTACGGCTTaGATAGATGCACCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFDSVTA*IDAPCF
Trigger: GAAGCACGGTGCATCTATTCAAGCCGTAACCGAGTC...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGATAAAGATGCTCCATaGTCCAGGAGGAACGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRDKDAP*SRRNAA
Trigger: AGCTGCGTTCCTCCTGGATCATGGAGCATCTTTATC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTAGGACCTATCCGAACTaGAGGAGCGGAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLRTYPN*RSGGWQ
Trigger: CTGCCAGCCTCCGCTCCTTCAGTTCGGATAGGTCCT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGEGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTCAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTCCCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDISLLRL*PGGPLF
Trigger: GAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGGA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182795.8
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTCCCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSLLRL*PGGPLF
Trigger: GAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGGA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTGTCAGTGTCCCCTGTaGTGGCATCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVCQCPL*WHLHCV
Trigger: CACACAGTGAAGATGCCATCACAGGGGACACTGACA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTGTCAGTGTCCCCTGTaGTGGCATCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGCQCPL*WHLHCV
Trigger: CACACAGTGAAGATGCCATCACAGGGGACACTGACA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGACATTGGCTTCCCTCTaGAGCAGCTCAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGTLASL*SSSETT
Trigger: AGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGT...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAACAGGAGCAGAGCTGCTaGCTTGGTGTCGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKQEQSC*LGVVFP
Trigger: CGGAAAGACGACACCAAGGCAGCAGCTCTGCTCCTG...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTGTACCCAGAAGTTGTTaGTGCATTGGGGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFVPRSC*CIGGCS
Trigger: GGAGCATCCCCCAATGCAGCAACAACTTCTGGGTAC...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCTGCAGCAGGAGACTTaGGACTTCAAGCTTTCCGTA +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCLQQET*DFKLSV
Trigger: TACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTGCAGCAGGAGACTTaGGACTTCAAGCTTTCCGTA +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCLQQET*DFKLSV
Trigger: TACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAG...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCACGTGCCCTTCCTGTaGCGCAAGATGGACGGACGC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADHVPFL*RKMDGR
Trigger: GCGTCCGTCCATCTTGCGGCACAGGAAGGGCACGTG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTCTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACAGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGSKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCTAAAATGGTCATCTTaGTGGAAAGGGTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPLKWSS*WKGLGG
Trigger: ACCACCCAACCCTTTCCAGCAAGATGACCATTTTAG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVCVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTCTCCCGTTACCATCTaGCTCTTTCTGGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCSPVTI*LFLVGS
Trigger: GCTTCCAACCAGAAAGAGGCAGATGGTAACGGGAGA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCGGGTAGTGATCCTCTaGTCCTCCTCTGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVRVVIL*SSSELE
Trigger: TTCAAGCTCAGAGGAGGAGCAGAGGATCACTACCCG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCAGAGCCACGGCCAATaGCGTGAAGCCGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFQSHGQ*REAVLC
Trigger: ACAGAGGACGGCTTCACGCCATTGGCCGTGGCTCTG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTTCCGGGCTGCGATGTaGAGGGCTGGGAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPFRAAM*RAGRRT
Trigger: AGTGCGCCTCCCAGCCCTCCACATCGCAGCCCGGAA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTAATGGTCTCCTTGTGTaGCCATGTGCAGTGGCGACA +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFNGLLV*PCAVAT
Trigger: TGTCGCCACTGCACATGGCCACACAAGGAGACCATT...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGAATGGTCTCCTTGTGTaGCCATGTGCAGTGGCGACA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVNGLLV*PCAVAT
Trigger: TGTCGCCACTGCACATGGCCACACAAGGAGACCATT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCACATTGGTGGTGTTTaGGGAGGCTCCATGATGCAT +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCHIGGV*GGSMMH
Trigger: ATGCATCATGGAGCCTCCCCAAACACCACCAATGTG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCACATTGGTGGTGTTTaGGGAGGCTCCATGATGCAT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCHIGGV*GGSMMH
Trigger: ATGCATCATGGAGCCTCCCCAAACACCACCAATGTG...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATGGGGTGAGGCTCCCTaGTCCAAGAGCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISWGEAP*SKSRRA
Trigger: GGCCCTTCTGCTCTTGGACCAGGGAGCCTCACCCCA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTGGGGTGAGGCTCCCTaGTCCAAGAGCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLWGEAP*SKSRRA
Trigger: GGCCCTTCTGCTCTTGGACCAGGGAGCCTCACCCCA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTCCACATGGGCCCCCTaGTTGACAAGGACCTCGGCC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSTWAP*LTRTSA
Trigger: GGCCGAGGTCCTTGTCAACCAGGGGGCCCATGTGGA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCAAGGCGCCGGGCGATaGCCAGAGCTGTGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFQGAGR*PELCSH
Trigger: ATGGGAACACAGCTCTGGCCATCGCCCGGCGCCTTG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCCCTCAGGACCGATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATCGGTCCTGAGGG...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGGACGAGGGGCACGGTaGTGCTGCTCAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLGRGAR*CCSESH
Trigger: GTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGGACGAGGGGCACGGTaGTGCTGCTCAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADGRGAR*CCSESH
Trigger: GTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPSLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCTTGCTGGAAAGGGTTaGGTGGTGTGCAGTACAACC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVLAGKG*VVCSTT
Trigger: GGTTGTACTGCACACCACCCAACCCTTTCCAGCAAG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTGGAGGTCCACCTGTTaGATGCTCTATGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCWRSTC*MLYVSL
Trigger: CAGGGAAACATAGAGCATCCAACAGGTGGACCTCCA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAATCCTTCTCTGCGTGCTaGGCTGAGGTCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKSFSAC*AEVSAA
Trigger: TGCTGCTGAGACCTCAGCCCAGCACGCAGAGAAGGA...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR TCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGGTGTGAAGCCATTCTaGGATTGTGCGTTGACATTC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRGVKPF*DCALTF
Trigger: GAATGTCAACGCACAATCTCAGAATGGCTTCACACC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTGGTGTGAAGCCATTCTaGGATTGTGCGTTGACATTC +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCGVKPF*DCALTF
Trigger: GAATGTCAACGCACAATCTCAGAATGGCTTCACACC...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTCCACGTGCAGAGGGGTaGATCCCTTCTTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFPRAEG*IPSLLL
Trigger: TAACAACAAAGAAGGGATTCACCCCTCTGCACGTGG...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTGCGGCTGCGTGGGGTaGGGCTCCCTGGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCCGCVG*GSLVQE
Trigger: CTCTTGGACCAGGGAGCCTCACCCCACGCAGCCGCA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTGGGGAGGCGTTGTTCTaGAGCAAGACATTGATGATA +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCGEALF*SKTLMI
Trigger: TATCATCAATGTCTTGCTTCAGAACAACGCCTCCCC...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCAGGACCTATCCGAACTaGAGGAGCGGAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFRTYPN*RSGGWQ
Trigger: CTGCCAGCCTCCGCTCCTTCAGTTCGGATAGGTCCT...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATTACCAGGCGGCACGTaGTGCGGGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKLPGGT*CGWGPY
Trigger: GTACGGCCCCCACCCGCATCACGTGCCGCCTGGTAA...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTTACCAGGCGGCACGTaGTGCGGGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCLPGGT*CGWGPY
Trigger: GTACGGCCCCCACCCGCATCACGTGCCGCCTGGTAA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATTACCAGGCGGCACGTaGTGCGGGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLLPGGT*CGWGPY
Trigger: GTACGGCCCCCACCCGCATCACGTGCCGCCTGGTAA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCSSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAATTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDILLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLLLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFLLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCATGATGTCATGGACTaGCATGGTCTCCTCAATCCT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTHDVMD*HGLLNP
Trigger: AGGATTGAGGAGACCATGTCAGTCCATGACATCATG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR TCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCACTCCTCCGACTCCTCTaGAACCTCGGGAATCGGGCT +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISLLRLL*NLGNRA
Trigger: AGCCCGATTCCCGAGGTTTCAGAGGAGTCGGAGGAG...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp GTCTTCTATGACAAGCTTGCTGGTTTCTTCCAGAGATTTCTGGTAGGCTGTGAGACCGGGAGGGACTGGTaGTGGGGGTTGCACTCGGAT +
Preference number: 4 (lower is better)
Translates to: VFYDKLAGFFQRFLVGCETGRDW*WGLHSD
Trigger: ATCCGAGTGCAACCCCCATCACCAGTCCCTCCCGGT...CTCACAGCCTACCAGAAATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGTGGTTCTCCTGGGCTaGCATATACAATGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRVVLLG*HIQWCE
Trigger: TTCACACCATTGTATATGGCAGCCCAGGAGAACCAC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTGTGGTTCTCCTGGGCTaGCATATACAATGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCVVLLG*HIQWCE
Trigger: TTCACACCATTGTATATGGCAGCCCAGGAGAACCAC...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp ATGATCATAACCACCCTCCGATTACCCTCTCCAACACGTCCCTCCACCAACTTACAGGAGCAGAGCTGCTaGCTTGGTGTCGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: MIITTLRLPSPTRPSTNLQEQSC*LGVVFP
Trigger: CGGAAAGACGACACCAAGGCAGCAGCTCTGCTCCTG...TAAGTTGGTGGAGGGACGTGTTGGAGAGGGTAATCGGAGGGTGGTTATGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCAGGAGCAGAGCTGCTaGCTTGGTGTCGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFQEQSC*LGVVFP
Trigger: CGGAAAGACGACACCAAGGCAGCAGCTCTGCTCCTG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGCGTTTGTGTCATTCTaGAGGAGCAGAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKAFVSF*RSRAAA
Trigger: GGCAGCAGCTCTGCTCCTGCAGAATGACACAAACGC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCTGCAGCAGGAGACTTaGGACTTCAAGCTTTCCGTA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVLQQET*DFKLSV
Trigger: TACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CAACTCATGGCTTTGGTGTCATCTGAACCTCTCAACCTGTTCCTGAAGTCACATCACGTGCCCTTCCTGTaGCGCAAGATGGACGGACGC +
Preference number: 4 (lower is better)
Translates to: QLMALVSSEPLNLFLKSHHVPFL*RKMDGR
Trigger: GCGTCCGTCCATCTTGCGGCACAGGAAGGGCACGTG...ATGTGACTTCAGGAACAGGTTGAGAGGTTCAGATGACACCAAAGCCATGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACGGTCAAATGTGAGCGGGAGGCTGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: LFLWLLSGLLTVKCEREAVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...AGCCTCCCGCTCACATTTGACCGTGAGGAGCCCAGAAAGAAGCCACAGGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGCGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTCAGTTCTGTGGCTTTTaGCATTGCCGGAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFQFCGF*HCRSQI
Trigger: AATCTGGCTCCGGCAATGGCAAAAGCCACAGAACTG...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGAGACCACTTCCACATaGCCTTCTTTGGAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRETTST*PSLEAR
Trigger: TCTTGCTTCCAAAGAAGGCCATGTGGAAGTGGTCTC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACAGAGCCACGGCCAATaGCGTGAAGCCGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTQSHGQ*REAVLC
Trigger: ACAGAGGACGGCTTCACGCCATTGGCCGTGGCTCTG...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGCAGAGCTGCTGCCTTaGTGTCGTCTTTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLAELLP*CRLSGL
Trigger: CAGCCCGGAAAGACGACACCAAGGCAGCAGCTCTGC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTCCTCACGGTCAAATGTGAGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCACTTCTACCACCTGCTCATaGCCACTTCTCGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: LLTVKCEREALKKVKQTTSTTCS*PLLAPQ
Trigger: CTGTGGGGCGAGAAGTGGCCATGAGCAGGTGGTAGA...AGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTCTACCACCTGCTCATaGCCACTTCTCGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDISTTCS*PLLAPQ
Trigger: CTGTGGGGCGAGAAGTGGCCATGAGCAGGTGGTAGA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTGGACGCAGTTTAAATaGTCTCCTTGTGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCWTQFK*SPCVAM
Trigger: CATGGCCACACAAGGAGACCATTTAAACTGCGTCCA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGCTGGAGGAGGAGTTaGACGCAGTTTAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRCWRRS*TQFKWS
Trigger: AGACCATTTAAACTGCGTCCAACTCCTCCTCCAGCA...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTGCTGGAGGAGGAGTTaGACGCAGTTTAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTCWRRS*TQFKWS
Trigger: AGACCATTTAAACTGCGTCCAACTCCTCCTCCAGCA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTTTTTGCAGGCGATATaGAGAGGGGTGAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTFLQAI*RGVKPF
Trigger: GAATGGCTTCACCCCTCTCCATATCGCCTGCAAAAA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGAAGTTGTTGCTGCATTaGGGGATGCTCCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRKLLLH*GMLLAV
Trigger: TACAGCAAGGAGCATCCCCCAATGCAGCAACAACTT...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTCCCTCAGGACCGATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATCGGTCCTGAGGG...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCCCTCAGGACCGATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATCGGTCCTGAGGG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAATTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTCTGCGGACTCATGCTaGGTTCAGTCAAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGSADSC*VQSSSC
Trigger: ACAGCTACTTGACTGAACCCAGCATGAGTCCGCAGA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGTTCCTTCTCAGAGGTaGAAGGCCTCATGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFVPSQR*KASWRP
Trigger: CGGCCTCCATGAGGCCTTCCACCTCTGAGAAGGAAC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTACGGGGTCCTCTGGCTaGGACTGGGGGATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPTGSSG*DWGISP
Trigger: TGGAGAGATCCCCCAGTCCCAGCCAGAGGACCCCGT...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGCCCTGCCAGCTCTTTaGAAGGGTCTCGCCCGGACT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPALPAL*KGLART
Trigger: AGTCCGGGCGAGACCCTTCCAAAGAGCTGGCAGGGC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp TTATTTCTAGCAGACTTCGTGGTAACTGAAGGCTGGCCGCCCCGGGAAGTCTCGGAGAAAACTCAGCCGTaGTCGCAATGGAACACTCTG +
Preference number: 4 (lower is better)
Translates to: LFLADFVVTEGWPPREVSEKTQP*SQWNTL
Trigger: CAGAGTGTTCCATTGCGACCACGGCTGAGTTTTCTC...CGAGACTTCCCGGGGCGGCCAGCCTTCAGTTACCACGAAGTCTGCTAGAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGGTCTCGCCACAATCTaGAAAAATTGGAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTGLATI*KNWSLS
Trigger: AGAGAGGCTCCAATTTTTCCAGATTGTGGCGAGACC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CAA 72 bp CACCAACTTAACCCTGCCCACCCCCAAAATAGCACATaGAGTCAAATCAGTGCCACCTTGCACAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: HQLNPAHPQNST*SQISATLHRGP
Trigger: CGGACCTCTGTGCAAGGTGGCACTGATTTGACTCAATGTGCTATTTTGGGGGTGGGCAGGGTTAAGTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGGTGTGAAGCCATTCTaGGATTGTGCGTTGACATTC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVGVKPF*DCALTF
Trigger: GAATGTCAACGCACAATCTCAGAATGGCTTCACACC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGACACGACTTGGTCATaGCCTTGTTGCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFDTTWS*PCCRAT
Trigger: CGTGGCTCTGCAACAAGGTCATGACCAAGTCGTGTC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGCAACGTGGCCACATTaGTGTTCCCATAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFATWPH*CSHSGQ
Trigger: CTGCCCACTATGGGAACATCAATGTGGCCACGTTGC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTCCATTCTTGGTTTTTaGAAGGATGGGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVSILGF*KDGGGS
Trigger: AGATCCGCCCCCATCCTTTCAAAAACCAAGAATGGA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGCTTTTGCTTCTACCTaGGCCCCATCTTGGACCAGA +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKAFAST*APSWTR
Trigger: TCTGGTCCAAGATGGGGCTCAGGTAGAAGCAAAAGC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTTTCCCAAGTCGGGCTaGGATGTGGAGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFFPKSG*DVEWSL
Trigger: CAGACTCCACTCCACATCTCAGCCCGACTTGGGAAA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
52% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATTCACTCGGTCTTCTTaGGCAGCCAGGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTFTRSS*AARWSG
Trigger: CCCACTCCACCTGGCTGCTCAAGAAGACCGAGTGAA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTTCACTCGGTCTTCTTaGGCAGCCAGGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLFTRSS*AARWSG
Trigger: CCCACTCCACCTGGCTGCTCAAGAAGACCGAGTGAA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTTCACTCGGTCTTCTTaGGCAGCCAGGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFFTRSS*AARWSG
Trigger: CCCACTCCACCTGGCTGCTCAAGAAGACCGAGTGAA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTTCACTCGGTCTTCTTaGGCAGCCAGGTGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADFTRSS*AARWSG
Trigger: CCCACTCCACCTGGCTGCTCAAGAAGACCGAGTGAA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGCCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGCTCATGGACCCAAAATaGGGGATTTCCACAATGACG +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGLMDPK*GISTMT
Trigger: CGTCATTGTGGAAATCCCTCATTTTGGGTCCATGAG...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCTCATGGACCCAAAATaGGGGATTTCCACAATGACG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVLMDPK*GISTMT
Trigger: CGTCATTGTGGAAATCCCTCATTTTGGGTCCATGAG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLISGRL*GATLVP
Trigger: AGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAAT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFLLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLLLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTACCTTCTTCACCGTCTaGGATATATTCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTTFFTV*DIFPIT
Trigger: AGTGATGGGGAATATATCTCAGACGGTGAAGAAGGT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182884.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGCCATTCTGAGATTGTaGGTTGACATTCGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVAILRL*VDIRSV
Trigger: AACGGAGCGAATGTCAACGCACAATCTCAGAATGGC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCAGGAGCAGAGCTGCTaGCTTGGTGTCGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLQEQSC*LGVVFP
Trigger: CGGAAAGACGACACCAAGGCAGCAGCTCTGCTCCTG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGCGTTTGTGTCATTCTaGAGGAGCAGAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLAFVSF*RSRAAA
Trigger: GGCAGCAGCTCTGCTCCTGCAGAATGACACAAACGC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGACACCATGTCCACGTaGCCTTCCTGTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLDTMST*PSCAAR
Trigger: TCTTGCGGCACAGGAAGGGCACGTGGACATGGTGTC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGAACCTCAATGTCTTTaGTTCTGGCAACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVEPQCL*FWQPPR
Trigger: TCGAGGAGGTTGCCAGAAGCAAAGACATTGAGGTTC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCGCTCACAAGGACTCTaGGGACTCATGCTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFRSQGL*GLMLGS
Trigger: TGAACCCAGCATGAGTCCGCAGAGTCCTTGTGAGCG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCTAAAATGGTCATCTTaGTGGAAAGGGTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTLKWSS*WKGLGG
Trigger: ACCACCCAACCCTTTCCAGCAAGATGACCATTTTAG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCCVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTCVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCCTGCACGTCATCCTaGTTCCTCTCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLPCTSS*FLSCGP
Trigger: TGGTCCACAAGAGAGGAAGCAGGATGACGTGCAGGG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCCGGGCTTTTGACCTaGTTAGGCTCTGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPGLLT*LGSDLV
Trigger: CACCAGGTCAGAGCCTAAGCAGGTCAAAAGCCCGGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGATCCAAAGTCACCCTaGTCAAGATCGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADDPKSP*SRSGLP
Trigger: GGGGAGCCCCGATCTTGAGCAGGGTGACTTTGGATC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGAGACCACTTCCACATaGCCTTCTTTGGAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVETTST*PSLEAR
Trigger: TCTTGCTTCCAAAGAAGGCCATGTGGAAGTGGTCTC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTGGCTGCCATATACAATaGTGTGAAGCCATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCGCHIQ*CEAILR
Trigger: TCTCAGAATGGCTTCACACCATTGTATATGGCAGCC...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGGCTGCCATATACAATaGTGTGAAGCCATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTGCHIQ*CEAILR
Trigger: TCTCAGAATGGCTTCACACCATTGTATATGGCAGCC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCTGACGACTTCCAGGTaGTTCTCCTGGGCTGCCATA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLLTTSR*FSWAAI
Trigger: TATGGCAGCCCAGGAGAACCACCTGGAAGTCGTCAG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TCACGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTTTCCGGGCTGCGATGTaGAGGGCTGGGAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: SRVDLSLKHWASSTTTNTFRAAM*RAGRRT
Trigger: AGTGCGCCTCCCAGCCCTCCACATCGCAGCCCGGAA...AGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTGGTTTTTGAAAGGATaGGGGCGGATCTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVWFLKG*GRICQA
Trigger: TGCTTGACAGATCCGCCCCCATCCTTTCAAAAACCA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTGGACGCAGTTTAAATaGTCTCCTTGTGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGWTQFK*SPCVAM
Trigger: CATGGCCACACAAGGAGACCATTTAAACTGCGTCCA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGCTGGAGGAGGAGTTaGACGCAGTTTAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFCWRRS*TQFKWS
Trigger: AGACCATTTAAACTGCGTCCAACTCCTCCTCCAGCA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTTTTTGCAGGCGATATaGAGAGGGGTGAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFFLQAI*RGVKPF
Trigger: GAATGGCTTCACCCCTCTCCATATCGCCTGCAAAAA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
52% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTTTTTGCAGGCGATATaGAGAGGGGTGAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVFLQAI*RGVKPF
Trigger: GAATGGCTTCACCCCTCTCCATATCGCCTGCAAAAA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGGCAGCAACATGGATTaGGGTAAGGCCCGACTCGGT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADGSNMD*GKARLG
Trigger: ACCGAGTCGGGCCTTACCCCAATCCATGTTGCTGCC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAATCTCTCCTCTCACATTaGTGGTGTTTGGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKSLLSH*WCLGRL
Trigger: GAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGA...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATGTGGAGTGGAGTCTaGTCATCCTTAGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTMWSGV*SSLAFA
Trigger: AGCAAAAGCTAAGGATGACCAGACTCCACTCCACAT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTAGTCGGGCTGAGATGTaGAGTGGAGTCTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSRAEM*SGVWSS
Trigger: GGATGACCAGACTCCACTCCACATCTCAGCCCGACT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAAGTTGTTGCTGCATTaGGGGATGCTCCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGKLLLH*GMLLAV
Trigger: TACAGCAAGGAGCATCCCCCAATGCAGCAACAACTT...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTCCTCACGGTCAAATGTGAGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCACTCAAGCTTTCCGTATTTaGCTGCCACGTGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLTVKCEREALKKVKQTTQAFRI*LPRAEG
Trigger: CCCCTCTGCACGTGGCAGCCAAATACGGAAAGCTTG...AGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCAAGCTTTCCGTATTTaGCTGCCACGTGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFQAFRI*LPRAEG
Trigger: CCCCTCTGCACGTGGCAGCCAAATACGGAAAGCTTG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCAAGGCGCCGGGCGATaGCCAGAGCTGTGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDQGAGR*PELCSH
Trigger: ATGGGAACACAGCTCTGGCCATCGCCCGGCGCCTTG...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTAGTGATTGGCTTGCTGAAAGGGGTCTACATCTCAGAGCCAGTACACAATACACCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LVIGLLKGVYISEPVHNTPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...TGTATTGTGTACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCACTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGSPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCTACCGTGACAATTaGGCTAAATGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVLYRDN*AKCCFV
Trigger: AACAAAGCAACATTTAGCCCAATTGTCACGGTAGAG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCCCATAATCAAATATTaGTCCTTCCAGCAGAGTTAC +
Preference number: 4 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVPIIKY*SFQQSY
Trigger: GTAACTCTGCTGGAAGGACCAATATTTGATTATGGG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAACTTGCTGGAAAGGGTTaGGTGGTGTGCAGTACAACC +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKLAGKG*VVCSTT
Trigger: GGTTGTACTGCACACCACCCAACCCTTTCCAGCAAG...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTGCTCTATGTTTCCCTaGGAAGGCACCAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFCSMFP*EGTSPS
Trigger: TGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CAGTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTGAGAGTCTATCTCCGTaGCATCTGTGTCATGAGAAA +
Preference number: 4 (lower is better)
Translates to: QLVFELALGTLGFHLASRESLSP*HLCHEK
Trigger: TTTCTCATGACACAGATGCCACGGAGATAGACTCTC...ACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp GGCGACACTGGTTCCTCAGTGCGACCACATCCGTGTGTTTTTGGTTTCAGGTTCGGTACTTTCGTCAGTTaGTGTTCTGGCTGGCGTTGT +
Preference number: 4 (lower is better)
Translates to: GDTGSSVRPHPCVFGFRFGTFVS*CSGWRC
Trigger: ACAACGCCAGCCAGAACACCAACTGACGAAAGTACC...GAACCTGAAACCAAAAACACACGGATGTGGTCGCACTGAGGAACCAGTGTCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCTATGTGGAGCGGGGTaGAGCCACTCTTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFLCGAG*SHSLTP
Trigger: TGGAGTCAAAGAGTGGCTTCACCCCGCTCCACATAG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCTATGTGGAGCGGGGTaGAGCCACTCTTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLLCGAG*SHSLTP
Trigger: TGGAGTCAAAGAGTGGCTTCACCCCGCTCCACATAG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTATGTGGAGCGGGGTaGAGCCACTCTTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADLCGAG*SHSLTP
Trigger: TGGAGTCAAAGAGTGGCTTCACCCCGCTCCACATAG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACAGCAACGTGGCCACATTaGTGTTCCCATAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTATWPH*CSHSGQ
Trigger: CTGCCCACTATGGGAACATCAATGTGGCCACGTTGC...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGCAACGTGGCCACATTaGTGTTCCCATAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISATWPH*CSHSGQ
Trigger: CTGCCCACTATGGGAACATCAATGTGGCCACGTTGC...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGACTCGGTTACGGCTTaGATAGATGCACCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFDSVTA*IDAPCF
Trigger: GAAGCACGGTGCATCTATTCAAGCCGTAACCGAGTC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GTGATTGGCTTGCTGAAAGGGGTCTACATCTCAGAGCCAGTACACAATACAGCGGCTTTTGCTTCTACCTaGGCCCCATCTTGGACCAGA +
Preference number: 4 (lower is better)
Translates to: VIGLLKGVYISEPVHNTAAFAST*APSWTR
Trigger: TCTGGTCCAAGATGGGGCTCAGGTAGAAGCAAAAGC...CGCTGTATTGTGTACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTTTCCCAAGTCGGGCTaGGATGTGGAGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADFPKSG*DVEWSL
Trigger: CAGACTCCACTCCACATCTCAGCCCGACTTGGGAAA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATTTCCCAAGTCGGGCTaGGATGTGGAGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISFPKSG*DVEWSL
Trigger: CAGACTCCACTCCACATCTCAGCCCGACTTGGGAAA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTGTTCCCATTCACAGTaGGTTCATTGGGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLCSHSQ*VHWGRR
Trigger: ACGCCTCCCCCAATGAACTCACTGTGAATGGGAACA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAAGGACCTATCCGAACTaGAGGAGCGGAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVRTYPN*RSGGWQ
Trigger: CTGCCAGCCTCCGCTCCTTCAGTTCGGATAGGTCCT...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTTACCAGGCGGCACGTaGTGCGGGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFLPGGT*CGWGPY
Trigger: GTACGGCCCCCACCCGCATCACGTGCCGCCTGGTAA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLEGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIEGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFEGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCCTCAAACAGAGATTTaGCCTTGTCTTCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTPQTEI*PCLLSL
Trigger: AAGTGACAGAAGACAAGGTCAAATCTCTGTTTGAGG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGCCAGTTCTGCTCGCTaGACACGGTTAAGCATAGCC +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISASSAR*TRLSIA
Trigger: GGCTATGCTTAACCGTGTTCAGCGAGCAGAACTGGC...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFISGRL*GATLVP
Trigger: AGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAAT...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLISGRL*GATLVP
Trigger: AGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAAT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPLLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTGTCAGTGTCCCCTGTaGTGGCATCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLCQCPL*WHLHCV
Trigger: CACACAGTGAAGATGCCATCACAGGGGACACTGACA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTCGTTCTGCCAACTCTaGCACAGGTCCTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSFCQL*HRSFNW
Trigger: CCAGTTGAAGGACCTGTGTCAGAGTTGGCAGAACGA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182207.8
ENSMUST00000182692.8
CDS-3UTR TCA 90 bp AACCCTGCCCACCCCCAAAATAGCACATTGAGTCAAATCAGTGCCACCTTGCACCCTATCAAAGCCATCTaGGATCCCTTGAAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: NPAHPQNSTLSQISATLHPIKAI*DPLKVG
Trigger: TCCCACCTTCAAGGGATCTCAGATGGCTTTGATAGG...GTGCAAGGTGGCACTGATTTGACTCAATGTGCTATTTTGGGGGTGGGCAGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR GCA 90 bp CTCCTCACGGTCAAATGTGAGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCACTACATTGGCTTCCCTCTaGAGCAGCTCAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: LLTVKCEREALKKVKQTTTLASL*SSSETT
Trigger: AGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGT...AGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCCAGAAGTTGTTGCTaGATTGGGGGATGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLPRSCC*IGGCSL
Trigger: CAAGGAGCATCCCCCAATGCAGCAACAACTTCTGGG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGTACCCAGAAGTTGTTaGTGCATTGGGGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLVPRSC*CIGGCS
Trigger: GGAGCATCCCCCAATGCAGCAACAACTTCTGGGTAC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCACGTGCCCTTCCTGTaGCGCAAGATGGACGGACGC +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCHVPFL*RKMDGR
Trigger: GCGTCCGTCCATCTTGCGGCACAGGAAGGGCACGTG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp AAGTTCTATAGTTGCTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACGGTCAAATGACACCATGTCCACGTaGCCTTCCTGTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: KFYSCCSCGFFLGSSRSNDTMST*PSCAAR
Trigger: TCTTGCGGCACAGGAAGGGCACGTGGACATGGTGTC...ATTTGACCGTGAGGAGCCCAGAAAGAAGCCACAGGAACAGCAACTATAGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGGGACATTCATTTTGTaGTTCTCCGTGATGGTAGTG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVGTFIL*FSVMVV
Trigger: CACTACCATCACGGAGAAGCACAAAATGAATGTCCC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGCCTACGTAACCTTCTaGTGGCAGGGAGTCATCACC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLAYVTF*WQGVIT
Trigger: GGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGCCTACGTAACCTTCTaGTGGCAGGGAGTCATCACC +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISAYVTF*WQGVIT
Trigger: GGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGC...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDISKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCCTCGAAGTTCTCCTaGTGCTCCAGGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSSKFS*CSRVLS
Trigger: GGACAAAACCCTGGAGCAGCAGGAGAACTTCGAGGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCGCTCACAAGGACTCTaGGGACTCATGCTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADRSQGL*GLMLGS
Trigger: TGAACCCAGCATGAGTCCGCAGAGTCCTTGTGAGCG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGCTAAAATGGTCATCTTaGTGGAAAGGGTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGLKWSS*WKGLGG
Trigger: ACCACCCAACCCTTTCCAGCAAGATGACCATTTTAG...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTACTTTTCTAGTCTaGGGTCTCAGTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLPTFLV*GLSGSA
Trigger: GGCAGAGCCACTGAGACCGCAGACTAGAAAAGTAGG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCTTTTATCTTGGTCATaGTGGGAAAAGTCATCGGGA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTLLSWS*WEKSSG
Trigger: TCCCGATGACTTTTCCCAGCATGACCAAGATAAAAG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTGGCGGCATCAACATTaGCTTCCCTCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLWRHQH*LPSAAA
Trigger: AGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGGCTGCCATATACAATaGTGTGAAGCCATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVGCHIQ*CEAILR
Trigger: TCTCAGAATGGCTTCACACCATTGTATATGGCAGCC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATGCAGAGCTGCTGCCTTaGTGTCGTCTTTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDAELLP*CRLSGL
Trigger: CAGCCCGGAAAGACGACACCAAGGCAGCAGCTCTGC...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTCTACCACCTGCTCATaGCCACTTCTCGCCCCACAG +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMSTTCS*PLLAPQ
Trigger: CTGTGGGGCGAGAAGTGGCCATGAGCAGGTGGTAGA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AAGTTCTATAGTTGCTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACGGTCAAATGGCAGCAACATGGATTaGGGTAAGGCCCGACTCGGT +
Preference number: 4 (lower is better)
Translates to: KFYSCCSCGFFLGSSRSNGSNMD*GKARLG
Trigger: ACCGAGTCGGGCCTTACCCCAATCCATGTTGCTGCC...ATTTGACCGTGAGGAGCCCAGAAAGAAGCCACAGGAACAGCAACTATAGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp GTGATTGGCTTGCTGAAAGGGGTCTACATCTCAGAGCCAGTACACAATACAGCGTCTCTCCTCTCACATTaGTGGTGTTTGGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VIGLLKGVYISEPVHNTASLLSH*WCLGRL
Trigger: GAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGA...CGCTGTATTGTGTACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCGGCCGCGATGTGCAGTaGTGTATAGCCATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIGRDVQ*CIAILC
Trigger: GCAAAGAATGGCTATACACCACTGCACATCGCGGCC...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCATCTGGTTCTTCTTaGCCGCGATGTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPSGSS*PRCAVV
Trigger: CACCACTGCACATCGCGGCCAAGAAGAACCAGATGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGTGGCTATGTCCATCTaGTTCTTCTTGGCCGCGATG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLVAMSI*FFLAAM
Trigger: CATCGCGGCCAAGAAGAACCAGATGGACATAGCCAC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCAGCAGCCAGGTGGAGTaGGGTGAGACCGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSSQVE*GETALI
Trigger: AATAAGAGCGGTCTCACCCCACTCCACCTGGCTGCT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCAAGGCGCCGGGCGATaGCCAGAGCTGTGTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCQGAGR*PELCSH
Trigger: ATGGGAACACAGCTCTGGCCATCGCCCGGCGCCTTG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTACCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGACCACGGCAAAATACTaGGGGAAATCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRTTAKY*GKSFVI
Trigger: TATCACAAAGGATTTCCCCCAGTATTTTGCCGTGGT...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACGGTCAAATGTGAGCGGGAGGCTACCACGGCAAAATACTaGGGGAAATCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: LFLWLLSGLLTVKCEREATTAKY*GKSFVI
Trigger: TATCACAAAGGATTTCCCCCAGTATTTTGCCGTGGT...AGCCTCCCGCTCACATTTGACCGTGAGGAGCCCAGAAAGAAGCCACAGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGSLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAATGGAGGTCCACCTGTTaGATGCTCTATGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKWRSTC*MLYVSL
Trigger: CAGGGAAACATAGAGCATCCAACAGGTGGACCTCCA...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCCTCTTCCTCACTACTaGCTTTCATCTGAAATGCTT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCPLPHY*LSSEML
Trigger: AAGCATTTCAGATGAAAGCCAGTAGTGAGGAAGAGG...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR TCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGGTGTGAAGCCATTCTaGGATTGTGCGTTGACATTC +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKGVKPF*DCALTF
Trigger: GAATGTCAACGCACAATCTCAGAATGGCTTCACACC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCTCCAACACGTCCGACACGACTTGGTCATaGCCTTGTTGCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: YTMGYDHNHPPITLSNTSDTTWS*PCCRAT
Trigger: CGTGGCTCTGCAACAAGGTCATGACCAAGTCGTGTC...GGACGTGTTGGAGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGACACGACTTGGTCATaGCCTTGTTGCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMDTTWS*PCCRAT
Trigger: CGTGGCTCTGCAACAAGGTCATGACCAAGTCGTGTC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGACACGACTTGGTCATaGCCTTGTTGCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPDTTWS*PCCRAT
Trigger: CGTGGCTCTGCAACAAGGTCATGACCAAGTCGTGTC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGCAACGTGGCCACATTaGTGTTCCCATAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPATWPH*CSHSGQ
Trigger: CTGCCCACTATGGGAACATCAATGTGGCCACGTTGC...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGATAAAGATGCTCCATaGTCCAGGAGGAACGCAGCT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFDKDAP*SRRNAA
Trigger: AGCTGCGTTCCTCCTGGATCATGGAGCATCTTTATC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCCACGTGCAGAGGGGTaGATCCCTTCTTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFPRAEG*IPSLLL
Trigger: TAACAACAAAGAAGGGATTCACCCCTCTGCACGTGG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAAGGACCTATCCGAACTaGAGGAGCGGAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKRTYPN*RSGGWQ
Trigger: CTGCCAGCCTCCGCTCCTTCAGTTCGGATAGGTCCT...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAACCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTTTTTACTGTCAAACTaGTGTTCCTTCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTFLLSN*CSFQVS
Trigger: AGAGACCTGGAAGGAACATCAGTTTGACAGTAAAAA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATATCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKISSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACTCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: YLFREPRKFSRFLSLAADSSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAASSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAATCCTCTGGCACGGGCTaGGCCTGGAGACCCACACGG +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLESSGTG*AWRPTR
Trigger: CCGTGTGGGTCTCCAGGCTCAGCCCGTGCCAGAGGA...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CAACTCATGGCTTTGGTGTCATCTGAACCTCTCAACCTGTTCCTGAAGTCACATTTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: QLMALVSSEPLNLFLKSHFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...ATGTGACTTCAGGAACAGGTTGAGAGGTTCAGATGACACCAAAGCCATGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACAGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTEGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCACAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGCCAGTTCTGCTCGCTaGACACGGTTAAGCATAGCC +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMASSAR*TRLSIA
Trigger: GGCTATGCTTAACCGTGTTCAGCGAGCAGAACTGGC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCTGCCAACCTGCAAGTaGAGACATTGCCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFLPTCK*RHCQFC
Trigger: GCAGAACTGGCAATGTCTTCACTTGCAGGTTGGCAG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCTGCCAACCTGCAAGTaGAGACATTGCCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLLPTCK*RHCQFC
Trigger: GCAGAACTGGCAATGTCTTCACTTGCAGGTTGGCAG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPISGRL*GATLVP
Trigger: AGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAAT...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATCCCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKSLLRL*PGGPLF
Trigger: GAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGGA...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182795.8
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTGTCAGTGTCCCCTGTaGTGGCATCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLCQCPL*WHLHCV
Trigger: CACACAGTGAAGATGCCATCACAGGGGACACTGACA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATGTCAGTGTCCCCTGTaGTGGCATCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTCQCPL*WHLHCV
Trigger: CACACAGTGAAGATGCCATCACAGGGGACACTGACA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTGTCAGTGTCCCCTGTaGTGGCATCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADCQCPL*WHLHCV
Trigger: CACACAGTGAAGATGCCATCACAGGGGACACTGACA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATGTCAGTGTCCCCTGTaGTGGCATCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISCQCPL*WHLHCV
Trigger: CACACAGTGAAGATGCCATCACAGGGGACACTGACA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTTGTTTTGGAAATGTTaGCTGCTCACAAAACCCATC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRLFWKC*LLTKPI
Trigger: GATGGGTTTTGTGAGCAGTCAACATTTCCAAAACAA...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCTTTCGGGGAGATATTaGTGTTTCTTATCTGATTCC +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCLSGRY*CFLSDS
Trigger: GGAATCAGATAAGAAACATCAATATCTCCCCGAAAG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAACATTGGCTTCCCTCTaGAGCAGCTCAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISTLASL*SSSETT
Trigger: AGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGT...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCACATTGGCTTCCCTCTaGAGCAGCTCAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLTLASL*SSSETT
Trigger: AGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGCCATTCTGAGATTGTaGGTTGACATTCGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKAILRL*VDIRSV
Trigger: AACGGAGCGAATGTCAACGCACAATCTCAGAATGGC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCTTGTGTGGCCATGTaGAGTGGCGACAATCCATTC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPCVAM*SGDNPF
Trigger: GAATGGATTGTCGCCACTGCACATGGCCACACAAGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCCAGAAGTTGTTGCTaGATTGGGGGATGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPRSCC*IGGCSL
Trigger: CAAGGAGCATCCCCCAATGCAGCAACAACTTCTGGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGTACCCAGAAGTTGTTaGTGCATTGGGGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADVPRSC*CIGGCS
Trigger: GGAGCATCCCCCAATGCAGCAACAACTTCTGGGTAC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTACCCAGAAGTTGTTaGTGCATTGGGGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISVPRSC*CIGGCS
Trigger: GGAGCATCCCCCAATGCAGCAACAACTTCTGGGTAC...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCTTGGCATTAACTTTTaGAGAATGCTGCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTLGINF*RMLQQK
Trigger: TTTCTGCTGCAGCATTCTGCAAAAGTTAATGCCAAG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGCCTACGTAACCTTCTaGTGGCAGGGAGTCATCACC +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPAYVTF*WQGVIT
Trigger: GGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTAATTGGGCTAAATGTTaGTTTGTTCCCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPNWAKC*FVPKDF
Trigger: AAAATCCTTGGGAACAAAGCAACATTTAGCCCAATT...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADSKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTCCTCGAAGTTCTCCTaGTGCTCCAGGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSSKFS*CSRVLS
Trigger: GGACAAAACCCTGGAGCAGCAGGAGAACTTCGAGGA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCGCTCACAAGGACTCTaGGGACTCATGCTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPRSQGL*GLMLGS
Trigger: TGAACCCAGCATGAGTCCGCAGAGTCCTTGTGAGCG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCTACTTTTCTAGTCTaGGGTCTCAGTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPTFLV*GLSGSA
Trigger: GGCAGAGCCACTGAGACCGCAGACTAGAAAAGTAGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACCTACTTTTCTAGTCTaGGGTCTCAGTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTPTFLV*GLSGSA
Trigger: GGCAGAGCCACTGAGACCGCAGACTAGAAAAGTAGG...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCGGGTAGTGATCCTCTaGTCCTCCTCTGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADRVVIL*SSSELE
Trigger: TTCAAGCTCAGAGGAGGAGCAGAGGATCACTACCCG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCGGGTAGTGATCCTCTaGTCCTCCTCTGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLRVVIL*SSSELE
Trigger: TTCAAGCTCAGAGGAGGAGCAGAGGATCACTACCCG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CTGAGAAAAATGACTCTCCTTCCTCTAGTCACCGTCAACTGCCAATTGCTTCTCGAAGGTGGGACACTTTaGCACGCATGTACTCACCCG +
Preference number: 4 (lower is better)
Translates to: LRKMTLLPLVTVNCQLLLEGGTL*HACTHP
Trigger: CGGGTGAGTACATGCGTGGCAAAGTGTCCCACCTTC...GAGAAGCAATTGGCAGTTGACGGTGACTAGAGGAAGGAGAGTCATTTTTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGAGACCACTTCCACATaGCCTTCTTTGGAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKETTST*PSLEAR
Trigger: TCTTGCTTCCAAAGAAGGCCATGTGGAAGTGGTCTC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTGGCGGCATCAACATTaGCTTCCCTCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPWRHQH*LPSAAA
Trigger: AGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AGGGTGCTGCTTAGTGGTAGTTCACATCTTTTAGCATGCATGATGACCAGTACCTGGCGGCATCAACATTaGCTTCCCTCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RVLLSGSSHLLACMMTSTWRHQH*LPSAAA
Trigger: AGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCA...GGTACTGGTCATCATGCATGCTAAAAGATGTGAACTACCACTAAGCAGCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp GAGAGTTCACGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACATGGCGGCATCAACATTaGCTTCCCTCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ESSRVDLSLKHWASSTTTWRHQH*LPSAAA
Trigger: AGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCA...TGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGAACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTGTTTCCTTTCTTTGTaGCGGCATCAACATTGGCTT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVCFLSL*RHQHWL
Trigger: AAGCCAATGTTGATGCCGCCACAAAGAAAGGAAACA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCTCCAACACGTCCCTGACGACTTCCAGGTaGTTCTCCTGGGCTGCCATA +
Preference number: 4 (lower is better)
Translates to: YTMGYDHNHPPITLSNTSLTTSR*FSWAAI
Trigger: TATGGCAGCCCAGGAGAACCACCTGGAAGTCGTCAG...GGACGTGTTGGAGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGCTGACGACTTCCAGGTaGTTCTCCTGGGCTGCCATA +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMLTTSR*FSWAAI
Trigger: TATGGCAGCCCAGGAGAACCACCTGGAAGTCGTCAG...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TACATGTATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCTCCAACCAGAGCCACGGCCAATaGCGTGAAGCCGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: YMYTMGYDHNHPPITLSNQSHGQ*REAVLC
Trigger: ACAGAGGACGGCTTCACGCCATTGGCCGTGGCTCTG...GTTGGAGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATACATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CCA 90 bp TTCACGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACGCAGAGCTGCTGCCTTaGTGTCGTCTTTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: FTCRLVSETLGFIYYDKYAELLP*CRLSGL
Trigger: CAGCCCGGAAAGACGACACCAAGGCAGCAGCTCTGC...GTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTGCAGAGCTGCTGCCTTaGTGTCGTCTTTCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCAELLP*CRLSGL
Trigger: CAGCCCGGAAAGACGACACCAAGGCAGCAGCTCTGC...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTGTGGCCATGTGCAGTaGCGACAATCCATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLCGHVQ*RQSILG
Trigger: ACCAAGAATGGATTGTCGCCACTGCACATGGCCACA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTATCCAAAAGAACCTTaGCAACTTTGTAATGGCCGC +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFYPKEP*QLCNGR
Trigger: GCGGCCATTACAAAGTTGCCAAGGTTCTTTTGGATA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATGGCAGCAACATGGATTaGGGTAAGGCCCGACTCGGT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDGSNMD*GKARLG
Trigger: ACCGAGTCGGGCCTTACCCCAATCCATGTTGCTGCC...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCTCTCACATTGGTaGTGTTTGGGGAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADLLSHW*CLGRLH
Trigger: ATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCCTTCTTTGTTGTTATaGATAAAGATGCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: ERWIPILVQGEVTWDACPPSLLL*IKMLHD
Trigger: ATCATGGAGCATCTTTATCCATAACAACAAAGAAGG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGGCCGCGATGTGCAGTaGTGTATAGCCATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADGRDVQ*CIAILC
Trigger: GCAAAGAATGGCTATACACCACTGCACATCGCGGCC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCCATCTGGTTCTTCTTaGCCGCGATGTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPPSGSS*PRCAVV
Trigger: CACCACTGCACATCGCGGCCAAGAAGAACCAGATGG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGTGGCTATGTCCATCTaGTTCTTCTTGGCCGCGATG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADVAMSI*FFLAAM
Trigger: CATCGCGGCCAAGAAGAACCAGATGGACATAGCCAC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATACTCCAGCAGGGACGTaGCTATGTCCATCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADTPAGT*LCPSGS
Trigger: AGAACCAGATGGACATAGCCACGTCCCTGCTGGAGT...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTCCTCACGGTCAAATGTGAGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCACTCTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LLTVKCEREALKKVKQTTLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...AGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGGGCGGCTTCCTCGCATaGAGCCCCCTCTCGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GEREYRNILIPRTQKILKGGFLA*SPLSRP
Trigger: TGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCC...CTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAACCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAATTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAATCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKSPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACCACGGCAAAATACTaGGGGAAATCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVTTAKY*GKSFVI
Trigger: TATCACAAAGGATTTCCCCCAGTATTTTGCCGTGGT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCCTCAGGACCGATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATCGGTCCTGAGGG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CAACTCATGGCTTTGGTGTCATCTGAACCTCTCAACCTGTTCCTGAAGTCACATTTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QLMALVSSEPLNLFLKSHFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...ATGTGACTTCAGGAACAGGTTGAGAGGTTCAGATGACACCAAAGCCATGAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGCTCTACCGTGACAATTaGGCTAAATGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRLYRDN*AKCCFV
Trigger: AACAAAGCAACATTTAGCCCAATTGTCACGGTAGAG...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCTGCGGACTCATGCTaGGTTCAGTCAAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSADSC*VQSSSC
Trigger: ACAGCTACTTGACTGAACCCAGCATGAGTCCGCAGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTCTGCGGACTCATGCTaGGTTCAGTCAAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSADSC*VQSSSC
Trigger: ACAGCTACTTGACTGAACCCAGCATGAGTCCGCAGA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCCCATAATCAAATATTaGTCCTTCCAGCAGAGTTAC +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTPIIKY*SFQQSY
Trigger: GTAACTCTGCTGGAAGGACCAATATTTGATTATGGG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGCCCATAATCAAATATTaGTCCTTCCAGCAGAGTTAC +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRPIIKY*SFQQSY
Trigger: GTAACTCTGCTGGAAGGACCAATATTTGATTATGGG...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTGGAGGTCCACCTGTTaGATGCTCTATGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFWRSTC*MLYVSL
Trigger: CAGGGAAACATAGAGCATCCAACAGGTGGACCTCCA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRTSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTGTCCAGAAGAAACCTaGCGACTTCCAGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLCPEET*RLPGGS
Trigger: AGAACCACCTGGAAGTCGTCAGGTTTCTTCTGGACA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAATTGTCATTCCGTGCGGTaGAGTCCACAGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RVDLSLKHWASSTTTNTNCHSVR*SPQQPL
Trigger: GAGCGGCTGCTGTGGACTTCACCGCACGGAATGACA...ATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCCATTCTTGGTTTTTaGAAGGATGGGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSILGF*KDGGGS
Trigger: AGATCCGCCCCCATCCTTTCAAAAACCAAGAATGGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCACGTGCAGAGGGGTaGATCCCTTCTTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPRAEG*IPSLLL
Trigger: TAACAACAAAGAAGGGATTCACCCCTCTGCACGTGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCGGGGAGGCGTTGTTCTaGAGCAAGACATTGATGATA +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIGEALF*SKTLMI
Trigger: TATCATCAATGTCTTGCTTCAGAACAACGCCTCCCC...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGGGGAGGCGTTGTTCTaGAGCAAGACATTGATGATA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLGEALF*SKTLMI
Trigger: TATCATCAATGTCTTGCTTCAGAACAACGCCTCCCC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp AGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGATTACCAGGCGGCACGTaGTGCGGGTGGGGGCCGTAC +
Preference number: 4 (lower is better)
Translates to: RFISFHLPVRFQERRRKGLPGGT*CGWGPY
Trigger: GTACGGCCCCCACCCGCATCACGTGCCGCCTGGTAA...TCCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTCATGGACCCAAAATaGGGGATTTCCACAATGACG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFLMDPK*GISTMT
Trigger: CGTCATTGTGGAAATCCCTCATTTTGGGTCCATGAG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCTCATGGACCCAAAATaGGGGATTTCCACAATGACG +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDILMDPK*GISTMT
Trigger: CGTCATTGTGGAAATCCCTCATTTTGGGTCCATGAG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTTTTTACTGTCAAACTaGTGTTCCTTCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFFLLSN*CSFQVS
Trigger: AGAGACCTGGAAGGAACATCAGTTTGACAGTAAAAA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
49% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTTTTTACTGTCAAACTaGTGTTCCTTCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVFLLSN*CSFQVS
Trigger: AGAGACCTGGAAGGAACATCAGTTTGACAGTAAAAA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMEGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPEGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCTACTTCTTCAAGTTaGATGTCCTCAAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSTSSS*MSSNRD
Trigger: ATCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGCTGCCAACCTGCAAGTaGAGACATTGCCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMLPTCK*RHCQFC
Trigger: GCAGAACTGGCAATGTCTTCACTTGCAGGTTGGCAG...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCLLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTGTACTTTGGGAATTTTaGACCATGTGCATTTATCAC +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCVLWEF*TMCIYH
Trigger: GTGATAAATGCACATGGTTCAAAATTCCCAAAGTAC...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGTGGTCGTGGTGATGTaGGTCTCTTCTTTGACACGC +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMVVVVM*VSSLTR
Trigger: GCGTGTCAAAGAAGAGACTCACATCACCACGACCAC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTACTGAAAGGCCTTCATaGTGTCATGGACTGACATGG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLTERPS*CHGLTW
Trigger: CCATGTCAGTCCATGACATCATGAAGGCCTTTCAGT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR TCA 90 bp TTCCCAGGTTCTCCCGTGAGGTATGAGGTAATAGAATCCCGAGCCTGGTCAGAGAACATTTTTCCTTCATaGAATGGGAAGGGGTTAGGC +
Preference number: 4 (lower is better)
Translates to: FPGSPVRYEVIESRAWSENIFPS*NGKGLG
Trigger: GCCTAACCCCTTCCCATTTCATGAAGGAAAAATGTT...CTCTGACCAGGCTCGGGATTCTATTACCTCATACCTCACGGGAGAACCTGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTCGTTCTGCCAACTCTaGCACAGGTCCTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMSFCQL*HRSFNW
Trigger: CCAGTTGAAGGACCTGTGTCAGAGTTGGCAGAACGA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182207.8
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGTGGTTCTCCTGGGCTaGCATATACAATGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLVVLLG*HIQWCE
Trigger: TTCACACCATTGTATATGGCAGCCCAGGAGAACCAC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACAGGAGCAGAGCTGCTaGCTTGGTGTCGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLQEQSC*LGVVFP
Trigger: CGGAAAGACGACACCAAGGCAGCAGCTCTGCTCCTG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TTCACGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACCAGGAGCAGAGCTGCTaGCTTGGTGTCGTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: FTCRLVSETLGFIYYDKYQEQSC*LGVVFP
Trigger: CGGAAAGACGACACCAAGGCAGCAGCTCTGCTCCTG...GTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGCGTTTGTGTCATTCTaGAGGAGCAGAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVAFVSF*RSRAAA
Trigger: GGCAGCAGCTCTGCTCCTGCAGAATGACACAAACGC...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGTTCCATTACTCGGATaGGGTTCTTTTTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFVPLLG*GSFCRR
Trigger: TCGCCTGCAAAAAGAACCGCATCCGAGTAATGGAAC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTGCAGCAGGAGACTTaGGACTTCAAGCTTTCCGTA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADLQQET*DFKLSV
Trigger: TACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGACACCATGTCCACGTaGCCTTCCTGTGCCGCAAGA +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLDTMST*PSCAAR
Trigger: TCTTGCGGCACAGGAAGGGCACGTGGACATGGTGTC...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGCCTACGTAACCTTCTaGTGGCAGGGAGTCATCACC +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVAYVTF*WQGVIT
Trigger: GGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGC...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGCTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMSKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTTCCTCGAAGTTCTCCTaGTGCTCCAGGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPSSKFS*CSRVLS
Trigger: GGACAAAACCCTGGAGCAGCAGGAGAACTTCGAGGA...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGCTCACAAGGACTCTaGGGACTCATGCTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDRSQGL*GLMLGS
Trigger: TGAACCCAGCATGAGTCCGCAGAGTCCTTGTGAGCG...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTCTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAATGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKCVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAACACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTCCTCACGGTCAAATGTGAGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCACTTGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: LLTVKCEREALKKVKQTTWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...AGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCGGGTAGTGATCCTCTaGTCCTCCTCTGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPRVVIL*SSSELE
Trigger: TTCAAGCTCAGAGGAGGAGCAGAGGATCACTACCCG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCCCTGCACGTCATCCTaGTTCCTCTCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDPCTSS*FLSCGP
Trigger: TGGTCCACAAGAGAGGAAGCAGGATGACGTGCAGGG...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTCTTTGGAAGCAAGATaGAGTGCATTCAATCCATTC +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGSLEAR*SAFNPF
Trigger: GAATGGATTGAATGCACTCCATCTTGCTTCCAAAGA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ATGATCATAACCACCCTCCGATTACCCTCTCCAACACGTCCCTCCACCAACTTAGAGACCACTTCCACATaGCCTTCTTTGGAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: MIITTLRLPSPTRPSTNLETTST*PSLEAR
Trigger: TCTTGCTTCCAAAGAAGGCCATGTGGAAGTGGTCTC...TAAGTTGGTGGAGGGACGTGTTGGAGAGGGTAATCGGAGGGTGGTTATGATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTGGCGGCATCAACATTaGCTTCCCTCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDWRHQH*LPSAAA
Trigger: AGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGGCTGCCATATACAATaGTGTGAAGCCATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKGCHIQ*CEAILR
Trigger: TCTCAGAATGGCTTCACACCATTGTATATGGCAGCC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTCCAGGTGGTTCTCCTaGGCTGCCATATACAATGGT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSRWFS*AAIYNG
Trigger: ACCATTGTATATGGCAGCCCAGGAGAACCACCTGGA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTGAAACACTGGGCTTCATCTACTACGACAAATACTAATCCATACACACATCCACAGAGCCACGGCCAATaGCGTGAAGCCGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LKHWASSTTTNTNPYTHPQSHGQ*REAVLC
Trigger: ACAGAGGACGGCTTCACGCCATTGGCCGTGGCTCTG...TGGATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTTCCGGGCTGCGATGTaGAGGGCTGGGAGGCGCACT +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAFRAAM*RAGRRT
Trigger: AGTGCGCCTCCCAGCCCTCCACATCGCAGCCCGGAA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTCCTCACGGTCAAATGTGAGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCACTTGGTTTTTGAAAGGATaGGGGCGGATCTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: LLTVKCEREALKKVKQTTWFLKG*GRICQA
Trigger: TGCTTGACAGATCCGCCCCCATCCTTTCAAAAACCA...AGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCAATGGTCTCCTTGTGTaGCCATGTGCAGTGGCGACA +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPNGLLV*PCAVAT
Trigger: TGTCGCCACTGCACATGGCCACACAAGGAGACCATT...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCACATTGGTGGTGTTTaGGGAGGCTCCATGATGCAT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFHIGGV*GGSMMH
Trigger: ATGCATCATGGAGCCTCCCCAAACACCACCAATGTG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCACATTGGTGGTGTTTaGGGAGGCTCCATGATGCAT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLHIGGV*GGSMMH
Trigger: ATGCATCATGGAGCCTCCCCAAACACCACCAATGTG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTAAGTTGTTGCTGCATTaGGGGATGCTCCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLKLLLH*GMLLAV
Trigger: TACAGCAAGGAGCATCCCCCAATGCAGCAACAACTT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTACCATCTGGTTCTTCTTaGCCGCGATGTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVPSGSS*PRCAVV
Trigger: CACCACTGCACATCGCGGCCAAGAAGAACCAGATGG...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AAGTTCTATAGTTGCTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACGGTCAAATGTGGCTATGTCCATCTaGTTCTTCTTGGCCGCGATG +
Preference number: 4 (lower is better)
Translates to: KFYSCCSCGFFLGSSRSNVAMSI*FFLAAM
Trigger: CATCGCGGCCAAGAAGAACCAGATGGACATAGCCAC...ATTTGACCGTGAGGAGCCCAGAAAGAAGCCACAGGAACAGCAACTATAGAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATAGCAGCCAGGTGGAGTaGGGTGAGACCGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDSSQVE*GETALI
Trigger: AATAAGAGCGGTCTCACCCCACTCCACCTGGCTGCT...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTCCACATGGGCCCCCTaGTTGACAAGGACCTCGGCC +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFSTWAP*LTRTSA
Trigger: GGCCGAGGTCCTTGTCAACCAGGGGGCCCATGTGGA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDISGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
49% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCCCTCAGGACCGATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATCGGTCCTGAGGG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCCTCAGGACCGATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATCGGTCCTGAGGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCCCTCAGGACCGATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATCGGTCCTGAGGG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTCTCTACCGTGACAATTaGGCTAAATGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFLYRDN*AKCCFV
Trigger: AACAAAGCAACATTTAGCCCAATTGTCACGGTAGAG...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATCTGCGGACTCATGCTaGGTTCAGTCAAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTSADSC*VQSSSC
Trigger: ACAGCTACTTGACTGAACCCAGCATGAGTCCGCAGA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTCTGCGGACTCATGCTaGGTTCAGTCAAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFSADSC*VQSSSC
Trigger: ACAGCTACTTGACTGAACCCAGCATGAGTCCGCAGA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCCCATAATCAAATATTaGTCCTTCCAGCAGAGTTAC +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVPIIKY*SFQQSY
Trigger: GTAACTCTGCTGGAAGGACCAATATTTGATTATGGG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCTTGCTGGAAAGGGTTaGGTGGTGTGCAGTACAACC +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPLAGKG*VVCSTT
Trigger: GGTTGTACTGCACACCACCCAACCCTTTCCAGCAAG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCTTGCTGGAAAGGGTTaGGTGGTGTGCAGTACAACC +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPLAGKG*VVCSTT
Trigger: GGTTGTACTGCACACCACCCAACCCTTTCCAGCAAG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTGCTCTATGTTTCCCTaGGAAGGCACCAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDCSMFP*EGTSPS
Trigger: TGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFTSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATCTCAGCAGCAGACTTaGCAACATCTGGAGACATGG +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTSQQQT*QHLETW
Trigger: CCATGTCTCCAGATGTTGCCAAGTCTGCTGCTGAGA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp TTCTGGTGCCTGAAATATTCCCATAATCAAATATTGGTCCTTCCAGCAGAGTTAACTGGGCCCCTGACTTaGGATCGGCCTTCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FWCLKYSHNQILVLPAELTGPLT*DRPSLG
Trigger: CCCCAGAGAAGGCCGATCCCAAGTCAGGGGCCCAGT...TAACTCTGCTGGAAGGACCAATATTTGATTATGGGAATATTTCAGGCACCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTTGTCCCCTCGGTTATTaGGCCAAGGGTCAAAGTCGA +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPCPLGY*AKGQSR
Trigger: TCGACTTTGACCCTTGGCCCAATAACCGAGGGGACA...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CAA 72 bp GAAGCCAAGGGTCGCAATGAGAGTTCACGTGTAGACTaGTCTCTGAAACACTGGGCTTCATCTACTACGACA +
Preference number: 4 (lower is better)
Translates to: EAKGRNESSRVD*SLKHWASSTTT
Trigger: TGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGAACTCTCATTGCGACCCTTGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCGTCCACTCCATTTTTaGTGTAGTCAAGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFRPLHF*CSQGPF
Trigger: AAAAGGCCCTTGACTACATCAAAAATGGAGTGGACG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CACAAATCCCTGAGAAAAATGACTCTCCTTCCTCTAGTCACCGTCAACTGCCAATGTCCAGAAGAAACCTaGCGACTTCCAGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: HKSLRKMTLLPLVTVNCQCPEET*RLPGGS
Trigger: AGAACCACCTGGAAGTCGTCAGGTTTCTTCTGGACA...TTGGCAGTTGACGGTGACTAGAGGAAGGAGAGTCATTTTTCTCAGGGATTTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGACACGACTTGGTCATaGCCTTGTTGCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLDTTWS*PCCRAT
Trigger: CGTGGCTCTGCAACAAGGTCATGACCAAGTCGTGTC...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TTCACGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACGACACGACTTGGTCATaGCCTTGTTGCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: FTCRLVSETLGFIYYDKYDTTWS*PCCRAT
Trigger: CGTGGCTCTGCAACAAGGTCATGACCAAGTCGTGTC...GTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR TCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTGACACGACTTGGTCATaGCCTTGTTGCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCDTTWS*PCCRAT
Trigger: CGTGGCTCTGCAACAAGGTCATGACCAAGTCGTGTC...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACTATGTGGAGCGGGGTaGAGCCACTCTTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLLCGAG*SHSLTP
Trigger: TGGAGTCAAAGAGTGGCTTCACCCCGCTCCACATAG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TCACGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTGCAACGTGGCCACATTaGTGTTCCCATAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SRVDLSLKHWASSTTTNTATWPH*CSHSGQ
Trigger: CTGCCCACTATGGGAACATCAATGTGGCCACGTTGC...AGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGCAACGTGGCCACATTaGTGTTCCCATAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLATWPH*CSHSGQ
Trigger: CTGCCCACTATGGGAACATCAATGTGGCCACGTTGC...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATTTCCCAAGTCGGGCTaGGATGTGGAGTGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLFPKSG*DVEWSL
Trigger: CAGACTCCACTCCACATCTCAGCCCGACTTGGGAAA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGATAAAGATGCTCCATaGTCCAGGAGGAACGCAGCT +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPDKDAP*SRRNAA
Trigger: AGCTGCGTTCCTCCTGGATCATGGAGCATCTTTATC...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGGGGAGGCGTTGTTCTaGAGCAAGACATTGATGATA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADGEALF*SKTLMI
Trigger: TATCATCAATGTCTTGCTTCAGAACAACGCCTCCCC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCTCATGGACCCAAAATaGGGGATTTCCACAATGACG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLLMDPK*GISTMT
Trigger: CGTCATTGTGGAAATCCCTCATTTTGGGTCCATGAG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDEGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTACAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTCTACTTCTTCAAGTTaGATGTCCTCAAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFSTSSS*MSSNRD
Trigger: ATCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAGCCAGTTCTGCTCGCTaGACACGGTTAAGCATAGCC +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKASSAR*TRLSIA
Trigger: GGCTATGCTTAACCGTGTTCAGCGAGCAGAACTGGC...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTCCCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFSLLRL*PGGPLF
Trigger: GAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGGA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182795.8
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCAATGGAACACTCTGTaGCAGACTGGTCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFQWNTL*QTGHCF
Trigger: GAAACAATGACCAGTCTGTCACAGAGTGTTCCATTG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGCCATTCTGAGATTGTaGGTTGACATTCGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADAILRL*VDIRSV
Trigger: AACGGAGCGAATGTCAACGCACAATCTCAGAATGGC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGTGGTTCTCCTGGGCTaGCATATACAATGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADVVLLG*HIQWCE
Trigger: TTCACACCATTGTATATGGCAGCCCAGGAGAACCAC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCGTTCCATTACTCGGATaGGGTTCTTTTTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFVPLLG*GSFCRR
Trigger: TCGCCTGCAAAAAGAACCGCATCCGAGTAATGGAAC...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGTTCCATTACTCGGATaGGGTTCTTTTTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLVPLLG*GSFCRR
Trigger: TCGCCTGCAAAAAGAACCGCATCCGAGTAATGGAAC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTACTTTCCGTATTTGGCTaGCACGTGCAGAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVLSVFG*HVQRGE
Trigger: TTCACCCCTCTGCACGTGGCAGCCAAATACGGAAAG...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTCACGTGCCCTTCCTGTaGCGCAAGATGGACGGACGC +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGHVPFL*RKMDGR
Trigger: GCGTCCGTCCATCTTGCGGCACAGGAAGGGCACGTG...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGGGACATTCATTTTGTaGTTCTCCGTGATGGTAGTG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFGTFIL*FSVMVV
Trigger: CACTACCATCACGGAGAAGCACAAAATGAATGTCCC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILGARWC*SESHPQ
Trigger: CTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCC...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTAATTGGGCTAAATGTTaGTTTGTTCCCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTNWAKC*FVPKDF
Trigger: AAAATCCTTGGGAACAAAGCAACATTTAGCCCAATT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATCCTCGAAGTTCTCCTaGTGCTCCAGGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVSSKFS*CSRVLS
Trigger: GGACAAAACCCTGGAGCAGCAGGAGAACTTCGAGGA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGAACCTCAATGTCTTTaGTTCTGGCAACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLEPQCL*FWQPPR
Trigger: TCGAGGAGGTTGCCAGAAGCAAAGACATTGAGGTTC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCGAACCTCAATGTCTTTaGTTCTGGCAACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFEPQCL*FWQPPR
Trigger: TCGAGGAGGTTGCCAGAAGCAAAGACATTGAGGTTC...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGAACCTCAATGTCTTTaGTTCTGGCAACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADEPQCL*FWQPPR
Trigger: TCGAGGAGGTTGCCAGAAGCAAAGACATTGAGGTTC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTAGTGATTGGCTTGCTGAAAGGGGTCTACATCTCAGAGCCAGTACACAATACAGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: LVIGLLKGVYISEPVHNTALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...TGTATTGTGTACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCACTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCGCTCACAAGGACTCTaGGGACTCATGCTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCRSQGL*GLMLGS
Trigger: TGAACCCAGCATGAGTCCGCAGAGTCCTTGTGAGCG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp TTAAGTCTAGCTGCTGACGTAAGTGTACTTCCCACCTGGACTGACGTCACTGTCCTAAAATGGTCATCTTaGTGGAAAGGGTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LSLAADVSVLPTWTDVTVLKWSS*WKGLGG
Trigger: ACCACCCAACCCTTTCCAGCAAGATGACCATTTTAG...GACAGTGACGTCAGTCCAGGTGGGAAGTACACTTACGTCAGCAGCTAGACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCTAAAATGGTCATCTTaGTGGAAAGGGTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDILKWSS*WKGLGG
Trigger: ACCACCCAACCCTTTCCAGCAAGATGACCATTTTAG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCAGAATCGTCCATTTTaGTGTCTTCTAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVQNRPF*CLLKKC
Trigger: ACACTTCTTTAGAAGACAGCAAAATGGACGATTCTG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGCAGAATCGTCCATTTTaGTGTCTTCTAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGQNRPF*CLLKKC
Trigger: ACACTTCTTTAGAAGACAGCAAAATGGACGATTCTG...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTAAGTCTAGCTGCTGACGTAAGTGTACTTCCCACCTGGACTGACGTCACTGTCTGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSLAADVSVLPTWTDVTVCVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...GACAGTGACGTCAGTCCAGGTGGGAAGTACACTTACGTCAGCAGCTAGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDICVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFCVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTAAGTCTAGCTGCTGACGTAAGTGTACTTCCCACCTGGACTGACGTCACTGTCCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: LSLAADVSVLPTWTDVTVHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...GACAGTGACGTCAGTCCAGGTGGGAAGTACACTTACGTCAGCAGCTAGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GTCTTCTATGACAAGCTTGCTGGTTTCTTCCAGAGATTTCTGGTAGGCTGTGAGAGCACATGGGAGAGTTaGTCTTTCTGGGCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: VFYDKLAGFFQRFLVGCESTWES*SFWALV
Trigger: CACTAAGGCCCAGAAAGAGCAACTCTCCCATGTGCT...CTCACAGCCTACCAGAAATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp CCGTGTGTTTTTGGTTTCAGGTTCTCCTTGATGCTCTGTTTCCCTATATCGTTTTATCATCTTCTGGACTaGCCTGGGGAGACGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PCVFGFRFSLMLCFPISFYHLLD*PGETEA
Trigger: AGCCTCCGTCTCCCCAGGGCAGTCCAGAAGATGATA...AAACGATATAGGGAAACAGAGCATCAAGGAGAACCTGAAACCAAAAACACACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCACTTGCTCATGTCAATTaGACCACTGCGAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISLAHVN*TTASHL
Trigger: GAGATGACTCGCAGTGGTGCAATTGACATGAGCAAG...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAACCCTGCACGTCATCCTaGTTCCTCTCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKPCTSS*FLSCGP
Trigger: TGGTCCACAAGAGAGGAAGCAGGATGACGTGCAGGG...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CATACATGTATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCTCCATGGCGGCATCAACATTaGCTTCCCTCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HTCIQWVMIITTLRLPSPWRHQH*LPSAAA
Trigger: AGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCA...TGGAGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATACATGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CCA 90 bp AACCCTGCCCACCCCCAAAATAGCACATTGAGTCAAATCAGTGCCACCTTGCACTGTTTCCTTTCTTTGTaGCGGCATCAACATTGGCTT +
Preference number: 4 (lower is better)
Translates to: NPAHPQNSTLSQISATLHCFLSL*RHQHWL
Trigger: AAGCCAATGTTGATGCCGCCACAAAGAAAGGAAACA...GTGCAAGGTGGCACTGATTTGACTCAATGTGCTATTTTGGGGGTGGGCAGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGCGACAATCCATTCTTaGTTTTTGAAAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLATIHS*FLKGWG
Trigger: CCCCCATCCTTTCAAAAACCAAGAATGGATTGTCGC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGCGACAATCCATTCTTaGTTTTTGAAAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFATIHS*FLKGWG
Trigger: CCCCCATCCTTTCAAAAACCAAGAATGGATTGTCGC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATGGACGCAGTTTAAATaGTCTCCTTGTGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISWTQFK*SPCVAM
Trigger: CATGGCCACACAAGGAGACCATTTAAACTGCGTCCA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTGGACGCAGTTTAAATaGTCTCCTTGTGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADWTQFK*SPCVAM
Trigger: CATGGCCACACAAGGAGACCATTTAAACTGCGTCCA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTGCTGGAGGAGGAGTTaGACGCAGTTTAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADCWRRS*TQFKWS
Trigger: AGACCATTTAAACTGCGTCCAACTCCTCCTCCAGCA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTACTCCTCTCACATTGGTaGTGTTTGGGGAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVLLSHW*CLGRLH
Trigger: ATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAG...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCAAGTTGTTGCTGCATTaGGGGATGCTCCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFKLLLH*GMLLAV
Trigger: TACAGCAAGGAGCATCCCCCAATGCAGCAACAACTT...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATGGCCGCGATGTGCAGTaGTGTATAGCCATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDGRDVQ*CIAILC
Trigger: GCAAAGAATGGCTATACACCACTGCACATCGCGGCC...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGTGGCTATGTCCATCTaGTTCTTCTTGGCCGCGATG +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVVAMSI*FFLAAM
Trigger: CATCGCGGCCAAGAAGAACCAGATGGACATAGCCAC...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISSPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADSPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAACCACGGCAAAATACTaGGGGAAATCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKTTAKY*GKSFVI
Trigger: TATCACAAAGGATTTCCCCCAGTATTTTGCCGTGGT...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGGACGAGGGGCACGGTaGTGCTGCTCAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAGRGAR*CCSESH
Trigger: GTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTGGACGAGGGGCACGGTaGTGCTGCTCAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGGRGAR*CCSESH
Trigger: GTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCC...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTGATCTTGATGGAAAATaGCAGTCTGTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCDLDGK*QSVFFE
Trigger: TTCAAAGAAAACAGACTGCCATTTTCCATCAAGATC...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGATCTTGATGGAAAATaGCAGTCTGTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTDLDGK*QSVFFE
Trigger: TTCAAAGAAAACAGACTGCCATTTTCCATCAAGATC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTGATCTTGATGGAAAATaGCAGTCTGTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCDLDGK*QSVFFE
Trigger: TTCAAAGAAAACAGACTGCCATTTTCCATCAAGATC...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTTCTGCGGACTCATGCTaGGTTCAGTCAAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPSADSC*VQSSSC
Trigger: ACAGCTACTTGACTGAACCCAGCATGAGTCCGCAGA...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCTTGCTGGAAAGGGTTaGGTGGTGTGCAGTACAACC +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDLAGKG*VVCSTT
Trigger: GGTTGTACTGCACACCACCCAACCCTTTCCAGCAAG...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTGCTCTATGTTTCCCTaGGAAGGCACCAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCCSMFP*EGTSPS
Trigger: TGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATGCTCTATGTTTCCCTaGGAAGGCACCAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLCSMFP*EGTSPS
Trigger: TGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTTGGAGGTCCACCTGTTaGATGCTCTATGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPWRSTC*MLYVSL
Trigger: CAGGGAAACATAGAGCATCCAACAGGTGGACCTCCA...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CAACTCATGGCTTTGGTGTCATCTGAACCTCTCAACCTGTTCCTGAAGTCACATATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: QLMALVSSEPLNLFLKSHIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...ATGTGACTTCAGGAACAGGTTGAGAGGTTCAGATGACACCAAAGCCATGAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTGTCATGGACTGACATaGTCTCCTCAATCCTTTCGG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLCHGLT*SPQSFR
Trigger: CCGAAAGGATTGAGGAGACCATGTCAGTCCATGACA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACAGCCTTCATGATGTCATaGACTGACATGGTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTAFMMS*TDMVSS
Trigger: TGAGGAGACCATGTCAGTCCATGACATCATGAAGGC...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCAGTTTGGGTTTCATTTaGCTGTCCTTCTCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSLGFI*LSFSAC
Trigger: GCACGCAGAGAAGGACAGCCAAATGAAACCCAAACT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp GTCTTCTATGACAAGCTTGCTGGTTTCTTCCAGAGATTTCTGGTAGGCTGTGAGAGTCGGGAGATTTGGTaGGAGAGGTCTCGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: VFYDKLAGFFQRFLVGCESREIW*ERSRFH
Trigger: ATGAAACCGAGACCTCTCCCACCAAATCTCCCGACT...CTCACAGCCTACCAGAAATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGTCTATGGTCTGACTTaGGAGTTTAGAGTCGCTCTC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADVYGLT*EFRVAL
Trigger: GAGAGCGACTCTAAACTCCCAAGTCAGACCATAGAC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTTAGGCTCACTAGTTaGGGTACTTTCGTCAGTTGG +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISVRLTS*GTFVSW
Trigger: CCAACTGACGAAAGTACCCCAACTAGTGAGCCTAAC...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp ATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCTCCAACACGTCCCCGTCCACTCCATTTTTaGTGTAGTCAAGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: IQWVMIITTLRLPSPTRPRPLHF*CSQGPF
Trigger: AAAAGGCCCTTGACTACATCAAAAATGGAGTGGACG...GGGACGTGTTGGAGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGGTGTGAAGCCATTCTaGGATTGTGCGTTGACATTC +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPGVKPF*DCALTF
Trigger: GAATGTCAACGCACAATCTCAGAATGGCTTCACACC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp AGTTCCCCGCTGTGGGAATGGCAATCACTTACATGTATTTTCTCTATAAGAGTTCTATGTGGAGCGGGGTaGAGCCACTCTTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: SSPLWEWQSLTCIFSIRVLCGAG*SHSLTP
Trigger: TGGAGTCAAAGAGTGGCTTCACCCCGCTCCACATAG...AACTCTTATAGAGAAAATACATGTAAGTGATTGCCATTCCCACAGCGGGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTCCATTCTTGGTTTTTaGAAGGATGGGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPSILGF*KDGGGS
Trigger: AGATCCGCCCCCATCCTTTCAAAAACCAAGAATGGA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATGATAAAGATGCTCCATaGTCCAGGAGGAACGCAGCT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDDKDAP*SRRNAA
Trigger: AGCTGCGTTCCTCCTGGATCATGGAGCATCTTTATC...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCTTATTGCTCAGGTTaGCATTCGCGTTTCTACTCA +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSYCSG*HSRFYS
Trigger: TGAGTAGAAACGCGAATGTCAACCTGAGCAATAAGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATGTTCCCATTCACAGTaGGTTCATTGGGGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKCSHSQ*VHWGRR
Trigger: ACGCCTCCCCCAATGAACTCACTGTGAATGGGAACA...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACAGGACCTATCCGAACTaGAGGAGCGGAGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: YLFREPRKFSRFLSLAADRTYPN*RSGGWQ
Trigger: CTGCCAGCCTCCGCTCCTTCAGTTCGGATAGGTCCT...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCTCATGGACCCAAAATaGGGGATTTCCACAATGACG +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPLMDPK*GISTMT
Trigger: CGTCATTGTGGAAATCCCTCATTTTGGGTCCATGAG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGCTCATGGACCCAAAATaGGGGATTTCCACAATGACG +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMLMDPK*GISTMT
Trigger: CGTCATTGTGGAAATCCCTCATTTTGGGTCCATGAG...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCEGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKEGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCCTCAAACAGAGATTTaGCCTTGTCTTCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFPQTEI*PCLLSL
Trigger: AAGTGACAGAAGACAAGGTCAAATCTCTGTTTGAGG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTCAAACAGAGATTTaGCCTTGTCTTCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLPQTEI*PCLLSL
Trigger: AAGTGACAGAAGACAAGGTCAAATCTCTGTTTGAGG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCCTCAAACAGAGATTTaGCCTTGTCTTCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIPQTEI*PCLLSL
Trigger: AAGTGACAGAAGACAAGGTCAAATCTCTGTTTGAGG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACTGCCAACCTGCAAGTaGAGACATTGCCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLLPTCK*RHCQFC
Trigger: GCAGAACTGGCAATGTCTTCACTTGCAGGTTGGCAG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTAAGTCTAGCTGCTGACGTAAGTGTACTTCCCACCTGGACTGACGTCACTGTCGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 4 (lower is better)
Translates to: LSLAADVSVLPTWTDVTVVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...GACAGTGACGTCAGTCCAGGTGGGAAGTACACTTACGTCAGCAGCTAGACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTCCCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGSLLRL*PGGPLF
Trigger: GAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGGA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCGTCTGCCTTCCAGGGTaGAAAACTGGGCCCCTGACT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFVCLPG*KTGPLT
Trigger: AGTCAGGGGCCCAGTTTTTCACCCTGGAAGGCAGAC...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTGACCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGDLLRL*PGGPLF
Trigger: GAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGTC...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp CCGCTGTGGGAATGGCAATCACTTACATGTATTTTCTCTATAAGAGTTTATTATTACTCACCCGTGCGGTaGAGTCCACAGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: PLWEWQSLTCIFSIRVYYYSPVR*SPQQPL
Trigger: GAGCGGCTGCTGTGGACTTCACCGCACGGGTGAGTA...ATAATAAACTCTTATAGAGAAAATACATGTAAGTGATTGCCATTCCCACAGCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR GCA 90 bp AGGGTGCTGCTTAGTGGTAGTTCACATCTTTTAGCATGCATGATGACCAGTACCGTGGTTCTCCTGGGCTaGCATATACAATGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: RVLLSGSSHLLACMMTSTVVLLG*HIQWCE
Trigger: TTCACACCATTGTATATGGCAGCCCAGGAGAACCAC...GGTACTGGTCATCATGCATGCTAAAAGATGTGAACTACCACTAAGCAGCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp GACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAATCCATACGCGTTTGTGTCATTCTaGAGGAGCAGAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DLSLKHWASSTTTNTNPYAFVSF*RSRAAA
Trigger: GGCAGCAGCTCTGCTCCTGCAGAATGACACAAACGC...GTATGGATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAACCTTGTGTGGCCATGTaGAGTGGCGACAATCCATTC +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKPCVAM*SGDNPF
Trigger: GAATGGATTGTCGCCACTGCACATGGCCACACAAGG...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGTTCCATTACTCGGATaGGGTTCTTTTTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPVPLLG*GSFCRR
Trigger: TCGCCTGCAAAAAGAACCGCATCCGAGTAATGGAAC...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAACCCAGAAGTTGTTGCTaGATTGGGGGATGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKPRSCC*IGGCSL
Trigger: CAAGGAGCATCCCCCAATGCAGCAACAACTTCTGGG...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGGGACATTCATTTTGTaGTTCTCCGTGATGGTAGTG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLGTFIL*FSVMVV
Trigger: CACTACCATCACGGAGAAGCACAAAATGAATGTCCC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAACTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGAATTGGGCTAAATGTTaGTTTGTTCCCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVNWAKC*FVPKDF
Trigger: AAAATCCTTGGGAACAAAGCAACATTTAGCCCAATT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCSKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGAACCTCAATGTCTTTaGTTCTGGCAACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPEPQCL*FWQPPR
Trigger: TCGAGGAGGTTGCCAGAAGCAAAGACATTGAGGTTC...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGAACCTCAATGTCTTTaGTTCTGGCAACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMEPQCL*FWQPPR
Trigger: TCGAGGAGGTTGCCAGAAGCAAAGACATTGAGGTTC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGAACCTCAATGTCTTTaGTTCTGGCAACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPEPQCL*FWQPPR
Trigger: TCGAGGAGGTTGCCAGAAGCAAAGACATTGAGGTTC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFCVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADCVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLCVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GGTCAGAGCTGTCATCCAGACGGTCCAGTAACCCACCAGTTAGTCTTCGAGCTTTCTAGAAAGGACACTTaGTCTAGAGTATCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GQSCHPDGPVTHQLVFELSRKDT*SRVSSS
Trigger: AGAAGATGATACTCTAGAGCAAGTGTCCTTTCTAGA...AAGCTCGAAGACTAACTGGTGGGTTACTGGACCGTCTGGATGACAGCTCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCGGGTAGTGATCCTCTaGTCCTCCTCTGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCRVVIL*SSSELE
Trigger: TTCAAGCTCAGAGGAGGAGCAGAGGATCACTACCCG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAGAGTTCACGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAGAGACCACTTCCACATaGCCTTCTTTGGAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ESSRVDLSLKHWASSTTTETTST*PSLEAR
Trigger: TCTTGCTTCCAAAGAAGGCCATGTGGAAGTGGTCTC...TGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGAACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGAGACCACTTCCACATaGCCTTCTTTGGAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPETTST*PSLEAR
Trigger: TCTTGCTTCCAAAGAAGGCCATGTGGAAGTGGTCTC...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTCCAGGTGGTTCTCCTaGGCTGCCATATACAATGGT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDSRWFS*AAIYNG
Trigger: ACCATTGTATATGGCAGCCCAGGAGAACCACCTGGA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATCCAGGTGGTTCTCCTaGGCTGCCATATACAATGGT +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVSRWFS*AAIYNG
Trigger: ACCATTGTATATGGCAGCCCAGGAGAACCACCTGGA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGCGACAATCCATTCTTaGTTTTTGAAAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADATIHS*FLKGWG
Trigger: CCCCCATCCTTTCAAAAACCAAGAATGGATTGTCGC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTTGCTGGAGGAGGAGTTaGACGCAGTTTAAATGGTCT +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPCWRRS*TQFKWS
Trigger: AGACCATTTAAACTGCGTCCAACTCCTCCTCCAGCA...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTATCCAAAAGAACCTTaGCAACTTTGTAATGGCCGC +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFYPKEP*QLCNGR
Trigger: GCGGCCATTACAAAGTTGCCAAGGTTCTTTTGGATA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACTCCTCTCACATTGGTaGTGTTTGGGGAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLLLSHW*CLGRLH
Trigger: ATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCCTTCTTTGTTGTTATaGATAAAGATGCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVPSLLL*IKMLHD
Trigger: ATCATGGAGCATCTTTATCCATAACAACAAAGAAGG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATGGGGTGAGGCTCCCTaGTCCAAGAGCAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILWGEAP*SKSRRA
Trigger: GGCCCTTCTGCTCTTGGACCAGGGAGCCTCACCCCA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATTCTTTGCGGCTGCGTaGGGTGAGGCTCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILFFAAA*GEAPWS
Trigger: GGACCAGGGAGCCTCACCCCACGCAGCCGCAAAGAA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACAGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCCCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATACCTCTCCTTCCACCATaGGGGGTGGGTTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIPLLPP*GVGWPV
Trigger: AACTGGCCAACCCACCCCCCATGGTGGAAGGAGAGG...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CAACTCATGGCTTTGGTGTCATCTGAACCTCTCAACCTGTTCCTGAAGTCACATTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QLMALVSSEPLNLFLKSHFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...ATGTGACTTCAGGAACAGGTTGAGAGGTTCAGATGACACCAAAGCCATGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPSPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTACCACGGCAAAATACTaGGGGAAATCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFTTAKY*GKSFVI
Trigger: TATCACAAAGGATTTCCCCCAGTATTTTGCCGTGGT...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGAGGACGAGGGGCACGGTaGTGCTGCTCAGAATCCCAC +
Preference number: 4 (lower is better)
Translates to: EKGNIGIYLFREPRKFSRGRGAR*CCSESH
Trigger: GTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCC...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAACTCTACCGTGACAATTaGGCTAAATGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKLYRDN*AKCCFV
Trigger: AACAAAGCAACATTTAGCCCAATTGTCACGGTAGAG...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGATCTTGATGGAAAATaGCAGTCTGTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVDLDGK*QSVFFE
Trigger: TTCAAAGAAAACAGACTGCCATTTTCCATCAAGATC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFSLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISSLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTAAGTCTAGCTGCTGACGTAAGTGTACTTCCCACCTGGACTGACGTCACTGTCCATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: LSLAADVSVLPTWTDVTVHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...GACAGTGACGTCAGTCCAGGTGGGAAGTACACTTACGTCAGCAGCTAGACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACAACATCTGGAGACATaGCCGACTTGTGTTCAAACA +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTQHLET*PTCVQT
Trigger: TGTTTGAACACAAGTCGGCCATGTCTCCAGATGTTG...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp TTCACGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACGGCATCAGATTCTTCTaGGAAGCCCTCTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FTCRLVSETLGFIYYDKYGIRFF*EALWLF
Trigger: GAAGAGCCAGAGGGCTTCCCAGAAGAATCTGATGCC...GTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATGTCCAGAAGAAACCTaGCGACTTCCAGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLCPEET*RLPGGS
Trigger: AGAACCACCTGGAAGTCGTCAGGTTTCTTCTGGACA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTATGTGGAGCGGGGTaGAGCCACTCTTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFLCGAG*SHSLTP
Trigger: TGGAGTCAAAGAGTGGCTTCACCCCGCTCCACATAG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAATCCATACACACATCTATGTGGAGCGGGGTaGAGCCACTCTTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: SLKHWASSTTTNTNPYTHLCGAG*SHSLTP
Trigger: TGGAGTCAAAGAGTGGCTTCACCCCGCTCCACATAG...ATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR TCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATGTCATTCCGTGCGGTaGAGTCCACAGCAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILCHSVR*SPQQPL
Trigger: GAGCGGCTGCTGTGGACTTCACCGCACGGAATGACA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTCCATTCTTGGTTTTTaGAAGGATGGGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDSILGF*KDGGGS
Trigger: AGATCCGCCCCCATCCTTTCAAAAACCAAGAATGGA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTACCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CCCATAGGACAGGCAATAACAGCCTTGAATGACATTAAGCATTCATTAATACTACGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: PIGQAITALNDIKHSLILRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...TAGTATTAATGAATGCTTAATGTCATTCAAGGCTGTTATTGCCTGTCCTATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAARPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATACGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GAGGCACGAAGTTCTATAGTTGCTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: EARSSIVAVPVASFWAPHKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...GTGAGGAGCCCAGAAAGAAGCCACAGGAACAGCAACTATAGAACTTCGTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: YLFREPRKFSRFLSLAADLLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAALLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAACTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLELLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCTTTTGAGAGCTTCGTaGATAACAGGATCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLLLRAS*ITGSKV
Trigger: GACTTTGGATCCTGTTATTCACGAAGCTCTCAAAAG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACAGGAAGCAAGATGGAGTaGATTCAATCCATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTGSKME*IQSILV
Trigger: AACCAGAATGGATTGAATGCACTCCATCTTGCTTCC...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp CTCCTCCCATACCCATGTATGGGTATAACTTCTAGCACTTCTACAATAGCTCACGTGGTTCTCCTGGGCTaGCATATACAATGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LLPYPCMGITSSTSTIAHVVLLG*HIQWCE
Trigger: TTCACACCATTGTATATGGCAGCCCAGGAGAACCAC...GTGAGCTATTGTAGAAGTGCTAGAAGTTATACCCATACATGGGTATGGGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR GCA 90 bp ATTTCATACATGTATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCGCGTTTGTGTCATTCTaGAGGAGCAGAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: ISYMYTMGYDHNHPPITLAFVSF*RSRAAA
Trigger: GGCAGCAGCTCTGCTCCTGCAGAATGACACAAACGC...GAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATACATGTATGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCTTGGCATTAACTTTTaGAGAATGCTGCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLLGINF*RMLQQK
Trigger: TTTCTGCTGCAGCATTCTGCAAAAGTTAATGCCAAG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTACATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCTAAAATGGTCATCTTaGTGGAAAGGGTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPLKWSS*WKGLGG
Trigger: ACCACCCAACCCTTTCCAGCAAGATGACCATTTTAG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CAACTCATGGCTTTGGTGTCATCTGAACCTCTCAACCTGTTCCTGAAGTCACATCTAAAATGGTCATCTTaGTGGAAAGGGTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: QLMALVSSEPLNLFLKSHLKWSS*WKGLGG
Trigger: ACCACCCAACCCTTTCCAGCAAGATGACCATTTTAG...ATGTGACTTCAGGAACAGGTTGAGAGGTTCAGATGACACCAAAGCCATGAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPCVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTACGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGAAGGTGTTTTCTCACTaGGGGTTTCAAAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMKVFSH*GFQSHC
Trigger: ACAGTGGCTTTGAAACCCGCAGTGAGAAAACACCTT...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR GCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGGACCTTTTTCGATGTaGACTTCTATAATGCGCTCC +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPGPFSM*TSIMRS
Trigger: GGAGCGCATTATAGAAGTGCACATCGAAAAAGGTCC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTCTTTGGAAGCAAGATaGAGTGCATTCAATCCATTC +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDISLEAR*SAFNPF
Trigger: GAATGGATTGAATGCACTCCATCTTGCTTCCAAAGA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATGTTTCCTTTCTTTGTaGCGGCATCAACATTGGCTT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTCFLSL*RHQHWL
Trigger: AAGCCAATGTTGATGCCGCCACAAAGAAAGGAAACA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTGTTTCCTTTCTTTGTaGCGGCATCAACATTGGCTT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFCFLSL*RHQHWL
Trigger: AAGCCAATGTTGATGCCGCCACAAAGAAAGGAAACA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CATACATGTATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCTCCATCCAGGTGGTTCTCCTaGGCTGCCATATACAATGGT +
Preference number: 4 (lower is better)
Translates to: HTCIQWVMIITTLRLPSPSRWFS*AAIYNG
Trigger: ACCATTGTATATGGCAGCCCAGGAGAACCACCTGGA...TGGAGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATACATGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTCCAGGTGGTTCTCCTaGGCTGCCATATACAATGGT +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCSRWFS*AAIYNG
Trigger: ACCATTGTATATGGCAGCCCAGGAGAACCACCTGGA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTCACGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTCCAGGTGGTTCTCCTaGGCTGCCATATACAATGGT +
Preference number: 4 (lower is better)
Translates to: FTCRLVSETLGFIYYDKYSRWFS*AAIYNG
Trigger: ACCATTGTATATGGCAGCCCAGGAGAACCACCTGGA...GTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACAGAGCCACGGCCAATaGCGTGAAGCCGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILQSHGQ*REAVLC
Trigger: ACAGAGGACGGCTTCACGCCATTGGCCGTGGCTCTG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTTTTTGCAGGCGATATaGAGAGGGGTGAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDFLQAI*RGVKPF
Trigger: GAATGGCTTCACCCCTCTCCATATCGCCTGCAAAAA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGGCAGCAACATGGATTaGGGTAAGGCCCGACTCGGT +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAGSNMD*GKARLG
Trigger: ACCGAGTCGGGCCTTACCCCAATCCATGTTGCTGCC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCATGTGGAGTGGAGTCTaGTCATCCTTAGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPMWSGV*SSLAFA
Trigger: AGCAAAAGCTAAGGATGACCAGACTCCACTCCACAT...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGATGTGGAGTGGAGTCTaGTCATCCTTAGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMMWSGV*SSLAFA
Trigger: AGCAAAAGCTAAGGATGACCAGACTCCACTCCACAT...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCAGTCGGGCTGAGATGTaGAGTGGAGTCTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFSRAEM*SGVWSS
Trigger: GGATGACCAGACTCCACTCCACATCTCAGCCCGACT...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAAAGTTGTTGCTGCATTaGGGGATGCTCCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVKLLLH*GMLLAV
Trigger: TACAGCAAGGAGCATCCCCCAATGCAGCAACAACTT...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCACCACGGCAAAATACTaGGGGAAATCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLTTAKY*GKSFVI
Trigger: TATCACAAAGGATTTCCCCCAGTATTTTGCCGTGGT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCCCTCAGGACCGATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATCGGTCCTGAGGG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTCTACCGTGACAATTaGGCTAAATGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFLYRDN*AKCCFV
Trigger: AACAAAGCAACATTTAGCCCAATTGTCACGGTAGAG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCTCTACCGTGACAATTaGGCTAAATGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLLYRDN*AKCCFV
Trigger: AACAAAGCAACATTTAGCCCAATTGTCACGGTAGAG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTACCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCCCATAATCAAATATTaGTCCTTCCAGCAGAGTTAC +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIPIIKY*SFQQSY
Trigger: GTAACTCTGCTGGAAGGACCAATATTTGATTATGGG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLTSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFTSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TCCGTGTGTTTTTGGTTTCAGGTTCTCCTTGATGCTCTGTTTCCCTATATCGTTCCATCTGCCTCTTTCTaGTTGGAAGCTTTTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SVCFWFQVLLDALFPYIVPSASF*LEAFVA
Trigger: CGCCACAAAAGCTTCCAACCAGAAAGAGGCAGATGG...AACGATATAGGGAAACAGAGCATCAAGGAGAACCTGAAACCAAAAACACACGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CAA 72 bp CGACCACATCCGTGTGTTTTTGGTTTCAGGTTCTCCTaGATGCTCTGTTTCCCTATATCGTTTTGGGATTCC +
Preference number: 4 (lower is better)
Translates to: RPHPCVFGFRFS*MLCFPISFWDS
Trigger: GGAATCCCAAAACGATATAGGGAAACAGAGCATCAAGGAGAACCTGAAACCAAAAACACACGGATGTGGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATCCATTCTTGGTTTTTaGAAGGATGGGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKSILGF*KDGGGS
Trigger: AGATCCGCCCCCATCCTTTCAAAAACCAAGAATGGA...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTTCTTATTGCTCAGGTTaGCATTCGCGTTTCTACTCA +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPSYCSG*HSRFYS
Trigger: TGAGTAGAAACGCGAATGTCAACCTGAGCAATAAGA...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTCTTATTGCTCAGGTTaGCATTCGCGTTTCTACTCA +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMSYCSG*HSRFYS
Trigger: TGAGTAGAAACGCGAATGTCAACCTGAGCAATAAGA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTCTTATTGCTCAGGTTaGCATTCGCGTTTCTACTCA +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPSYCSG*HSRFYS
Trigger: TGAGTAGAAACGCGAATGTCAACCTGAGCAATAAGA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACTCATGGACCCAAAATaGGGGATTTCCACAATGACG +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLLMDPK*GISTMT
Trigger: CGTCATTGTGGAAATCCCTCATTTTGGGTCCATGAG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTTTTTACTGTCAAACTaGTGTTCCTTCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADFLLSN*CSFQVS
Trigger: AGAGACCTGGAAGGAACATCAGTTTGACAGTAAAAA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTTTTTACTGTCAAACTaGTGTTCCTTCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFFLLSN*CSFQVS
Trigger: AGAGACCTGGAAGGAACATCAGTTTGACAGTAAAAA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAATTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGCGGCCACAGGGCTCTTaGCTGGTGTCTCTGATCTTG +
Preference number: 4 (lower is better)
Translates to: KIYFISSSSEISGKKEKGRPQGS*LVSLIL
Trigger: CAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCG...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR TCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCCTCAAACAGAGATTTaGCCTTGTCTTCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPPQTEI*PCLLSL
Trigger: AAGTGACAGAAGACAAGGTCAAATCTCTGTTTGAGG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGTAGCCAGTTCTGCTCGCTaGACACGGTTAAGCATAGCC +
Preference number: 4 (lower is better)
Translates to: LFREPRKFSRFLSLAADVASSAR*TRLSIA
Trigger: GGCTATGCTTAACCGTGTTCAGCGAGCAGAACTGGC...TACGTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILISGRL*GATLVP
Trigger: AGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAAT...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTATTTCTGGTAGGCTGTaGGGGGCGACACTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGISGRL*GATLVP
Trigger: AGGAACCAGTGTCGCCCCTCACAGCCTACCAGAAAT...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACTTCTTCCTGGAGGTTaGGCCTGGCTTTGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILLLPGG*AWLCRQ
Trigger: CTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATTGATGTTTCTTATCTaGTTCCATCTGGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTLMFLI*FHLVSI
Trigger: GATGCTGACCAGATGGAATCAGATAAGAAACATCAA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp GACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAATCCATACTCTTCCTTCTCTTCCTaGTTGTGCCACTGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: DLSLKHWASSTTTNTNPYSSFSS*LCHCSG
Trigger: GCCTGAACAGTGGCACAATCAGGAAGAGAAGGAAGA...GTATGGATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR GCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGGAAGCAAGATGGAGTaGATTCAATCCATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMGSKME*IQSILV
Trigger: AACCAGAATGGATTGAATGCACTCCATCTTGCTTCC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp ATTTCATACATGTATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCACATTGGCTTCCCTCTaGAGCAGCTCAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: ISYMYTMGYDHNHPPITLTLASL*SSSETT
Trigger: AGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGT...GAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATACATGTATGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR GCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCCCAGAAGTTGTTGCTaGATTGGGGGATGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFPRSCC*IGGCSL
Trigger: CAAGGAGCATCCCCCAATGCAGCAACAACTTCTGGG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCTTGGCATTAACTTTTaGAGAATGCTGCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLLGINF*RMLQQK
Trigger: TTTCTGCTGCAGCATTCTGCAAAAGTTAATGCCAAG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAGCCTACGTAACCTTCTaGTGGCAGGGAGTCATCACC +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIAYVTF*WQGVIT
Trigger: GGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGC...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGCCTACGTAACCTTCTaGTGGCAGGGAGTCATCACC +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAAYVTF*WQGVIT
Trigger: GGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFSKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCAGAATCGTCCATTTTaGTGTCTTCTAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLQNRPF*CLLKKC
Trigger: ACACTTCTTTAGAAGACAGCAAAATGGACGATTCTG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCGTGTTCAAACAGCCCTaGCAGCTCTTTGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFVFKQP*QLFGRV
Trigger: GACCCTTCCAAAGAGCTGGCAGGGCTGTTTGAACAC...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR GCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTGTCAATTGCACCACTaGGAGTCATCTCAAACATTT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFCQLHH*ESSQTF
Trigger: AAATGTTTGAGATGACTCGCAGTGGTGCAATTGACA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTGTTTCCTTTCTTTGTaGCGGCATCAACATTGGCTT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMCFLSL*RHQHWL
Trigger: AAGCCAATGTTGATGCCGCCACAAAGAAAGGAAACA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ACTACGACAAATACTAATCCATACACACATCCAGTACTCTTTTCCAATCAAGACCTGACGACTTCCAGGTaGTTCTCCTGGGCTGCCATA +
Preference number: 4 (lower is better)
Translates to: TTTNTNPYTHPVLFSNQDLTTSR*FSWAAI
Trigger: TATGGCAGCCCAGGAGAACCACCTGGAAGTCGTCAG...GTCTTGATTGGAAAAGAGTACTGGATGTGTGTATGGATTAGTATTTGTCGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTATCCAAAAGAACCTTaGCAACTTTGTAATGGCCGC +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPYPKEP*QLCNGR
Trigger: GCGGCCATTACAAAGTTGCCAAGGTTCTTTTGGATA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAAAGTCGGGCTGAGATGTaGAGTGGAGTCTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLESRAEM*SGVWSS
Trigger: GGATGACCAGACTCCACTCCACATCTCAGCCCGACT...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAACAAGCTTTCCGTATTTaGCTGCCACGTGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEQAFRI*LPRAEG
Trigger: CCCCTCTGCACGTGGCAGCCAAATACGGAAAGCTTG...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCACTCCAGCAGGGACGTaGCTATGTCCATCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFTPAGT*LCPSGS
Trigger: AGAACCAGATGGACATAGCCACGTCCCTGCTGGAGT...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCSPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCACCACGGCAAAATACTaGGGGAAATCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPTTAKY*GKSFVI
Trigger: TATCACAAAGGATTTCCCCCAGTATTTTGCCGTGGT...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCTTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTCTACCGTGACAATTaGGCTAAATGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTLYRDN*AKCCFV
Trigger: AACAAAGCAACATTTAGCCCAATTGTCACGGTAGAG...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTACAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAGGCACGAAGTTCTATAGTTGCTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACGATCTTGATGGAAAATaGCAGTCTGTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: EARSSIVAVPVASFWAPHDLDGK*QSVFFE
Trigger: TTCAAAGAAAACAGACTGCCATTTTCCATCAAGATC...GTGAGGAGCCCAGAAAGAAGCCACAGGAACAGCAACTATAGAACTTCGTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVSLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCCATAATCAAATATTaGTCCTTCCAGCAGAGTTAC +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPIIKY*SFQQSY
Trigger: GTAACTCTGCTGGAAGGACCAATATTTGATTATGGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACCCATAATCAAATATTaGTCCTTCCAGCAGAGTTAC +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTPIIKY*SFQQSY
Trigger: GTAACTCTGCTGGAAGGACCAATATTTGATTATGGG...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGTATGCTCTATGTTTCCCTaGGAAGGCACCAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: LFREPRKFSRFLSLAADVCSMFP*EGTSPS
Trigger: TGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCA...TACGTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTGCTCTATGTTTCCCTaGGAAGGCACCAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGCSMFP*EGTSPS
Trigger: TGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAATGCTCTATGTTTCCCTaGGAAGGCACCAGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLECSMFP*EGTSPS
Trigger: TGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCA...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADTSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTTATCTTGGTCATGCTaGGAAAAGTCATCGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDLSWSC*EKSSGD
Trigger: GTCTCCCGATGACTTTTCCCAGCATGACCAAGATAA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTCCAGGGTGAAAAACTaGGCCCCTGACTTGGGATCG +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAASRVKN*APDLGS
Trigger: CGATCCCAAGTCAGGGGCCCAGTTTTTCACCCTGGA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CAA 72 bp TTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTTaGTGTTCTGTGAGGCGGGTGCCTTATAATTCTTTA +
Preference number: 4 (lower is better)
Translates to: LGRLSLDAFVIS*CSVRRVPYNSL
Trigger: TAAAGAATTATAAGGCACCCGCCTCACAGAACACAAAGATATCACAAATGCATCCAAGGACAGGCGTCCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR CAA 72 bp CCACAGATAGATGCTCCCTGGGAACAGCATAACTTCTaGACACACTGGCCTTATAAATCCCATCTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: PQIDAPWEQHNF*THWPYKSHLLL
Trigger: TAGAAGAAGATGGGATTTATAAGGCCAGTGTGTCAAGAAGTTATGCTGTTCCCAGGGAGCATCTATCTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp CGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAATGGTGTGAAGCCATTCTaGGATTGTGCGTTGACATTC +
Preference number: 4 (lower is better)
Translates to: RVDLSLKHWASSTTTNTNGVKPF*DCALTF
Trigger: GAATGTCAACGCACAATCTCAGAATGGCTTCACACC...ATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR TCA 90 bp CCGCTGTGGGAATGGCAATCACTTACATGTATTTTCTCTATAAGAGTTTATTATGCAACGTGGCCACATTaGTGTTCCCATAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLWEWQSLTCIFSIRVYYATWPH*CSHSGQ
Trigger: CTGCCCACTATGGGAACATCAATGTGGCCACGTTGC...ATAATAAACTCTTATAGAGAAAATACATGTAAGTGATTGCCATTCCCACAGCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR TCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGACTCGGTTACGGCTTaGATAGATGCACCGTGCTTC +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAADSVTA*IDAPCF
Trigger: GAAGCACGGTGCATCTATTCAAGCCGTAACCGAGTC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGCTTTTGCTTCTACCTaGGCCCCATCTTGGACCAGA +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAAFAST*APSWTR
Trigger: TCTGGTCCAAGATGGGGCTCAGGTAGAAGCAAAAGC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAAGCTTTTGCTTCTACCTaGGCCCCATCTTGGACCAGA +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEAFAST*APSWTR
Trigger: TCTGGTCCAAGATGGGGCTCAGGTAGAAGCAAAAGC...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTTTTTACTGTCAAACTaGTGTTCCTTCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMFLLSN*CSFQVS
Trigger: AGAGACCTGGAAGGAACATCAGTTTGACAGTAAAAA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGTTCCCATTGAGCTGGTaGGGTGCCTCCTGTGATGCT +
Preference number: 4 (lower is better)
Translates to: KIYFISSSSEISGKKEKGFPLSW*GASCDA
Trigger: AGCATCACAGGAGGCACCTCACCAGCTCAATGGGAA...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATACAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACAAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATCTACTTCTTCAAGTTaGATGTCCTCAAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTSTSSS*MSSNRD
Trigger: ATCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAGCCAGTTCTGCTCGCTaGACACGGTTAAGCATAGCC +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILASSAR*TRLSIA
Trigger: GGCTATGCTTAACCGTGTTCAGCGAGCAGAACTGGC...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGTACTGCCAACCTGCAAGTaGAGACATTGCCAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LFREPRKFSRFLSLAADVLPTCK*RHCQFC
Trigger: GCAGAACTGGCAATGTCTTCACTTGCAGGTTGGCAG...TACGTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCTGTCAGTGTCCCCTGTaGTGGCATCTTCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILCQCPL*WHLHCV
Trigger: CACACAGTGAAGATGCCATCACAGGGGACACTGACA...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATGTGAGTCTCTTCTTTaGCACGCATGCCTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLCESLL*HACLCL
Trigger: TAAGCAAAGGCATGCGTGTCAAAGAAGAGACTCACA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR GCA 90 bp CTTCATCTACTACGACAAATACTAATCCATACACACATCCAGTACTCTTTTCCAACATTGGCTTCCCTCTaGAGCAGCTCAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: LHLLRQILIHTHIQYSFPTLASL*SSSETT
Trigger: AGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGT...TGGAAAAGAGTACTGGATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR GCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCACATTGGCTTCCCTCTaGAGCAGCTCAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAATLASL*SSSETT
Trigger: AGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGT...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp GATAACCCTTTATGGTCACAAATCCCTGAGAAAAATGACTCTCCTTCCTCTAGTGCCATTCTGAGATTGTaGGTTGACATTCGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: DNPLWSQIPEKNDSPSSSAILRL*VDIRSV
Trigger: AACGGAGCGAATGTCAACGCACAATCTCAGAATGGC...ACTAGAGGAAGGAGAGTCATTTTTCTCAGGGATTTGTGACCATAAAGGGTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR GCA 90 bp CTGAAACACTGGGCTTCATCTACTACGACAAATACTAATCCATACACACATCCAGTGGTTCTCCTGGGCTaGCATATACAATGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: LKHWASSTTTNTNPYTHPVVLLG*HIQWCE
Trigger: TTCACACCATTGTATATGGCAGCCCAGGAGAACCAC...TGGATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR GCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTCCTTGTGTGGCCATGTaGAGTGGCGACAATCCATTC +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGPCVAM*SGDNPF
Trigger: GAATGGATTGTCGCCACTGCACATGGCCACACAAGG...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp CCCATAGGACAGGCAATAACAGCCTTGAATGACATTAAGCATTCATTAATACTACTTTCCGTATTTGGCTaGCACGTGCAGAGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PIGQAITALNDIKHSLILLSVFG*HVQRGE
Trigger: TTCACCCCTCTGCACGTGGCAGCCAAATACGGAAAG...TAGTATTAATGAATGCTTAATGTCATTCAAGGCTGTTATTGCCTGTCCTATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGGCCTACGTAACCTTCTaGTGGCAGGGAGTCATCACC +
Preference number: 4 (lower is better)
Translates to: KIYFISSSSEISGKKEKGAYVTF*WQGVIT
Trigger: GGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGC...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAGCCTACGTAACCTTCTaGTGGCAGGGAGTCATCACC +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILAYVTF*WQGVIT
Trigger: GGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGC...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGTACTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: LFREPRKFSRFLSLAADVLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...TACGTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAALVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTCTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACC +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGLVNVR*CSLDGT
Trigger: GGTACCATCCAAAGAGCAGCACCTGACGTTCACGAG...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTAAGTCTAGCTGCTGACGTAAGTGTACTTCCCACCTGGACTGACGTCACTGTCAATTGGGCTAAATGTTaGTTTGTTCCCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: LSLAADVSVLPTWTDVTVNWAKC*FVPKDF
Trigger: AAAATCCTTGGGAACAAAGCAACATTTAGCCCAATT...GACAGTGACGTCAGTCCAGGTGGGAAGTACACTTACGTCAGCAGCTAGACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILSKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTCGAAGTTCTCCTGCTaGTCCAGGGTTTTGTCCACC +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGSKFSC*SRVLST
Trigger: GGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCTCCTCGAAGTTCTCCTaGTGCTCCAGGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILSSKFS*CSRVLS
Trigger: GGACAAAACCCTGGAGCAGCAGGAGAACTTCGAGGA...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTCCTCGAAGTTCTCCTaGTGCTCCAGGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAASSKFS*CSRVLS
Trigger: GGACAAAACCCTGGAGCAGCAGGAGAACTTCGAGGA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAATCCTCGAAGTTCTCCTaGTGCTCCAGGGTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLESSKFS*CSRVLS
Trigger: GGACAAAACCCTGGAGCAGCAGGAGAACTTCGAGGA...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGACGCTCACAAGGACTCTaGGGACTCATGCTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: EKGNIGIYLFREPRKFSRRSQGL*GLMLGS
Trigger: TGAACCCAGCATGAGTCCGCAGAGTCCTTGTGAGCG...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACGCTCACAAGGACTCTaGGGACTCATGCTGGGTTCA +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILRSQGL*GLMLGS
Trigger: TGAACCCAGCATGAGTCCGCAGAGTCCTTGTGAGCG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAACTAAAATGGTCATCTTaGTGGAAAGGGTTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKLKWSS*WKGLGG
Trigger: ACCACCCAACCCTTTCCAGCAAGATGACCATTTTAG...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACCCTACTTTTCTAGTCTaGGGTCTCAGTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: YLFREPRKFSRFLSLAADPTFLV*GLSGSA
Trigger: GGCAGAGCCACTGAGACCGCAGACTAGAAAAGTAGG...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTACTTTTCTAGTCTaGGGTCTCAGTGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAPTFLV*GLSGSA
Trigger: GGCAGAGCCACTGAGACCGCAGACTAGAAAAGTAGG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATGTGTGGTTTCCATTTaGTTCGATCTTCCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKCVVSI*FDLPRF
Trigger: GAACCTGGGAAGATCGAAGCAAATGGAAACCACACA...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCGCTCACAAGGACTCTaGGGACCTTTTTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAARSQGL*GPFSMC
Trigger: GCACATCGAAAAAGGTCCGCAGAGTCCTTGTGAGCG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR GCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTGGGGAGACGGAGGCTaGTTTTGCTGTCTAGCTGTA +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAWGDGG*FCCLAV
Trigger: TACAGCTAGACAGCAAAAGCAGCCTCCGTCTCCCCA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACCCTGCACGTCATCCTaGTTCCTCTCTTGTGGACCA +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILPCTSS*FLSCGP
Trigger: TGGTCCACAAGAGAGGAAGCAGGATGACGTGCAGGG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TACATGTATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCTCCAACGGCTGCCATATACAATaGTGTGAAGCCATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: YMYTMGYDHNHPPITLSNGCHIQ*CEAILR
Trigger: TCTCAGAATGGCTTCACACCATTGTATATGGCAGCC...GTTGGAGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATACATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGCGACAATCCATTCTTaGTTTTTGAAAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLATIHS*FLKGWG
Trigger: CCCCCATCCTTTCAAAAACCAAGAATGGATTGTCGC...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTGTGGCCATGTGCAGTaGCGACAATCCATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFCGHVQ*RQSILG
Trigger: ACCAAGAATGGATTGTCGCCACTGCACATGGCCACA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCAATGGTCTCCTTGTGTaGCCATGTGCAGTGGCGACA +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAANGLLV*PCAVAT
Trigger: TGTCGCCACTGCACATGGCCACACAAGGAGACCATT...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTCTCTCCTCTCACATTaGTGGTGTTTGGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGSLLSH*WCLGRL
Trigger: GAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAAGTCGGGCTGAGATGTaGAGTGGAGTCTGGTCATCC +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILSRAEM*SGVWSS
Trigger: GGATGACCAGACTCCACTCCACATCTCAGCCCGACT...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCCTTCTTTGTTGTTATaGATAAAGATGCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFPSLLL*IKMLHD
Trigger: ATCATGGAGCATCTTTATCCATAACAACAAAGAAGG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGGCCGCGATGTGCAGTaGTGTATAGCCATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAGRDVQ*CIAILC
Trigger: GCAAAGAATGGCTATACACCACTGCACATCGCGGCC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCACTCCAGCAGGGACGTaGCTATGTCCATCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAATPAGT*LCPSGS
Trigger: AGAACCAGATGGACATAGCCACGTCCCTGCTGGAGT...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAACCACGGCAAAATACTaGGGGAAATCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVTTAKY*GKSFVI
Trigger: TATCACAAAGGATTTCCCCCAGTATTTTGCCGTGGT...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATACCACGGCAAAATACTaGGGGAAATCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDTTAKY*GKSFVI
Trigger: TATCACAAAGGATTTCCCCCAGTATTTTGCCGTGGT...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATTTTACCGTTTCCTCTaGCACGGGCTGAGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILFYRFL*HGLSLE
Trigger: CTCCAGGCTCAGCCCGTGCCAGAGGAAACGGTAAAA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTAGTGATTGGCTTGCTGAAAGGGGTCTACATCTCAGAGCCAGTACACAATACACTCTACCGTGACAATTaGGCTAAATGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: LVIGLLKGVYISEPVHNTLYRDN*AKCCFV
Trigger: AACAAAGCAACATTTAGCCCAATTGTCACGGTAGAG...TGTATTGTGTACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCTCTACCGTGACAATTaGGCTAAATGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPLYRDN*AKCCFV
Trigger: AACAAAGCAACATTTAGCCCAATTGTCACGGTAGAG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAACAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGATCTTGATGGAAAATaGCAGTCTGTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLDLDGK*QSVFFE
Trigger: TTCAAAGAAAACAGACTGCCATTTTCCATCAAGATC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KIYFISSSSEISGKKEKGREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILREAKL*RLSAFS
Trigger: TGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCT...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTAAGTCTAGCTGCTGACGTAAGTGTACTTCCCACCTGGACTGACGTCACTGTCTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: LSLAADVSVLPTWTDVTVFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...GACAGTGACGTCAGTCCAGGTGGGAAGTACACTTACGTCAGCAGCTAGACTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCCTTGCTGGAAAGGGTTaGGTGGTGTGCAGTACAACC +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILLAGKG*VVCSTT
Trigger: GGTTGTACTGCACACCACCCAACCCTTTCCAGCAAG...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTCTTGCTGGAAAGGGTTaGGTGGTGTGCAGTACAACC +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGLAGKG*VVCSTT
Trigger: GGTTGTACTGCACACCACCCAACCCTTTCCAGCAAG...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPTSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMTSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGAAGGGACTTTTATCTTaGTCATGCTGGGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMKGLLS*SCWEKS
Trigger: TGACTTTTCCCAGCATGACCAAGATAAAAGTCCCTT...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp TTCTGGTGCCTGAAATATTCCCATAATCAAATATTGGTCCTTCCAGCAGAGTTAACGGAGTTAAAGTGCTaGCTCTCAACTACCCCTTCG +
Preference number: 4 (lower is better)
Translates to: FWCLKYSHNQILVLPAELTELKC*LSTTPS
Trigger: CGAAGGGGTAGTTGAGAGCCAGCACTTTAACTCCGT...TAACTCTGCTGGAAGGACCAATATTTGATTATGGGAATATTTCAGGCACCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp CGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAATCGTCCACTCCATTTTTaGTGTAGTCAAGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: RVDLSLKHWASSTTTNTNRPLHF*CSQGPF
Trigger: AAAAGGCCCTTGACTACATCAAAAATGGAGTGGACG...ATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR TCA 90 bp ATTTCATACATGTATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCGGTGTGAAGCCATTCTaGGATTGTGCGTTGACATTC +
Preference number: 4 (lower is better)
Translates to: ISYMYTMGYDHNHPPITLGVKPF*DCALTF
Trigger: GAATGTCAACGCACAATCTCAGAATGGCTTCACACC...GAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATACATGTATGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR TCA 90 bp CTTCATCTACTACGACAAATACTAATCCATACACACATCCAGTACTCTTTTCCATGTCCAGAAGAAACCTaGCGACTTCCAGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: LHLLRQILIHTHIQYSFPCPEET*RLPGGS
Trigger: AGAACCACCTGGAAGTCGTCAGGTTTCTTCTGGACA...TGGAAAAGAGTACTGGATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR TCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTGATAAAGATGCTCCATaGTCCAGGAGGAACGCAGCT +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGDKDAP*SRRNAA
Trigger: AGCTGCGTTCCTCCTGGATCATGGAGCATCTTTATC...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTCATGGACCCAAAATaGGGGATTTCCACAATGACG +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFLMDPK*GISTMT
Trigger: CGTCATTGTGGAAATCCCTCATTTTGGGTCCATGAG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATTTTTACTGTCAAACTaGTGTTCCTTCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVFLLSN*CSFQVS
Trigger: AGAGACCTGGAAGGAACATCAGTTTGACAGTAAAAA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGAGAGGGGTTGTTCCTGTaGTGTCTTCCCATTGAGCTG +
Preference number: 4 (lower is better)
Translates to: EKGNIGIYLFREPRKFSREGLFL*CLPIEL
Trigger: CAGCTCAATGGGAAGACATCACAGGAACAACCCCTC...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGACAACTAAGTCCCAGGTaGTCGGCTACTATCGCCATC +
Preference number: 4 (lower is better)
Translates to: EKGNIGIYLFREPRKFSRQLSPR*SATIAI
Trigger: GATGGCGATAGTAGCCGATCACCTGGGACTTAGTTG...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTTCTACTTCTTCAAGTTaGATGTCCTCAAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPSTSSS*MSSNRD
Trigger: ATCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGA...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAGTAACTCACTTCCTCTaGACTGGGAGTTTCCGGGGT +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILVTHFL*TGSFRG
Trigger: ACCCCGGAAACTCCCAGTTCAGAGGAAGTGAGTTAC...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp TACATGTATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCTCCAACGGAAGCAAGATGGAGTaGATTCAATCCATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: YMYTMGYDHNHPPITLSNGSKME*IQSILV
Trigger: AACCAGAATGGATTGAATGCACTCCATCTTGCTTCC...GTTGGAGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATACATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR GCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTGGAAGCAAGATGGAGTaGATTCAATCCATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCGSKME*IQSILV
Trigger: AACCAGAATGGATTGAATGCACTCCATCTTGCTTCC...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TCACGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTGGAAGCAAGATGGAGTaGATTCAATCCATTCTGGTT +
Preference number: 4 (lower is better)
Translates to: SRVDLSLKHWASSTTTNTGSKME*IQSILV
Trigger: AACCAGAATGGATTGAATGCACTCCATCTTGCTTCC...AGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR GCA 90 bp TCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAATCCATACACACATGCCATTCTGAGATTGTaGGTTGACATTCGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: SLKHWASSTTTNTNPYTHAILRL*VDIRSV
Trigger: AACGGAGCGAATGTCAACGCACAATCTCAGAATGGC...ATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR GCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATAATTGGGCTAAATGTTaGTTTGTTCCCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADNWAKC*FVPKDF
Trigger: AAAATCCTTGGGAACAAAGCAACATTTAGCCCAATT...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCAATTGGGCTAAATGTTaGTTTGTTCCCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFNWAKC*FVPKDF
Trigger: AAAATCCTTGGGAACAAAGCAACATTTAGCCCAATT...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCAATTGGGCTAAATGTTaGTTTGTTCCCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLNWAKC*FVPKDF
Trigger: AAAATCCTTGGGAACAAAGCAACATTTAGCCCAATT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR GCA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACAAATTGGGCTAAATGTTaGTTTGTTCCCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTNWAKC*FVPKDF
Trigger: AAAATCCTTGGGAACAAAGCAACATTTAGCCCAATT...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCGAACCTCAATGTCTTTaGTTCTGGCAACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFEPQCL*FWQPPR
Trigger: TCGAGGAGGTTGCCAGAAGCAAAGACATTGAGGTTC...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCAGAATCGTCCATTTTaGTGTCTTCTAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPQNRPF*CLLKKC
Trigger: ACACTTCTTTAGAAGACAGCAAAATGGACGATTCTG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATCTTTGGAAGCAAGATaGAGTGCATTCAATCCATTC +
Preference number: 4 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVSLEAR*SAFNPF
Trigger: GAATGGATTGAATGCACTCCATCTTGCTTCCAAAGA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAATGTGGCCATGTGCAGTaGCGACAATCCATTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLECGHVQ*RQSILG
Trigger: ACCAAGAATGGATTGTCGCCACTGCACATGGCCACA...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACTCCTCTCACATTGGTaGTGTTTGGGGAGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILLLSHW*CLGRLH
Trigger: ATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCCTTCTTTGTTGTTATaGATAAAGATGCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADPSLLL*IKMLHD
Trigger: ATCATGGAGCATCTTTATCCATAACAACAAAGAAGG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATACTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKILLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGTACTCCTTAAGGTCCTGTaGCCCGAGATACTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LFREPRKFSRFLSLAADVLLKVL*PEILVS
Trigger: ACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAG...TACGTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGATCTTGATGGAAAATaGCAGTCTGTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLDLDGK*QSVFFE
Trigger: TTCAAAGAAAACAGACTGCCATTTTCCATCAAGATC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGATCTTGATGGAAAATaGCAGTCTGTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADDLDGK*QSVFFE
Trigger: TTCAAAGAAAACAGACTGCCATTTTCCATCAAGATC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGATCTTGATGGAAAATaGCAGTCTGTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: LKNMASCVVHCTCSVCISDLDGK*QSVFFE
Trigger: TTCAAAGAAAACAGACTGCCATTTTCCATCAAGATC...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACTCTGCGGACTCATGCTaGGTTCAGTCAAGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: YLFREPRKFSRFLSLAADSADSC*VQSSSC
Trigger: ACAGCTACTTGACTGAACCCAGCATGAGTCCGCAGA...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CCA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAACATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAATGGAGGTCCACCTGTTaGATGCTCTATGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEWRSTC*MLYVSL
Trigger: CAGGGAAACATAGAGCATCCAACAGGTGGACCTCCA...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDTSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTACAATCTGGAAAAATTaGAGCCTCTCTTCCACAAAA +
Preference number: 4 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPTIWKN*SLSSTK
Trigger: TTTTGTGGAAGAGAGGCTCCAATTTTTCCAGATTGT...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
3UTR CAA 72 bp AATGACATGCAAATGTACTCTCTGCCTCTTTGTTTATaGAAAGCGGCTTCTCTAGACCAAATAGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: NDMQMYSLPLCL*KAASLDQIGSL
Trigger: CAGAGAGCCTATTTGGTCTAGAGAAGCCGCTTTCAATAAACAAAGAGGCAGAGAGTACATTTGCATGTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCGTCCACTCCATTTTTaGTGTAGTCAAGGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFRPLHF*CSQGPF
Trigger: AAAAGGCCCTTGACTACATCAAAAATGGAGTGGACG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATGTCCAGAAGAAACCTaGCGACTTCCAGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILCPEET*RLPGGS
Trigger: AGAACCACCTGGAAGTCGTCAGGTTTCTTCTGGACA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp TTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGTACCCAACTGTAGTGTCTaGGGGAGTCAGAATCAAACT +
Preference number: 4 (lower is better)
Translates to: LFREPRKFSRFLSLAADVPNCSV*GSQNQT
Trigger: AGTTTGATTCTGACTCCCTCAGACACTACAGTTGGG...TACGTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCCTCATGGACCCAAAATaGGGGATTTCCACAATGACG +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILLMDPK*GISTMT
Trigger: CGTCATTGTGGAAATCCCTCATTTTGGGTCCATGAG...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAACTCATGGACCCAAAATaGGGGATTTCCACAATGACG +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLELMDPK*GISTMT
Trigger: CGTCATTGTGGAAATCCCTCATTTTGGGTCCATGAG...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATTTTTACTGTCAAACTaGTGTTCCTTCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLFLLSN*CSFQVS
Trigger: AGAGACCTGGAAGGAACATCAGTTTGACAGTAAAAA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTCTACTTCTTCAAGTTaGATGTCCTCAAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDSTSSS*MSSNRD
Trigger: ATCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAGCCATTCTGAGATTGTaGGTTGACATTCGCTCCGTT +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIAILRL*VDIRSV
Trigger: AACGGAGCGAATGTCAACGCACAATCTCAGAATGGC...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAAGTTCCATTACTCGGATaGGGTTCTTTTTGCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEVPLLG*GSFCRR
Trigger: TCGCCTGCAAAAAGAACCGCATCCGAGTAATGGAAC...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp GGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAA +
Preference number: 4 (lower is better)
Translates to: GEREYRNILIPRTQKILKHHAVP*VGASVQ
Trigger: TTGAACAGAAGCTCCTACGCAAGGGACAGCATGATG...CTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCGAACCTCAATGTCTTTaGTTCTGGCAACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILEPQCL*FWQPPR
Trigger: TCGAGGAGGTTGCCAGAAGCAAAGACATTGAGGTTC...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAGAACCTCAATGTCTTTaGTTCTGGCAACCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIEPQCL*FWQPPR
Trigger: TCGAGGAGGTTGCCAGAAGCAAAGACATTGAGGTTC...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGGCTCTGGCGTCTGTCTaGCTTCTCAGCCTTTTTATG +
Preference number: 4 (lower is better)
Translates to: KIYFISSSSEISGKKEKGALASV*LLSLFM
Trigger: CATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGC...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAACTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCAGAATCGTCCATTTTaGTGTCTTCTAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDQNRPF*CLLKKC
Trigger: ACACTTCTTTAGAAGACAGCAAAATGGACGATTCTG...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATATGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GCATGTAGTTCCCCGCTGTGGGAATGGCAATCACTTACATGTATTTTCTCTATATCTTTGGAAGCAAGATaGAGTGCATTCAATCCATTC +
Preference number: 4 (lower is better)
Translates to: ACSSPLWEWQSLTCIFSISLEAR*SAFNPF
Trigger: GAATGGATTGAATGCACTCCATCTTGCTTCCAAAGA...TATAGAGAAAATACATGTAAGTGATTGCCATTCCCACAGCGGGGAACTACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CCA 90 bp TCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAATCCATACACACATGGCTGCCATATACAATaGTGTGAAGCCATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: SLKHWASSTTTNTNPYTHGCHIQ*CEAILR
Trigger: TCTCAGAATGGCTTCACACCATTGTATATGGCAGCC...ATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATATGGTTTTTGAAAGGATaGGGGCGGATCTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIWFLKG*GRICQA
Trigger: TGCTTGACAGATCCGCCCCCATCCTTTCAAAAACCA...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTGGTTTTTGAAAGGATaGGGGCGGATCTGTCAAGCA +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAWFLKG*GRICQA
Trigger: TGCTTGACAGATCCGCCCCCATCCTTTCAAAAACCA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATATGGACGCAGTTTAAATaGTCTCCTTGTGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIWTQFK*SPCVAM
Trigger: CATGGCCACACAAGGAGACCATTTAAACTGCGTCCA...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGCCTTCTTTGTTGTTATaGATAAAGATGCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMPSLLL*IKMLHD
Trigger: ATCATGGAGCATCTTTATCCATAACAACAAAGAAGG...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GEREYRNILIPRTQKILKFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...CTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTTTCTACCAGCCTACTaGCTAATCCCTCTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAFLPAY*LIPLLP
Trigger: TGGAAGGAGAGGGATTAGCCAGTAGGCTGGTAGAAA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAASPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGSPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGACCCTCAGGACCGATCTaGTTGCTTTCCTGCTTAATC +
Preference number: 4 (lower is better)
Translates to: EKGNIGIYLFREPRKFSRPSGPI*LLSCLI
Trigger: GATTAAGCAGGAAAGCAACCAGATCGGTCCTGAGGG...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp AGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGAATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: RFISFHLPVRFQERRRKGMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...TCCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAATGGTGATCGGCTTATaGAACTTCCTTCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILMVIGL*NFLLLG
Trigger: GCCGAGGAGAAGGAAGTTCCATAAGCCGATCACCAT...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATACCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGCCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GEREYRNILIPRTQKILKPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...CTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTCCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCGGGTCGTTTGTTTTaGCAAACACAACGAACTTGG +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAPGRLF*QTQRTW
Trigger: CCAAGTTCGTTGTGTTTGCCAAAACAAACGACCCGG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGATCTTGATGGAAAATaGCAGTCTGTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: IIANIQESVKESRERWIPDLDGK*QSVFFE
Trigger: TTCAAAGAAAACAGACTGCCATTTTCCATCAAGATC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AGGGTGCTGCTTAGTGGTAGTTCACATCTTTTAGCATGCATGATGACCAGTACCTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: RVLLSGSSHLLACMMTSTFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...GGTACTGGTCATCATGCATGCTAAAAGATGTGAACTACCACTAAGCAGCACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACCCATAATCAAATATTaGTCCTTCCAGCAGAGTTAC +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLPIIKY*SFQQSY
Trigger: GTAACTCTGCTGGAAGGACCAATATTTGATTATGGG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCCCATAATCAAATATTaGTCCTTCCAGCAGAGTTAC +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCPIIKY*SFQQSY
Trigger: GTAACTCTGCTGGAAGGACCAATATTTGATTATGGG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGTGGAGGTCCACCTGTTaGATGCTCTATGTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KIYFISSSSEISGKKEKGWRSTC*MLYVSL
Trigger: CAGGGAAACATAGAGCATCCAACAGGTGGACCTCCA...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGAATAGAATCCCGAGCCTaGTCAGAGCTGTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: EKGNIGIYLFREPRKFSRIESRA*SELSSR
Trigger: TCTGGATGACAGCTCTGACCAGGCTCGGGATTCTAT...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp GTCTTCTATGACAAGCTTGCTGGTTTCTTCCAGAGATTTCTGGTAGGCTGTGAGTGTATAACACTTTCTTaGAGGGAGATTTTACACTCA +
Preference number: 4 (lower is better)
Translates to: VFYDKLAGFFQRFLVGCECITLS*REILHS
Trigger: TGAGTGTAAAATCTCCCTCCAAGAAAGTGTTATACA...CTCACAGCCTACCAGAAATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATCACTTCCTCTGAACTaGGAGTTTCCGGGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILSLPLN*EFPGSK
Trigger: CTTTGACCCCGGAAACTCCCAGTTCAGAGGAAGTGA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTCTTATTGCTCAGGTTaGCATTCGCGTTTCTACTCA +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFSYCSG*HSRFYS
Trigger: TGAGTAGAAACGCGAATGTCAACCTGAGCAATAAGA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR TCA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATATCAGCCTCATCATCTTaGTCTGACTCTGTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKISASSS*SDSVSF
Trigger: AAAGGAGACAGAGTCAGATCAAGATGATGAGGCTGA...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182207.8
CDS-3UTR GCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTGGGACATTCATTTTGTaGTTCTCCGTGATGGTAGTG +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGGTFIL*FSVMVV
Trigger: CACTACCATCACGGAGAAGCACAAAATGAATGTCCC...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATAATTGGGCTAAATGTTaGTTTGTTCCCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDNWAKC*FVPKDF
Trigger: AAAATCCTTGGGAACAAAGCAACATTTAGCCCAATT...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACAGAATCGTCCATTTTaGTGTCTTCTAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLQNRPF*CLLKKC
Trigger: ACACTTCTTTAGAAGACAGCAAAATGGACGATTCTG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAGTAGGGTTTTGCCTTTaGTTCTGGAATGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILVGFCL*FWNDFR
Trigger: GCGGAAGTCATTCCAGAAGCAAAGGCAAAACCCTAC...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGACGGGAAGTAGGGTTTTaGCTTTGCTTCTGGAATGAC +
Preference number: 4 (lower is better)
Translates to: RFISFHLPVRFQERRRKGREVGF*LCFWND
Trigger: GTCATTCCAGAAGCAAAGGCAAAACCCTACTTCCCG...TCCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTCACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAACACACAGGGTTTAGGTaGGTCTTCTATGACAAGCTT +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEHTGFR*VFYDKL
Trigger: AAGCTTGTCATAGAAGACGCACCTAAACCCTGTGTG...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGATGGTCATCTTTTTCATaGCGACAGGCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: RFISFHLPVRFQERRRKGWSSFS*RQAHRV
Trigger: AACCCTGTGTGCCTGTCGGCATGAAAAAGATGACCA...TCCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAGAGTCTTCAACCTGTTaGTCAGGAAAGAAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILESSTC*SGKKSG
Trigger: GCCTGACTTCTTTCCTGAGCAACAGGTTGAAGACTC...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCCACAAAATCTCTCTTaGTCATGTCAATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFPQNLS*SCQLHH
Trigger: GTGGTGCAATTGACATGAGCAAGAGAGATTTTGTGG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp CGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAATTCTTTGGAAGCAAGATaGAGTGCATTCAATCCATTC +
Preference number: 4 (lower is better)
Translates to: RVDLSLKHWASSTTTNTNSLEAR*SAFNPF
Trigger: GAATGGATTGAATGCACTCCATCTTGCTTCCAAAGA...ATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTGCGACAATCCATTCTTaGTTTTTGAAAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGATIHS*FLKGWG
Trigger: CCCCCATCCTTTCAAAAACCAAGAATGGATTGTCGC...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp GGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: GEREYRNILIPRTQKILKVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...CTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTAT +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAVLLFG*YQKFLY
Trigger: ATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCAC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGTCAGGTGCTGCTCTTTaGATGGTACCAGAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KIYFISSSSEISGKKEKGSGAAL*MVPEVP
Trigger: AGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGA...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGATCTCCTTCCCCCTCATaGACCCAAAATGAGGGATTT +
Preference number: 4 (lower is better)
Translates to: EKGNIGIYLFREPRKFSRSPSPS*TQNEGF
Trigger: AAATCCCTCATTTTGGGTCCATGAGGGGGAAGGAGA...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATATCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKISLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACTCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: YLFREPRKFSRFLSLAADSLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp GGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGTTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GEREYRNILIPRTQKILKFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...CTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
3UTR CAA 72 bp TTTTGTCTGTCTTCTTTGAAAATGACACTAAATTACTaGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FCLSSLKMTLNY*RPGLKNMASCV
Trigger: GACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAAGACAGACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR CAA 72 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTaGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAAT +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVS*GPRKIRRAVVN
Trigger: ATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182665.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAGTTTCAGGTTCTCCTTaGTGCTCTGTTTCCCTATAT +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIVSGSP*CSVSLY
Trigger: ATATAGGGAAACAGAGCATCAAGGAGAACCTGAAAC...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AGACATCATGCAAATGACATGCAAATGTACTCTCTGCCTCTTTGTTTATTGAAAACCTTCTTCACCGTCTaGGATATATTCCCCATCACT +
Preference number: 4 (lower is better)
Translates to: RHHANDMQMYSLPLCLLKTFFTV*DIFPIT
Trigger: AGTGATGGGGAATATATCTCAGACGGTGAAGAAGGT...TTTCAATAAACAAAGAGGCAGAGAGTACATTTGCATGTCATTTGCATGATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR GCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAAATTGGGCTAAATGTTaGTTTGTTCCCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLNWAKC*FVPKDF
Trigger: AAAATCCTTGGGAACAAAGCAACATTTAGCCCAATT...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATATGTTTCCTTTCTTTGTaGCGGCATCAACATTGGCTT +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKICFLSL*RHQHWL
Trigger: AAGCCAATGTTGATGCCGCCACAAAGAAAGGAAACA...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CTTCATCTACTACGACAAATACTAATCCATACACACATCCAGTACTCTTTTCCATGTTTCCTTTCTTTGTaGCGGCATCAACATTGGCTT +
Preference number: 4 (lower is better)
Translates to: LHLLRQILIHTHIQYSFPCFLSL*RHQHWL
Trigger: AAGCCAATGTTGATGCCGCCACAAAGAAAGGAAACA...TGGAAAAGAGTACTGGATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAGGCTGCCATATACAATaGTGTGAAGCCATTCTGAGA +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILGCHIQ*CEAILR
Trigger: TCTCAGAATGGCTTCACACCATTGTATATGGCAGCC...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp CCCATAGGACAGGCAATAACAGCCTTGAATGACATTAAGCATTCATTAATACTATATCCAAAAGAACCTTaGCAACTTTGTAATGGCCGC +
Preference number: 4 (lower is better)
Translates to: PIGQAITALNDIKHSLILYPKEP*QLCNGR
Trigger: GCGGCCATTACAAAGTTGCCAAGGTTCTTTTGGATA...TAGTATTAATGAATGCTTAATGTCATTCAAGGCTGTTATTGCCTGTCCTATGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTATCCAAAAGAACCTTaGCAACTTTGTAATGGCCGC +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGYPKEP*QLCNGR
Trigger: GCGGCCATTACAAAGTTGCCAAGGTTCTTTTGGATA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CCA 90 bp TTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGTAACCACGGCAAAATACTaGGGGAAATCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: LFREPRKFSRFLSLAADVTTAKY*GKSFVI
Trigger: TATCACAAAGGATTTCCCCCAGTATTTTGCCGTGGT...TACGTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTCTACCGTGACAATTaGGCTAAATGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFLYRDN*AKCCFV
Trigger: AACAAAGCAACATTTAGCCCAATTGTCACGGTAGAG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGCAATGTCTTTGCTTCTaGCAACCTCCTCGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: KIYFISSSSEISGKKEKGQCLCF*QPPRSS
Trigger: AGAACTTCGAGGAGGTTGCCAGAAGCAAAGACATTG...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATCCCTTTGTTGTCTTTaGCTCCTTCAGGAAAGACAG +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILSLCCL*LLQERQ
Trigger: CTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCATCTGCAAAGCTTCTaGTGCCTGAAATATTCCCAT +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAHLQSF*CLKYSH
Trigger: ATGGGAATATTTCAGGCACCAGAAGCTTTGCAGATG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AGACATCATGCAAATGACATGCAAATGTACTCTCTGCCTCTTTGTTTATTGAAATTTTGCCTTTGCTTCTaGAATGACTTCCGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RHHANDMQMYSLPLCLLKFCLCF*NDFRCV
Trigger: CACACAGCGGAAGTCATTCCAGAAGCAAAGGCAAAA...TTTCAATAAACAAAGAGGCAGAGAGTACATTTGCATGTCATTTGCATGATGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFTSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGAGGTGGTGGGTTTTaGTTCCAACTCCATAAAAGT +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIRGGGF*FQLHKS
Trigger: ACTTTTATGGAGTTGGAACCAAAACCCACCACCTCT...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATTTACACCTCCTGGTTaGAGCTCCTTTTCGTACTGT +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILFTPPG*SSFSYC
Trigger: ACAGTACGAAAAGGAGCTCCAACCAGGAGGTGTAAA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTCCAAACATCCTTCTTaGTGTCTATGGTCTGACTTG +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAASKHPS*CLWSDL
Trigger: CAAGTCAGACCATAGACACCAAGAAGGATGTTTGGA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR TCA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACTTTTTACTGTCAAACTaGTGTTCCTTCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: YLFREPRKFSRFLSLAADFLLSN*CSFQVS
Trigger: AGAGACCTGGAAGGAACATCAGTTTGACAGTAAAAA...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTTTTTACTGTCAAACTaGTGTTCCTTCCAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGFLLSN*CSFQVS
Trigger: AGAGACCTGGAAGGAACATCAGTTTGACAGTAAAAA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGACCTCAAACAGAGATTTaGCCTTGTCTTCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: EKGNIGIYLFREPRKFSRPQTEI*PCLLSL
Trigger: AAGTGACAGAAGACAAGGTCAAATCTCTGTTTGAGG...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTATAAAAGCTATGAGTaGGTCTGGTGTCTTAGATGT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFYKSYE*VWCLRC
Trigger: ACATCTAAGACACCAGACTCACTCATAGCTTTTATA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR GCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTCTTGGCATTAACTTTTaGAGAATGCTGCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGLGINF*RMLQQK
Trigger: TTTCTGCTGCAGCATTCTGCAAAAGTTAATGCCAAG...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGTAAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LFREPRKFSRFLSLAADVKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...TACGTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR GCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATACTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKILQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGCTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: GEREYRNILIPRTQKILKLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...CTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAACCACGGCAAAATACTaGGGGAAATCCTTTGTGATA +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILTTAKY*GKSFVI
Trigger: TATCACAAAGGATTTCCCCCAGTATTTTGCCGTGGT...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCCTCTACCGTGACAATTaGGCTAAATGTTGCTTTGTT +
Preference number: 4 (lower is better)
Translates to: EGEREYRNILIPRTQKILLYRDN*AKCCFV
Trigger: AACAAAGCAACATTTAGCCCAATTGTCACGGTAGAG...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp GGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGCCCATAATCAAATATTaGTCCTTCCAGCAGAGTTAC +
Preference number: 4 (lower is better)
Translates to: GEREYRNILIPRTQKILKPIIKY*SFQQSY
Trigger: GTAACTCTGCTGGAAGGACCAATATTTGATTATGGG...CTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: KERNSVYTLTVSLGPRKITSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAAACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLETSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp ACTACGACAAATACTAATCCATACACACATCCAGTACTCTTTTCCAATCAAGACTTAAGTAACTTGCGTTaGCATCAGATTCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TTTNTNPYTHPVLFSNQDLSNLR*HQILLG
Trigger: TCCCAGAAGAATCTGATGCCAACGCAAGTTACTTAA...GTCTTGATTGGAAAAGAGTACTGGATGTGTGTATGGATTAGTATTTGTCGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR TCA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGAGTTGATTTCATCCACTaGAAAATTCAGTTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: EKGNIGIYLFREPRKFSRVDFIH*KIQFPC
Trigger: GCAAGGGAACTGAATTTTTCAGTGGATGAAATCAAC...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: YLFREPRKFSRFLSLAADPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTCCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACTTGGCATTAACTTTTaGAGAATGCTGCAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILLGINF*RMLQQK
Trigger: TTTCTGCTGCAGCATTCTGCAAAAGTTAATGCCAAG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR GCA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCAATTGGGCTAAATGTTaGTTTGTTCCCAAGGATTTT +
Preference number: 4 (lower is better)
Translates to: FFENDTKLLETGSEEHGFNWAKC*FVPKDF
Trigger: AAAATCCTTGGGAACAAAGCAACATTTAGCCCAATT...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAAAGTTAAAAACAAGCTaGTGTCCTCCTTTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILKLKTS*CPPLVR
Trigger: TCTGACCAAAGGAGGACAGCAGCTTGTTTTTAACTT...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACTGCAAAGCTTCTGGTaGCTGAAATATTCCCATAAT +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILLQSFW*LKYSHN
Trigger: ATTATGGGAATATTTCAGGCACCAGAAGCTTTGCAG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR GCA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACCAGAATCGTCCATTTTaGTGTCTTCTAAAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: YLFREPRKFSRFLSLAADQNRPF*CLLKKC
Trigger: ACACTTCTTTAGAAGACAGCAAAATGGACGATTCTG...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGACATCCGTGTGTTTTTaGTTTCAGGTTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: KIYFISSSSEISGKKEKGTSVCF*FQVLLD
Trigger: ATCAAGGAGAACCTGAAACCAAAAACACACGGATGT...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACCACACGTATTTGGTTaGTTTCATCCACTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILPHVFG*FHPLKN
Trigger: ATTTTTCAGTGGATGAAATCAACCAAATACGTGTGG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR TCA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGAAAAGCTTCTGGTGCCTaGAATATTCCCATAATCAAA +
Preference number: 4 (lower is better)
Translates to: EKGNIGIYLFREPRKFSRKASGA*NIPIIK
Trigger: TTTGATTATGGGAATATTTCAGGCACCAGAAGCTTT...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR TCA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGTCTACTTCTTCAAGTTaGATGTCCTCAAACAGAGAT +
Preference number: 4 (lower is better)
Translates to: KIYFISSSSEISGKKEKGSTSSS*MSSNRD
Trigger: ATCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGA...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGATCTTGATGGAAAATaGCAGTCTGTTTTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: YLFREPRKFSRFLSLAADDLDGK*QSVFFE
Trigger: TTCAAAGAAAACAGACTGCCATTTTCCATCAAGATC...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CCA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAATTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CCA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTTTTCCACACGTATTTaGTTGATTTCATCCACTGAA +
Preference number: 4 (lower is better)
Translates to: FTELQNSSFGELFKFAAGFSTRI*LISSTE
Trigger: TTCAGTGGATGAAATCAACCAAATACGTGTGGAAAA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
3UTR CAA 72 bp GGAATGTATTTAGAAGAAAAATGTTATAGTGTGGACTaGAAGTTTAGGATGGTGAGAGATACCACCCCTAAT +
Preference number: 4 (lower is better)
Translates to: GMYLEEKCYSVD*KFRMVRDTTPN
Trigger: ATTAGGGGTGGTATCTCTCACCATCCTAAACTTCAAGTCCACACTATAACATTTTTCTTCTAAATACATTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
3UTR CAA 72 bp GAGAATATTCATCCCATAGGACAGGCAATAACAGCCTaGAATGACATTAAGCATTCATTAATACTATATGGG +
Preference number: 4 (lower is better)
Translates to: ENIHPIGQAITA*NDIKHSLILYG
Trigger: CCCATATAGTATTAATGAATGCTTAATGTCATTCAAGGCTGTTATTGCCTGTCCTATGGGATGAATATTCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS CCA 90 bp TGCAGAGGAGCCGCAGGTTGGGCGTGGCATCCCCCTTGTACCCATTaGACACGCCTTCTCCCGAGGGCGGGGGCACCGGAATGGTCATGG +
Preference number: 5 (lower is better)
Translates to: CRGAAGWAWHPPCTH*TRLLPRAGAPEWSW
Trigger: CCATGACCATTCCGGTGCCCCCGCCCTCGGGAGAAGGCGTGTCCAATGGGTACAAGGGGGATGCCACGCCCAACCTGCGGCTCCTCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CCA 90 bp GTGGGGGCCGTACACTTTCGCGGAGGGATGATGATCCGCATCCCGTaGTGGCGGCTTCCTCGCATGGAGCCCCCTCTCGCGTCCACCATA +
Preference number: 5 (lower is better)
Translates to: VGAVHFRGGMMIRIP*WRLPRMEPPLASTI
Trigger: TATGGTGGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCCACCACGGGATGCGGATCATCATCCCTCCGCGAAAGTGTACGGCCCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 23 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS TCA 90 bp TGGCCTCGGCACCGGGAGGGACTGGTGATGGGGGTTGCACTCGGATaGCTGGCTCGGCCAACTGGTACTTGTCAGACTCGTCCTGAAGGC +
Preference number: 5 (lower is better)
Translates to: WPRHREGLVMGVALG*LARPTGTCQTRPEG
Trigger: GCCTTCAGGACGAGTCTGACAAGTACCAGTTGGCCGAGCCAGTCATCCGAGTGCAACCCCCATCACCAGTCCCTCCCGGTGCCGAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS GCA 90 bp CTGGAGTCACTGGCCTCGGCACCGGGAGGGACTGGTGATGGGGGTTaGACTCGGATGACTGGCTCGGCCAACTGGTACTTGTCAGACTCG +
Preference number: 5 (lower is better)
Translates to: LESLASAPGGTGDGG*TRMTGSANWYLSDS
Trigger: CGAGTCTGACAAGTACCAGTTGGCCGAGCCAGTCATCCGAGTGCAACCCCCATCACCAGTCCCTCCCGGTGCCGAGGCCAGTGACTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS TCA 90 bp CTCATCATCGCTGGAGTCACTGGCCTCGGCACCGGGAGGGACTGGTaGTGGGGGTTGCACTCGGATGACTGGCTCGGCCAACTGGTACTT +
Preference number: 5 (lower is better)
Translates to: LIIAGVTGLGTGRDW*WGLHSDDWLGQLVL
Trigger: AAGTACCAGTTGGCCGAGCCAGTCATCCGAGTGCAACCCCCATCACCAGTCCCTCCCGGTGCCGAGGCCAGTGACTCCAGCGATGATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS GCA 90 bp TCCACGTGCCCTTCCTGTGCCGCAAGATGGACGGACGCAATCCCTTaGCGGGTAACCGCGTTTGCATCAGCACCGTACTCCAGCAGGGAC +
Preference number: 5 (lower is better)
Translates to: STCPSCAARWTDAIP*RVTAFASAPYSSRD
Trigger: GTCCCTGCTGGAGTACGGTGCTGATGCAAACGCGGTTACCCGGCAAGGGATTGCGTCCGTCCATCTTGCGGCACAGGAAGGGCACGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS TCA 90 bp GCAGCTGCCGACTTCTCCAGAGAGCCACTACAGGCTGTGCCTTCCTaGCACTCTCCGTTGCTCGGGATGCTGGGGTTGGGGTCGACTGAA +
Preference number: 5 (lower is better)
Translates to: AAADFSREPLQAVPS*HSPLLGMLGLGSTE
Trigger: TTCAGTCGACCCCAACCCCAGCATCCCGAGCAACGGAGAGTGTCAGGAAGGCACAGCCTGTAGTGGCTCTCTGGAGAAGTCGGCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 90 bp CAGCAGGCGGTCATCCGCGTAAACGCTTCGCCCGGGCTTTTGACCTaGTTAGGCTCTGACCTGGTGGACCCCTCTTCTTCCTGGAGGTTG +
Preference number: 5 (lower is better)
Translates to: QQAVIRVNASPGLLT*LGSDLVDPSSSWRL
Trigger: CAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGTCAAAAGCCCGGGCGAAGCGTTTACGCGGATGACCGCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183169.8
CDS GCA 90 bp CTGTTGGGTAGGGACCCTGTTCTCAGGGCTGTTGGACCTACTGGGTaGCTTCCTGTCCTCAGCCTGAGGGACACTTTGTCCATCCGGGCC +
Preference number: 5 (lower is better)
Translates to: LLGRDPVLRAVGPTG*LPVLSLRDTLSIRA
Trigger: GGCCCGGATGGACAAAGTGTCCCTCAGGCTGAGGACAGGAAGGCACCCAGTAGGTCCAACAGCCCTGAGAACAGGGTCCCTACCCAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 90 bp AGAGCCACGGCCAATGGCGTGAAGCCGTCCTCTGTGGCCAGGCTTTaGCTGGCGCCATTGTCCAGAAGAAACCTGACGACTTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RATANGVKPSSVARL*LAPLSRRNLTTSRW
Trigger: CCACCTGGAAGTCGTCAGGTTTCTTCTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAGGACGGCTTCACGCCATTGGCCGTGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS TCA 90 bp ACACGACTTGGTCATGACCTTGTTGCAGAGCCACGGCCAATGGCGTaGAGCCGTCCTCTGTGGCCAGGCTTTGGCTGGCGCCATTGTCCA +
Preference number: 5 (lower is better)
Translates to: TRLGHDLVAEPRPMA*SRPLWPGFGWRHCP
Trigger: TGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAGGACGGCTTCACGCCATTGGCCGTGGCTCTGCAACAAGGTCATGACCAAGTCGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS TCA 90 bp GCCCCCTGGTTGACAAGGACCTCGGCCACATTCACTCGGTCTTCTTaGGCAGCCAGGTGGAGTGGGGTGAGACCGCTCTTATTGCTCAGG +
Preference number: 5 (lower is better)
Translates to: APWLTRTSATFTRSS*AARWSGVRPLLLLR
Trigger: CCTGAGCAATAAGAGCGGTCTCACCCCACTCCACCTGGCTGCTCAAGAAGACCGAGTGAATGTGGCCGAGGTCCTTGTCAACCAGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 90 bp TGCCGCAAGATGGACGGACGCAATCCCTTGCCGGGTAACCGCGTTTaGATCAGCACCGTACTCCAGCAGGGACGTGGCTATGTCCATCTG +
Preference number: 5 (lower is better)
Translates to: CRKMDGRNPLPGNRV*ISTVLQQGRGYVHL
Trigger: CAGATGGACATAGCCACGTCCCTGCTGGAGTACGGTGCTGATGCAAACGCGGTTACCCGGCAAGGGATTGCGTCCGTCCATCTTGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 90 bp GTTTCTACTCAGGAGCAGCGACACCATGTCCACGTGCCCTTCCTGTaGCGCAAGATGGACGGACGCAATCCCTTGCCGGGTAACCGCGTT +
Preference number: 5 (lower is better)
Translates to: VSTQEQRHHVHVPFL*RKMDGRNPLPGNRV
Trigger: AACGCGGTTACCCGGCAAGGGATTGCGTCCGTCCATCTTGCGGCACAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTGAGTAGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 90 bp AGGATGGGGGCGGATCTGTCAAGCAACATCTCTACCACCTGCTCATaGCCACTTCTCGCCCCACAGTGCAACGGAGTCAGACCGTCCCTG +
Preference number: 5 (lower is better)
Translates to: RMGADLSSNISTTCS*PLLAPQCNGVRPSL
Trigger: CAGGGACGGTCTGACTCCGTTGCACTGTGGGGCGAGAAGTGGCCATGAGCAGGTGGTAGAGATGTTGCTTGACAGATCCGCCCCCATCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTCTGTGGCCAGGCTTaGGCTGGCGCCATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCLCGQA*AGAIVQ
Trigger: CTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAG...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCTCTGTGGCCAGGCTTaGGCTGGCGCCATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTLCGQA*AGAIVQ
Trigger: CTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTACCTGAGCCCCATCTaGGACCAGATACCGCACCAC +
Preference number: 5 (lower is better)
Translates to: ERWIPILVQGEVTWDACPYLSPI*DQIPHH
Trigger: GTGGTGCGGTATCTGGTCCAAGATGGGGCTCAGGTA...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: ERWIPILVQGEVTWDACPSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGAGCCCTGCCAGCTCTTaGGAAGGGTCTCGCCCGGAC +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVSPASS*EGSRPD
Trigger: GTCCGGGCGAGACCCTTCCAAAGAGCTGGCAGGGCT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CAA 90 bp CCAGTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGCTTAGTGGGGCTGATTaGGGCTCCTCCTCCTCCGAC +
Preference number: 5 (lower is better)
Translates to: PVSLRACAGDSRLPLGVSLSGAD*GSSSSD
Trigger: GTCGGAGGAGGAGGAGCCCAAATCAGCCCCACTAAG...CGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS TCA 90 bp CATCCGCGTAAACGCTTCGCCCGGGCTTTTGACCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTCTTCCTGGAGGTTGAGCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: HPRKRFARAFDLLRL*PGGPLFFLEVEPGF
Trigger: AAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGTCAAAAGCCCGGGCGAAGCGTTTACGCGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183169.8
CDS GCA 90 bp GGAGTTAGCCCGCTCTTCCCTGCGGCATCGGGAGACGCACTCTTCTaGAGCAGGAGACTTGCGACTTCAAGCTTTCCGTATTTGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GVSPLFPAASGDALF*SRRLATSSFPYLAA
Trigger: GGCAGCCAAATACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAGAAGAGTGCGTCTCCCGATGCCGCAGGGAAGAGCGGGCTAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 90 bp TTGACATTCGCGTTTCTACTCAGGAGCAGCGACACCATGTCCACGTaGCCTTCCTGTGCCGCAAGATGGACGGACGCAATCCCTTGCCGG +
Preference number: 5 (lower is better)
Translates to: LTFAFLLRSSDTMST*PSCAARWTDAIPCR
Trigger: CCGGCAAGGGATTGCGTCCGTCCATCTTGCGGCACAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTGAGTAGAAACGCGAATGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 90 bp GGTAGTAGCAGCTATCGAGGACCCGAGGGAGGTGTACAGTGCACTTaGAGAGGGAGTTCTAAGGGACTGGAAAGCCGAGGGGGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: GSSSYRGPEGGVQCT*RGSSKGLESRGGCR
Trigger: TCTGCAGCCCCCTCGGCTTTCCAGTCCCTTAGAACTCCCTCTGCAAGTGCACTGTACACCTCCCTCGGGTCCTCGATAGCTGCTACTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 90 bp TCTCCAGAGAGCCACTACAGGCTGTGCCTTCCTGACACTCTCCGTTaGTCGGGATGCTGGGGTTGGGGTCGACTGAAGGTGCCACTACAT +
Preference number: 5 (lower is better)
Translates to: SPESHYRLCLPDTLR*SGCWGWGRLKVPLH
Trigger: ATGTAGTGGCACCTTCAGTCGACCCCAACCCCAGCATCCCGAGCAACGGAGAGTGTCAGGAAGGCACAGCCTGTAGTGGCTCTCTGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 90 bp GATCTGTTTCCTTCTCCACGGTCACCTGCCTTAGTGGGGCTGATTTaGGCTCCTCCTCCTCCGACTCCTCTGAAACCTCGGGAATCGGGC +
Preference number: 5 (lower is better)
Translates to: DLFPSPRSPALVGLI*APPPPTPLKPRESG
Trigger: GCCCGATTCCCGAGGTTTCAGAGGAGTCGGAGGAGGAGGAGCCCAAATCAGCCCCACTAAGGCAGGTGACCGTGGAGAAGGAAACAGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 90 bp GGGCTTTTGACCTTAGGCTCTGACCTGGTGGACCCCTCTTCTTCCTaGAGGTTGAGCCTGGCTTTGCCGTCAGCCGTAGTCCTGGTCATC +
Preference number: 5 (lower is better)
Translates to: GLLTLGSDLVDPSSS*RLSLALPSAVVLVI
Trigger: GATGACCAGGACTACGGCTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGGTCAAAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182269.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTGTCTCTCCTCTCACATaGGTGGTGTTTGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: ERWIPILVQGEVTWDACPVSPLT*VVFGEA
Trigger: AGCCTCCCCAAACACCACCAATGTGAGAGGAGAGAC...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCGGGTGTACCCAGAAGTaGTTGCTGCATTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVGCTQK*LLHWGM
Trigger: CATCCCCCAATGCAGCAACAACTTCTGGGTACACCC...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTATTTCTAGCAGACTTCGTGGTAACTGAAGGCTGGCCGCCCCGGGAAGTCTCGAACTGGGCCCCTGACTaGGGATCGGCCTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LFLADFVVTEGWPPREVSNWAPD*GSAFSG
Trigger: CCCAGAGAAGGCCGATCCCAAGTCAGGGGCCCAGTT...CGAGACTTCCCGGGGCGGCCAGCCTTCAGTTACCACGAAGTCTGCTAGAAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTGCTTCGCCCGGGCTTTaGACCTGCTTAGGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCASPGL*TCLGSD
Trigger: GTCAGAGCCTAAGCAGGTCAAAAGCCCGGGCGAAGC...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183169.8
CDS TCA 90 bp GGGTGTAGCCCATCTTTGTCTGAGCATCCACATGGGCCCCCTGGTTaGCAAGGACCTCGGCCACATTCACTCGGTCTTCTTGAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: GCSPSLSEHPHGPPG*QGPRPHSLGLLEQP
Trigger: TGGCTGCTCAAGAAGACCGAGTGAATGTGGCCGAGGTCCTTGTCAACCAGGGGGCCCATGTGGATGCTCAGACAAAGATGGGCTACACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS TCA 90 bp GCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTTCTGCCAACTCTaGCACAGGTCCTTCAACTGGCTCTCATCTACGTCCAGTGGGTCG +
Preference number: 5 (lower is better)
Translates to: AGDSRLPLGVSFCQL*HRSFNWLSSTSSGS
Trigger: CGACCCACTGGACGTAGATGAGAGCCAGTTGAAGGACCTGTGTCAGAGTTGGCAGAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182207.8
ENSMUST00000182692.8
CDS TCA 90 bp AGAAAGTTGAGTTGGGAGCCAGCCCCTTTATGGGTGTGGCCTCTGTaGTGGTGGGAACCCTCCCAAGGGTACCAGAGGCAACCTGGGGAT +
Preference number: 5 (lower is better)
Translates to: RKLSWEPAPLWVWPL*WWEPSQGYQRQPGD
Trigger: ATCCCCAGGTTGCCTCTGGTACCCTTGGGAGGGTTCCCACCATCACAGAGGCCACACCCATAAAGGGGCTGGCTCCCAACTCAACTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 90 bp AGCAACATCTCTACCACCTGCTCATGGCCACTTCTCGCCCCACAGTaGAACGGAGTCAGACCGTCCCTGGTCTTGGCATCGATCTTCGCA +
Preference number: 5 (lower is better)
Translates to: SNISTTCSWPLLAPQ*NGVRPSLVLASIFA
Trigger: TGCGAAGATCGATGCCAAGACCAGGGACGGTCTGACTCCGTTGCACTGTGGGGCGAGAAGTGGCCATGAGCAGGTGGTAGAGATGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 90 bp ATACCGCACCACTTCTGCTTGTCCGGACCGAGCCGCCATATGCAATaGCGTCTCTCCTCTCACATTGGTGGTGTTTGGGGAGGCTCCATG +
Preference number: 5 (lower is better)
Translates to: IPHHFCLSGPSRHMQ*RLSSHIGGVWGGSM
Trigger: CATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGACGGCATTGCATATGGCGGCTCGGTCCGGACAAGCAGAAGTGGTGCGGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 90 bp ACCAGATACCGCACCACTTCTGCTTGTCCGGACCGAGCCGCCATATaGAATGCCGTCTCTCCTCTCACATTGGTGGTGTTTGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: TRYRTTSACPDRAAI*NAVSPLTLVVFGEA
Trigger: AGCCTCCCCAAACACCACCAATGTGAGAGGAGAGACGGCATTGCATATGGCGGCTCGGTCCGGACAAGCAGAAGTGGTGCGGTATCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 90 bp TGCTTCTACCTGAGCCCCATCTTGGACCAGATACCGCACCACTTCTaGTTGTCCGGACCGAGCCGCCATATGCAATGCCGTCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: CFYLSPILDQIPHHF*LSGPSRHMQCRLSS
Trigger: AGAGGAGAGACGGCATTGCATATGGCGGCTCGGTCCGGACAAGCAGAAGTGGTGCGGTATCTGGTCCAAGATGGGGCTCAGGTAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 90 bp AGCCACTACAGGCTGTGCCTTCCTGACACTCTCCGTTGCTCGGGATaGTGGGGTTGGGGTCGACTGAAGGTGCCACTACATCTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: SHYRLCLPDTLRCSG*WGWGRLKVPLHLSL
Trigger: TAGAGAGAGATGTAGTGGCACCTTCAGTCGACCCCAACCCCAGCATCCCGAGCAACGGAGAGTGTCAGGAAGGCACAGCCTGTAGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 90 bp CACTTCTCGCCCCACAGTGCAACGGAGTCAGACCGTCCCTGGTCTTaGCATCGATCTTCGCACCCCGGTCCAGCAATAGCTTCACCATAT +
Preference number: 5 (lower is better)
Translates to: HFSPHSATESDRPWS*HRSSHPGPAIASPY
Trigger: ATATGGTGAAGCTATTGCTGGACCGGGGTGCGAAGATCGATGCCAAGACCAGGGACGGTCTGACTCCGTTGCACTGTGGGGCGAGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 90 bp TCGTTGGTGACGTCGTCCACGGGCACGTTGTGCTGGAGGAGGAGTTaGACGCAGTTTAAATGGTCTCCTTGTGTGGCCATGTGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SLVTSSTGTLCWRRS*TQFKWSPCVAMCSG
Trigger: GCCACTGCACATGGCCACACAAGGAGACCATTTAAACTGCGTCCAACTCCTCCTCCAGCACAACGTGCCCGTGGACGACGTCACCAACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 90 bp GCGGTTACCACTGGAGGTCCACCTGTTGGATGCTCTATGTTTCCCTaGGAAGGCACCAGCCCGTCACTCAGTCTACTGGGGGTCCTAAAG +
Preference number: 5 (lower is better)
Translates to: AVTTGGPPVGCSMFP*EGTSPSLSLLGVLK
Trigger: CTTTAGGACCCCCAGTAGACTGAGTGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCATCCAACAGGTGGACCTCCAGTGGTAACCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CCA 90 bp GGCTGTCCTTCTCTGCGTGCTGGGCTGAGGTCTCAGCAGCAGACTTaGCAACATCTGGAGACATGGCCGACTTGTGTTCAAACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GCPSLRAGLRSQQQT*QHLETWPTCVQTAL
Trigger: CAGGGCTGTTTGAACACAAGTCGGCCATGTCTCCAGATGTTGCCAAGTCTGCTGCTGAGACCTCAGCCCAGCACGCAGAGAAGGACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS CCA 90 bp CTTTTGACCTGCTTAGGCTCTGACCTGGTGGACCCCTCTTCTTCCTaGAGGTTGAGCCTGGCTTTGCCGTCAGCCGTAGTCCTGGTCATC +
Preference number: 5 (lower is better)
Translates to: LLTCLGSDLVDPSSS*RLSLALPSAVVLVI
Trigger: GATGACCAGGACTACGGCTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGTCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183169.8
CDS CCA 90 bp GCCTCTGTGATGGTGGGAACCCTCCCAAGGGTACCAGAGGCAACCTaGGGATTGTACGGAGACGGCGACACCACCGTTTTTATTGGCGAA +
Preference number: 5 (lower is better)
Translates to: ASVMVGTLPRVPEAT*GLYGDGDTTVFIGE
Trigger: TTCGCCAATAAAAACGGTGGTGTCGCCGTCTCCGTACAATCCCCAGGTTGCCTCTGGTACCCTTGGGAGGGTTCCCACCATCACAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 90 bp AAGGGACTGGAAAGCCGAGGGGGCTGCAGAAACATACGACCTGAGTaGGGAAAAGGGCATGGCTGTCGTGGTAGAGAGCGCTTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: KGLESRGGCRNIRPE*GKGHGCRGRERFLH
Trigger: GTGGAGAAAGCGCTCTCTACCACGACAGCCATGCCCTTTTCCCCACTCAGGTCGTATGTTTCTGCAGCCCCCTCGGCTTTCCAGTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 90 bp CCGAGGGAGGTGTACAGTGCACTTGCAGAGGGAGTTCTAAGGGACTaGAAAGCCGAGGGGGCTGCAGAAACATACGACCTGAGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: PREVYSALAEGVLRD*KAEGAAETYDLSGE
Trigger: TTCCCCACTCAGGTCGTATGTTTCTGCAGCCCCCTCGGCTTTCCAGTCCCTTAGAACTCCCTCTGCAAGTGCACTGTACACCTCCCTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTTCGTAACCAAGACCTaGACCACTTCCGCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: ERWIPILVQGEVTWDACPFVTKT*TTSACP
Trigger: TGGGCAAGCGGAAGTGGTCAAGGTCTTGGTTACGAA...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTCTGCAGCAGGAGACTaGCGACTTCAAGCTTTCCGT +
Preference number: 5 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVSAAGD*RLQAFR
Trigger: ACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAGA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVSSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTCCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCTATCCGAACTTATCTaGGGACTGGCAGAACGGGCT +
Preference number: 5 (lower is better)
Translates to: ERWIPILVQGEVTWDACPLSELI*GLAERA
Trigger: AGCCCGTTCTGCCAGTCCCAAGATAAGTTCGGATAG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS TCA 90 bp CCTCTGTGGCCAGGCTTTGGCTGGCGCCATTGTCCAGAAGAAACCTaGCGACTTCCAGGTGGTTCTCCTGGGCTGCCATATACAATGGTG +
Preference number: 5 (lower is better)
Translates to: PLWPGFGWRHCPEET*RLPGGSPGLPYTMV
Trigger: CACCATTGTATATGGCAGCCCAGGAGAACCACCTGGAAGTCGTCAGGTTTCTTCTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS TCA 90 bp AGCTCTCTGTACAGCTGGGAGGCTAGCCCTACGGTCTCTAACACCTaGTGGCAGTCCGCCAGCCAGAATCTGGCTGAAACGTTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: SSLYSWEASPTVSNT*WQSASQNLAETLVV
Trigger: CACAACCAACGTTTCAGCCAGATTCTGGCTGGCGGACTGCCATCAGGTGTTAGAGACCGTAGGGCTAGCCTCCCAGCTGTACAGAGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS TCA 90 bp CAGAGACCCTGCGGTCGTCACAGGAGAAGTTCGAGAGGAGAAAGTTaGGTTGGGAGCCAGCCCCTTTATGGGTGTGGCCTCTGTGATGGT +
Preference number: 5 (lower is better)
Translates to: QRPCGRHRRSSRGES*VGSQPLYGCGLCDG
Trigger: ACCATCACAGAGGCCACACCCATAAAGGGGCTGGCTCCCAACTCAACTTTCTCCTCTCGAACTTCTCCTGTGACGACCGCAGGGTCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 90 bp TTTGAAAGGATGGGGGCGGATCTGTCAAGCAACATCTCTACCACCTaGTCATGGCCACTTCTCGCCCCACAGTGCAACGGAGTCAGACCG +
Preference number: 5 (lower is better)
Translates to: FERMGADLSSNISTT*SWPLLAPQCNGVRP
Trigger: CGGTCTGACTCCGTTGCACTGTGGGGCGAGAAGTGGCCATGAGCAGGTGGTAGAGATGTTGCTTGACAGATCCGCCCCCATCCTTTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 90 bp TCCGGGGTCAAAGGGCTCTTCCCAGAGCTGTCTAGAAAGGACACTTaGTCTAGAGTATCATCTTCTGGACTGCCCTGGGGAGACGGAGGC +
Preference number: 5 (lower is better)
Translates to: SGVKGLFPELSRKDT*SRVSSSGLPWGDGG
Trigger: GCCTCCGTCTCCCCAGGGCAGTCCAGAAGATGATACTCTAGAGCAAGTGTCCTTTCTAGACAGCTCTGGGAAGAGCCCTTTGACCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS GCA 90 bp GAGTCTTTGCTCACGTCACGATCTGTTTCCTTCTCCACGGTCACCTaGCTTAGTGGGGCTGATTTGGGCTCCTCCTCCTCCGACTCCTCT +
Preference number: 5 (lower is better)
Translates to: ESLLTSRSVSFSTVT*LSGADLGSSSSDSS
Trigger: AGAGGAGTCGGAGGAGGAGGAGCCCAAATCAGCCCCACTAAGGCAGGTGACCGTGGAGAAGGAAACAGATCGTGACGTGAGCAAAGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 90 bp GTCCGGACCGAGCCGCCATATGCAATGCCGTCTCTCCTCTCACATTaGTGGTGTTTGGGGAGGCTCCATGATGCATTAGCTGTGACACGA +
Preference number: 5 (lower is better)
Translates to: VRTEPPYAMPSLLSH*WCLGRLHDALAVTR
Trigger: TCGTGTCACAGCTAATGCATCATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGACGGCATTGCATATGGCGGCTCGGTCCGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 90 bp GCTGGGCTGAGGTCTCAGCAGCAGACTTGGCAACATCTGGAGACATaGCCGACTTGTGTTCAAACAGCCCTGCCAGCTCTTTGGAAGGGT +
Preference number: 5 (lower is better)
Translates to: AGLRSQQQTWQHLET*PTCVQTALPALWKG
Trigger: ACCCTTCCAAAGAGCTGGCAGGGCTGTTTGAACACAAGTCGGCCATGTCTCCAGATGTTGCCAAGTCTGCTGCTGAGACCTCAGCCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS CCA 90 bp TTTCTCAAGTCCTTAGGCTCTGACCTGGTGGACCCCTCTTCTTCCTaGAGGTTGAGCCTGGCTTTGCCGTCAGCCGTAGTCCTGGTCATC +
Preference number: 5 (lower is better)
Translates to: FLKSLGSDLVDPSSS*RLSLALPSAVVLVI
Trigger: GATGACCAGGACTACGGCTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGGACTTGAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
CDS CCA 90 bp CCTTTTCCAGGTGCCCTGCCCGAGCTGCTCTTAAGTAACTTGCGTTaGCATCAGATTCTTCTGGGAAGCCCTCTGGCTCTTCCACGGCCA +
Preference number: 5 (lower is better)
Translates to: PFPGALPELLLSNLR*HQILLGSPLALPRP
Trigger: TGGCCGTGGAAGAGCCAGAGGGCTTCCCAGAAGAATCTGATGCCAACGCAAGTTACTTAAGAGCAGCTCGGGCAGGGCACCTGGAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS CCA 90 bp AGGCTGTGCCTTCCTGACACTCTCCGTTGCTCGGGATGCTGGGGTTaGGGTCGACTGAAGGTGCCACTACATCTCTCTCTAGATTGGTGT +
Preference number: 5 (lower is better)
Translates to: RLCLPDTLRCSGCWG*GRLKVPLHLSLDWC
Trigger: ACACCAATCTAGAGAGAGATGTAGTGGCACCTTCAGTCGACCCCAACCCCAGCATCCCGAGCAACGGAGAGTGTCAGGAAGGCACAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 90 bp CACTACAGGCTGTGCCTTCCTGACACTCTCCGTTGCTCGGGATGCTaGGGTTGGGGTCGACTGAAGGTGCCACTACATCTCTCTCTAGAT +
Preference number: 5 (lower is better)
Translates to: HYRLCLPDTLRCSGC*GWGRLKVPLHLSLD
Trigger: ATCTAGAGAGAGATGTAGTGGCACCTTCAGTCGACCCCAACCCCAGCATCCCGAGCAACGGAGAGTGTCAGGAAGGCACAGCCTGTAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 90 bp GGTGACGGTGACACGGGTGGATCTTACCTTTACTGGCAACTTGGATaGAGGCTGTTTGGCCTTGCCTCTCTCTGGCTGCCCTCGCTTTTG +
Preference number: 5 (lower is better)
Translates to: GDGDTGGSYLYWQLG*RLFGLASLWLPSLL
Trigger: CAAAAGCGAGGGCAGCCAGAGAGAGGCAAGGCCAAACAGCCTCCATCCAAGTTGCCAGTAAAGGTAAGATCCACCCGTGTCACCGTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTTGGTCATGACCTTGTaGCAGAGCCACGGCCAATGG +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTLVMTL*QSHGQW
Trigger: CCATTGGCCGTGGCTCTGCAACAAGGTCATGACCAA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTACTCCACGTCCGCGTTaGTGTCATTCTGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTTPRPR*CHSAGA
Trigger: TGCTCCTGCAGAATGACACAAACGCGGACGTGGAGT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTTCAGGGCTTTGGCATaGGGGCTAGCTTTCTTATCC +
Preference number: 5 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVFRALA*GLAFLS
Trigger: GGATAAGAAAGCTAGCCCCAATGCCAAAGCCCTGAA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTACCTGAGCCCCATCTaGGACCAGATACCGCACCAC +
Preference number: 5 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGYLSPI*DQIPHH
Trigger: GTGGTGCGGTATCTGGTCCAAGATGGGGCTCAGGTA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGGGTGTACCCAGAAGTaGTTGCTGCATTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTGCTQK*LLHWGM
Trigger: CATCCCCCAATGCAGCAACAACTTCTGGGTACACCC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRCGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTCGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: ERWIPILVQGEVTWDACPQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGCCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVCCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGGTCTCCAGCTCCACTaGAAAGGAAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTGLQLH*KGRVTI
Trigger: GATGGTCACCCTTCCTTTCAAGTGGAGCTGGAGACC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGAAAGTAGGGGAAGGCTaGGGAGACACGGGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVKVGEG*GDTGSS
Trigger: AGAGGACCCCGTGTCTCCCAAGCCTTCCCCTACTTT...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTTGTGTCAGGGGTGGTaGCCGGCGAGCGGTCGTCCA +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFLCQGW*PASGRP
Trigger: TGGACGACCGCTCGCCGGCAACCACCCCTGACACAA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS TCA 90 bp AGCCCCACTTTCCCCTCCTCCTCCTCAATAACTTCCAGTTTGCTCTaGCTGAAAGAGCGGTCAGCCGGCTTCAGAATGCCCTCCGTCCAA +
Preference number: 5 (lower is better)
Translates to: SPTFPSSSSITSSLL*LKERSAGFRMPSVQ
Trigger: TTGGACGGAGGGCATTCTGAAGCCGGCTGACCGCTCTTTCAGTCAGAGCAAACTGGAAGTTATTGAGGAGGAGGAGGGGAAAGTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS TCA 90 bp GAGCGGGGTGAAGCCACTCTCAGTTGCTCTATTCACCACCATCTTTaGCTCCACGTCCGCGTTTGTGTCATTCTGCAGGAGCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ERGEATLSCSIHHHL*LHVRVCVILQEQSC
Trigger: GCAGCTCTGCTCCTGCAGAATGACACAAACGCGGACGTGGAGTCAAAGATGGTGGTGAATAGAGCAACTGAGAGTGGCTTCACCCCGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182992.8
CDS GCA 90 bp CTTGGCAACATCTGGAGACATGGCCGACTTGTGTTCAAACAGCCCTaGCAGCTCTTTGGAAGGGTCTCGCCCGGACTGAAAGGCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LGNIWRHGRLVFKQP*QLFGRVSPGLKGLH
Trigger: ATGAAGGCCTTTCAGTCCGGGCGAGACCCTTCCAAAGAGCTGGCAGGGCTGTTTGAACACAAGTCGGCCATGTCTCCAGATGTTGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS GCA 90 bp CATGGCTGTCGTGGTAGAGAGCGCTTTCTCCACCGTGTCAGAGGCTaGGCTCACCACCGAGCTCACAGCGTTTGTGGCTGTAGAAATTTT +
Preference number: 5 (lower is better)
Translates to: HGCRGRERFLHRVRG*AHHRAHSVCGCRNF
Trigger: AAAATTTCTACAGCCACAAACGCTGTGAGCTCGGTGGTGAGCGCAGCCTCTGACACGGTGGAGAAAGCGCTCTCTACCACGACAGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 90 bp CTGGGGAGGTCGGTTTGGAATGGCTTCTCCTCAGGCACGTCTGTCTaGAGTATGGCAGTCATCCTCATGAGATCTTCCTTCATCTCGGCC +
Preference number: 5 (lower is better)
Translates to: LGRSVWNGFSSGTSV*SMAVILMRSSFISA
Trigger: GGCCGAGATGAAGGAAGATCTCATGAGGATGACTGCCATACTGCAGACAGACGTGCCTGAGGAGAAGCCATTCCAAACCGACCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 90 bp GGTCATCTTGCTGGAAAGGGTTGGGTGGTGTGCAGTACAACCCCATaGGGGTCTCCAGCTCCACTTGAAAGGAAGGGTGACCATCAACTG +
Preference number: 5 (lower is better)
Translates to: GHLAGKGWVVCSTTP*GSPAPLERKGDHQL
Trigger: CAGTTGATGGTCACCCTTCCTTTCAAGTGGAGCTGGAGACCCCCATGGGGTTGTACTGCACACCACCCAACCCTTTCCAGCAAGATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CCA 90 bp CGCTCACAAGGACTCTGCGGACGTAAAGCTAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCAGCCTTTTTATGTGCCGGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: RSQGLCGRKAREAKL*RLSAFSAFLCAGRV
Trigger: TACTCTGCCGGCACATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCTAGCTTTACGTCCGCAGAGTCCTTGTGAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CCA 90 bp TTCTTGTCCCCTGCTCTGAGCAACGACAGTTCTTTTGGCTTCCTCTaGAGGCTGGTCATCCTCGCTCTGTTGGGTAGGGACCCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: FLSPALSNDSSFGFL*RLVILALLGRDPVL
Trigger: GAGAACAGGGTCCCTACCCAACAGAGCGAGGATGACCAGCCTCCAGAGGAAGCCAAAAGAACTGTCGTTGCTCAGAGCAGGGGACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTTCGTAACCAAGACCTaGACCACTTCCGCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTFVTKT*TTSACP
Trigger: TGGGCAAGCGGAAGTGGTCAAGGTCTTGGTTACGAA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ATGATCATAACCACCCTCCGATTACCCTCTCCAACACGTCCCTCCACCAACTTACTCTGTGGCCAGGCTTaGGCTGGCGCCATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: MIITTLRLPSPTRPSTNLLCGQA*AGAIVQ
Trigger: CTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAG...TAAGTTGGTGGAGGGACGTGTTGGAGAGGGTAATCGGAGGGTGGTTATGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCTCTGTGGCCAGGCTTaGGCTGGCGCCATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLLCGQA*AGAIVQ
Trigger: CTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTTGGTCATGACCTTGTaGCAGAGCCACGGCCAATGG +
Preference number: 5 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFLVMTL*QSHGQW
Trigger: CCATTGGCCGTGGCTCTGCAACAAGGTCATGACCAA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTCAGGAGGGACACGACTaGGTCATGACCTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFQEGHD*VMTLLQ
Trigger: CTGCAACAAGGTCATGACCAAGTCGTGTCCCTCCTG...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGCAGGAGGGACACGACTaGGTCATGACCTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVQEGHD*VMTLLQ
Trigger: CTGCAACAAGGTCATGACCAAGTCGTGTCCCTCCTG...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCGACTCGGTTACGGCTaGAATAGATGCACCGTGCTT +
Preference number: 5 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCRLGYG*NRCTVL
Trigger: AAGCACGGTGCATCTATTCAAGCCGTAACCGAGTCG...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCACATTGGTGGTGTTaGGGGAGGCTCCATGATGCA +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSHWWC*GRLHDA
Trigger: TGCATCATGGAGCCTCCCCAAACACCACCAATGTGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTCACATTGGTGGTGTTaGGGGAGGCTCCATGATGCA +
Preference number: 5 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCSHWWC*GRLHDA
Trigger: TGCATCATGGAGCCTCCCCAAACACCACCAATGTGA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTCCATCTGGTTCTTCTaGGCCGCGATGTGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVSIWFF*AAMCSG
Trigger: ACCACTGCACATCGCGGCCAAGAAGAACCAGATGGA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFCGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVCGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCSSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCSSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGGTCTCCAGCTCCACTaGAAAGGAAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVGLQLH*KGRVTI
Trigger: GATGGTCACCCTTCCTTTCAAGTGGAGCTGGAGACC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CCAGTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTGGGCCTTAGTGTTATaGGCCCCAGAACTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: PVSLRACAGDSRLPLGVSWALVL*APELSH
Trigger: ATGGGAAAGTTCTGGGGCCAATAACACTAAGGCCCA...CGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp GTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTTCAATGAGTCGGGAGATTaGGTGGGAGAGGTCTCGGTT +
Preference number: 5 (lower is better)
Translates to: VSLRACAGDSRLPLGVSFNESGD*VGEVSV
Trigger: AACCGAGACCTCTCCCACCAAATCTCCCGACTCATT...GAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTCTGGTTGGAAGCTTTaGTGGCGGCGGTTTTGGACT +
Preference number: 5 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCSGWKL*WRRFWT
Trigger: AGTCCAAAACCGCCGCCACAAAAGCTTCCAACCAGA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGCTATCCGAACTTATCTaGGGACTGGCAGAACGGGCT +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRLSELI*GLAERA
Trigger: AGCCCGTTCTGCCAGTCCCAAGATAAGTTCGGATAG...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCATCCTGCTTCCTCTCTaGTGGACCAATCCGTCTTAT +
Preference number: 5 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVILLPL*WTNPSY
Trigger: ATAAGACGGATTGGTCCACAAGAGAGGAAGCAGGAT...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS TCA 90 bp ACTCGGATGACTGGCTCGGCCAACTGGTACTTGTCAGACTCGTCCTaGAGGCTGACCTCCATCATGTCAACCTCCCTTTCGGGGAGATAT +
Preference number: 5 (lower is better)
Translates to: TRMTGSANWYLSDSS*RLTSIMSTSLSGRY
Trigger: ATATCTCCCCGAAAGGGAGGTTGACATGATGGAGGTCAGCCTTCAGGACGAGTCTGACAAGTACCAGTTGGCCGAGCCAGTCATCCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS TCA 90 bp CTTAAGGGCCGAGGACGCCAGGAACAGAGACGACTTGACTGGAGATaGAGTTCGATTGAAATGGGGCTGAGGGCGTGTCTCCGTAGTCAA +
Preference number: 5 (lower is better)
Translates to: LKGRGRQEQRRLDWR*SSIEMGLRACLRSQ
Trigger: TTGACTACGGAGACACGCCCTCAGCCCCATTTCAATCGAACTTCATCTCCAGTCAAGTCGTCTCTGTTCCTGGCGTCCTCGGCCCTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 90 bp AAAGAAGTGTCCTCTGCGGTTACCACTGGAGGTCCACCTGTTGGATaGTCTATGTTTCCCTGGGAAGGCACCAGCCCGTCACTCAGTCTA +
Preference number: 5 (lower is better)
Translates to: KEVSSAVTTGGPPVG*SMFPWEGTSPSLSL
Trigger: TAGACTGAGTGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCATCCAACAGGTGGACCTCCAGTGGTAACCGCAGAGGACACTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CCA 90 bp TCCACGGGCACGTTGTGCTGGAGGAGGAGTTGGACGCAGTTTAAATaGTCTCCTTGTGTGGCCATGTGCAGTGGCGACAATCCATTCTTG +
Preference number: 5 (lower is better)
Translates to: STGTLCWRRSWTQFK*SPCVAMCSGDNPFL
Trigger: CAAGAATGGATTGTCGCCACTGCACATGGCCACACAAGGAGACCATTTAAACTGCGTCCAACTCCTCCTCCAGCACAACGTGCCCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 90 bp CGGACCGAGCCGCCATATGCAATGCCGTCTCTCCTCTCACATTGGTaGTGTTTGGGGAGGCTCCATGATGCATTAGCTGTGACACGATAT +
Preference number: 5 (lower is better)
Translates to: RTEPPYAMPSLLSHW*CLGRLHDALAVTRY
Trigger: ATATCGTGTCACAGCTAATGCATCATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGACGGCATTGCATATGGCGGCTCGGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 90 bp GTCAGGGGTGGTTGCCGGCGAGCGGTCGTCCACCGCCAGACCAAATaGCTTAGTGTCATCTTCCCGAGATTTACCGTCAAAAACTTCATT +
Preference number: 5 (lower is better)
Translates to: VRGGCRRAVVHRQTK*LSVIFPRFTVKNFI
Trigger: AATGAAGTTTTTGACGGTAAATCTCGGGAAGATGACACTAAGCCATTTGGTCTGGCGGTGGACGACCGCTCGCCGGCAACCACCCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182665.8
ENSMUST00000185582.2
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCTCTGTGGCCAGGCTTaGGCTGGCGCCATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFLCGQA*AGAIVQ
Trigger: CTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAG...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSSCCP*RRSFCS
Trigger: TGAACAGAAGCTCCTACGCAAGGGACAGCATGATGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCSSCCP*RRSFCS
Trigger: TGAACAGAAGCTCCTACGCAAGGGACAGCATGATGA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCSSCCP*RRSFCS
Trigger: TGAACAGAAGCTCCTACGCAAGGGACAGCATGATGA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTCAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTCAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGSSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GAGGCACGAAGTTCTATAGTTGCTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACTGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: EARSSIVAVPVASFWAPHCCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...GTGAGGAGCCCAGAAAGAAGCCACAGGAACAGCAACTATAGAACTTCGTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTGGGGTAATCCCTTTGTaGTCTTTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCGVIPL*SLAPSG
Trigger: TCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCC...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTGGGGTAATCCCTTTGTaGTCTTTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTGVIPL*SLAPSG
Trigger: TCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCC...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGCTGCAAGTGAAGACATaGCCAGTTCTGCTCGCTGAA +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRLQVKT*PVLLAE
Trigger: TTCAGCGAGCAGAACTGGCAATGTCTTCACTTGCAG...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CAAGGACTCTGCGGACCAGTCCTCCTACTGCCGGCCTTTCCTCTCTTTGATTTTTCTGCCTCTTTCTGGTaGGAAGCTTTTGTGGCGGCG +
Preference number: 5 (lower is better)
Translates to: QGLCGPVLLLPAFPLFDFSASFW*EAFVAA
Trigger: CGCCGCCACAAAAGCTTCCAACCAGAAAGAGGCAGA...AAAATCAAAGAGAGGAAAGGCCGGCAGTAGGAGGACTGGTCCGCAGAGTCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS TCA 90 bp GAGATGTGGAGTGGAGTCTGGTCATCCTTAGCTTTTGCTTCTACCTaGGCCCCATCTTGGACCAGATACCGCACCACTTCTGCTTGTCCG +
Preference number: 5 (lower is better)
Translates to: EMWSGVWSSLAFAST*APSWTRYRTTSACP
Trigger: CGGACAAGCAGAAGTGGTGCGGTATCTGGTCCAAGATGGGGCTCAGGTAGAAGCAAAAGCTAAGGATGACCAGACTCCACTCCACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS TCA 90 bp TGTTCAAACAGCCCTGCCAGCTCTTTGGAAGGGTCTCGCCCGGACTaGAAGGCCTTCATGATGTCATGGACTGACATGGTCTCCTCAATC +
Preference number: 5 (lower is better)
Translates to: CSNSPASSLEGSRPD*KAFMMSWTDMVSSI
Trigger: GATTGAGGAGACCATGTCAGTCCATGACATCATGAAGGCCTTTCAGTCCGGGCGAGACCCTTCCAAAGAGCTGGCAGGGCTGTTTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS TCA 90 bp ACCTATCCGAACTTATCTTGGGACTGGCAGAACGGGCTCCAAGACTaGAGCCTACGTAACCTTCTGCTGGCAGGGAGTCATCACCTAGCT +
Preference number: 5 (lower is better)
Translates to: TYPNLSWDWQNGLQD*SLRNLLLAGSHHLA
Trigger: AGCTAGGTGATGACTCCCTGCCAGCAGAAGGTTACGTAGGCTTCAGTCTTGGAGCCCGTTCTGCCAGTCCCAAGATAAGTTCGGATAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS TCA 90 bp GTTCCTTCTCAGAGGTGGAAGGCCTCATGGAGGCCGGCGGCATTTTaGGTTTATGCTCCTGCAAGGCCATGGCTGGCTTTAAAATCCTCT +
Preference number: 5 (lower is better)
Translates to: VPSQRWKASWRPAAF*VYAPARPWLALKSS
Trigger: AGAGGATTTTAAAGCCAGCCATGGCCTTGCAGGAGCATAAACTCAAAATGCCGCCGGCCTCCATGAGGCCTTCCACCTCTGAGAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS TCA 90 bp CCGAGACTCTCTGCTGGAGTGTCCTTGAGTCCCTGGACTCTTTCCTaGGCCTTTTACTGGATTAGCTTCCTCTGTGGTGCAAGTGGATGC +
Preference number: 5 (lower is better)
Translates to: PRLSAGVSLSPWTLS*AFYWISFLCGASGC
Trigger: GCATCCACTTGCACCACAGAGGAAGCTAATCCAGTAAAAGGCTCAGGAAAGAGTCCAGGGACTCAAGGACACTCCAGCAGAGAGTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 90 bp GCCGTGTTTCCTTTCTTTGTGGCGGCATCAACATTGGCTTCCCTCTaGAGCAGCTCAGAGACCACTTCCACATGGCCTTCTTTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: AVFPFFVAASTLASL*SSSETTSTWPSLEA
Trigger: TGCTTCCAAAGAAGGCCATGTGGAAGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCACAAAGAAAGGAAACACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS GCA 90 bp GTGGAAGGCCTCATGGAGGCCGGCGGCATTTTGAGTTTATGCTCCTaGAAGGCCATGGCTGGCTTTAAAATCCTCTTCTGTCTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: VEGLMEAGGILSLCS*KAMAGFKILFCLSS
Trigger: AGAGGAGAGACAGAAGAGGATTTTAAAGCCAGCCATGGCCTTGCAGGAGCATAAACTCAAAATGCCGCCGGCCTCCATGAGGCCTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 90 bp TCAGAGGTGGAAGGCCTCATGGAGGCCGGCGGCATTTTGAGTTTATaGTCCTGCAAGGCCATGGCTGGCTTTAAAATCCTCTTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: SEVEGLMEAGGILSL*SCKAMAGFKILFCL
Trigger: GAGACAGAAGAGGATTTTAAAGCCAGCCATGGCCTTGCAGGAGCATAAACTCAAAATGCCGCCGGCCTCCATGAGGCCTTCCACCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 90 bp TGGATCTTACCTTTACTGGCAACTTGGATGGAGGCTGTTTGGCCTTaGCTCTCTCTGGCTGCCCTCGCTTTTGTGTGGCGCATGCTTTTC +
Preference number: 5 (lower is better)
Translates to: WILPLLATWMEAVWP*LSLAALAFVWRMLF
Trigger: GAAAAGCATGCGCCACACAAAAGCGAGGGCAGCCAGAGAGAGGCAAGGCCAAACAGCCTCCATCCAAGTTGCCAGTAAAGGTAAGATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 90 bp CGATGTGTAAGGCCGTGTTTCCTTTCTTTGTGGCGGCATCAACATTaGCTTCCCTCTGCAGCAGCTCAGAGACCACTTCCACATGGCCTT +
Preference number: 5 (lower is better)
Translates to: RCVRPCFLSLWRHQH*LPSAAAQRPLPHGL
Trigger: AAGGCCATGTGGAAGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCACAAAGAAAGGAAACACGGCCTTACACATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS CCA 90 bp CTCGCTCTGACACAGGTCCTTCAACTGGCTCTCATCTACGTCCAGTaGGTCGGCCGGGTCTGTTACAGTTACAGAATCGTCCATTTTGCT +
Preference number: 5 (lower is better)
Translates to: LALTQVLQLALIYVQ*VGRVCYSYRIVHFA
Trigger: AGCAAAATGGACGATTCTGTAACTGTAACAGACCCGGCCGACCCACTGGACGTAGATGAGAGCCAGTTGAAGGACCTGTGTCAGAGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CCA 90 bp GGGCGACAGCAAAGCCGCTGCCGACTTGGTGAACGAGTTAGAGTCTaGGAGTTTCTTCAGTGCTGGTTCTGGCAAAACATTGACTACCGA +
Preference number: 5 (lower is better)
Translates to: GRQQSRCRLGERVRV*EFLQCWFWQNIDYR
Trigger: TCGGTAGTCAATGTTTTGCCAGAACCAGCACTGAAGAAACTCCCAGACTCTAACTCGTTCACCAAGTCGGCAGCGGCTTTGCTGTCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 90 bp CAGGAGCTGTGCGGAACTAGGGCGGCTATCTTCTTCTTGGGACCCTaGAGTGTTTACTCTGGAGGATTCCAGATAAGAAGGCAAGGACTC +
Preference number: 5 (lower is better)
Translates to: QELCGTRAAIFFLGP*SVYSGGFQIRRQGL
Trigger: GAGTCCTTGCCTTCTTATCTGGAATCCTCCAGAGTAAACACTCCAGGGTCCCAAGAAGAAGATAGCCGCCCTAGTTCCGCACAGCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTCCACATGGCCTTCTTaGGAAGCAAGATGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFSTWPS*EARWSA
Trigger: TGCACTCCATCTTGCTTCCAAAGAAGGCCATGTGGA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp AACCCTGCCCACCCCCAAAATAGCACATTGAGTCAAATCAGTGCCACCTTGCACCAGGAGGGACACGACTaGGTCATGACCTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: NPAHPQNSTLSQISATLHQEGHD*VMTLLQ
Trigger: CTGCAACAAGGTCATGACCAAGTCGTGTCCCTCCTG...GTGCAAGGTGGCACTGATTTGACTCAATGTGCTATTTTGGGGGTGGGCAGGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTTCAGGGCTTTGGCATaGGGGCTAGCTTTCTTATCC +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVFRALA*GLAFLS
Trigger: GGATAAGAAAGCTAGCCCCAATGCCAAAGCCCTGAA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTACCTGAGCCCCATCTaGGACCAGATACCGCACCAC +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLYLSPI*DQIPHH
Trigger: GTGGTGCGGTATCTGGTCCAAGATGGGGCTCAGGTA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTACCTGAGCCCCATCTaGGACCAGATACCGCACCAC +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFYLSPI*DQIPHH
Trigger: GTGGTGCGGTATCTGGTCCAAGATGGGGCTCAGGTA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGSSCCP*RRSFCS
Trigger: TGAACAGAAGCTCCTACGCAAGGGACAGCATGATGA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVSSCCP*RRSFCS
Trigger: TGAACAGAAGCTCCTACGCAAGGGACAGCATGATGA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFCCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GTGATTGGCTTGCTGAAAGGGGTCTACATCTCAGAGCCAGTACACAATACAGCGGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: VIGLLKGVYISEPVHNTAAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...CGCTGTATTGTGTACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGGTCTCCAGCTCCACTaGAAAGGAAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKGLQLH*KGRVTI
Trigger: GATGGTCACCCTTCCTTTCAAGTGGAGCTGGAGACC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTCTGCAAGTGAAGACATaGCCAGTTCTGCTCGCTGAA +
Preference number: 5 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFLQVKT*PVLLAE
Trigger: TTCAGCGAGCAGAACTGGCAATGTCTTCACTTGCAG...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGCTGCAAGTGAAGACATaGCCAGTTCTGCTCGCTGAA +
Preference number: 5 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGLQVKT*PVLLAE
Trigger: TTCAGCGAGCAGAACTGGCAATGTCTTCACTTGCAG...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCTCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVSSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATCCTGCTTCCTCTCTaGTGGACCAATCCGTCTTAT +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTILLPL*WTNPSY
Trigger: ATAAGACGGATTGGTCCACAAGAGAGGAAGCAGGAT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS TCA 90 bp GATTTCCTTCTTCGTCTTCACCTTATAGCCTTCTCCCTTAGGCTCTaGCCTGGTGGACCCCTCTTCTTCCTGGAGGTTGAGCCTGGCTTT +
Preference number: 5 (lower is better)
Translates to: DFLLRLHLIAFSLRL*PGGPLFFLEVEPGF
Trigger: AAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGGGAGAAGGCTATAAGGTGAAGACGAAGAAGGAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182029.8
ENSMUST00000183023.8
CDS TCA 90 bp TTCTTAACCGGGATTCGGGACGGCCCGTCCAGATGTTTCTCCTCGTaGGGTGGATCCTTACTTTTGGCACGTGCCCCTTGTTCGAATTTT +
Preference number: 5 (lower is better)
Translates to: FLTGIRDGPSRCFSS*GGSLLLARAPCSNF
Trigger: AAAATTCGAACAAGGGGCACGTGCCAAAAGTAAGGATCCACCTCACGAGGAGAAACATCTGGACGGGCCGTCCCGAATCCCGGTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 90 bp CCAGTGGGTCGGCCGGGTCTGTTACAGTTACAGAATCGTCCATTTTaGTGTCTTCTAAAGAAGTGTCCTCTGCGGTTACCACTGGAGGTC +
Preference number: 5 (lower is better)
Translates to: PVGRPGLLQLQNRPF*CLLKKCPLRLPLEV
Trigger: GACCTCCAGTGGTAACCGCAGAGGACACTTCTTTAGAAGACAGCAAAATGGACGATTCTGTAACTGTAACAGACCCGGCCGACCCACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS GCA 90 bp GAAACAGACCCATTGACTAGCGCTACCTCTGCATGTCCGGACATCTaGTTTAAGGGGGAGGAGAGAGACGATGCCATCGTAGCTTTAGCT +
Preference number: 5 (lower is better)
Translates to: ETDPLTSATSACPDI*FKGEERDDAIVALA
Trigger: AGCTAAAGCTACGATGGCATCGTCTCTCTCCTCCCCCTTAAAGCAGATGTCCGGACATGCAGAGGTAGCGCTAGTCAATGGGTCTGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 90 bp GCGTGTCTCCGTAGTCAATGTTTTAATGGGCGACAGCAAAGCCGCTaGCGACTTGGTGAACGAGTTAGAGTCTGGGAGTTTCTTCAGTGC +
Preference number: 5 (lower is better)
Translates to: ACLRSQCFNGRQQSR*RLGERVRVWEFLQC
Trigger: GCACTGAAGAAACTCCCAGACTCTAACTCGTTCACCAAGTCGGCAGCGGCTTTGCTGTCGCCCATTAAAACATTGACTACGGAGACACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 90 bp CCAACTCTGACACAGGTCCTTCAACTGGCTCTCATCTACGTCCAGTaGGTCGGCCGGGTCTGTTACAGTTACAGAATCGTCCATTTTGCT +
Preference number: 5 (lower is better)
Translates to: PTLTQVLQLALIYVQ*VGRVCYSYRIVHFA
Trigger: AGCAAAATGGACGATTCTGTAACTGTAACAGACCCGGCCGACCCACTGGACGTAGATGAGAGCCAGTTGAAGGACCTGTGTCAGAGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182207.8
ENSMUST00000182692.8
CDS CCA 90 bp TTCTTCATCGTCTATTCTCCCTTCTCTGGGGAGGTCGGTTTGGAATaGCTTCTCCTCAGGCACGTCTGTCTGCAGTATGGCAGTCATCCT +
Preference number: 5 (lower is better)
Translates to: FFIVYSPFSGEVGLE*LLLRHVCLQYGSHP
Trigger: AGGATGACTGCCATACTGCAGACAGACGTGCCTGAGGAGAAGCCATTCCAAACCGACCTCCCCAGAGAAGGGAGAATAGACGATGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 90 bp AAAGGTTCTTCATCGTCTATTCTCCCTTCTCTGGGGAGGTCGGTTTaGAATGGCTTCTCCTCAGGCACGTCTGTCTGCAGTATGGCAGTC +
Preference number: 5 (lower is better)
Translates to: KGSSSSILPSLGRSV*NGFSSGTSVCSMAV
Trigger: GACTGCCATACTGCAGACAGACGTGCCTGAGGAGAAGCCATTCCAAACCGACCTCCCCAGAGAAGGGAGAATAGACGATGAAGAACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 90 bp GTCATCCTCTGGAGAGTGTCCTTTGTCACTCTTCGGGGACTTGGGTaGCCCTTTGCTCTCGACACACACGTCCTTTTTGAGTATCTCACT +
Preference number: 5 (lower is better)
Translates to: VILWRVSFVTLRGLG*PFALDTHVLFEYLT
Trigger: AGTGAGATACTCAAAAAGGACGTGTGTGTCGAGAGCAAAGGGCCACCCAAGTCCCCGAAGAGTGACAAAGGACACTCTCCAGAGGATGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp GTGATTGGCTTGCTGAAAGGGGTCTACATCTCAGAGCCAGTACACAATACAGCGTTGGTCATGACCTTGTaGCAGAGCCACGGCCAATGG +
Preference number: 5 (lower is better)
Translates to: VIGLLKGVYISEPVHNTALVMTL*QSHGQW
Trigger: CCATTGGCCGTGGCTCTGCAACAAGGTCATGACCAA...CGCTGTATTGTGTACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTACTCCACGTCCGCGTTaGTGTCATTCTGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLTPRPR*CHSAGA
Trigger: TGCTCCTGCAGAATGACACAAACGCGGACGTGGAGT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTATCCATTCTTGGTTTTaGAAAGGATGGGGGCGGATC +
Preference number: 5 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFIHSWF*KGWGRI
Trigger: GATCCGCCCCCATCCTTTCAAAAACCAAGAATGGAT...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CTCCTCACGGTCAAATGTGAGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCACTGTCTCTCCTCTCACATaGGTGGTGTTTGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LLTVKCEREALKKVKQTTVSPLT*VVFGEA
Trigger: AGCCTCCCCAAACACCACCAATGTGAGAGGAGAGAC...AGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCGGGTGTACCCAGAAGTaGTTGCTGCATTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIGCTQK*LLHWGM
Trigger: CATCCCCCAATGCAGCAACAACTTCTGGGTACACCC...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGGGTGTAGCCCATCTTaGTCTGAGCATCCACATGGG +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFGCSPS*SEHPHG
Trigger: CCCATGTGGATGCTCAGACAAAGATGGGCTACACCC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: LSRVKSLGTPVLGCICDICGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFCGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLCCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADCCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTCCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LKNMASCVVHCTCSVCISSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAGAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTCTACTTCTTCAAGTaGAATGTCCTCAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: ESAGSPSLSRVKSLGTPVLYFFK*NVLKQR
Trigger: TCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGAG...GACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACAGGAGACATGGCCGACTaGTGTTCAAACAGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTGDMAD*CSNSPA
Trigger: GGCAGGGCTGTTTGAACACAAGTCGGCCATGTCTCC...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAACTGTGGCTTTTGCCATaGCCGGAGCCAGATTTGCTT +
Preference number: 5 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKLWLLP*PEPDLL
Trigger: AAGCAAATCTGGCTCCGGCAATGGCAAAAGCCACAG...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS GCA 90 bp AGGAGGAGTTGGACGCAGTTTAAATGGTCTCCTTGTGTGGCCATGTaGAGTGGCGACAATCCATTCTTGGTTTTTGAAAGGATGGGGGCG +
Preference number: 5 (lower is better)
Translates to: RRSWTQFKWSPCVAM*SGDNPFLVFERMGA
Trigger: CGCCCCCATCCTTTCAAAAACCAAGAATGGATTGTCGCCACTGCACATGGCCACACAAGGAGACCATTTAAACTGCGTCCAACTCCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 90 bp TACCATCTGCCTCTTTCTGGTTGGAAGCTTTTGTGGCGGCGGTTTTaGACTTCGCCGTGTCTTTCTGCCCTTCGTCAACTTCCTTCAACT +
Preference number: 5 (lower is better)
Translates to: YHLPLSGWKLLWRRF*TSPCLSALRQLPST
Trigger: AGTTGAAGGAAGTTGACGAAGGGCAGAAAGACACGGCGAAGTCCAAAACCGCCGCCACAAAAGCTTCCAACCAGAAAGAGGCAGATGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 90 bp CATCCTCATCCTGTAGGTCATAGCCATCCAGAGAGTCTATCTCCGTaGCATCTGTGTCATGAGAAAACTCAGCCGTGGTCGCAATGGAAC +
Preference number: 5 (lower is better)
Translates to: HPHPVGHSHPESLSP*HLCHEKTQPWSQWN
Trigger: GTTCCATTGCGACCACGGCTGAGTTTTCTCATGACACAGATGCCACGGAGATAGACTCTCTGGATGGCTATGACCTACAGGATGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTTCTGGTTACAGATGTaGACGTCCACTCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRFWLQM*TSTPFL
Trigger: CAAAAATGGAGTGGACGTCAACATCTGTAACCAGAA...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTTCGTAACCAAGACCTaGACCACTTCCGCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFFVTKT*TTSACP
Trigger: TGGGCAAGCGGAAGTGGTCAAGGTCTTGGTTACGAA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATACTCCACGTCCGCGTTaGTGTCATTCTGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADTPRPR*CHSAGA
Trigger: TGCTCCTGCAGAATGACACAAACGCGGACGTGGAGT...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCAAGCCATTCAGGGCTTaGGCATTGGGGCTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIKPFRA*ALGLAF
Trigger: GAAAGCTAGCCCCAATGCCAAAGCCCTGAATGGCTT...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTAAGCCATTCAGGGCTTaGGCATTGGGGCTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFKPFRA*ALGLAF
Trigger: GAAAGCTAGCCCCAATGCCAAAGCCCTGAATGGCTT...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTCACATTGGTGGTGTTaGGGGAGGCTCCATGATGCA +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSHWWC*GRLHDA
Trigger: TGCATCATGGAGCCTCCCCAAACACCACCAATGTGA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGTCTCTCCTCTCACATaGGTGGTGTTTGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLVSPLT*VVFGEA
Trigger: AGCCTCCCCAAACACCACCAATGTGAGAGGAGAGAC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGTCTCTCCTCTCACATaGGTGGTGTTTGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADVSPLT*VVFGEA
Trigger: AGCCTCCCCAAACACCACCAATGTGAGAGGAGAGAC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATCCATCTGGTTCTTCTaGGCCGCGATGTGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: LKNMASCVVHCTCSVCISSIWFF*AAMCSG
Trigger: ACCACTGCACATCGCGGCCAAGAAGAACCAGATGGA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATCCATCTGGTTCTTCTaGGCCGCGATGTGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTSIWFF*AAMCSG
Trigger: ACCACTGCACATCGCGGCCAAGAAGAACCAGATGGA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTCCATCTGGTTCTTCTaGGCCGCGATGTGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADSIWFF*AAMCSG
Trigger: ACCACTGCACATCGCGGCCAAGAAGAACCAGATGGA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCGGGTGTAGCCCATCTTaGTCTGAGCATCCACATGGG +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLGCSPS*SEHPHG
Trigger: CCCATGTGGATGCTCAGACAAAGATGGGCTACACCC...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GAGCGCTGGATCCCCATCCTTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTATCCATTCTTCGTCTaGGCATTAACTTTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: ERWIPILVQGEVTWDACPYPFFV*ALTFAE
Trigger: TTCTGCAAAAGTTAATGCCAAGACGAAGAATGGATA...AGGACAGGCGTCCCAAGTGACTTCACCCTGGACAAGGATGGGGATCCAGCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFCGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTCGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADCGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLCGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GAGGCACGAAGTTCTATAGTTGCTGTTCCTGTGGCTTCTTTCTGGGCTCCTCACCAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: EARSSIVAVPVASFWAPHQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...GTGAGGAGCCCAGAAAGAAGCCACAGGAACAGCAACTATAGAACTTCGTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRNLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCNLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: IIANIQESVKESRERWIPAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGAACAGAGATTTGACCTaGTCTTCTGTCACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRNRDLT*SSVTSS
Trigger: TGAGGAAGTGACAGAAGACAAGGTCAAATCTCTGTT...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTAACAGAGATTTGACCTaGTCTTCTGTCACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTNRDLT*SSVTSS
Trigger: TGAGGAAGTGACAGAAGACAAGGTCAAATCTCTGTT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTAACAGAGATTTGACCTaGTCTTCTGTCACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCNRDLT*SSVTSS
Trigger: TGAGGAAGTGACAGAAGACAAGGTCAAATCTCTGTT...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRSSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCSSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: LKNMASCVVHCTCSVCISSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTCAGTTCTGTGGCTTTaGCCATTGCCGGAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSVLWL*PLPEPD
Trigger: ATCTGGCTCCGGCAATGGCAAAAGCCACAGAACTGA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGGTCATTGTTTCCATTTaGAGCTGTTTCGTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRVIVSI*SCFVLR
Trigger: CCTCAGAACGAAACAGCTCAAAATGGAAACAATGAC...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCGGGTACTTTCGTCAGTaGGTGTTCTGGCTGGCGTTG +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFGYFRQ*VFWLAL
Trigger: CAACGCCAGCCAGAACACCAACTGACGAAAGTACCC...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS TCA 90 bp GAATTCTTCGTCAACTTTGTAACTGAAGTAAGTATCAGGGAGCACTaGTCTGTCCGGGTGTCTGCCTTCCAGGGTGAAAAACTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: EFFVNFVTEVSIREH*SVRVSAFQGEKLGP
Trigger: GGGGCCCAGTTTTTCACCCTGGAAGGCAGACACCCGGACAGATCAGTGCTCCCTGATACTTACTTCAGTTACAAAGTTGACGAAGAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS GCA 90 bp TGTCTGAGGGAGTCAGAATCAAACTCCCTCGTGAACGTCAGGTGCTaGTCTTTGGATGGTACCAGAAGTTCCTCTATCATCATGCTGTCC +
Preference number: 5 (lower is better)
Translates to: CLRESESNSLVNVRC*SLDGTRSSSIIMLS
Trigger: GGACAGCATGATGATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGACGTTCACGAGGGAGTTTGATTCTGACTCCCTCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS GCA 90 bp CGGGTTTCAAAGCCACTGTCAGACAAGGGACTTTTATCTTGGTCATaGTGGGAAAAGTCATCGGGAGACTCTAGGATGGCATCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: RVSKPLSDKGLLSWS*WEKSSGDSRMASAP
Trigger: TGGAGCAGATGCCATCCTAGAGTCTCCCGATGACTTTTCCCAGCATGACCAAGATAAAAGTCCCTTGTCTGACAGTGGCTTTGAAACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS GCA 90 bp CTGATATCCGTCCGCTCACAAGGACTCTGCGGACCTTTTTCGATGTaGACTTCTATAATGCGCTCCAGTTTGGGTTTCATTTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LISVRSQGLCGPFSM*TSIMRSSLGFIWLS
Trigger: GGACAGCCAAATGAAACCCAAACTGGAGCGCATTATAGAAGTGCACATCGAAAAAGGTCCGCAGAGTCCTTGTGAGCGGACGGATATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
CDS GCA 90 bp CCCTTTATAATCACACGCCTTCGTATGACCCGGGTAGTGATCCTCTaGTCCTCCTCTGAGCTTGAATCACTCTCACTGTTTCTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: PFIITRLRMTRVVIL*SSSELESLSLFLKS
Trigger: GGACTTGAGAAACAGTGAGAGTGATTCAAGCTCAGAGGAGGAGCAGAGGATCACTACCCGGGTCATACGAAGGCGTGTGATTATAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS GCA 90 bp CTCTTTGGATGGTACCAGAAGTTCCTCTATCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAAGGTGTAGGACCTATCCGAACTGGC +
Preference number: 5 (lower is better)
Translates to: LFGWYQKFLYHHAVP*VGASVQGVGPIRTG
Trigger: GCCAGTTCGGATAGGTCCTACACCTTGAACAGAAGCTCCTACGCAAGGGACAGCATGATGATAGAGGAACTTCTGGTACCATCCAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182795.8
CDS GCA 90 bp CGCTGCCGACTTGGTGAACGAGTTAGAGTCTGGGAGTTTCTTCAGTaGTGGTTCTGGCAAAACATTGACTACCGAGTATACTGGCACTGT +
Preference number: 5 (lower is better)
Translates to: RCRLGERVRVWEFLQ*WFWQNIDYRVYWHC
Trigger: ACAGTGCCAGTATACTCGGTAGTCAATGTTTTGCCAGAACCAGCACTGAAGAAACTCCCAGACTCTAACTCGTTCACCAAGTCGGCAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 90 bp TCAACATTGGCTTCCCTCTGCAGCAGCTCAGAGACCACTTCCACATaGCCTTCTTTGGAAGCAAGATGGAGTGCATTCAATCCATTCTGG +
Preference number: 5 (lower is better)
Translates to: STLASLCSSSETTST*PSLEARWSAFNPFW
Trigger: CCAGAATGGATTGAATGCACTCCATCTTGCTTCCAAAGAAGGCCATGTGGAAGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS CCA 90 bp GTCAGAATCAAACTCCCTCGTGAACGTCAGGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTATCATCATGCTGTCCCTTGCGTAGGA +
Preference number: 5 (lower is better)
Translates to: VRIKLPRERQVLLFG*YQKFLYHHAVPCVG
Trigger: TCCTACGCAAGGGACAGCATGATGATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGACGTTCACGAGGGAGTTTGATTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CCA 90 bp GGCTTCTCGTATTTCCTCAGAACTAAATTCTGTCCAGTCATCCTCTaGAGAGTGTCCTTTGTCACTCTTCGGGGACTTGGGTGGCCCTTT +
Preference number: 5 (lower is better)
Translates to: GFSYFLRTKFCPVIL*RVSFVTLRGLGWPF
Trigger: AAAGGGCCACCCAAGTCCCCGAAGAGTGACAAAGGACACTCTCCAGAGGATGACTGGACAGAATTTAGTTCTGAGGAAATACGAGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 90 bp TCCTCTGTGGTGCAAGTGGATGCAGCGCGTCCTGTCAGAACTATGTaGCTTGTGCTGTTATCTGTCTGCATAGTGGAAGCATCCAGATTA +
Preference number: 5 (lower is better)
Translates to: SSVVQVDAARPVRTM*LVLLSVCIVEASRL
Trigger: TAATCTGGATGCTTCCACTATGCAGACAGATAACAGCACAAGCCACATAGTTCTGACAGGACGCGCTGCATCCACTTGCACCACAGAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 90 bp ACCTGTTTTACTGTCTGCCTTATGGTTTGGCGGGAAGACATCTTTTaGTGCGGTGGCCTTTATAGGAAGCTTGGATTTCCGCCTAAGCCC +
Preference number: 5 (lower is better)
Translates to: TCFTVCLMVWREDIF*CGGLYRKLGFPPKP
Trigger: GGGCTTAGGCGGAAATCCAAGCTTCCTATAAAGGCCACCGCACCAAAAGATGTCTTCCCGCCAAACCATAAGGCAGACAGTAAAACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTTCTGGTTACAGATGTaGACGTCCACTCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGFWLQM*TSTPFL
Trigger: CAAAAATGGAGTGGACGTCAACATCTGTAACCAGAA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTTCTGGTTACAGATGTaGACGTCCACTCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVFWLQM*TSTPFL
Trigger: CAAAAATGGAGTGGACGTCAACATCTGTAACCAGAA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCCACATGGCCTTCTTaGGAAGCAAGATGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSTWPS*EARWSA
Trigger: TGCACTCCATCTTGCTTCCAAAGAAGGCCATGTGGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATTCGTAACCAAGACCTaGACCACTTCCGCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTFVTKT*TTSACP
Trigger: TGGGCAAGCGGAAGTGGTCAAGGTCTTGGTTACGAA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGCAGGAGGGACACGACTaGGTCATGACCTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMQEGHD*VMTLLQ
Trigger: CTGCAACAAGGTCATGACCAAGTCGTGTCCCTCCTG...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCTCCAACACGTCCACTCCACGTCCGCGTTaGTGTCATTCTGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: YTMGYDHNHPPITLSNTSTPRPR*CHSAGA
Trigger: TGCTCCTGCAGAATGACACAAACGCGGACGTGGAGT...GGACGTGTTGGAGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CAA 90 bp CTAGTGATTGGCTTGCTGAAAGGGGTCTACATCTCAGAGCCAGTACACAATACAACTCCACGTCCGCGTTaGTGTCATTCTGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: LVIGLLKGVYISEPVHNTTPRPR*CHSAGA
Trigger: TGCTCCTGCAGAATGACACAAACGCGGACGTGGAGT...TGTATTGTGTACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATCCATTCTTGGTTTTaGAAAGGATGGGGGCGGATC +
Preference number: 5 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKIHSWF*KGWGRI
Trigger: GATCCGCCCCCATCCTTTCAAAAACCAAGAATGGAT...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GTGATTGGCTTGCTGAAAGGGGTCTACATCTCAGAGCCAGTACACAATACAGCGTTCAGGGCTTTGGCATaGGGGCTAGCTTTCTTATCC +
Preference number: 5 (lower is better)
Translates to: VIGLLKGVYISEPVHNTAFRALA*GLAFLS
Trigger: GGATAAGAAAGCTAGCCCCAATGCCAAAGCCCTGAA...CGCTGTATTGTGTACTGGCTCTGAGATGTAGACCCCTTTCAGCAAGCCAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATAAGCCATTCAGGGCTTaGGCATTGGGGCTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADKPFRA*ALGLAF
Trigger: GAAAGCTAGCCCCAATGCCAAAGCCCTGAATGGCTT...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCGACTCGGTTACGGCTaGAATAGATGCACCGTGCTT +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLRLGYG*NRCTVL
Trigger: AAGCACGGTGCATCTATTCAAGCCGTAACCGAGTCG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATCTGCAGCAGGAGACTaGCGACTTCAAGCTTTCCGT +
Preference number: 5 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTSAAGD*RLQAFR
Trigger: ACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAGA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTCTGCAGCAGGAGACTaGCGACTTCAAGCTTTCCGT +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSAAGD*RLQAFR
Trigger: ACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAGA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSSCCP*RRSFCS
Trigger: TGAACAGAAGCTCCTACGCAAGGGACAGCATGATGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSSCCP*RRSFCS
Trigger: TGAACAGAAGCTCCTACGCAAGGGACAGCATGATGA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADSSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: LKNMASCVVHCTCSVCISSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVCCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTGGGGTAATCCCTTTGTaGTCTTTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLGVIPL*SLAPSG
Trigger: TCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCC...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCGGTCTCCAGCTCCACTaGAAAGGAAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: IIANIQESVKESRERWIPGLQLH*KGRVTI
Trigger: GATGGTCACCCTTCCTTTCAAGTGGAGCTGGAGACC...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGGTCTCCAGCTCCACTaGAAAGGAAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMGLQLH*KGRVTI
Trigger: GATGGTCACCCTTCCTTTCAAGTGGAGCTGGAGACC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAACAGAGATTTGACCTaGTCTTCTGTCACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGNRDLT*SSVTSS
Trigger: TGAGGAAGTGACAGAAGACAAGGTCAAATCTCTGTT...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVSSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTTGACACGCATGCCTTaGCTTAGAACCCGACTGTGG +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFLTRMP*LRTRLW
Trigger: CCACAGTCGGGTTCTAAGCAAAGGCATGCGTGTCAA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CAA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCAGTTTGGGTTTCATTaGGCTGTCCTTCTCTGCGTG +
Preference number: 5 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIQFGFH*AVLLCV
Trigger: CACGCAGAGAAGGACAGCCAAATGAAACCCAAACTG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CAA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGTTGTCCCCTCGGTTATaGGGCCAAGGGTCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMLSPRL*GQGSKS
Trigger: CGACTTTGACCCTTGGCCCAATAACCGAGGGGACAA...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTATCCGAACTTATCTaGGGACTGGCAGAACGGGCT +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADLSELI*GLAERA
Trigger: AGCCCGTTCTGCCAGTCCCAAGATAAGTTCGGATAG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTTTCTCGTGATGAGGTaGCCTTCTTCATCAGTAAAT +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTFLVMR*PSSSVN
Trigger: ATTTACTGATGAAGAAGGCAACCTCATCACGAGAAA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS TCA 90 bp TTCAGAATGCCCTCCGTCCAAACATCCTTCTTGGTGTCTATGGTCTaGCTTGGGAGTTTAGAGTCGCTCTCTGTTAGACCGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: FRMPSVQTSFLVSMV*LGSLESLSVRPSSS
Trigger: TGAGGATGACGGTCTAACAGAGAGCGACTCTAAACTCCCAAGTCAGACCATAGACACCAAGAAGGATGTTTGGACGGAGGGCATTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS GCA 90 bp ACTCAAAAGCTTCAGTGTTTTATAAGAGTCATCGGACAGGAGCTGTaGGGAACTAGGGCGGCTATCTTCTTCTTGGGACCCTGGAGTGTT +
Preference number: 5 (lower is better)
Translates to: TQKLQCFIRVIGQEL*GTRAAIFFLGPWSV
Trigger: AACACTCCAGGGTCCCAAGAAGAAGATAGCCGCCCTAGTTCCGCACAGCTCCTGTCCGATGACTCTTATAAAACACTGAAGCTTTTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 90 bp TGTGCTGGAGGAGGAGTTGGACGCAGTTTAAATGGTCTCCTTGTGTaGCCATGTGCAGTGGCGACAATCCATTCTTGGTTTTTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: CAGGGVGRSLNGLLV*PCAVATIHSWFLKG
Trigger: TCCTTTCAAAAACCAAGAATGGATTGTCGCCACTGCACATGGCCACACAAGGAGACCATTTAAACTGCGTCCAACTCCTCCTCCAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 90 bp TCACTGCGGGTTTCAAAGCCACTGTCAGACAAGGGACTTTTATCTTaGTCATGCTGGGAAAAGTCATCGGGAGACTCTAGGATGGCATCT +
Preference number: 5 (lower is better)
Translates to: SLRVSKPLSDKGLLS*SCWEKSSGDSRMAS
Trigger: AGATGCCATCCTAGAGTCTCCCGATGACTTTTCCCAGCATGACCAAGATAAAAGTCCCTTGTCTGACAGTGGCTTTGAAACCCGCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS CCA 90 bp ACCAACCTGCCTCGGTTTACCTGTTTTACTGTCTGCCTTATGGTTTaGCGGGAAGACATCTTTTGGTGCGGTGGCCTTTATAGGAAGCTT +
Preference number: 5 (lower is better)
Translates to: TNLPRFTCFTVCLMV*REDIFWCGGLYRKL
Trigger: AAGCTTCCTATAAAGGCCACCGCACCAAAAGATGTCTTCCCGCCAAACCATAAGGCAGACAGTAAAACAGGTAAACCGAGGCAGGTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTTCGTAACCAAGACCTaGACCACTTCCGCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: IIANIQESVKESRERWIPFVTKT*TTSACP
Trigger: TGGGCAAGCGGAAGTGGTCAAGGTCTTGGTTACGAA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CTGAGAAAAATGACTCTCCTTCCTCTAGTCACCGTCAACTGCCAATTGCTTCTCTTCGTAACCAAGACCTaGACCACTTCCGCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: LRKMTLLPLVTVNCQLLLFVTKT*TTSACP
Trigger: TGGGCAAGCGGAAGTGGTCAAGGTCTTGGTTACGAA...GAGAAGCAATTGGCAGTTGACGGTGACTAGAGGAAGGAGAGTCATTTTTCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CAA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTTGGTCATGACCTTGTaGCAGAGCCACGGCCAATGG +
Preference number: 5 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDLVMTL*QSHGQW
Trigger: CCATTGGCCGTGGCTCTGCAACAAGGTCATGACCAA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATAGCTTCACCATATTaGCATTTCCTCGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKIASPY*HFLASR
Trigger: CCTCGAAGCGAGGAAATGCAAATATGGTGAAGCTAT...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTCGACTCGGTTACGGCTaGAATAGATGCACCGTGCTT +
Preference number: 5 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPRLGYG*NRCTVL
Trigger: AAGCACGGTGCATCTATTCAAGCCGTAACCGAGTCG...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp ATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTTATCCATTCTTCGTCTaGGCATTAACTTTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: IPSSAAPPPGWHRCCFVCYPFFV*ALTFAE
Trigger: TTCTGCAAAAGTTAATGCCAAGACGAAGAATGGATA...ACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTATCCATTCTTCGTCTaGGCATTAACTTTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRYPFFV*ALTFAE
Trigger: TTCTGCAAAAGTTAATGCCAAGACGAAGAATGGATA...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADSSCCP*RRSFCS
Trigger: TGAACAGAAGCTCCTACGCAAGGGACAGCATGATGA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCACAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: LKNMASCVVHCTCSVCISQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCCCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCGGGGTAATCCCTTTGTaGTCTTTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFGVIPL*SLAPSG
Trigger: TCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCC...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGGGGTAATCCCTTTGTaGTCTTTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LKNMASCVVHCTCSVCISGVIPL*SLAPSG
Trigger: TCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCC...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGGGGTAATCCCTTTGTaGTCTTTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADGVIPL*SLAPSG
Trigger: TCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTRVIFK*QTAVWG
Trigger: ACCCCAAACAGCTGTTTGCAACTTAAATATTACTCT...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: LLDLIIPSSAAPPPGWHRRVIFK*QTAVWG
Trigger: ACCCCAAACAGCTGTTTGCAACTTAAATATTACTCT...CCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: DLIIPSSAAPPPGWHRCCSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...ACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTTCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: RVTDVWWKQLTHTPLLVTSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...AGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: FDHSVLCCPSSWVAQVLFGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...AAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCAGAGGACGGAATGATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTAAGTCTAGCTGCTGACGTAAGTGTACTTCCCACCTGGACTGACGTCACTGTCTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: LSLAADVSVLPTWTDVTVFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...GACAGTGACGTCAGTCCAGGTGGGAAGTACACTTACGTCAGCAGCTAGACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
49% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GGTTTAGGTGCGTCTTCTATGACAAGCTTGCTGGTTTCTTCCAGAGATTTCTGGGAGCACATGGGAGAGTaGCTCTTTCTGGGCCTTAGT +
Preference number: 5 (lower is better)
Translates to: GLGASSMTSLLVSSRDFWEHMGE*LFLGLS
Trigger: ACTAAGGCCCAGAAAGAGCAACTCTCCCATGTGCTC...CCAGAAATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGACGCACCTAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp TTCCCAGGTTCTCCCGTGAGGTATGAGGTAATAGAATCCCGAGCCTGGTCAGAGTCAAAGTCGAGACCTTaGGTCGCCACTGTTTTAAAA +
Preference number: 5 (lower is better)
Translates to: FPGSPVRYEVIESRAWSESKSRP*VATVLK
Trigger: TTTTAAAACAGTGGCGACCAAAGGTCTCGACTTTGA...CTCTGACCAGGCTCGGGATTCTATTACCTCATACCTCACGGGAGAACCTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGCTATCCGAACTTATCTaGGGACTGGCAGAACGGGCT +
Preference number: 5 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMLSELI*GLAERA
Trigger: AGCCCGTTCTGCCAGTCCCAAGATAAGTTCGGATAG...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTTTCTCGTGATGAGGTaGCCTTCTTCATCAGTAAAT +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVFLVMR*PSSSVN
Trigger: ATTTACTGATGAAGAAGGCAACCTCATCACGAGAAA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS TCA 90 bp TTGTACCCAACTCTTCCGGGCTGTCGAGTTCTTCATCCATGCCATTaGGAAGCTCCGCGAGGTCTTCGTTTTTACTGTCAAACTGATGTT +
Preference number: 5 (lower is better)
Translates to: LYPTLPGCRVLHPCH*EAPRGLRFYCQTDV
Trigger: AACATCAGTTTGACAGTAAAAACGAAGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGAACTCGACAGCCCGGAAGAGTTGGGTACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 23 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS GCA 90 bp AGCAGGAGACTTGCGACTTCAAGCTTTCCGTATTTGGCTGCCACGTaGAGAGGGGTGAATCCCTTCTTTGTTGTTATGGATAAAGATGCT +
Preference number: 5 (lower is better)
Translates to: SRRLATSSFPYLAAT*RGVNPFFVVMDKDA
Trigger: AGCATCTTTATCCATAACAACAAAGAAGGGATTCACCCCTCTGCACGTGGCAGCCAAATACGGAAAGCTTGAAGTCGCAAGTCTCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 90 bp CTCTTTGGATGGTACCAGAAGTTCCTCTATCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAAGGTGTAGGACCTATCCGAACTGAA +
Preference number: 5 (lower is better)
Translates to: LFGWYQKFLYHHAVP*VGASVQGVGPIRTE
Trigger: TTCAGTTCGGATAGGTCCTACACCTTGAACAGAAGCTCCTACGCAAGGGACAGCATGATGATAGAGGAACTTCTGGTACCATCCAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000218680.2
CDS GCA 90 bp TCATTGCTTTGGGCATGGTCGGCTTTGAATACCGTAACATCATTTTaGACTGGCACTCTTTCCTCTAGGGGATCTACAGCCTTCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SLLWAWSALNTVTSF*TGTLSSRGSTAFCC
Trigger: ACAGCAGAAGGCTGTAGATCCCCTAGAGGAAAGAGTGCCAGTGCAAAATGATGTTACGGTATTCAAAGCCGACCATGCCCAAAGCAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 90 bp TGTTTTACTGTCTGCCTTATGGTTTGGCGGGAAGACATCTTTTGGTaGGGTGGCCTTTATAGGAAGCTTGGATTTCCGCCTAAGCCCTAT +
Preference number: 5 (lower is better)
Translates to: CFTVCLMVWREDIFW*GGLYRKLGFPPKPY
Trigger: ATAGGGCTTAGGCGGAAATCCAAGCTTCCTATAAAGGCCACCGCACCAAAAGATGTCTTCCCGCCAAACCATAAGGCAGACAGTAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 90 bp TGCCGACTTGGTGAACGAGTTAGAGTCTGGGAGTTTCTTCAGTGCTaGTTCTGGCAAAACATTGACTACCGAGTATACTGGCACTGTGAT +
Preference number: 5 (lower is better)
Translates to: CRLGERVRVWEFLQC*FWQNIDYRVYWHCD
Trigger: ATCACAGTGCCAGTATACTCGGTAGTCAATGTTTTGCCAGAACCAGCACTGAAGAAACTCCCAGACTCTAACTCGTTCACCAAGTCGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 90 bp CTCATGAGATCTTCCTTCATCTCGGCCACATCCTTTAAGATCTCCTaGCTGGAAGATAAAGAAGATGGTACTGATGGCTTAAGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LMRSSFISATSFKIS*LEDKEDGTDGLRAE
Trigger: CTCGGCCCTTAAGCCATCAGTACCATCTTCTTTATCTTCCAGCCAGGAGATCTTAAAGGATGTGGCCGAGATGAAGGAAGATCTCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 90 bp CACTCGAGATCTCTTTCACGATTTCGTTTTCTAACCCCTGACAACTaGTCACCACAGCCTCTGTCTTATCTGTCACTTCTCCAGAGCCTT +
Preference number: 5 (lower is better)
Translates to: HSRSLSRFRFLTPDN*SPQPLSYLSLLQSL
Trigger: AAGGCTCTGGAGAAGTGACAGATAAGACAGAGGCTGTGGTGACCAGTTGTCAGGGGTTAGAAAACGAAATCGTGAAAGAGATCTCGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp ACTAATCCATACACACATCCAGTACTCTTTTCCAATCAAGACTTCATTTCTGACCTCTGTGGCCAGGCTTaGGCTGGCGCCATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: TNPYTHPVLFSNQDFISDLCGQA*AGAIVQ
Trigger: CTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAG...GTCAGAAATGAAGTCTTGATTGGAAAAGAGTACTGGATGTGTGTATGGATTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CAA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATACTCTGTGGCCAGGCTTaGGCTGGCGCCATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: KERNSVYTLTVSLGPRKILCGQA*AGAIVQ
Trigger: CTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAG...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GCATGTAGTTCCCCGCTGTGGGAATGGCAATCACTTACATGTATTTTCTCTATATTGGTCATGACCTTGTaGCAGAGCCACGGCCAATGG +
Preference number: 5 (lower is better)
Translates to: ACSSPLWEWQSLTCIFSILVMTL*QSHGQW
Trigger: CCATTGGCCGTGGCTCTGCAACAAGGTCATGACCAA...TATAGAGAAAATACATGTAAGTGATTGCCATTCCCACAGCGGGGAACTACATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCAGGAGGGACACGACTaGGTCATGACCTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCQEGHD*VMTLLQ
Trigger: CTGCAACAAGGTCATGACCAAGTCGTGTCCCTCCTG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCATCCATTCTTGGTTTTaGAAAGGATGGGGGCGGATC +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLIHSWF*KGWGRI
Trigger: GATCCGCCCCCATCCTTTCAAAAACCAAGAATGGAT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATGGCGACAATCCATTCTaGGTTTTTGAAAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADGDNPF*VFERMG
Trigger: CCCCATCCTTTCAAAAACCAAGAATGGATTGTCGCC...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTTCAGGGCTTTGGCATaGGGGCTAGCTTTCTTATCC +
Preference number: 5 (lower is better)
Translates to: IIANIQESVKESRERWIPFRALA*GLAFLS
Trigger: GGATAAGAAAGCTAGCCCCAATGCCAAAGCCCTGAA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAAAGCCATTCAGGGCTTaGGCATTGGGGCTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVKPFRA*ALGLAF
Trigger: GAAAGCTAGCCCCAATGCCAAAGCCCTGAATGGCTT...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTGGGTGTACCCAGAAGTaGTTGCTGCATTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCGCTQK*LLHWGM
Trigger: CATCCCCCAATGCAGCAACAACTTCTGGGTACACCC...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATCCATCTGGTTCTTCTaGGCCGCGATGTGCAGTGGT +
Preference number: 5 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLSIWFF*AAMCSG
Trigger: ACCACTGCACATCGCGGCCAAGAAGAACCAGATGGA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCTCTTATTGCTCAGGTaGACATTCGCGTTTCTACTC +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLLLLLR*TFAFLL
Trigger: GAGTAGAAACGCGAATGTCAACCTGAGCAATAAGAG...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGGGTGTAGCCCATCTTaGTCTGAGCATCCACATGGG +
Preference number: 5 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLGCSPS*SEHPHG
Trigger: CCCATGTGGATGCTCAGACAAAGATGGGCTACACCC...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGTATCCATTCTTCGTCTaGGCATTAACTTTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: HGFLCRTLHLLSVHFSAGYPFFV*ALTFAE
Trigger: TTCTGCAAAAGTTAATGCCAAGACGAAGAATGGATA...CCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTATCCATTCTTCGTCTaGGCATTAACTTTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVYPFFV*ALTFAE
Trigger: TTCTGCAAAAGTTAATGCCAAGACGAAGAATGGATA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: IIANIQESVKESRERWIPSSCCP*RRSFCS
Trigger: TGAACAGAAGCTCCTACGCAAGGGACAGCATGATGA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTAAGTCTAGCTGCTGACGTAAGTGTACTTCCCACCTGGACTGACGTCACTGTCATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: LSLAADVSVLPTWTDVTVIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...GACAGTGACGTCAGTCCAGGTGGGAAGTACACTTACGTCAGCAGCTAGACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGGTAATCCCTTTGTaGTCTTTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPGVIPL*SLAPSG
Trigger: TCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCC...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATCGTGTCACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGTCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: NRVTDVWWKQLTHTPLLVSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...CACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGTGACACGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: LKNMASCVVHCTCSVCISFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCAAGGGACTTTTATCTaGGTCATGCTGGGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIQGTFI*VMLGKV
Trigger: GACTTTTCCCAGCATGACCAAGATAAAAGTCCCTTG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATATCCTGCTTCCTCTCTaGTGGACCAATCCGTCTTAT +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADILLPL*WTNPSY
Trigger: ATAAGACGGATTGGTCCACAAGAGAGGAAGCAGGAT...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS TCA 90 bp CTGTGTCATGAGAAAACTCAGCCGTGGTCGCAATGGAACACTCTGTaGCAGACTGGTCATTGTTTCCATTTTGAGCTGTTTCGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: LCHEKTQPWSQWNTL*QTGHCFHFELFRSE
Trigger: CTCAGAACGAAACAGCTCAAAATGGAAACAATGACCAGTCTGTCACAGAGTGTTCCATTGCGACCACGGCTGAGTTTTCTCATGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS GCA 90 bp CTCTTTGGATGGTACCAGAAGTTCCTCTATCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAAGGTGTAGGACCTATCCGAACTTAT +
Preference number: 5 (lower is better)
Translates to: LFGWYQKFLYHHAVP*VGASVQGVGPIRTY
Trigger: ATAAGTTCGGATAGGTCCTACACCTTGAACAGAAGCTCCTACGCAAGGGACAGCATGATGATAGAGGAACTTCTGGTACCATCCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CCA 90 bp GTTTCAAAGCCACTGTCAGACAAGGGACTTTTATCTTGGTCATGCTaGGAAAAGTCATCGGGAGACTCTAGGATGGCATCTGCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: VSKPLSDKGLLSWSC*EKSSGDSRMASAPK
Trigger: TTTTGGAGCAGATGCCATCCTAGAGTCTCCCGATGACTTTTCCCAGCATGACCAAGATAAAAGTCCCTTGTCTGACAGTGGCTTTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS CCA 90 bp TTGCCGGAGCCAGATTTGCTTGTAACGATCTCATTGCTTTGGGCATaGTCGGCTTTGAATACCGTAACATCATTTTGCACTGGCACTCTT +
Preference number: 5 (lower is better)
Translates to: LPEPDLLVTISLLWA*SALNTVTSFCTGTL
Trigger: AAGAGTGCCAGTGCAAAATGATGTTACGGTATTCAAAGCCGACCATGCCCAAAGCAATGAGATCGTTACAAGCAAATCTGGCTCCGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 90 bp CACCTTATAGCCTTCTCCCTGCACGTCATCCTGCTTCCTCTCTTGTaGACCAATCCGTCTTATTACTTTCCGAGTGATTTTTCTCGTGAT +
Preference number: 5 (lower is better)
Translates to: HLIAFSLHVILLPLL*TNPSYYFPSDFSRD
Trigger: ATCACGAGAAAAATCACTCGGAAAGTAATAAGACGGATTGGTCCACAAGAGAGGAAGCAGGATGACGTGCAGGGAGAAGGCTATAAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CCA 90 bp ATATCCGTCCGCTCACAAGGACTCTGCGGACCAATCTGGAAAAATTaGAGCCTCTCTTCCACAAAATCTCTCTTGCTCATGTCAATTGCA +
Preference number: 5 (lower is better)
Translates to: ISVRSQGLCGPIWKN*SLSSTKSLLLMSIA
Trigger: TGCAATTGACATGAGCAAGAGAGATTTTGTGGAAGAGAGGCTCCAATTTTTCCAGATTGGTCCGCAGAGTCCTTGTGAGCGGACGGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000185582.2
CDS-3UTR CAA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCTGCTCTTAAGTAACTaGCGTTGGCATCAGACTTTT +
Preference number: 5 (lower is better)
Translates to: LSRVKSLGTPVLGCICDILLLSN*RWHQTF
Trigger: AAAAGTCTGATGCCAACGCAAGTTACTTAAGAGCAG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTGCTCTTAAGTAACTaGCGTTGGCATCAGACTTTT +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFLLLSN*RWHQTF
Trigger: AAAAGTCTGATGCCAACGCAAGTTACTTAAGAGCAG...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ATGATCATAACCACCCTCCGATTACCCTCTCCAACACGTCCCTCCACCAACTTATTCTGGTTACAGATGTaGACGTCCACTCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: MIITTLRLPSPTRPSTNLFWLQM*TSTPFL
Trigger: CAAAAATGGAGTGGACGTCAACATCTGTAACCAGAA...TAAGTTGGTGGAGGGACGTGTTGGAGAGGGTAATCGGAGGGTGGTTATGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CAA 90 bp GACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAATCCATACTTGGTCATGACCTTGTaGCAGAGCCACGGCCAATGG +
Preference number: 5 (lower is better)
Translates to: DLSLKHWASSTTTNTNPYLVMTL*QSHGQW
Trigger: CCATTGGCCGTGGCTCTGCAACAAGGTCATGACCAA...GTATGGATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCATAGCTTCACCATATTaGCATTTCCTCGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFIASPY*HFLASR
Trigger: CCTCGAAGCGAGGAAATGCAAATATGGTGAAGCTAT...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATATAGCTTCACCATATTaGCATTTCCTCGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADIASPY*HFLASR
Trigger: CCTCGAAGCGAGGAAATGCAAATATGGTGAAGCTAT...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATCGGCTCATGGGCGACAATCCATTCTaGGTTTTTGAAAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: HFSAGNECEFPCFVDRLMGDNPF*VFERMG
Trigger: CCCCATCCTTTCAAAAACCAAGAATGGATTGTCGCC...CATGAGCCGATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCGACTCGGTTACGGCTaGAATAGATGCACCGTGCTT +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCRLGYG*NRCTVL
Trigger: AAGCACGGTGCATCTATTCAAGCCGTAACCGAGTCG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATCTGCAGCAGGAGACTaGCGACTTCAAGCTTTCCGT +
Preference number: 5 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKSAAGD*RLQAFR
Trigger: ACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAGA...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCCTCTTATTGCTCAGGTaGACATTCGCGTTTCTACTC +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLLLLLR*TFAFLL
Trigger: GAGTAGAAACGCGAATGTCAACCTGAGCAATAAGAG...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKSSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLNLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CTCCTCACGGTCAAATGTGAGCGGGAGGCTTTGAAGAAAGTCAAGCAAACCACTAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: LLTVKCEREALKKVKQTTNLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...AGTGGTTTGCTTGACTTTCTTCAAAGCCTCCCGCTCACATTTGACCGTGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: FFENDTKLLETGSEEHGFAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: LKNMASCVVHCTCSVCISIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACAATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATGGGGTAATCCCTTTGTaGTCTTTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDGVIPL*SLAPSG
Trigger: TCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCC...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TGCTGCCCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: CCPSSWVAQVLFCLSSLKGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...TTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: IIANIQESVKESRERWIPFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CAACTCATGGCTTTGGTGTCATCTGAACCTCTCAACCTGTTCCTGAAGTCACATTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: QLMALVSSEPLNLFLKSHFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...ATGTGACTTCAGGAACAGGTTGAGAGGTTCAGATGACACCAAAGCCATGAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTAAGTCTAGCTGCTGACGTAAGTGTACTTCCCACCTGGACTGACGTCACTGTCTCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: LSLAADVSVLPTWTDVTVSSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...GACAGTGACGTCAGTCCAGGTGGGAAGTACACTTACGTCAGCAGCTAGACTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp GACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTTCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: DVWWKQLTHTPLLVTIFLSSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...AAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCTCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: LSRVKSLGTPVLGCICDISSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCAAAGAGTCAGCCATCTaGCACAGTTCCTTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: IIANIQESVKESRERWIPKESAI*HSSFSE
Trigger: CTCTGAGAAGGAACTGTGCAAGATGGCTGACTCTTT...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTGTCTCAGCAGCAGACTaGGCAACATCTGGAGACATG +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCVSAAD*ATSGDM
Trigger: CATGTCTCCAGATGTTGCCAAGTCTGCTGCTGAGAC...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CAA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAGCTTCGCCCGGGCTTTaGACCTTAGGCTCTGACCTG +
Preference number: 5 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIASPGL*TLGSDL
Trigger: CAGGTCAGAGCCTAAGGTCAAAAGCCCGGGCGAAGC...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182269.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGCTTCGCCCGGGCTTTaGACCTTAGGCTCTGACCTG +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAASPGL*TLGSDL
Trigger: CAGGTCAGAGCCTAAGGTCAAAAGCCCGGGCGAAGC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182269.8
ENSMUST00000183261.8
CDS TCA 90 bp ATCACTGAGCTTTTCGGGGGCGCTGGCTTTCCTTACTTCATCGTCTaGCATATCGAGGACTTCATTCATCGTTTCTGGGACATTCATTTT +
Preference number: 5 (lower is better)
Translates to: ITELFGGAGFPYFIV*HIEDFIHRFWDIHF
Trigger: AAAATGAATGTCCCAGAAACGATGAATGAAGTCCTCGATATGTCAGACGATGAAGTAAGGAAAGCCAGCGCCCCCGAAAAGCTCAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000218680.2
CDS GCA 90 bp GACATATCGAGGACTTCATTCATCGTTTCTGGGACATTCATTTTGTaGTTCTCCGTGATGGTAGTGGTGGTCATAATTTCCTCCGTCACG +
Preference number: 5 (lower is better)
Translates to: DISRTSFIVSGTFIL*FSVMVVVVIISSVT
Trigger: CGTGACGGAGGAAATTATGACCACCACTACCATCACGGAGAAGCACAAAATGAATGTCCCAGAAACGATGAATGAAGTCCTCGATATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 90 bp GACGTGTTCCTTGAGGTACTTTCTTCCTCATCAGACAACTCCGATTaGATCTTTTTGTCTTCTTCAGTGAGGCGGTCCACAAGTTTTAGG +
Preference number: 5 (lower is better)
Translates to: DVFLEVLSSSSDNSD*IFLSSSVRRSTSFR
Trigger: CCTAAAACTTGTGGACCGCCTCACTGAAGAAGACAAAAAGATGCAATCGGAGTTGTCTGATGAGGAAGAAAGTACCTCAAGGAACACGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCATAGCTTCACCATATTaGCATTTCCTCGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: IIANIQESVKESRERWIPIASPY*HFLASR
Trigger: CCTCGAAGCGAGGAAATGCAAATATGGTGAAGCTAT...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGGCGACAATCCATTCTaGGTTTTTGAAAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVGDNPF*VFERMG
Trigger: CCCCATCCTTTCAAAAACCAAGAATGGATTGTCGCC...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAATTCAGGGCTTTGGCATaGGGGCTAGCTTTCTTATCC +
Preference number: 5 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKFRALA*GLAFLS
Trigger: GGATAAGAAAGCTAGCCCCAATGCCAAAGCCCTGAA...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLSSCCP*RRSFCS
Trigger: TGAACAGAAGCTCCTACGCAAGGGACAGCATGATGA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADNLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLNLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFNLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACTGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: YLFREPRKFSRFLSLAADCCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAACCSRV*STLSSV
Trigger: GACAGACGACAGGGTGGACAAAACCCTGGAGCAGCA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: FTELQNSSFGELFKFAAGSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAASCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: LSRVKSLGTPVLGCICDIGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCAACAGAGATTTGACCTaGTCTTCTGTCACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFNRDLT*SSVTSS
Trigger: TGAGGAAGTGACAGAAGACAAGGTCAAATCTCTGTT...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTGTCCAGGGTGAAGTCACTTGGGACGCCTGTCCTTGGATGCATTTGTGATATCCTCTACTTCTTCAAGTaGAATGTCCTCAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: LSRVKSLGTPVLGCICDILYFFK*NVLKQR
Trigger: TCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGAG...GATATCACAAATGCATCCAAGGACAGGCGTCCCAAGTGACTTCACCCTGGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCTGCAAGTGAAGACATaGCCAGTTCTGCTCGCTGAA +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCLQVKT*PVLLAE
Trigger: TTCAGCGAGCAGAACTGGCAATGTCTTCACTTGCAG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFSSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADSSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CCCTCCTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACATCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: PSSWVAQVLFCLSSLKMTSSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...TGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAGGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: FFENDTKLLETGSEEHGFSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTAAAACCTCCTGTACTTaGGGAATTTTGAACCATGTG +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFKTSCT*GILNHV
Trigger: CACATGGTTCAAAATTCCCAAAGTACAGGAGGTTTT...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAACCGTCAAAAACTTCATaGTCCCCTCGGTTATTGGGC +
Preference number: 5 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKPSKTS*SPRLLG
Trigger: GCCCAATAACCGAGGGGACAATGAAGTTTTTGACGG...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS GCA 90 bp CGAGTGATTTTTCTCGTGATGAGGTTGCCTTCTTCATCAGTAAATTaGTCTTCTGTGACAGATTCACCAGGGATGTTTTTGGCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RVIFLVMRLPSSSVN*SSVTDSPGMFLASS
Trigger: GGAGGAAGCCAAAAACATCCCTGGTGAATCTGTCACAGAAGAGCAATTTACTGATGAAGAAGGCAACCTCATCACGAGAAAAATCACTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS GCA 90 bp CTAATAATGACTTCAGTGGGTTCGGCTTGGTTACCTTTTTCGATGTaGACTTCTATAATGCGCTCCAGTTTGGGTTTCATTTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LIMTSVGSAWLPFSM*TSIMRSSLGFIWLS
Trigger: GGACAGCCAAATGAAACCCAAACTGGAGCGCATTATAGAAGTGCACATCGAAAAAGGTAACCAAGCCGAACCCACTGAAGTCATTATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTTGGTCATGACCTTGTaGCAGAGCCACGGCCAATGG +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAALVMTL*QSHGQW
Trigger: CCATTGGCCGTGGCTCTGCAACAAGGTCATGACCAA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp ACTACGACAAATACTAATCCATACACACATCCAGTACTCTTTTCCAATCAAGACCAGGAGGGACACGACTaGGTCATGACCTTGTTGCAG +
Preference number: 5 (lower is better)
Translates to: TTTNTNPYTHPVLFSNQDQEGHD*VMTLLQ
Trigger: CTGCAACAAGGTCATGACCAAGTCGTGTCCCTCCTG...GTCTTGATTGGAAAAGAGTACTGGATGTGTGTATGGATTAGTATTTGTCGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CAA 90 bp CTTCATCTACTACGACAAATACTAATCCATACACACATCCAGTACTCTTTTCCAACTCCACGTCCGCGTTaGTGTCATTCTGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: LHLLRQILIHTHIQYSFPTPRPR*CHSAGA
Trigger: TGCTCCTGCAGAATGACACAAACGCGGACGTGGAGT...TGGAAAAGAGTACTGGATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CAA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAAACTCCACGTCCGCGTTaGTGTCATTCTGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: LQIKSPMLQETVVFAKLETPRPR*CHSAGA
Trigger: TGCTCCTGCAGAATGACACAAACGCGGACGTGGAGT...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAAGTCTCTCCTCTCACATaGGTGGTGTTTGGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEVSPLT*VVFGEA
Trigger: AGCCTCCCCAAACACCACCAATGTGAGAGGAGAGAC...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGGGTGTAGCCCATCTTaGTCTGAGCATCCACATGGG +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAGCSPS*SEHPHG
Trigger: CCCATGTGGATGCTCAGACAAAGATGGGCTACACCC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAATGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: LQIKSPMLQETVVFAKLECGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: FFENDTKLLETGSEEHGFSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: IIANIQESVKESRERWIPNLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGAAGCTGCTGTCCTCCTTaGGTCAGAGGGGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: RFISFHLPVRFQERRRKGSCCPP*VRGARF
Trigger: AAACCTGGCCCCTCTGACCAAAGGAGGACAGCAGCT...TCCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTT +
Preference number: 5 (lower is better)
Translates to: KIYFISSSSEISGKKEKGAATGL*TGVSDL
Trigger: AAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGC...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTAAGTCTAGCTGCTGACGTAAGTGTACTTCCCACCTGGACTGACGTCACTGTCAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: LSLAADVSVLPTWTDVTVRVIFK*QTAVWG
Trigger: ACCCCAAACAGCTGTTTGCAACTTAAATATTACTCT...GACAGTGACGTCAGTCCAGGTGGGAAGTACACTTACGTCAGCAGCTAGACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFRVIFK*QTAVWG
Trigger: ACCCCAAACAGCTGTTTGCAACTTAAATATTACTCT...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ACTGACGTGTGGTGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTTCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: TDVWWKQLTHTPLLVTIFSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...AAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCACCACACGTCAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCAGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: LKNMASCVVHCTCSVCISGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTTCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPSSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAATCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: LQIKSPMLQETVVFAKLESSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: EGEREYRNILIPRTQKILSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAATAATGCGCTCCAGTTaGGGTTTCATTTGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKIMRSS*GFIWLS
Trigger: GGACAGCCAAATGAAACCCAAACTGGAGCGCATTAT...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183023.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTTGTTTTGGAAATGTaGACTGCTCACAAAACCCAT +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADLVLEM*TAHKTH
Trigger: ATGGGTTTTGTGAGCAGTCAACATTTCCAAAACAAG...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp CCGTGTGTTTTTGGTTTCAGGTTCTCCTTGATGCTCTGTTTCCCTATATCGTTTTTTTACACCTCCTGGTaGGAGCTCCTTTTCGTACTG +
Preference number: 5 (lower is better)
Translates to: PCVFGFRFSLMLCFPISFFYTSW*ELLFVL
Trigger: CAGTACGAAAAGGAGCTCCAACCAGGAGGTGTAAAA...AAACGATATAGGGAAACAGAGCATCAAGGAGAACCTGAAACCAAAAACACACGG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp TCCGTGTGTTTTTGGTTTCAGGTTCTCCTTGATGCTCTGTTTCCCTATATCGTTTCTTGCTCATGTCAATaGCACCACTGCGAGTCATCT +
Preference number: 5 (lower is better)
Translates to: SVCFWFQVLLDALFPYIVSCSCQ*HHCESS
Trigger: AGATGACTCGCAGTGGTGCAATTGACATGAGCAAGA...AACGATATAGGGAAACAGAGCATCAAGGAGAACCTGAAACCAAAAACACACGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCTTTCTCGTGATGAGGTaGCCTTCTTCATCAGTAAAT +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLFLVMR*PSSSVN
Trigger: ATTTACTGATGAAGAAGGCAACCTCATCACGAGAAA...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GTACACTGCACTTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCTTTCTCGTGATGAGGTaGCCTTCTTCATCAGTAAAT +
Preference number: 5 (lower is better)
Translates to: VHCTCSVCISVPGMNVSFFLVMR*PSSSVN
Trigger: ATTTACTGATGAAGAAGGCAACCTCATCACGAGAAA...GAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAAGTGCAGTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAGAGTTCACGTGTAGACTTGTCTCTGAAACACTGGGCTTCATCTACTACGACACTGCTCTTAAGTAACTaGCGTTGGCATCAGATTCTT +
Preference number: 5 (lower is better)
Translates to: ESSRVDLSLKHWASSTTTLLLSN*RWHQIL
Trigger: AAGAATCTGATGCCAACGCAAGTTACTTAAGAGCAG...TGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGACAAGTCTACACGTGAACTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS TCA 90 bp CCTCAGCCTCTACTTCTTCAAGTTGAATGTCCTCAAACAGAGATTTaGCCTTGTCTTCTGTCACTTCCTCATCAGGACCAGATTTTCCTT +
Preference number: 5 (lower is better)
Translates to: PQPLLLQVECPQTEI*PCLLSLPHQDQIFL
Trigger: AAGGAAAATCTGGTCCTGATGAGGAAGTGACAGAAGACAAGGTCAAATCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGAGGCTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS TCA 90 bp GCATCTAAACATGAAGAAGTAGGAAGGGCTTTGTGTTTCTCATATTaGCCAACCTGCCTCGGTTTACCTGTTTTACTGTCTGCCTTATGG +
Preference number: 5 (lower is better)
Translates to: ASKHEEVGRALCFSY*PTCLGLPVLLSALW
Trigger: CCATAAGGCAGACAGTAAAACAGGTAAACCGAGGCAGGTTGGTCAATATGAGAAACACAAAGCCCTTCCTACTTCTTCATGTTTAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 90 bp GGATGCTTTTTGGTCTCTCTAATAATGACTTCAGTGGGTTCGGCTTaGTTACCTTTTTCGATGTGCACTTCTATAATGCGCTCCAGTTTG +
Preference number: 5 (lower is better)
Translates to: GCFLVSLIMTSVGSA*LPFSMCTSIMRSSL
Trigger: CAAACTGGAGCGCATTATAGAAGTGCACATCGAAAAAGGTAACCAAGCCGAACCCACTGAAGTCATTATTAGAGAGACCAAAAAGCATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS-3UTR CAA 90 bp CTTCATCTACTACGACAAATACTAATCCATACACACATCCAGTACTCTTTTCCATTCGTAACCAAGACCTaGACCACTTCCGCTTGCCCA +
Preference number: 5 (lower is better)
Translates to: LHLLRQILIHTHIQYSFPFVTKT*TTSACP
Trigger: TGGGCAAGCGGAAGTGGTCAAGGTCTTGGTTACGAA...TGGAAAAGAGTACTGGATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CAA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAACGACTCGGTTACGGCTaGAATAGATGCACCGTGCTT +
Preference number: 5 (lower is better)
Translates to: LQIKSPMLQETVVFAKLERLGYG*NRCTVL
Trigger: AAGCACGGTGCATCTATTCAAGCCGTAACCGAGTCG...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCTCTTATTGCTCAGGTaGACATTCGCGTTTCTACTC +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCLLLLR*TFAFLL
Trigger: GAGTAGAAACGCGAATGTCAACCTGAGCAATAAGAG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTACTCTTATTGCTCAGGTaGACATTCGCGTTTCTACTC +
Preference number: 5 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLLLLLR*TFAFLL
Trigger: GAGTAGAAACGCGAATGTCAACCTGAGCAATAAGAG...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATG +
Preference number: 5 (lower is better)
Translates to: KIYFISSSSEISGKKEKGCGPRY*SVSPVM
Trigger: CATCACAGGGGACACTGACAAGTATCTCGGGCCACA...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: FFENDTKLLETGSEEHGFQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCTCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAASSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: FTELQNSSFGELFKFAAGSSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACTCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: YLFREPRKFSRFLSLAADSGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAATCAGGACCGATCTGGTaGCTTTCCTGCTTAATCCGG +
Preference number: 5 (lower is better)
Translates to: LQIKSPMLQETVVFAKLESGPIW*LSCLIR
Trigger: CCGGATTAAGCAGGAAAGCAACCAGATCGGTCCTGA...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCGGGGTAATCCCTTTGTaGTCTTTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: FFENDTKLLETGSEEHGFGVIPL*SLAPSG
Trigger: TCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCC...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATCTCAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: KQLTHTPLLVTIFLPADLRVIFK*QTAVWG
Trigger: ACCCCAAACAGCTGTTTGCAACTTAAATATTACTCT...GAGATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp CTGAAGAACATGGCTTCCTGTGTCGTACACTGCACTTGCTCAGTGTGCATTTCATCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: LKNMASCVVHCTCSVCISSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...TGAAATGCACACTGAGCAAGTGCAGTGTACGACACAGGAAGCCATGTTCTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TGGAAGCAGCTGACCCACACTCCACTCTTGGTGACTATTTTTCTTCCTGCTGATTCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: WKQLTHTPLLVTIFLPADSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...ATCAGCAGGAAGAAAAATAGTCACCAAGAGTGGAGTGTGGGTCAGCTGCTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS-3UTR CAA 90 bp ATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCCTCCTCCTGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: ILVCLLDLIIPSSAAPPPGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...AGGAGGAGGGGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGAGGTCTCCAGCTCCACTaGAAAGGAAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: EKGNIGIYLFREPRKFSRGLQLH*KGRVTI
Trigger: GATGGTCACCCTTCCTTTCAAGTGGAGCTGGAGACC...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAGGTCTCCAGCTCCACTaGAAAGGAAGGGTGACCATC +
Preference number: 5 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILGLQLH*KGRVTI
Trigger: GATGGTCACCCTTCCTTTCAAGTGGAGCTGGAGACC...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000092433.12
ENSMUST00000182207.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCCTCTACTTCTTCAAGTaGAATGTCCTCAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: IIANIQESVKESRERWIPLYFFK*NVLKQR
Trigger: TCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGAG...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCA +
Preference number: 5 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILSSSWR*SLALPS
Trigger: TGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCTATCCGAACTTATCTaGGGACTGGCAGAACGGGCT +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAALSELI*GLAERA
Trigger: AGCCCGTTCTGCCAGTCCCAAGATAAGTTCGGATAG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CATACATGTATACAATGGGTTATGATCATAACCACCCTCCGATTACCCTCTCCACTGCTCTTAAGTAACTaGCGTTGGCATCAGACTTTT +
Preference number: 5 (lower is better)
Translates to: HTCIQWVMIITTLRLPSPLLLSN*RWHQTF
Trigger: AAAAGTCTGATGCCAACGCAAGTTACTTAAGAGCAG...TGGAGAGGGTAATCGGAGGGTGGTTATGATCATAACCCATTGTATACATGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CAA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAACTGCTCTTAAGTAACTaGCGTTGGCATCAGACTTTT +
Preference number: 5 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKLLLSN*RWHQTF
Trigger: AAAAGTCTGATGCCAACGCAAGTTACTTAAGAGCAG...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp CTTCATCTACTACGACAAATACTAATCCATACACACATCCAGTACTCTTTTCCATCCACATGGCCTTCTTaGGAAGCAAGATGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: LHLLRQILIHTHIQYSFPSTWPS*EARWSA
Trigger: TGCACTCCATCTTGCTTCCAAAGAAGGCCATGTGGA...TGGAAAAGAGTACTGGATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CAA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTCCACATGGCCTTCTTaGGAAGCAAGATGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: FTELQNSSFGELFKFAAGSTWPS*EARWSA
Trigger: TGCACTCCATCTTGCTTCCAAAGAAGGCCATGTGGA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAAAGCCATTCAGGGCTTaGGCATTGGGGCTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILKPFRA*ALGLAF
Trigger: GAAAGCTAGCCCCAATGCCAAAGCCCTGAATGGCTT...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATCACATTGGTGGTGTTaGGGGAGGCTCCATGATGCA +
Preference number: 5 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILSHWWC*GRLHDA
Trigger: TGCATCATGGAGCCTCCCCAAACACCACCAATGTGA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGTATCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LFREPRKFSRFLSLAADVSSCCP*RRSFCS
Trigger: TGAACAGAAGCTCCTACGCAAGGGACAGCATGATGA...TACGTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp TTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGTACAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: LFREPRKFSRFLSLAADVQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...TACGTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGATCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCT +
Preference number: 5 (lower is better)
Translates to: RFISFHLPVRFQERRRKGSSSMP*RSSARS
Trigger: AGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGA...TCCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCNLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAAGGAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCGGGGTAATCCCTTTGTaGTCTTTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: EGEREYRNILIPRTQKILGVIPL*SLAPSG
Trigger: TCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCC...GAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCGGGGTAATCCCTTTGTaGTCTTTGGCTCCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAGVIPL*SLAPSG
Trigger: TCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCC...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ATAATTGCTAATATACAAGAGTCAGTGAAAGAGTCCCGAGAGCGCTGGATCCCCTCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: IIANIQESVKESRERWIPSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...GGGGATCCAGCGCTCTCGGGACTCTTTCACTGACTCTTGTATATTAGCAATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTTTCCCTATATCGTTTaGGGATTCCGGGAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: FFENDTKLLETGSEEHGFFPYIV*GFREVG
Trigger: CCCTACTTCCCGGAATCCCAAAACGATATAGGGAAA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTTCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCSSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTCCTGGGTGGCACAGGTGTTGTTTTGTCTGTCTTCTTTGAAAATGACACTAAAGTTACATTTGGGTCTTaGGATAGAGTCTTTGCTCAC +
Preference number: 5 (lower is better)
Translates to: LLGGTGVVLSVFFENDTKVTFGS*DRVFAH
Trigger: GTGAGCAAAGACTCTATCCAAAGACCCAAATGTAAC...TTTAGTGTCATTTTCAAAGAAGACAGACAAAACAACACCTGTGCCACCCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTATCCACAAAATCTCTCTaGCTCATGTCAATTGCACCA +
Preference number: 5 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLSTKSL*LMSIAP
Trigger: TGGTGCAATTGACATGAGCAAGAGAGATTTTGTGGA...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp GAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTGTGTCACAATCTGGAAAAATaGGAGCCTCTCTTCCACAAA +
Preference number: 5 (lower is better)
Translates to: ENDTKLLETGSEEHGFLCHNLEK*EPLFHK
Trigger: TTTGTGGAAGAGAGGCTCCAATTTTTCCAGATTGTG...ACACAGGAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACTATCCGAACTTATCTaGGGACTGGCAGAACGGGCT +
Preference number: 5 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILLSELI*GLAERA
Trigger: AGCCCGTTCTGCCAGTCCCAAGATAAGTTCGGATAG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATTTCTCGTGATGAGGTaGCCTTCTTCATCAGTAAAT +
Preference number: 5 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVFLVMR*PSSSVN
Trigger: ATTTACTGATGAAGAAGGCAACCTCATCACGAGAAA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CCGCTGTGGGAATGGCAATCACTTACATGTATTTTCTCTATAAGAGTTTATTATTCCACATGGCCTTCTTaGGAAGCAAGATGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: PLWEWQSLTCIFSIRVYYSTWPS*EARWSA
Trigger: TGCACTCCATCTTGCTTCCAAAGAAGGCCATGTGGA...ATAATAAACTCTTATAGAGAAAATACATGTAAGTGATTGCCATTCCCACAGCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS-3UTR CAA 90 bp TCTCTGAAACACTGGGCTTCATCTACTACGACAAATACTAATCCATACACACATATAGCTTCACCATATTaGCATTTCCTCGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: SLKHWASSTTTNTNPYTHIASPY*HFLASR
Trigger: CCTCGAAGCGAGGAAATGCAAATATGGTGAAGCTAT...ATGTGTGTATGGATTAGTATTTGTCGTAGTAGATGAAGCCCAGTGTTTCAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCATCCATTCTTGGTTTTaGAAAGGATGGGGGCGGATC +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAAIHSWF*KGWGRI
Trigger: GATCCGCCCCCATCCTTTCAAAAACCAAGAATGGAT...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp AATCTCAGGATTTTATCAGTCACAGTTCTTTCTTTCTTTCTCTCTCTCTCTCTCGGCGACAATCCATTCTaGGTTTTTGAAAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: NLRILSVTVLSFFLSLSLGDNPF*VFERMG
Trigger: CCCCATCCTTTCAAAAACCAAGAATGGATTGTCGCC...GAGAGAGAGAGAGAGAAAGAAAGAAAGAACTGTGACTGATAAAATCCTGAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTGGCGACAATCCATTCTaGGTTTTTGAAAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: FTELQNSSFGELFKFAAGGDNPF*VFERMG
Trigger: CCCCATCCTTTCAAAAACCAAGAATGGATTGTCGCC...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCCTCTTATTGCTCAGGTaGACATTCGCGTTTCTACTC +
Preference number: 5 (lower is better)
Translates to: FFENDTKLLETGSEEHGFLLLLR*TFAFLL
Trigger: GAGTAGAAACGCGAATGTCAACCTGAGCAATAAGAG...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTACAGAATGCACCGGGCTaGAGACCAGGTTCACATTAT +
Preference number: 5 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILQNAPG*RPGSHY
Trigger: ATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTG...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDRVIFK*QTAVWG
Trigger: ACCCCAAACAGCTGTTTGCAACTTAAATATTACTCT...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTGCTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTATCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: LLSVHFSAGNECEFPCFVSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...TACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CTCAGTGTGCATTTCAGTGCCGGGAATGAATGTGAGTTTCCATGCTTTGTAGATTCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: LSVHFSAGNECEFPCFVDSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...ATCTACAAAGCATGGAAACTCACATTCATTCCCGGCACTGAAATGCACACTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGCTGCAAGTGAAGACATaGCCAGTTCTGCTCGCTGAA +
Preference number: 5 (lower is better)
Translates to: KIYFISSSSEISGKKEKGLQVKT*PVLLAE
Trigger: TTCAGCGAGCAGAACTGGCAATGTCTTCACTTGCAG...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATTGGCCGGGACACTCTaGGGGATAGTTCTTGTTTTG +
Preference number: 5 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILLAGTL*GIVLVL
Trigger: CAAAACAAGAACTATCCCCAAGAGTGTCCCGGCCAA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAAATCCTGCTTCCTCTCTaGTGGACCAATCCGTCTTAT +
Preference number: 5 (lower is better)
Translates to: LQIKSPMLQETVVFAKLEILLPL*WTNPSY
Trigger: ATAAGACGGATTGGTCCACAAGAGAGGAAGCAGGAT...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTATCCTGCTTCCTCTCTaGTGGACCAATCCGTCTTAT +
Preference number: 5 (lower is better)
Translates to: FTELQNSSFGELFKFAAGILLPL*WTNPSY
Trigger: ATAAGACGGATTGGTCCACAAGAGAGGAAGCAGGAT...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCTTCTGGTTACAGATGTaGACGTCCACTCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: FFENDTKLLETGSEEHGFFWLQM*TSTPFL
Trigger: CAAAAATGGAGTGGACGTCAACATCTGTAACCAGAA...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTATAGCTTCACCATATTaGCATTTCCTCGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: FTELQNSSFGELFKFAAGIASPY*HFLASR
Trigger: CCTCGAAGCGAGGAAATGCAAATATGGTGAAGCTAT...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: FFENDTKLLETGSEEHGFNLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp CCCATAGGACAGGCAATAACAGCCTTGAATGACATTAAGCATTCATTAATACTAATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: PIGQAITALNDIKHSLILIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...TAGTATTAATGAATGCTTAATGTCATTCAAGGCTGTTATTGCCTGTCCTATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182884.8
CDS-3UTR CAA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACA +
Preference number: 5 (lower is better)
Translates to: FTELQNSSFGELFKFAAGIPLLS*APSGKT
Trigger: TGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGAT...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000092433.12
ENSMUST00000182269.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp ACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: TLTVSLGPRKIRRAVVNLRVIFK*QTAVWG
Trigger: ACCCCAAACAGCTGTTTGCAACTTAAATATTACTCT...TAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAACTGTCAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCCTGCTCTTAAGTAACTaGCGTTGGCATCAGACTTTT +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAALLLSN*RWHQTF
Trigger: AAAAGTCTGATGCCAACGCAAGTTACTTAAGAGCAG...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp ACTACGACAAATACTAATCCATACACACATCCAGTACTCTTTTCCAATCAAGACTTCTGGTTACAGATGTaGACGTCCACTCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: TTTNTNPYTHPVLFSNQDFWLQM*TSTPFL
Trigger: CAAAAATGGAGTGGACGTCAACATCTGTAACCAGAA...GTCTTGATTGGAAAAGAGTACTGGATGTGTGTATGGATTAGTATTTGTCGTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS-3UTR CAA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: KERNSVYTLTVSLGPRKINLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TACTTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACAACAGAGATTTGACCTaGTCTTCTGTCACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: YLFREPRKFSRFLSLAADNRDLT*SSVTSS
Trigger: TGAGGAAGTGACAGAAGACAAGGTCAAATCTCTGTT...GTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATATCTTCTATGACAAGCTaGCTGGTTTCTTCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: KERNSVYTLTVSLGPRKISSMTS*LVSSRD
Trigger: ATCTCTGGAAGAAACCAGCAAGCTTGTCATAGAAGA...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS TCA 90 bp TACTTTGGGAATTTTGAACCATGTGCATTTATCACCTTCATCGTCTaGCATATCGAGGACTTCATTCATCGTTTCTGGGACATTCATTTT +
Preference number: 5 (lower is better)
Translates to: YFGNFEPCAFITFIV*HIEDFIHRFWDIHF
Trigger: AAAATGAATGTCCCAGAAACGATGAATGAAGTCCTCGATATGTCAGACGATGAAGGTGATAAATGCACATGGTTCAAAATTCCCAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092431.12
CDS-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATTCTGGTTACAGATGTaGACGTCCACTCCATTTTTG +
Preference number: 5 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILFWLQM*TSTPFL
Trigger: CAAAAATGGAGTGGACGTCAACATCTGTAACCAGAA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS-3UTR CAA 90 bp GAGAAAGGGAATATAGGAATATACTTATTCCGAGAACCCAGAAAATTCTCAAGAAATCTGGCTGAAACGTaGGTTGTGAAAGACACACAA +
Preference number: 5 (lower is better)
Translates to: EKGNIGIYLFREPRKFSRNLAET*VVKDTQ
Trigger: TTGTGTGTCTTTCACAACCAACGTTTCAGCCAGATT...TCTTGAGAATTTTCTGGGTTCTCGGAATAAGTATATTCCTATATTCCCTTTCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp TTCTTTGAAAATGACACTAAATTACTTGAGACCGGGTCTGAAGAACATGGCTTCAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: FFENDTKLLETGSEEHGFRVIFK*QTAVWG
Trigger: ACCCCAAACAGCTGTTTGCAACTTAAATATTACTCT...GAAGCCATGTTCTTCAGACCCGGTCTCAAGTAATTTAGTGTCATTTTCAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTACAGATAAAATCTCCCATGTTGCAGGAGACTGTAGTGTTTGCAAAATTGGAACTCTACTTCTTCAAGTaGAATGTCCTCAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: LQIKSPMLQETVVFAKLELYFFK*NVLKQR
Trigger: TCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGAG...TTCCAATTTTGCAAACACTACAGTCTCCTGCAACATGGGAGATTTTATCTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000092433.12
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAGGGATAGTTCTTGTTTaGGAAATGTTGACTGCTCAC +
Preference number: 5 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILGIVLV*EMLTAH
Trigger: GTGAGCAGTCAACATTTCCAAAACAAGAACTATCCC...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182665.8
CDS-3UTR CAA 90 bp TTCACAGAACTACAGAATTCCTCGTTTGGGGAATTATTTAAATTTGCAGCAGGTTTTCTCGTGATGAGGTaGCCTTCTTCATCAGTAAAT +
Preference number: 5 (lower is better)
Translates to: FTELQNSSFGELFKFAAGFLVMR*PSSSVN
Trigger: ATTTACTGATGAAGAAGGCAACCTCATCACGAGAAA...ACCTGCTGCAAATTTAAATAATTCCCCAAACGAGGAATTCTGTAGTTCTGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000182269.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AATTTAGTAATTTTAGTGTGTCTTCTTGATTTGATCATTCCGTCCTCTGCTGCCAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: NLVILVCLLDLIIPSSAARVIFK*QTAVWG
Trigger: ACCCCAAACAGCTGTTTGCAACTTAAATATTACTCT...GGCAGCAGAGGACGGAATGATCAAATCAAGAAGACACACTAAAATTACTAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATAAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: KERNSVYTLTVSLGPRKIRVIFK*QTAVWG
Trigger: ACCCCAAACAGCTGTTTGCAACTTAAATATTACTCT...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp TTATTCCGAGAACCCAGAAAATTCTCAAGATTTTTAAGTCTAGCTGCTGACGTATCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: LFREPRKFSRFLSLAADVSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...TACGTCAGCAGCTAGACTTAAAAATCTTGAGAATTTTCTGGGTTCTCGGAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp AAAGAAAGGAACAGTGTTTATACCCTGACAGTTAGTTTGGGTCCGAGAAAAATATCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: KERNSVYTLTVSLGPRKISTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...TATTTTTCTCGGACCCAAACTAACTGTCAGGGTATAAACACTGTTCCTTTCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGGGGTCATGGAAAACATaGTTTTCATCTGCAAAGCTT +
Preference number: 5 (lower is better)
Translates to: KIYFISSSSEISGKKEKGGSWKT*FSSAKL
Trigger: AAGCTTTGCAGATGAAAACAATGTTTTCCATGACCC...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp AAGATTTATTTCATTTCATCTTCCAGTGAGATTTCAGGAAAGAAGGAGAAAGGGCTCTACTTCTTCAAGTaGAATGTCCTCAAACAGAGA +
Preference number: 5 (lower is better)
Translates to: KIYFISSSSEISGKKEKGLYFFK*NVLKQR
Trigger: TCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGAG...CCCTTTCTCCTTCTTTCCTGAAATCTCACTGGAAGATGAAATGAAATAAATCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182029.8
CDS-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTAAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILRVIFK*QTAVWG
Trigger: ACCCCAAACAGCTGTTTGCAACTTAAATATTACTCT...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS-3UTR CAA 90 bp GTTAGTTTGGGTCCGAGAAAAATAAGGCGAGCTGTTGTGAATTTAGTAATTTTATCCACACGTATTTGGTaGATTTCATCCACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: VSLGPRKIRRAVVNLVILSTRIW*ISSTEK
Trigger: TTTTTCAGTGGATGAAATCAACCAAATACGTGTGGA...TAAAATTACTAAATTCACAACAGCTCGCCTTATTTTTCTCGGACCCAAACTAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182269.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000183023.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CCA 72 bp GCCGCAGGTTGGGCGTGGCATCCCCCTTGTACCCATTaGACACGCCTTCTCCCGAGGGCGGGGGCACCGGAA +
Preference number: 6 (lower is better)
Translates to: AAGWAWHPPCTH*TRLLPRAGAPE
Trigger: TTCCGGTGCCCCCGCCCTCGGGAGAAGGCGTGTCCAATGGGTACAAGGGGGATGCCACGCCCAACCTGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CAA 72 bp AGCCGCAGGTTGGGCGTGGCATCCCCCTTGTACCCATaGGACACGCCTTCTCCCGAGGGCGGGGGCACCGGA +
Preference number: 6 (lower is better)
Translates to: SRRLGVASPLYP*DTPSPEGGGTG
Trigger: TCCGGTGCCCCCGCCCTCGGGAGAAGGCGTGTCCAATGGGTACAAGGGGGATGCCACGCCCAACCTGCGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CAA 90 bp CCTGTGATGCTGCAGAGGAGCCGCAGGTTGGGCGTGGCATCCCCCTaGTACCCATTGGACACGCCTTCTCCCGAGGGCGGGGGCACCGGA +
Preference number: 6 (lower is better)
Translates to: PVMLQRSRRLGVASP*YPLDTPSPEGGGTG
Trigger: TCCGGTGCCCCCGCCCTCGGGAGAAGGCGTGTCCAATGGGTACAAGGGGGATGCCACGCCCAACCTGCGGCTCCTCTGCAGCATCACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CAA 90 bp CTGCAGAGGAGCCGCAGGTTGGGCGTGGCATCCCCCTTGTACCCATaGGACACGCCTTCTCCCGAGGGCGGGGGCACCGGAATGGTCATG +
Preference number: 6 (lower is better)
Translates to: LQRSRRLGVASPLYP*DTPSPEGGGTGMVM
Trigger: CATGACCATTCCGGTGCCCCCGCCCTCGGGAGAAGGCGTGTCCAATGGGTACAAGGGGGATGCCACGCCCAACCTGCGGCTCCTCTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS TCA 72 bp GCTGGAGTCACTGGCCTCGGCACCGGGAGGGACTGGTaGTGGGGGTTGCACTCGGATGACTGGCTCGGCCAA +
Preference number: 6 (lower is better)
Translates to: AGVTGLGTGRDW*WGLHSDDWLGQ
Trigger: TTGGCCGAGCCAGTCATCCGAGTGCAACCCCCATCACCAGTCCCTCCCGGTGCCGAGGCCAGTGACTCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 72 bp CACTTTCGCGGAGGGATGATGATCCGCATCCCGTGGTaGCGGCTTCCTCGCATGGAGCCCCCTCTCGCGTCC +
Preference number: 6 (lower is better)
Translates to: HFRGGMMIRIPW*RLPRMEPPLAS
Trigger: GGACGCGAGAGGGGGCTCCATGCGAGGAAGCCGCCACCACGGGATGCGGATCATCATCCCTCCGCGAAAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 23 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CCA 72 bp CTGCGGTCTCAGTGGCTCTGCCTGCCGACCGTCGTTTaGGATCCCGGGCACACTCGCCCAGCACTGAGCACA +
Preference number: 6 (lower is better)
Translates to: LRSQWLCLPTVV*DPGHTRPALST
Trigger: TGTGCTCAGTGCTGGGCGAGTGTGCCCGGGATCCCAAACGACGGTCGGCAGGCAGAGCCACTGAGACCGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 72 bp TCTGCGGTCTCAGTGGCTCTGCCTGCCGACCGTCGTTaGGGATCCCGGGCACACTCGCCCAGCACTGAGCAC +
Preference number: 6 (lower is better)
Translates to: SAVSVALPADRR*GSRAHSPSTEH
Trigger: GTGCTCAGTGCTGGGCGAGTGTGCCCGGGATCCCAAACGACGGTCGGCAGGCAGAGCCACTGAGACCGCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS GCA 72 bp CTGGGAAGGAGGCCTGGACGAGGGGCACGGTGGTGCTaGTCAGAATCCCACCCTCAGGACCGATCTGGTTGC +
Preference number: 6 (lower is better)
Translates to: LGRRPGRGARWC*SESHPQDRSGC
Trigger: GCAACCAGATCGGTCCTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCCAGGCCTCCTTCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS GCA 72 bp CCTCTGGGAAGGAGGCCTGGACGAGGGGCACGGTGGTaGTGCTCAGAATCCCACCCTCAGGACCGATCTGGT +
Preference number: 6 (lower is better)
Translates to: PLGRRPGRGARW*CSESHPQDRSG
Trigger: ACCAGATCGGTCCTGAGGGTGGGATTCTGAGCAGCACCACCGTGCCCCTCGTCCAGGCCTCCTTCCCAGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS GCA 72 bp CTGGCCTCGGCACCGGGAGGGACTGGTGATGGGGGTTaGACTCGGATGACTGGCTCGGCCAACTGGTACTTG +
Preference number: 6 (lower is better)
Translates to: LASAPGGTGDGG*TRMTGSANWYL
Trigger: CAAGTACCAGTTGGCCGAGCCAGTCATCCGAGTGCAACCCCCATCACCAGTCCCTCCCGGTGCCGAGGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 72 bp GTACACTTTCGCGGAGGGATGATGATCCGCATCCCGTaGTGGCGGCTTCCTCGCATGGAGCCCCCTCTCGCG +
Preference number: 6 (lower is better)
Translates to: VHFRGGMMIRIP*WRLPRMEPPLA
Trigger: CGCGAGAGGGGGCTCCATGCGAGGAAGCCGCCACCACGGGATGCGGATCATCATCCCTCCGCGAAAGTGTAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 23 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS TCA 72 bp GGTCATGACCTTGTTGCAGAGCCACGGCCAATGGCGTaGAGCCGTCCTCTGTGGCCAGGCTTTGGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: GHDLVAEPRPMA*SRPLWPGFGWR
Trigger: GCGCCAGCCAAAGCCTGGCCACAGAGGACGGCTTCACGCCATTGGCCGTGGCTCTGCAACAAGGTCATGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS GCA 72 bp CAGGAGCAGCGACACCATGTCCACGTGCCCTTCCTGTaGCGCAAGATGGACGGACGCAATCCCTTGCCGGGT +
Preference number: 6 (lower is better)
Translates to: QEQRHHVHVPFL*RKMDGRNPLPG
Trigger: ACCCGGCAAGGGATTGCGTCCGTCCATCTTGCGGCACAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 72 bp TCCCGTGTACTCTCTCAGGCAGGGACGGGGCGTGACTaGCCGCAGCCTGCCTGGCTTCTCGTATTTCCTCAG +
Preference number: 6 (lower is better)
Translates to: SRVLSQAGTGRD*PQPAWLLVFPQ
Trigger: CTGAGGAAATACGAGAAGCCAGGCAGGCTGCGGCCAGTCACGCCCCGTCCCTGCCTGAGAGAGTACACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp GAGGTGCCTCCTGTGATGCTGCAGAGGAGCCGCAGGTaGGGCGTGGCATCCCCCTTGTACCCATTGGACACG +
Preference number: 6 (lower is better)
Translates to: EVPPVMLQRSRR*GVASPLYPLDT
Trigger: CGTGTCCAATGGGTACAAGGGGGATGCCACGCCCAACCTGCGGCTCCTCTGCAGCATCACAGGAGGCACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CAA 72 bp GGCGTGTTAGAGGGAGAGCTGGATAAGGAGCCTGACTaGGCCGGCCCGGGCACTGTGATTGGAGCCGTGGTC +
Preference number: 6 (lower is better)
Translates to: GVLEGELDKEPD*AGPGTVIGAVV
Trigger: GACCACGGCTCCAATCACAGTGCCCGGGCCGGCCAAGTCAGGCTCCTTATCCAGCTCTCCCTCTAACACGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp GAAGCTGACGGCGTGTTAGAGGGAGAGCTGGATAAGGAGCCTGACTaGGCCGGCCCGGGCACTGTGATTGGAGCCGTGGTCCAGGACTGG +
Preference number: 6 (lower is better)
Translates to: EADGVLEGELDKEPD*AGPGTVIGAVVQDW
Trigger: CCAGTCCTGGACCACGGCTCCAATCACAGTGCCCGGGCCGGCCAAGTCAGGCTCCTTATCCAGCTCTCCCTCTAACACGCCGTCAGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp GTCCACGTGCCCTTCCTGTGCCGCAAGATGGACGGACGCAATCCCTaGCCGGGTAACCGCGTTTGCATCAGCACCGTACTCCAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: VHVPFLCRKMDGRNP*PGNRVCISTVLQQG
Trigger: TCCCTGCTGGAGTACGGTGCTGATGCAAACGCGGTTACCCGGCAAGGGATTGCGTCCGTCCATCTTGCGGCACAGGAAGGGCACGTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS TCA 72 bp CTGTTGGACCTACTGGGTGCCTTCCTGTCCTCAGCCTaGGGGACACTTTGTCCATCCGGGCCACGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: LLDLLGAFLSSA*GTLCPSGPRCL
Trigger: CAGGCAGCGTGGCCCGGATGGACAAAGTGTCCCTCAGGCTGAGGACAGGAAGGCACCCAGTAGGTCCAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 72 bp CCTACTTTTCTAGTCTGCGGTCTCAGTGGCTCTGCCTaGCGACCGTCGTTTGGGATCCCGGGCACACTCGCC +
Preference number: 6 (lower is better)
Translates to: PTFLVCGLSGSA*RPSFGIPGTLA
Trigger: GGCGAGTGTGCCCGGGATCCCAAACGACGGTCGGCAGGCAGAGCCACTGAGACCGCAGACTAGAAAAGTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 72 bp CAGGCGGTCATCCGCGTAAACGCTTCGCCCGGGCTTTaGACCTGCTTAGGCTCTGACCTGGTGGACCCCTCT +
Preference number: 6 (lower is better)
Translates to: QAVIRVNASPGL*TCLGSDLVDPS
Trigger: AGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGTCAAAAGCCCGGGCGAAGCGTTTACGCGGATGACCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183169.8
CDS CAA 90 bp CAGAGCCACGGCCAATGGCGTGAAGCCGTCCTCTGTGGCCAGGCTTaGGCTGGCGCCATTGTCCAGAAGAAACCTGACGACTTCCAGGTG +
Preference number: 6 (lower is better)
Translates to: QSHGQWREAVLCGQA*AGAIVQKKPDDFQV
Trigger: CACCTGGAAGTCGTCAGGTTTCTTCTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAGGACGGCTTCACGCCATTGGCCGTGGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS TCA 72 bp CACCGGGAGGGACTGGTGATGGGGGTTGCACTCGGATaGCTGGCTCGGCCAACTGGTACTTGTCAGACTCGT +
Preference number: 6 (lower is better)
Translates to: HREGLVMGVALG*LARPTGTCQTR
Trigger: ACGAGTCTGACAAGTACCAGTTGGCCGAGCCAGTCATCCGAGTGCAACCCCCATCACCAGTCCCTCCCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS TCA 72 bp TGGATAAGGAGCCTGACTTGGCCGGCCCGGGCACTGTaGTTGGAGCCGTGGTCCAGGACTGGTATGGTCTTG +
Preference number: 6 (lower is better)
Translates to: WIRSLTWPARAL*LEPWSRTGMVL
Trigger: CAAGACCATACCAGTCCTGGACCACGGCTCCAATCACAGTGCCCGGGCCGGCCAAGTCAGGCTCCTTATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS TCA 72 bp GACTTCTCCAGAGAGCCACTACAGGCTGTGCCTTCCTaGCACTCTCCGTTGCTCGGGATGCTGGGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: DFSREPLQAVPS*HSPLLGMLGLG
Trigger: CCCCAACCCCAGCATCCCGAGCAACGGAGAGTGTCAGGAAGGCACAGCCTGTAGTGGCTCTCTGGAGAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 72 bp TCTACCACCTGCTCATGGCCACTTCTCGCCCCACAGTaGAACGGAGTCAGACCGTCCCTGGTCTTGGCATCG +
Preference number: 6 (lower is better)
Translates to: STTCSWPLLAPQ*NGVRPSLVLAS
Trigger: CGATGCCAAGACCAGGGACGGTCTGACTCCGTTGCACTGTGGGGCGAGAAGTGGCCATGAGCAGGTGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp CCTTCCTGTGCCGCAAGATGGACGGACGCAATCCCTTaGCGGGTAACCGCGTTTGCATCAGCACCGTACTCC +
Preference number: 6 (lower is better)
Translates to: PSCAARWTDAIP*RVTAFASAPYS
Trigger: GGAGTACGGTGCTGATGCAAACGCGGTTACCCGGCAAGGGATTGCGTCCGTCCATCTTGCGGCACAGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp AGCCACTACAGGCTGTGCCTTCCTGACACTCTCCGTTaGTCGGGATGCTGGGGTTGGGGTCGACTGAAGGTG +
Preference number: 6 (lower is better)
Translates to: SHYRLCLPDTLR*SGCWGWGRLKV
Trigger: CACCTTCAGTCGACCCCAACCCCAGCATCCCGAGCAACGGAGAGTGTCAGGAAGGCACAGCCTGTAGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 72 bp CAGCTGCCGACTTCTCCAGAGAGCCACTACAGGCTGTaGCTTCCTGACACTCTCCGTTGCTCGGGATGCTGG +
Preference number: 6 (lower is better)
Translates to: QLPTSPESHYRL*LPDTLRCSGCW
Trigger: CCAGCATCCCGAGCAACGGAGAGTGTCAGGAAGGCACAGCCTGTAGTGGCTCTCTGGAGAAGTCGGCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp CCTTCTCCACGGTCACCTGCCTTAGTGGGGCTGATTTaGGCTCCTCCTCCTCCGACTCCTCTGAAACCTCGG +
Preference number: 6 (lower is better)
Translates to: PSPRSPALVGLI*APPPPTPLKPR
Trigger: CCGAGGTTTCAGAGGAGTCGGAGGAGGAGGAGCCCAAATCAGCCCCACTAAGGCAGGTGACCGTGGAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 72 bp CTGGTTGGTACAAGGACTCATCATCGCTGGAGTCACTaGCCTCGGCACCGGGAGGGACTGGTGATGGGGGTT +
Preference number: 6 (lower is better)
Translates to: LVGTRTHHRWSH*PRHREGLVMGV
Trigger: AACCCCCATCACCAGTCCCTCCCGGTGCCGAGGCCAGTGACTCCAGCGATGATGAGTCCTTGTACCAACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp GGCCAATGGCGTGAAGCCGTCCTCTGTGGCCAGGCTTaGGCTGGCGCCATTGTCCAGAAGAAACCTGACGAC +
Preference number: 6 (lower is better)
Translates to: GQWREAVLCGQA*AGAIVQKKPDD
Trigger: GTCGTCAGGTTTCTTCTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAGGACGGCTTCACGCCATTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS CAA 72 bp CCCTTCCTGTGCCGCAAGATGGACGGACGCAATCCCTaGCCGGGTAACCGCGTTTGCATCAGCACCGTACTC +
Preference number: 6 (lower is better)
Translates to: PFLCRKMDGRNP*PGNRVCISTVL
Trigger: GAGTACGGTGCTGATGCAAACGCGGTTACCCGGCAAGGGATTGCGTCCGTCCATCTTGCGGCACAGGAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS TCA 72 bp GGAGCACTGATCTGTCCGGGTGTCTGCCTTCCAGGGTaGAAAACTGGGCCCCTGACTTGGGATCGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: GALICPGVCLPG*KTGPLTWDRPS
Trigger: AGAAGGCCGATCCCAAGTCAGGGGCCCAGTTTTTCACCCTGGAAGGCAGACACCCGGACAGATCAGTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS GCA 72 bp CTGAGCCCCATCTTGGACCAGATACCGCACCACTTCTaGTTGTCCGGACCGAGCCGCCATATGCAATGCCGT +
Preference number: 6 (lower is better)
Translates to: LSPILDQIPHHF*LSGPSRHMQCR
Trigger: ACGGCATTGCATATGGCGGCTCGGTCCGGACAAGCAGAAGTGGTGCGGTATCTGGTCCAAGATGGGGCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp ATGGACGGACGCAATCCCTTGCCGGGTAACCGCGTTTaGATCAGCACCGTACTCCAGCAGGGACGTGGCTAT +
Preference number: 6 (lower is better)
Translates to: MDGRNPLPGNRV*ISTVLQQGRGY
Trigger: ATAGCCACGTCCCTGCTGGAGTACGGTGCTGATGCAAACGCGGTTACCCGGCAAGGGATTGCGTCCGTCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp GCGTTTCTACTCAGGAGCAGCGACACCATGTCCACGTaGCCTTCCTGTGCCGCAAGATGGACGGACGCAATC +
Preference number: 6 (lower is better)
Translates to: AFLLRSSDTMST*PSCAARWTDAI
Trigger: GATTGCGTCCGTCCATCTTGCGGCACAGGAAGGGCACGTGGACATGGTGTCGCTGCTCCTGAGTAGAAACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp AGGGACCCTGTTCTCAGGGCTGTTGGACCTACTGGGTaGCTTCCTGTCCTCAGCCTGAGGGACACTTTGTCC +
Preference number: 6 (lower is better)
Translates to: RDPVLRAVGPTG*LPVLSLRDTLS
Trigger: GGACAAAGTGTCCCTCAGGCTGAGGACAGGAAGGCACCCAGTAGGTCCAACAGCCCTGAGAACAGGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 72 bp AGGCTGTGCCTTCCTGACACTCTCCGTTGCTCGGGATaGTGGGGTTGGGGTCGACTGAAGGTGCCACTACAT +
Preference number: 6 (lower is better)
Translates to: RLCLPDTLRCSG*WGWGRLKVPLH
Trigger: ATGTAGTGGCACCTTCAGTCGACCCCAACCCCAGCATCCCGAGCAACGGAGAGTGTCAGGAAGGCACAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp GAAAGCCGAGGGGGCTGCAGAAACATACGACCTGAGTaGGGAAAAGGGCATGGCTGTCGTGGTAGAGAGCGC +
Preference number: 6 (lower is better)
Translates to: ESRGGCRNIRPE*GKGHGCRGRER
Trigger: GCGCTCTCTACCACGACAGCCATGCCCTTTTCCCCACTCAGGTCGTATGTTTCTGCAGCCCCCTCGGCTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp AGCCCCATCTTGGACCAGATACCGCACCACTTCTGCTaGTCCGGACCGAGCCGCCATATGCAATGCCGTCTC +
Preference number: 6 (lower is better)
Translates to: SPILDQIPHHFC*SGPSRHMQCRL
Trigger: GAGACGGCATTGCATATGGCGGCTCGGTCCGGACAAGCAGAAGTGGTGCGGTATCTGGTCCAAGATGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 90 bp AATGGCGTGAAGCCGTCCTCTGTGGCCAGGCTTTGGCTGGCGCCATaGTCCAGAAGAAACCTGACGACTTCCAGGTGGTTCTCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: NGVKPSSVARLWLAP*SRRNLTTSRWFSWA
Trigger: AGCCCAGGAGAACCACCTGGAAGTCGTCAGGTTTCTTCTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAGGACGGCTTCACGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS CAA 90 bp CCACTTCTCGCCCCACAGTGCAACGGAGTCAGACCGTCCCTGGTCTaGGCATCGATCTTCGCACCCCGGTCCAGCAATAGCTTCACCATA +
Preference number: 6 (lower is better)
Translates to: PLLAPQCNGVRPSLV*ASIFAPRSSNSFTI
Trigger: TATGGTGAAGCTATTGCTGGACCGGGGTGCGAAGATCGATGCCAAGACCAGGGACGGTCTGACTCCGTTGCACTGTGGGGCGAGAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 90 bp GTTGGACCTACTGGGTGCCTTCCTGTCCTCAGCCTGAGGGACACTTaGTCCATCCGGGCCACGCTGCCTGGCCTTAACCCATTCATCGTT +
Preference number: 6 (lower is better)
Translates to: VGPTGCLPVLSLRDT*SIRATLPGLNPFIV
Trigger: AACGATGAATGGGTTAAGGCCAGGCAGCGTGGCCCGGATGGACAAAGTGTCCCTCAGGCTGAGGACAGGAAGGCACCCAGTAGGTCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 90 bp GTGGTGGTGACGGTGACACGGGTGGATCTTACCTTTACTGGCAACTaGGATGGAGGCTGTTTGGCCTTGCCTCTCTCTGGCTGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: VVVTVTRVDLTFTGN*DGGCLALPLSGCPR
Trigger: GCGAGGGCAGCCAGAGAGAGGCAAGGCCAAACAGCCTCCATCCAAGTTGCCAGTAAAGGTAAGATCCACCCGTGTCACCGTCACCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 90 bp GTGGTGGTAGTGGTGGTGGTGGTGGTGGTAGTGGTGGTGGAGGTGTaGGTGGTGGTGACGGTGACACGGGTGGATCTTACCTTTACTGGC +
Preference number: 6 (lower is better)
Translates to: VVVVVVVVVVVVVEV*VVVTVTRVDLTFTG
Trigger: GCCAGTAAAGGTAAGATCCACCCGTGTCACCGTCACCACCACCAACACCTCCACCACCACTACCACCACCACCACCACCACTACCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 90 bp TTCTACCTGAGCCCCATCTTGGACCAGATACCGCACCACTTCTGCTaGTCCGGACCGAGCCGCCATATGCAATGCCGTCTCTCCTCTCAC +
Preference number: 6 (lower is better)
Translates to: FYLSPILDQIPHHFC*SGPSRHMQCRLSSH
Trigger: GTGAGAGGAGAGACGGCATTGCATATGGCGGCTCGGTCCGGACAAGCAGAAGTGGTGCGGTATCTGGTCCAAGATGGGGCTCAGGTAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 90 bp GAGGTCTCAGCAGCAGACTTGGCAACATCTGGAGACATGGCCGACTaGTGTTCAAACAGCCCTGCCAGCTCTTTGGAAGGGTCTCGCCCG +
Preference number: 6 (lower is better)
Translates to: EVSAADLATSGDMAD*CSNSPASSLEGSRP
Trigger: CGGGCGAGACCCTTCCAAAGAGCTGGCAGGGCTGTTTGAACACAAGTCGGCCATGTCTCCAGATGTTGCCAAGTCTGCTGCTGAGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS CAA 90 bp GACAGTTCTTTTGGCTTCCTCTGGAGGCTGGTCATCCTCGCTCTGTaGGGTAGGGACCCTGTTCTCAGGGCTGTTGGACCTACTGGGTGC +
Preference number: 6 (lower is better)
Translates to: DSSFGFLWRLVILAL*GRDPVLRAVGPTGC
Trigger: GCACCCAGTAGGTCCAACAGCCCTGAGAACAGGGTCCCTACCCAACAGAGCGAGGATGACCAGCCTCCAGAGGAAGCCAAAAGAACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS TCA 72 bp GTGTCGTTCTCGAGCAGGAGGGACACGACTTGGTCATaGCCTTGTTGCAGAGCCACGGCCAATGGCGTGAAG +
Preference number: 6 (lower is better)
Translates to: VSFSSRRDTTWS*PCCRATANGVK
Trigger: CTTCACGCCATTGGCCGTGGCTCTGCAACAAGGTCATGACCAAGTCGTGTCCCTCCTGCTCGAGAACGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS TCA 72 bp GTGGGCAGCTATGTGGAGCGGGGTGAAGCCACTCTTTaGCTCCACGTCCGCGTTTGTGTCATTCTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: VGSYVERGEATL*LHVRVCVILQE
Trigger: CTCCTGCAGAATGACACAAACGCGGACGTGGAGTCAAAGAGTGGCTTCACCCCGCTCCACATAGCTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS TCA 72 bp CAGCAGCCGCTCGGTTTAACAGCAACGTGGCCACATTaGTGTTCCCATAGTGGGCAGCTATGTGGAGCGGGG +
Preference number: 6 (lower is better)
Translates to: QQPLGLTATWPH*CSHSGQLCGAG
Trigger: CCCCGCTCCACATAGCTGCCCACTATGGGAACATCAATGTGGCCACGTTGCTGTTAAACCGAGCGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS TCA 72 bp CAGTGGTGTATAGCCATTCTTTGCGGCTGCGTGGGGTaGGGCTCCCTGGTCCAAGAGCAGAAGGGCCACTTT +
Preference number: 6 (lower is better)
Translates to: QWCIAILCGCVG*GSLVQEQKGHF
Trigger: AAAGTGGCCCTTCTGCTCTTGGACCAGGGAGCCTCACCCCACGCAGCCGCAAAGAATGGCTATACACCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS TCA 72 bp CGTAAACGCTTCGCCCGGGCTTTTGACCTTAGGCTCTaGCCTGGTGGACCCCTCTTCTTCCTGGAGGTTGAG +
Preference number: 6 (lower is better)
Translates to: RKRFARAFDLRL*PGGPLFFLEVE
Trigger: CTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGGTCAAAAGCCCGGGCGAAGCGTTTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182269.8
ENSMUST00000183261.8
CDS TCA 72 bp AAACGCTTCGCCCGGGCTTTTGACCTGCTTAGGCTCTaGCCTGGTGGACCCCTCTTCTTCCTGGAGGTTGAG +
Preference number: 6 (lower is better)
Translates to: KRFARAFDLLRL*PGGPLFFLEVE
Trigger: CTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGTCAAAAGCCCGGGCGAAGCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183169.8
CDS TCA 72 bp TGGGACACTTTGCCACGCATGTACTCACCCGTGCGGTaGAGTCCACAGCAGCCGCTCGGTTTAACAGCAACG +
Preference number: 6 (lower is better)
Translates to: WDTLPRMYSPVR*SPQQPLGLTAT
Trigger: CGTTGCTGTTAAACCGAGCGGCTGCTGTGGACTTCACCGCACGGGTGAGTACATGCGTGGCAAAGTGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS GCA 72 bp CCGCTCTTCCCTGCGGCATCGGGAGACGCACTCTTCTaGAGCAGGAGACTTGCGACTTCAAGCTTTCCGTAT +
Preference number: 6 (lower is better)
Translates to: PLFPAASGDALF*SRRLATSSFPY
Trigger: ATACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAGAAGAGTGCGTCTCCCGATGCCGCAGGGAAGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp TCCTCTGCGGTTACCACTGGAGGTCCACCTGTTGGATaGTCTATGTTTCCCTGGGAAGGCACCAGCCCGTCA +
Preference number: 6 (lower is better)
Translates to: SSAVTTGGPPVG*SMFPWEGTSPS
Trigger: TGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCATCCAACAGGTGGACCTCCAGTGGTAACCGCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS GCA 72 bp CTCACGTCACGATCTGTTTCCTTCTCCACGGTCACCTaGCTTAGTGGGGCTGATTTGGGCTCCTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LTSRSVSFSTVT*LSGADLGSSSS
Trigger: GGAGGAGGAGGAGCCCAAATCAGCCCCACTAAGGCAGGTGACCGTGGAGAAGGAAACAGATCGTGACGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 72 bp GCTGGAAAGGGTTGGGTGGTGTGCAGTACAACCCCATaGGGGTCTCCAGCTCCACTTGAAAGGAAGGGTGAC +
Preference number: 6 (lower is better)
Translates to: AGKGWVVCSTTP*GSPAPLERKGD
Trigger: GTCACCCTTCCTTTCAAGTGGAGCTGGAGACCCCCATGGGGTTGTACTGCACACCACCCAACCCTTTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CCA 72 bp ACTGGAGGTCCACCTGTTGGATGCTCTATGTTTCCCTaGGAAGGCACCAGCCCGTCACTCAGTCTACTGGGG +
Preference number: 6 (lower is better)
Translates to: TGGPPVGCSMFP*EGTSPSLSLLG
Trigger: CCCCAGTAGACTGAGTGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCATCCAACAGGTGGACCTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CCA 72 bp AGTGTCCTCTGCGGTTACCACTGGAGGTCCACCTGTTaGATGCTCTATGTTTCCCTGGGAAGGCACCAGCCC +
Preference number: 6 (lower is better)
Translates to: SVLCGYHWRSTC*MLYVSLGRHQP
Trigger: GGGCTGGTGCCTTCCCAGGGAAACATAGAGCATCCAACAGGTGGACCTCCAGTGGTAACCGCAGAGGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 72 bp AAGCCGTCCTCTGTGGCCAGGCTTTGGCTGGCGCCATaGTCCAGAAGAAACCTGACGACTTCCAGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: KPSSVARLWLAP*SRRNLTTSRWF
Trigger: GAACCACCTGGAAGTCGTCAGGTTTCTTCTGGACAATGGCGCCAGCCAAAGCCTGGCCACAGAGGACGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS CAA 72 bp GTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTaGGCGTCTCGTTCTGCCAACTCTGACACAGGTCCT +
Preference number: 6 (lower is better)
Translates to: VFELALGTLGFH*ASRSANSDTGP
Trigger: AGGACCTGTGTCAGAGTTGGCAGAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182207.8
ENSMUST00000182692.8
CDS CAA 72 bp CTCTTCCTGATTGTGCCACTGTTCAGGCGCCTGGTCTaGGCATCGATCTTCGCACCCCGGTCCAGCAATAGC +
Preference number: 6 (lower is better)
Translates to: LFLIVPLFRRLV*ASIFAPRSSNS
Trigger: GCTATTGCTGGACCGGGGTGCGAAGATCGATGCCAAGACCAGGCGCCTGAACAGTGGCACAATCAGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS CAA 72 bp TCCGGGCCACGCTGCCTGGCCTTAACCCATTCATCGTaGGATGCCAACAGCTCCGTTAACACTTTCTCGGGG +
Preference number: 6 (lower is better)
Translates to: SGPRCLALTHSS*DANSSVNTFSG
Trigger: CCCCGAGAAAGTGTTAACGGAGCTGTTGGCATCCAACGATGAATGGGTTAAGGCCAGGCAGCGTGGCCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 90 bp TGGAGTCTGGTCATCCTTAGCTTTTGCTTCTACCTGAGCCCCATCTaGGACCAGATACCGCACCACTTCTGCTTGTCCGGACCGAGCCGC +
Preference number: 6 (lower is better)
Translates to: WSLVILSFCFYLSPI*DQIPHHFCLSGPSR
Trigger: GCGGCTCGGTCCGGACAAGCAGAAGTGGTGCGGTATCTGGTCCAAGATGGGGCTCAGGTAGAAGCAAAAGCTAAGGATGACCAGACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 90 bp TGGCTGTCCTTCTCTGCGTGCTGGGCTGAGGTCTCAGCAGCAGACTaGGCAACATCTGGAGACATGGCCGACTTGTGTTCAAACAGCCCT +
Preference number: 6 (lower is better)
Translates to: WLSFSACWAEVSAAD*ATSGDMADLCSNSP
Trigger: AGGGCTGTTTGAACACAAGTCGGCCATGTCTCCAGATGTTGCCAAGTCTGCTGCTGAGACCTCAGCCCAGCACGCAGAGAAGGACAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS CAA 90 bp TCTCCCTTAGGCTCTGACCTGGTGGACCCCTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCAGCCGTAGTCCTGGTCATCTTTTTC +
Preference number: 6 (lower is better)
Translates to: SPLGSDLVDPSSSWR*SLALPSAVVLVIFF
Trigger: GAAAAAGATGACCAGGACTACGGCTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182029.8
ENSMUST00000183023.8
CDS CAA 90 bp CACCAGTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTaGGCGTCTCGTTCTGCCAACTCTGACACAGGTCCTTCAACTGGC +
Preference number: 6 (lower is better)
Translates to: HQLVFELALGTLGFH*ASRSANSDTGPSTG
Trigger: GCCAGTTGAAGGACCTGTGTCAGAGTTGGCAGAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAACTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182207.8
ENSMUST00000182692.8
CDS CAA 90 bp ACCTGCTTAGGCTCTGACCTGGTGGACCCCTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCAGCCGTAGTCCTGGTCATCTTTTTC +
Preference number: 6 (lower is better)
Translates to: TCLGSDLVDPSSSWR*SLALPSAVVLVIFF
Trigger: GAAAAAGATGACCAGGACTACGGCTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183169.8
CDS TCA 72 bp CCAGGCTTTGGCTGGCGCCATTGTCCAGAAGAAACCTaGCGACTTCCAGGTGGTTCTCCTGGGCTGCCATAT +
Preference number: 6 (lower is better)
Translates to: PGFGWRHCPEET*RLPGGSPGLPY
Trigger: ATATGGCAGCCCAGGAGAACCACCTGGAAGTCGTCAGGTTTCTTCTGGACAATGGCGCCAGCCAAAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS TCA 72 bp TTGACAAGGACCTCGGCCACATTCACTCGGTCTTCTTaGGCAGCCAGGTGGAGTGGGGTGAGACCGCTCTTA +
Preference number: 6 (lower is better)
Translates to: LTRTSATFTRSS*AARWSGVRPLL
Trigger: TAAGAGCGGTCTCACCCCACTCCACCTGGCTGCTCAAGAAGACCGAGTGAATGTGGCCGAGGTCCTTGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS TCA 72 bp AGGAGCTTCTGTTCAAGGTGTAGGACCTATCCGAACTaGAGGAGCGGAGGCTGGCAGAACGGGCTCCAAGAC +
Preference number: 6 (lower is better)
Translates to: RSFCSRCRTYPN*RSGGWQNGLQD
Trigger: GTCTTGGAGCCCGTTCTGCCAGCCTCCGCTCCTTCAGTTCGGATAGGTCCTACACCTTGAACAGAAGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000218680.2
CDS TCA 72 bp TGCGGTCGTCACAGGAGAAGTTCGAGAGGAGAAAGTTaGGTTGGGAGCCAGCCCCTTTATGGGTGTGGCCTC +
Preference number: 6 (lower is better)
Translates to: CGRHRRSSRGES*VGSQPLYGCGL
Trigger: GAGGCCACACCCATAAAGGGGCTGGCTCCCAACTCAACTTTCTCCTCTCGAACTTCTCCTGTGACGACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS TCA 72 bp CAGAGGTGGAAGGCCTCATGGAGGCCGGCGGCATTTTaGGTTTATGCTCCTGCAAGGCCATGGCTGGCTTTA +
Preference number: 6 (lower is better)
Translates to: QRWKASWRPAAF*VYAPARPWLAL
Trigger: TAAAGCCAGCCATGGCCTTGCAGGAGCATAAACTCAAAATGCCGCCGGCCTCCATGAGGCCTTCCACCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 72 bp CACTTCTGCTTGTCCGGACCGAGCCGCCATATGCAATaGCGTCTCTCCTCTCACATTGGTGGTGTTTGGGGA +
Preference number: 6 (lower is better)
Translates to: HFCLSGPSRHMQ*RLSSHIGGVWG
Trigger: TCCCCAAACACCACCAATGTGAGAGGAGAGACGGCATTGCATATGGCGGCTCGGTCCGGACAAGCAGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp CGCACCACTTCTGCTTGTCCGGACCGAGCCGCCATATaGAATGCCGTCTCTCCTCTCACATTGGTGGTGTTT +
Preference number: 6 (lower is better)
Translates to: RTTSACPDRAAI*NAVSPLTLVVF
Trigger: AAACACCACCAATGTGAGAGGAGAGACGGCATTGCATATGGCGGCTCGGTCCGGACAAGCAGAAGTGGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp GGCATCGGGAGACGCACTCTTCTGCAGCAGGAGACTTaGGACTTCAAGCTTTCCGTATTTGGCTGCCACGTG +
Preference number: 6 (lower is better)
Translates to: GIGRRTLLQQET*DFKLSVFGCHV
Trigger: CACGTGGCAGCCAAATACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAGAAGAGTGCGTCTCCCGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 72 bp GCGGATCTGTCAAGCAACATCTCTACCACCTGCTCATaGCCACTTCTCGCCCCACAGTGCAACGGAGTCAGA +
Preference number: 6 (lower is better)
Translates to: ADLSSNISTTCS*PLLAPQCNGVR
Trigger: TCTGACTCCGTTGCACTGTGGGGCGAGAAGTGGCCATGAGCAGGTGGTAGAGATGTTGCTTGACAGATCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 72 bp ACGTCGTCCACGGGCACGTTGTGCTGGAGGAGGAGTTaGACGCAGTTTAAATGGTCTCCTTGTGTGGCCATG +
Preference number: 6 (lower is better)
Translates to: TSSTGTLCWRRS*TQFKWSPCVAM
Trigger: CATGGCCACACAAGGAGACCATTTAAACTGCGTCCAACTCCTCCTCCAGCACAACGTGCCCGTGGACGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 72 bp GGTTGCCGGCGAGCGGTCGTCCACCGCCAGACCAAATaGCTTAGTGTCATCTTCCCGAGATTTACCGTCAAA +
Preference number: 6 (lower is better)
Translates to: GCRRAVVHRQTK*LSVIFPRFTVK
Trigger: TTTGACGGTAAATCTCGGGAAGATGACACTAAGCCATTTGGTCTGGCGGTGGACGACCGCTCGCCGGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182665.8
ENSMUST00000185582.2
ENSMUST00000186247.7
CDS CCA 72 bp CCTGCTCTGAGCAACGACAGTTCTTTTGGCTTCCTCTaGAGGCTGGTCATCCTCGCTCTGTTGGGTAGGGAC +
Preference number: 6 (lower is better)
Translates to: PALSNDSSFGFL*RLVILALLGRD
Trigger: GTCCCTACCCAACAGAGCGAGGATGACCAGCCTCCAGAGGAAGCCAAAAGAACTGTCGTTGCTCAGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp CTTCCTGACACTCTCCGTTGCTCGGGATGCTGGGGTTaGGGTCGACTGAAGGTGCCACTACATCTCTCTCTA +
Preference number: 6 (lower is better)
Translates to: LPDTLRCSGCWG*GRLKVPLHLSL
Trigger: TAGAGAGAGATGTAGTGGCACCTTCAGTCGACCCCAACCCCAGCATCCCGAGCAACGGAGAGTGTCAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp GACACGGGTGGATCTTACCTTTACTGGCAACTTGGATaGAGGCTGTTTGGCCTTGCCTCTCTCTGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: DTGGSYLYWQLG*RLFGLASLWLP
Trigger: GGGCAGCCAGAGAGAGGCAAGGCCAAACAGCCTCCATCCAAGTTGCCAGTAAAGGTAAGATCCACCCGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 72 bp CGGCATCGGGAGACGCACTCTTCTGCAGCAGGAGACTaGCGACTTCAAGCTTTCCGTATTTGGCTGCCACGT +
Preference number: 6 (lower is better)
Translates to: RHRETHSSAAGD*RLQAFRIWLPR
Trigger: ACGTGGCAGCCAAATACGGAAAGCTTGAAGTCGCAAGTCTCCTGCTGCAGAAGAGTGCGTCTCCCGATGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 72 bp AAGTGTCCTCTGCGGTTACCACTGGAGGTCCACCTGTaGGATGCTCTATGTTTCCCTGGGAAGGCACCAGCC +
Preference number: 6 (lower is better)
Translates to: KCPLRLPLEVHL*DALCFPGKAPA
Trigger: GGCTGGTGCCTTCCCAGGGAAACATAGAGCATCCAACAGGTGGACCTCCAGTGGTAACCGCAGAGGACACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 72 bp GTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTaGGCGTCTCGTTCTGCCAACCTGCAAGTGAAGACA +
Preference number: 6 (lower is better)
Translates to: VFELALGTLGFH*ASRSANLQVKT
Trigger: TGTCTTCACTTGCAGGTTGGCAGAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 72 bp TCGCCCTCTCTCCCGTTACCATCTGCCTCTTTCTGGTaGGAAGCTTTTGTGGCGGCGGTTTTGGACTTCGCC +
Preference number: 6 (lower is better)
Translates to: SPSLPLPSASFW*EAFVAAVLDFA
Trigger: GGCGAAGTCCAAAACCGCCGCCACAAAAGCTTCCAACCAGAAAGAGGCAGATGGTAACGGGAGAGAGGGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp CTGCGGTCGTCACAGGAGAAGTTCGAGAGGAGAAAGTaGAGTTGGGAGCCAGCCCCTTTATGGGTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: LRSSQEKFERRK*SWEPAPLWVWP
Trigger: AGGCCACACCCATAAAGGGGCTGGCTCCCAACTCAACTTTCTCCTCTCGAACTTCTCCTGTGACGACCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp TCAGAGGTGGAAGGCCTCATGGAGGCCGGCGGCATTTaGAGTTTATGCTCCTGCAAGGCCATGGCTGGCTTT +
Preference number: 6 (lower is better)
Translates to: SEVEGLMEAGGI*SLCSCKAMAGF
Trigger: AAAGCCAGCCATGGCCTTGCAGGAGCATAAACTCAAAATGCCGCCGGCCTCCATGAGGCCTTCCACCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp TTGCTTCTGGCAACCTCCTCGAAGTTCTCCTGCTGCTCCAGGGTTTaGTCCACCCTGTCGTCTGTCATACAGAAGCACCTCAGCGAGGAC +
Preference number: 6 (lower is better)
Translates to: LLLATSSKFSCCSRV*STLSSVIQKHLSED
Trigger: GTCCTCGCTGAGGTGCTTCTGTATGACAGACGACAGGGTGGACAAAACCCTGGAGCAGCAGGAGAACTTCGAGGAGGTTGCCAGAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000186247.7
ENSMUST00000218680.2
CDS CAA 90 bp AAGTCCTTAGGCTCTGACCTGGTGGACCCCTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCAGCCGTAGTCCTGGTCATCTTTTTC +
Preference number: 6 (lower is better)
Translates to: KSLGSDLVDPSSSWR*SLALPSAVVLVIFF
Trigger: GAAAAAGATGACCAGGACTACGGCTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
CDS CAA 90 bp TTGACCTTAGGCTCTGACCTGGTGGACCCCTCTTCTTCCTGGAGGTaGAGCCTGGCTTTGCCGTCAGCCGTAGTCCTGGTCATCTTTTTC +
Preference number: 6 (lower is better)
Translates to: LTLGSDLVDPSSSWR*SLALPSAVVLVIFF
Trigger: GAAAAAGATGACCAGGACTACGGCTGACGGCAAAGCCAGGCTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182269.8
ENSMUST00000183261.8
CDS CAA 90 bp CAAGGGCCTTTTCCAGGTGCCCTGCCCGAGCTGCTCTTAAGTAACTaGCGTTGGCATCAGATTCTTCTGGGAAGCCCTCTGGCTCTTCCA +
Preference number: 6 (lower is better)
Translates to: QGPFPGALPELLLSN*RWHQILLGSPLALP
Trigger: TGGAAGAGCCAGAGGGCTTCCCAGAAGAATCTGATGCCAACGCAAGTTACTTAAGAGCAGCTCGGGCAGGGCACCTGGAAAAGGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS CAA 90 bp GTGATGGTGGGAACCCTCCCAAGGGTACCAGAGGCAACCTGGGGATaGTACGGAGACGGCGACACCACCGTTTTTATTGGCGAAGAAACT +
Preference number: 6 (lower is better)
Translates to: VMVGTLPRVPEATWG*YGDGDTTVFIGEET
Trigger: AGTTTCTTCGCCAATAAAAACGGTGGTGTCGCCGTCTCCGTACAATCCCCAGGTTGCCTCTGGTACCCTTGGGAGGGTTCCCACCATCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS TCA 72 bp CCATCTTTGTCTGAGCATCCACATGGGCCCCCTGGTTaGCAAGGACCTCGGCCACATTCACTCGGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: PSLSEHPHGPPG*QGPRPHSLGLL
Trigger: AAGAAGACCGAGTGAATGTGGCCGAGGTCCTTGTCAACCAGGGGGCCCATGTGGATGCTCAGACAAAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS TCA 72 bp CGGCCAACTGGTACTTGTCAGACTCGTCCTGAAGGCTaGCCTCCATCATGTCAACCTCCCTTTCGGGGAGAT +
Preference number: 6 (lower is better)
Translates to: RPTGTCQTRPEG*PPSCQPPFRGD
Trigger: ATCTCCCCGAAAGGGAGGTTGACATGATGGAGGTCAGCCTTCAGGACGAGTCTGACAAGTACCAGTTGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS TCA 72 bp ACTGGCTCGGCCAACTGGTACTTGTCAGACTCGTCCTaGAGGCTGACCTCCATCATGTCAACCTCCCTTTCG +
Preference number: 6 (lower is better)
Translates to: TGSANWYLSDSS*RLTSIMSTSLS
Trigger: CGAAAGGGAGGTTGACATGATGGAGGTCAGCCTTCAGGACGAGTCTGACAAGTACCAGTTGGCCGAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS TCA 72 bp AGGACCTATCCGAACTGGCAGAACGGGCTCCAAGACTaGAGCCTACGTAACCTTCTGCTGGCAGGGAGTCAT +
Preference number: 6 (lower is better)
Translates to: RTYPNWQNGLQD*SLRNLLLAGSH
Trigger: ATGACTCCCTGCCAGCAGAAGGTTACGTAGGCTTCAGTCTTGGAGCCCGTTCTGCCAGTTCGGATAGGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182795.8
CDS TCA 72 bp CTAGCAAAACCTGGGTGCGTGGGCAGTTTGGTTTCTTaGGTTTTCTTAACCGGGATTCGGGACGGCCCGTCC +
Preference number: 6 (lower is better)
Translates to: LAKPGCVGSLVS*VFLTGIRDGPS
Trigger: GGACGGGCCGTCCCGAATCCCGGTTAAGAAAACTCAAGAAACCAAACTGCCCACGCACCCAGGTTTTGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 72 bp TCCTGCTGTTCAGAGCTCATGCCTACTTTTCTAGTCTaGGGTCTCAGTGGCTCTGCCTGCCGACCGTCGTTT +
Preference number: 6 (lower is better)
Translates to: SCCSELMPTFLV*GLSGSACRPSF
Trigger: AAACGACGGTCGGCAGGCAGAGCCACTGAGACCGCAGACTAGAAAAGTAGGCATGAGCTCTGAACAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS GCA 72 bp GCTGGGGACTCTAGGCTTCCACTTGGCGTCTCGTTCTaGCAACCTGCAAGTGAAGACATTGCCAGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: AGDSRLPLGVSF*QPASEDIASSA
Trigger: AGCAGAACTGGCAATGTCTTCACTTGCAGGTTGGCAGAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS GCA 72 bp ATCTGGAGACATGGCCGACTTGTGTTCAAACAGCCCTaGCAGCTCTTTGGAAGGGTCTCGCCCGGACTGAAA +
Preference number: 6 (lower is better)
Translates to: IWRHGRLVFKQP*QLFGRVSPGLK
Trigger: TTTCAGTCCGGGCGAGACCCTTCCAAAGAGCTGGCAGGGCTGTTTGAACACAAGTCGGCCATGTCTCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS GCA 72 bp AGTAGCAGCTATCGAGGACCCGAGGGAGGTGTACAGTaGACTTGCAGAGGGAGTTCTAAGGGACTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: SSSYRGPEGGVQ*TCRGSSKGLES
Trigger: GCTTTCCAGTCCCTTAGAACTCCCTCTGCAAGTGCACTGTACACCTCCCTCGGGTCCTCGATAGCTGCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 72 bp CAAAGCCATCTGAGATCCCTTGAAGGTGGGACACTTTaGCACGCATGTACTCACCCGTGCGGTGAAGTCCAC +
Preference number: 6 (lower is better)
Translates to: QSHLRSLEGGTL*HACTHPCGEVH
Trigger: GTGGACTTCACCGCACGGGTGAGTACATGCGTGGCAAAGTGTCCCACCTTCAAGGGATCTCAGATGGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS CCA 72 bp TCTCTGCGTGCTGGGCTGAGGTCTCAGCAGCAGACTTaGCAACATCTGGAGACATGGCCGACTTGTGTTCAA +
Preference number: 6 (lower is better)
Translates to: SLRAGLRSQQQT*QHLETWPTCVQ
Trigger: TTGAACACAAGTCGGCCATGTCTCCAGATGTTGCCAAGTCTGCTGCTGAGACCTCAGCCCAGCACGCAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS CCA 72 bp GGACTCTGCGGACGTAAAGCTAGGGAGGCAAAGCTCTaGCGTCTGTCTGCCTTCTCAGCCTTTTTATGTGCC +
Preference number: 6 (lower is better)
Translates to: GLCGRKAREAKL*RLSAFSAFLCA
Trigger: GGCACATAAAAAGGCTGAGAAGGCAGACAGACGCCAGAGCTTTGCCTCCCTAGCTTTACGTCCGCAGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CCA 72 bp GGTGCCCTGCCCGAGCTGCTCTTAAGTAACTTGCGTTaGCATCAGATTCTTCTGGGAAGCCCTCTGGCTCTT +
Preference number: 6 (lower is better)
Translates to: GALPELLLSNLR*HQILLGSPLAL
Trigger: AAGAGCCAGAGGGCTTCCCAGAAGAATCTGATGCCAACGCAAGTTACTTAAGAGCAGCTCGGGCAGGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS CCA 72 bp GTGTACAGTGCACTTGCAGAGGGAGTTCTAAGGGACTaGAAAGCCGAGGGGGCTGCAGAAACATACGACCTG +
Preference number: 6 (lower is better)
Translates to: VYSALAEGVLRD*KAEGAAETYDL
Trigger: CAGGTCGTATGTTTCTGCAGCCCCCTCGGCTTTCCAGTCCCTTAGAACTCCCTCTGCAAGTGCACTGTACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 72 bp CCTCTGGAGAGTGTCCTTTGTCACTCTTCGGGGACTTaGGTGGCCCTTTGCTCTCGACACACACGTCCTTTT +
Preference number: 6 (lower is better)
Translates to: PLESVLCHSSGT*VALCSRHTRPF
Trigger: AAAAGGACGTGTGTGTCGAGAGCAAAGGGCCACCCAAGTCCCCGAAGAGTGACAAAGGACACTCTCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 72 bp GGTCGACTGAAGGTGCCACTACATCTCTCTCTAGATTaGTGTCTACCGAGGTGTCCCCTGACTGTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: GRLKVPLHLSLD*CLPRCPLTVAV
Trigger: CACAGCCACAGTCAGGGGACACCTCGGTAGACACCAATCTAGAGAGAGATGTAGTGGCACCTTCAGTCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp CAACTTGGATGGAGGCTGTTTGGCCTTGCCTCTCTCTaGCTGCCCTCGCTTTTGTGTGGCGCATGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: QLGWRLFGLASL*LPSLLCGACFS
Trigger: AGAAAAGCATGCGCCACACAAAAGCGAGGGCAGCCAGAGAGAGGCAAGGCCAAACAGCCTCCATCCAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp GGTGGTGACGGTGACACGGGTGGATCTTACCTTTACTaGCAACTTGGATGGAGGCTGTTTGGCCTTGCCTCT +
Preference number: 6 (lower is better)
Translates to: GGDGDTGGSYLY*QLGWRLFGLAS
Trigger: AGAGGCAAGGCCAAACAGCCTCCATCCAAGTTGCCAGTAAAGGTAAGATCCACCCGTGTCACCGTCACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 72 bp AGGTGGAGTGGGGTGAGACCGCTCTTATTGCTCAGGTaGACATTCGCGTTTCTACTCAGGAGCAGCGACACC +
Preference number: 6 (lower is better)
Translates to: RWSGVRPLLLLR*TFAFLLRSSDT
Trigger: GGTGTCGCTGCTCCTGAGTAGAAACGCGAATGTCAACCTGAGCAATAAGAGCGGTCTCACCCCACTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 72 bp TCCTCTGGAGAGTGTCCTTTGTCACTCTTCGGGGACTaGGGTGGCCCTTTGCTCTCGACACACACGTCCTTT +
Preference number: 6 (lower is better)
Translates to: SSGECPLSLFGD*GGPLLSTHTSF
Trigger: AAAGGACGTGTGTGTCGAGAGCAAAGGGCCACCCAAGTCCCCGAAGAGTGACAAAGGACACTCTCCAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp CAGGAGCTGTGCGGAACTAGGGCGGCTATCTTCTTCTaGGGACCCTGGAGTGTTTACTCTGGAGGATTCCAG +
Preference number: 6 (lower is better)
Translates to: QELCGTRAAIFF*GPWSVYSGGFQ
Trigger: CTGGAATCCTCCAGAGTAAACACTCCAGGGTCCCAAGAAGAAGATAGCCGCCCTAGTTCCGCACAGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 72 bp GGGTCGACTGAAGGTGCCACTACATCTCTCTCTAGATaGGTGTCTACCGAGGTGTCCCCTGACTGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: GSTEGATTSLSR*VSTEVSPDCGC
Trigger: ACAGCCACAGTCAGGGGACACCTCGGTAGACACCAATCTAGAGAGAGATGTAGTGGCACCTTCAGTCGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 90 bp CTTCTAAAGAAGTGTCCTCTGCGGTTACCACTGGAGGTCCACCTGTaGGATGCTCTATGTTTCCCTGGGAAGGCACCAGCCCGTCACTCA +
Preference number: 6 (lower is better)
Translates to: LLKKCPLRLPLEVHL*DALCFPGKAPARHS
Trigger: TGAGTGACGGGCTGGTGCCTTCCCAGGGAAACATAGAGCATCCAACAGGTGGACCTCCAGTGGTAACCGCAGAGGACACTTCTTTAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 90 bp CACCAGTTAGTCTTCGAGCTTGCGCTGGGGACTCTAGGCTTCCACTaGGCGTCTCGTTCTGCCAACCTGCAAGTGAAGACATTGCCAGTT +
Preference number: 6 (lower is better)
Translates to: HQLVFELALGTLGFH*ASRSANLQVKTLPV
Trigger: AACTGGCAATGTCTTCACTTGCAGGTTGGCAGAACGAGACGCCAAGTGGAAGCCTAGAGTCCCCAGCGCAAGCTCGAAGACTAACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 90 bp AGGGAGTCATCACCTAGCTCCTTAAGGTCCTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATGGCATCTTCACTGTGTGGCAAAGCC +
Preference number: 6 (lower is better)
Translates to: RESSPSSLRSCGPRY*SVSPVMASSLCGKA
Trigger: GGCTTTGCCACACAGTGAAGATGCCATCACAGGGGACACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAGCTAGGTGATGACTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183261.8
CDS CAA 90 bp CTCTTCCTTCTCTTCCTGATTGTGCCACTGTTCAGGCGCCTGGTCTaGGCATCGATCTTCGCACCCCGGTCCAGCAATAGCTTCACCATA +
Preference number: 6 (lower is better)
Translates to: LFLLFLIVPLFRRLV*ASIFAPRSSNSFTI
Trigger: TATGGTGAAGCTATTGCTGGACCGGGGTGCGAAGATCGATGCCAAGACCAGGCGCCTGAACAGTGGCACAATCAGGAAGAGAAGGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182993.8
CDS TCA 72 bp GCTTCCACTTGGCGTCTCGTTCTGCCAACCTGCAAGTaGAGACATTGCCAGTTCTGCTCGCTGAACACGGTT +
Preference number: 6 (lower is better)
Translates to: ASTWRLVLPTCK*RHCQFCSLNTV
Trigger: AACCGTGTTCAGCGAGCAGAACTGGCAATGTCTTCACTTGCAGGTTGGCAGAACGAGACGCCAAGTGGAAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS TCA 72 bp CTTCGTCTTCACCTTATAGCCTTCTCCCTTAGGCTCTaGCCTGGTGGACCCCTCTTCTTCCTGGAGGTTGAG +
Preference number: 6 (lower is better)
Translates to: LRLHLIAFSLRL*PGGPLFFLEVE
Trigger: CTCAACCTCCAGGAAGAAGAGGGGTCCACCAGGTCAGAGCCTAAGGGAGAAGGCTATAAGGTGAAGACGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182029.8
ENSMUST00000183023.8
CDS TCA 72 bp TCTAGGCTTCCACTTGGCGTCTCGTTCTGCCAACTCTaGCACAGGTCCTTCAACTGGCTCTCATCTACGTCC +
Preference number: 6 (lower is better)
Translates to: SRLPLGVSFCQL*HRSFNWLSSTS
Trigger: GGACGTAGATGAGAGCCAGTTGAAGGACCTGTGTCAGAGTTGGCAGAACGAGACGCCAAGTGGAAGCCTAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182207.8
ENSMUST00000182692.8
CDS TCA 72 bp TCCACCATAAAGCTAACCAGAAACCTTGAGTCATACTaGGGCAGCGGAGACGAGCAGCCAGAATGCACCGGG +
Preference number: 6 (lower is better)
Translates to: STIKLTRNLESY*GSGDEQPECTG
Trigger: CCCGGTGCATTCTGGCTGCTCGTCTCCGCTGCCTCAGTATGACTCAAGGTTTCTGGTTAGCTTTATGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182683.8
CDS TCA 72 bp ATCGGCTCCTTCCGAGACTCTCTGCTGGAGTGTCCTTaGGTCCCTGGACTCTTTCCTGAGCCTTTTACTGGA +
Preference number: 6 (lower is better)
Translates to: IGSFRDSLLECP*VPGLFPEPFTG
Trigger: TCCAGTAAAAGGCTCAGGAAAGAGTCCAGGGACTCAAGGACACTCCAGCAGAGAGTCTCGGAAGGAGCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 72 bp CCTTTCTTTGTGGCGGCATCAACATTGGCTTCCCTCTaGAGCAGCTCAGAGACCACTTCCACATGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: PFFVAASTLASL*SSSETTSTWPS
Trigger: AGAAGGCCATGTGGAAGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCACAAAGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS GCA 72 bp TGTCATGGTGATGGAGGACCTCTCCAACAGAGACCCTaGGGTCGTCACAGGAGAAGTTCGAGAGGAGAAAGT +
Preference number: 6 (lower is better)
Translates to: CHGDGGPLQQRP*GRHRRSSRGES
Trigger: ACTTTCTCCTCTCGAACTTCTCCTGTGACGACCGCAGGGTCTCTGTTGGAGAGGTCCTCCATCACCATGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 72 bp CCATTGACTAGCGCTACCTCTGCATGTCCGGACATCTaGTTTAAGGGGGAGGAGAGAGACGATGCCATCGTA +
Preference number: 6 (lower is better)
Translates to: PLTSATSACPDI*FKGEERDDAIV
Trigger: TACGATGGCATCGTCTCTCTCCTCCCCCTTAAAGCAGATGTCCGGACATGCAGAGGTAGCGCTAGTCAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 72 bp GAAGGCCTCATGGAGGCCGGCGGCATTTTGAGTTTATaGTCCTGCAAGGCCATGGCTGGCTTTAAAATCCTC +
Preference number: 6 (lower is better)
Translates to: EGLMEAGGILSL*SCKAMAGFKIL
Trigger: GAGGATTTTAAAGCCAGCCATGGCCTTGCAGGAGCATAAACTCAAAATGCCGCCGGCCTCCATGAGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 72 bp AGGCCGTGTTTCCTTTCTTTGTGGCGGCATCAACATTaGCTTCCCTCTGCAGCAGCTCAGAGACCACTTCCA +
Preference number: 6 (lower is better)
Translates to: RPCFLSLWRHQH*LPSAAAQRPLP
Trigger: TGGAAGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCACAAAGAAAGGAAACACGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS CCA 72 bp CCGCCATATGCAATGCCGTCTCTCCTCTCACATTGGTaGTGTTTGGGGAGGCTCCATGATGCATTAGCTGTG +
Preference number: 6 (lower is better)
Translates to: PPYAMPSLLSHW*CLGRLHDALAV
Trigger: CACAGCTAATGCATCATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGACGGCATTGCATATGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 72 bp GAGCCGCCATATGCAATGCCGTCTCTCCTCTCACATTaGTGGTGTTTGGGGAGGCTCCATGATGCATTAGCT +
Preference number: 6 (lower is better)
Translates to: EPPYAMPSLLSH*WCLGRLHDALA
Trigger: AGCTAATGCATCATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGACGGCATTGCATATGGCGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 72 bp ACACAGGTCCTTCAACTGGCTCTCATCTACGTCCAGTaGGTCGGCCGGGTCTGTTACAGTTACAGAATCGTC +
Preference number: 6 (lower is better)
Translates to: TQVLQLALIYVQ*VGRVCYSYRIV
Trigger: GACGATTCTGTAACTGTAACAGACCCGGCCGACCCACTGGACGTAGATGAGAGCCAGTTGAAGGACCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CCA 72 bp AGGTCTCAGCAGCAGACTTGGCAACATCTGGAGACATaGCCGACTTGTGTTCAAACAGCCCTGCCAGCTCTT +
Preference number: 6 (lower is better)
Translates to: RSQQQTWQHLET*PTCVQTALPAL
Trigger: AAGAGCTGGCAGGGCTGTTTGAACACAAGTCGGCCATGTCTCCAGATGTTGCCAAGTCTGCTGCTGAGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS CCA 72 bp CGTTACCATCTGCCTCTTTCTGGTTGGAAGCTTTTGTaGCGGCGGTTTTGGACTTCGCCGTGTCTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: RYHLPLSGWKLL*RRFWTSPCLSA
Trigger: GGCAGAAAGACACGGCGAAGTCCAAAACCGCCGCCACAAAAGCTTCCAACCAGAAAGAGGCAGATGGTAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 72 bp GATTCGCCCTCTCTCCCGTTACCATCTGCCTCTTTCTaGTTGGAAGCTTTTGTGGCGGCGGTTTTGGACTTC +
Preference number: 6 (lower is better)
Translates to: DSPSLPLPSASF*LEAFVAAVLDF
Trigger: GAAGTCCAAAACCGCCGCCACAAAAGCTTCCAACCAGAAAGAGGCAGATGGTAACGGGAGAGAGGGCGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 72 bp GGCCCGGGCACTGTGATTGGAGCCGTGGTCCAGGACTaGTATGGTCTTGTAGAAAAGAATGGCTTGTGTGAA +
Preference number: 6 (lower is better)
Translates to: GPGTVIGAVVQD*YGLVEKNGLCE
Trigger: TTCACACAAGCCATTCTTTTCTACAAGACCATACCAGTCCTGGACCACGGCTCCAATCACAGTGCCCGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 72 bp TGGAGAGTGTCCTTTGTCACTCTTCGGGGACTTGGGTaGCCCTTTGCTCTCGACACACACGTCCTTTTTGAG +
Preference number: 6 (lower is better)
Translates to: WRVSFVTLRGLG*PFALDTHVLFE
Trigger: CTCAAAAAGGACGTGTGTGTCGAGAGCAAAGGGCCACCCAAGTCCCCGAAGAGTGACAAAGGACACTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 72 bp AGGAGCTGTGCGGAACTAGGGCGGCTATCTTCTTCTTaGGACCCTGGAGTGTTTACTCTGGAGGATTCCAGA +
Preference number: 6 (lower is better)
Translates to: RSCAELGRLSSS*DPGVFTLEDSR
Trigger: TCTGGAATCCTCCAGAGTAAACACTCCAGGGTCCCAAGAAGAAGATAGCCGCCCTAGTTCCGCACAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp CTTCTTGTCCCCTGCTCTGAGCAACGACAGTTCTTTTaGCTTCCTCTGGAGGCTGGTCATCCTCGCTCTGTT +
Preference number: 6 (lower is better)
Translates to: LLVPCSEQRQFF*LPLEAGHPRSV
Trigger: AACAGAGCGAGGATGACCAGCCTCCAGAGGAAGCCAAAAGAACTGTCGTTGCTCAGAGCAGGGGACAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 72 bp AAGGCCGTGTTTCCTTTCTTTGTGGCGGCATCAACATaGGCTTCCCTCTGCAGCAGCTCAGAGACCACTTCC +
Preference number: 6 (lower is better)
Translates to: KAVFPFFVAAST*ASLCSSSETTS
Trigger: GGAAGTGGTCTCTGAGCTGCTGCAGAGGGAAGCCAATGTTGATGCCGCCACAAAGAAAGGAAACACGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS CAA 72 bp TGGCTCCTTCAGGAAAGACAGGCGGCCACAGGGCTCTaGACTGGTGTCTCTGATCTTGATGGAAAATGGCAG +
Preference number: 6 (lower is better)
Translates to: WLLQERQAATGL*TGVSDLDGKWQ
Trigger: CTGCCATTTTCCATCAAGATCAGAGACACCAGTCAAGAGCCCTGTGGCCGCCTGTCTTTCCTGAAGGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183082.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000186247.7
ENSMUST00000218680.2
CDS CAA 72 bp TGTGCAGTACAACCCCATGGGGGTCTCCAGCTCCACTaGAAAGGAAGGGTGACCATCAACTGGGTCATGGAA +
Preference number: 6 (lower is better)
Translates to: CAVQPHGGLQLH*KGRVTINWVME
Trigger: TTCCATGACCCAGTTGATGGTCACCCTTCCTTTCAAGTGGAGCTGGAGACCCCCATGGGGTTGTACTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 72 bp GCCTCTTTCTGGTTGGAAGCTTTTGTGGCGGCGGTTTaGGACTTCGCCGTGTCTTTCTGCCCTTCGTCAACT +
Preference number: 6 (lower is better)
Translates to: ASFWLEAFVAAV*DFAVSFCPSST
Trigger: AGTTGACGAAGGGCAGAAAGACACGGCGAAGTCCAAAACCGCCGCCACAAAAGCTTCCAACCAGAAAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp TTTCCAGGTGCCCTGCCCGAGCTGCTCTTAAGTAACTaGCGTTGGCATCAGACTTTTTCTTGCGATCCCGGG +
Preference number: 6 (lower is better)
Translates to: FPGALPELLLSN*RWHQTFSCDPG
Trigger: CCCGGGATCGCAAGAAAAAGTCTGATGCCAACGCAAGTTACTTAAGAGCAGCTCGGGCAGGGCACCTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182992.8
CDS CAA 72 bp TTCATCGTCTATTCTCCCTTCTCTGGGGAGGTCGGTTaGGAATGGCTTCTCCTCAGGCACGTCTGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: FIVYSPFSGEVG*EWLLLRHVCLQ
Trigger: CTGCAGACAGACGTGCCTGAGGAGAAGCCATTCCAAACCGACCTCCCCAGAGAAGGGAGAATAGACGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp TCTAGCAAAACCTGGGTGCGTGGGCAGTTTGGTTTCTaGAGTTTTCTTAACCGGGATTCGGGACGGCCCGTC +
Preference number: 6 (lower is better)
Translates to: SSKTWVRGQFGF*SFLNRDSGRPV
Trigger: GACGGGCCGTCCCGAATCCCGGTTAAGAAAACTCAAGAAACCAAACTGCCCACGCACCCAGGTTTTGCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 90 bp AGGGAGTCATCACCTAGCTCCTTAAGGTCCTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATGGCATCTTCACCTTCATCGTCTGAC +
Preference number: 6 (lower is better)
Translates to: RESSPSSLRSCGPRY*SVSPVMASSPSSSD
Trigger: GTCAGACGATGAAGGTGAAGATGCCATCACAGGGGACACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAGCTAGGTGATGACTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000054167.15
ENSMUST00000182155.8
ENSMUST00000182683.8
ENSMUST00000182972.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS CAA 90 bp GTCCAGTCATCCTCTGGAGAGTGTCCTTTGTCACTCTTCGGGGACTaGGGTGGCCCTTTGCTCTCGACACACACGTCCTTTTTGAGTATC +
Preference number: 6 (lower is better)
Translates to: VQSSSGECPLSLFGD*GGPLLSTHTSFLSI
Trigger: GATACTCAAAAAGGACGTGTGTGTCGAGAGCAAAGGGCCACCCAAGTCCCCGAAGAGTGACAAAGGACACTCTCCAGAGGATGACTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp AGTTCCTTCTCAGAGGTGGAAGGCCTCATGGAGGCCGGCGGCATTTaGAGTTTATGCTCCTGCAAGGCCATGGCTGGCTTTAAAATCCTC +
Preference number: 6 (lower is better)
Translates to: SSFSEVEGLMEAGGI*SLCSCKAMAGFKIL
Trigger: GAGGATTTTAAAGCCAGCCATGGCCTTGCAGGAGCATAAACTCAAAATGCCGCCGGCCTCCATGAGGCCTTCCACCTCTGAGAAGGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp GTCATCGGACAGGAGCTGTGCGGAACTAGGGCGGCTATCTTCTTCTaGGGACCCTGGAGTGTTTACTCTGGAGGATTCCAGATAAGAAGG +
Preference number: 6 (lower is better)
Translates to: VIGQELCGTRAAIFF*GPWSVYSGGFQIRR
Trigger: CCTTCTTATCTGGAATCCTCCAGAGTAAACACTCCAGGGTCCCAAGAAGAAGATAGCCGCCCTAGTTCCGCACAGCTCCTGTCCGATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 90 bp TTTGGCGGGAAGACATCTTTTGGTGCGGTGGCCTTTATAGGAAGCTaGGATTTCCGCCTAAGCCCTATCGGCTCCTTCCGAGACTCTCTG +
Preference number: 6 (lower is better)
Translates to: FGGKTSFGAVAFIGS*DFRLSPIGSFRDSL
Trigger: CAGAGAGTCTCGGAAGGAGCCGATAGGGCTTAGGCGGAAATCCAAGCTTCCTATAAAGGCCACCGCACCAAAAGATGTCTTCCCGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS TCA 72 bp CAACCTGCAAGTGAAGACATTGCCAGTTCTGCTCGCTaGACACGGTTAAGCATAGCCTGCCCCTGGTCTTCT +
Preference number: 6 (lower is better)
Translates to: QPASEDIASSAR*TRLSIACPWSS
Trigger: AGAAGACCAGGGGCAGGCTATGCTTAACCGTGTTCAGCGAGCAGAACTGGCAATGTCTTCACTTGCAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS TCA 72 bp AACTTATCTTGGGACTGGCAGAACGGGCTCCAAGACTaGAGCCTACGTAACCTTCTGCTGGCAGGGAGTCAT +
Preference number: 6 (lower is better)
Translates to: NLSWDWQNGLQD*SLRNLLLAGSH
Trigger: ATGACTCCCTGCCAGCAGAAGGTTACGTAGGCTTCAGTCTTGGAGCCCGTTCTGCCAGTCCCAAGATAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CCA 72 bp ACGTTGTGCTGGAGGAGGAGTTGGACGCAGTTTAAATaGTCTCCTTGTGTGGCCATGTGCAGTGGCGACAAT +
Preference number: 6 (lower is better)
Translates to: TLCWRRSWTQFK*SPCVAMCSGDN
Trigger: ATTGTCGCCACTGCACATGGCCACACAAGGAGACCATTTAAACTGCGTCCAACTCCTCCTCCAGCACAACGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 72 bp CACATTCACTCGGTCTTCTTGAGCAGCCAGGTGGAGTaGGGTGAGACCGCTCTTATTGCTCAGGTTGACATT +
Preference number: 6 (lower is better)
Translates to: HIHSVFLSSQVE*GETALIAQVDI
Trigger: AATGTCAACCTGAGCAATAAGAGCGGTCTCACCCCACTCCACCTGGCTGCTCAAGAAGACCGAGTGAATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 72 bp TATCCGTCCGCTCACAAGGACTCTGCGGACTCATGCTaGGTTCAGTCAAGTAGCTGTAGCGCTTACGTAAAG +
Preference number: 6 (lower is better)
Translates to: YPSAHKDSADSC*VQSSSCSAYVK
Trigger: CTTTACGTAAGCGCTACAGCTACTTGACTGAACCCAGCATGAGTCCGCAGAGTCCTTGTGAGCGGACGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182207.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000218680.2
CDS CCA 72 bp TGTCCCACGGTCCCTTGGTCTCTAGATCTGATGTTATaGGGCAGGCTGAGTCTTCAACCTGTTGCTCAGGAA +
Preference number: 6 (lower is better)
Translates to: CPTVPWSLDLML*GRLSLQPVAQE
Trigger: TTCCTGAGCAACAGGTTGAAGACTCAGCCTGCCCCATAACATCAGATCTAGAGACCAAGGGACCGTGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 72 bp CCTCTTTCTGGTTGGAAGCTTTTGTGGCGGCGGTTTTaGACTTCGCCGTGTCTTTCTGCCCTTCGTCAACTT +
Preference number: 6 (lower is better)
Translates to: PLSGWKLLWRRF*TSPCLSALRQL
Trigger: AAGTTGACGAAGGGCAGAAAGACACGGCGAAGTCCAAAACCGCCGCCACAAAAGCTTCCAACCAGAAAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 72 bp CCTGTAGGTCATAGCCATCCAGAGAGTCTATCTCCGTaGCATCTGTGTCATGAGAAAACTCAGCCGTGGTCG +
Preference number: 6 (lower is better)
Translates to: PVGHSHPESLSP*HLCHEKTQPWS
Trigger: CGACCACGGCTGAGTTTTCTCATGACACAGATGCCACGGAGATAGACTCTCTGGATGGCTATGACCTACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp TCTTCGCACCCCGGTCCAGCAATAGCTTCACCATATTaGCATTTCCTCGCTTCGAGGCAACGTGTAAGGGAG +
Preference number: 6 (lower is better)
Translates to: SSHPGPAIASPY*HFLASRQRVRE
Trigger: CTCCCTTACACGTTGCCTCGAAGCGAGGAAATGCAAATATGGTGAAGCTATTGCTGGACCGGGGTGCGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 72 bp GTCATCCTTAGCTTTTGCTTCTACCTGAGCCCCATCTaGGACCAGATACCGCACCACTTCTGCTTGTCCGGA +
Preference number: 6 (lower is better)
Translates to: VILSFCFYLSPI*DQIPHHFCLSG
Trigger: TCCGGACAAGCAGAAGTGGTGCGGTATCTGGTCCAAGATGGGGCTCAGGTAGAAGCAAAAGCTAAGGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 72 bp TCACCTAGCTCCTTAAGGTCCTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATGGCATCTTCACCTTCA +
Preference number: 6 (lower is better)
Translates to: SPSSLRSCGPRY*SVSPVMASSPS
Trigger: TGAAGGTGAAGATGCCATCACAGGGGACACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAGCTAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000054167.15
ENSMUST00000182155.8
ENSMUST00000182683.8
ENSMUST00000182972.8
ENSMUST00000183148.8
ENSMUST00000183169.8
CDS CAA 72 bp TCACCTAGCTCCTTAAGGTCCTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATGGCATCTTCACTGTGT +
Preference number: 6 (lower is better)
Translates to: SPSSLRSCGPRY*SVSPVMASSLC
Trigger: ACACAGTGAAGATGCCATCACAGGGGACACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAGCTAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000092433.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000183074.8
ENSMUST00000183261.8
CDS CAA 72 bp TCCCGTTACCATCTGCCTCTTTCTGGTTGGAAGCTTTaGTGGCGGCGGTTTTGGACTTCGCCGTGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: SRYHLPLSGWKL*WRRFWTSPCLS
Trigger: AGAAAGACACGGCGAAGTCCAAAACCGCCGCCACAAAAGCTTCCAACCAGAAAGAGGCAGATGGTAACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 90 bp CTCTGCGGACCTTTTTCGATGTGCACTTCTATAATGCGCTCCAGTTaGGGTTTCATTTGGCTGTCCTTCTCTGCGTGCTGGGCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: LCGPFSMCTSIMRSS*GFIWLSFSACWAEV
Trigger: GACCTCAGCCCAGCACGCAGAGAAGGACAGCCAAATGAAACCCAAACTGGAGCGCATTATAGAAGTGCACATCGAAAAAGGTCCGCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
CDS CAA 90 bp GAAAGGTTCTTCATCGTCTATTCTCCCTTCTCTGGGGAGGTCGGTTaGGAATGGCTTCTCCTCAGGCACGTCTGTCTGCAGTATGGCAGT +
Preference number: 6 (lower is better)
Translates to: ERFFIVYSPFSGEVG*EWLLLRHVCLQYGS
Trigger: ACTGCCATACTGCAGACAGACGTGCCTGAGGAGAAGCCATTCCAAACCGACCTCCCCAGAGAAGGGAGAATAGACGATGAAGAACCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp TCCAGTGGGTCGGCCGGGTCTGTTACAGTTACAGAATCGTCCATTTaGCTGTCTTCTAAAGAAGTGTCCTCTGCGGTTACCACTGGAGGT +
Preference number: 6 (lower is better)
Translates to: SSGSAGSVTVTESSI*LSSKEVSSAVTTGG
Trigger: ACCTCCAGTGGTAACCGCAGAGGACACTTCTTTAGAAGACAGCAAAATGGACGATTCTGTAACTGTAACAGACCCGGCCGACCCACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 90 bp TTACCATCTGCCTCTTTCTGGTTGGAAGCTTTTGTGGCGGCGGTTTaGGACTTCGCCGTGTCTTTCTGCCCTTCGTCAACTTCCTTCAAC +
Preference number: 6 (lower is better)
Translates to: LPSASFWLEAFVAAV*DFAVSFCPSSTSFN
Trigger: GTTGAAGGAAGTTGACGAAGGGCAGAAAGACACGGCGAAGTCCAAAACCGCCGCCACAAAAGCTTCCAACCAGAAAGAGGCAGATGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 90 bp GGTCGCAATGGAACACTCTGTGACAGACTGGTCATTGTTTCCATTTaGAGCTGTTTCGTTCTGAGGGGAGTCAAGGCCAGATTCGCCCTC +
Preference number: 6 (lower is better)
Translates to: GRNGTLCDRLVIVSI*SCFVLRGVKARFAL
Trigger: GAGGGCGAATCTGGCCTTGACTCCCCTCAGAACGAAACAGCTCAAAATGGAAACAATGACCAGTCTGTCACAGAGTGTTCCATTGCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 90 bp TCTGGAGAGTGTCCTTTGTCACTCTTCGGGGACTTGGGTGGCCCTTaGCTCTCGACACACACGTCCTTTTTGAGTATCTCACTGACTTTG +
Preference number: 6 (lower is better)
Translates to: SGECPLSLFGDLGGP*LSTHTSFLSISLTL
Trigger: CAAAGTCAGTGAGATACTCAAAAAGGACGTGTGTGTCGAGAGCAAAGGGCCACCCAAGTCCCCGAAGAGTGACAAAGGACACTCTCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp CAAGGGCCTTTTCCAGGTGCCCTGCCCGAGCTGCTCTTAAGTAACTaGCGTTGGCATCAGACTTTTGAGAGCTTCGTGAATAACAGGATC +
Preference number: 6 (lower is better)
Translates to: QGPFPGALPELLLSN*RWHQTFESFVNNRI
Trigger: GATCCTGTTATTCACGAAGCTCTCAAAAGTCTGATGCCAACGCAAGTTACTTAAGAGCAGCTCGGGCAGGGCACCTGGAAAAGGCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000218680.2
CDS TCA 72 bp AGTGGAGTCTGGTCATCCTTAGCTTTTGCTTCTACCTaGGCCCCATCTTGGACCAGATACCGCACCACTTCT +
Preference number: 6 (lower is better)
Translates to: SGVWSSLAFAST*APSWTRYRTTS
Trigger: AGAAGTGGTGCGGTATCTGGTCCAAGATGGGGCTCAGGTAGAAGCAAAAGCTAAGGATGACCAGACTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS TCA 72 bp CCATTCACAGTGAGTTCATTGGGGGAGGCGTTGTTCTaGAGCAAGACATTGATGATATGCGTGTGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: PFTVSSLGEALF*SKTLMICVWPC
Trigger: GCAGGGCCACACGCATATCATCAATGTCTTGCTTCAGAACAACGCCTCCCCCAATGAACTCACTGTGAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS TCA 72 bp CCATCCAGAGAGTCTATCTCCGTGGCATCTGTGTCATaGGAAAACTCAGCCGTGGTCGCAATGGAACACTCT +
Preference number: 6 (lower is better)
Translates to: PSRESISVASVS*ENSAVVAMEHS
Trigger: AGAGTGTTCCATTGCGACCACGGCTGAGTTTTCTCATGACACAGATGCCACGGAGATAGACTCTCTGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS TCA 72 bp CCCTCCGTCCAAACATCCTTCTTGGTGTCTATGGTCTaGCTTGGGAGTTTAGAGTCGCTCTCTGTTAGACCG +
Preference number: 6 (lower is better)
Translates to: PSVQTSFLVSMV*LGSLESLSVRP
Trigger: CGGTCTAACAGAGAGCGACTCTAAACTCCCAAGTCAGACCATAGACACCAAGAAGGATGTTTGGACGGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS TCA 72 bp CTCTGGCGTCTGTCTGCCTTCTCAGCCTCATCATCTTaGTCTGACTCTGTCTCCTTTTTATGTGCCGGCAGA +
Preference number: 6 (lower is better)
Translates to: LWRLSAFSASSS*SDSVSFLCAGR
Trigger: TCTGCCGGCACATAAAAAGGAGACAGAGTCAGATCAAGATGATGAGGCTGAGAAGGCAGACAGACGCCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182207.8
ENSMUST00000183082.8
ENSMUST00000186247.7
CDS TCA 72 bp GAAGCCACTCTCAGTTGCTCTATTCACCACCATCTTTaGCTCCACGTCCGCGTTTGTGTCATTCTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: EATLSCSIHHHL*LHVRVCVILQE
Trigger: CTCCTGCAGAATGACACAAACGCGGACGTGGAGTCAAAGATGGTGGTGAATAGAGCAACTGAGAGTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182992.8
CDS TCA 72 bp TCTGCTGGAGTGTCCTTGAGTCCCTGGACTCTTTCCTaGGCCTTTTACTGGATTAGCTTCCTCTGTGGTGCA +
Preference number: 6 (lower is better)
Translates to: SAGVSLSPWTLS*AFYWISFLCGA
Trigger: TGCACCACAGAGGAAGCTAATCCAGTAAAAGGCTCAGGAAAGAGTCCAGGGACTCAAGGACACTCCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 72 bp TGGGGTAAGGCCCGACTCGGTTACGGCTTGAATAGATaGACCGTGCTTCAAAAGGAGTTCCATTACTCGGAT +
Preference number: 6 (lower is better)
Translates to: WGKARLGYGLNR*TVLQKEFHYSD
Trigger: ATCCGAGTAATGGAACTCCTTTTGAAGCACGGTGCATCTATTCAAGCCGTAACCGAGTCGGGCCTTACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp AAAGGGCTCTTCCCAGAGCTGTCTAGAAAGGACACTTaGTCTAGAGTATCATCTTCTGGACTGCCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: KGLFPELSRKDT*SRVSSSGLPWG
Trigger: TCCCCAGGGCAGTCCAGAAGATGATACTCTAGAGCAAGTGTCCTTTCTAGACAGCTCTGGGAAGAGCCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS GCA 72 bp ATCACACGCCTTCGTATGACCCGGGTAGTGATCCTCTaGTCCTCCTCTGAGCTTGAATCACTCTCACTGTTT +
Preference number: 6 (lower is better)
Translates to: ITRLRMTRVVIL*SSSELESLSLF
Trigger: AAACAGTGAGAGTGATTCAAGCTCAGAGGAGGAGCAGAGGATCACTACCCGGGTCATACGAAGGCGTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS GCA 72 bp TCGGTTTGGAATGGCTTCTCCTCAGGCACGTCTGTCTaGAGTATGGCAGTCATCCTCATGAGATCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: SVWNGFSSGTSV*SMAVILMRSSF
Trigger: GAAGGAAGATCTCATGAGGATGACTGCCATACTGCAGACAGACGTGCCTGAGGAGAAGCCATTCCAAACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 72 bp CTCATGGAGGCCGGCGGCATTTTGAGTTTATGCTCCTaGAAGGCCATGGCTGGCTTTAAAATCCTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: LMEAGGILSLCS*KAMAGFKILFC
Trigger: ACAGAAGAGGATTTTAAAGCCAGCCATGGCCTTGCAGGAGCATAAACTCAAAATGCCGCCGGCCTCCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 72 bp CTTCAGTGTTTTATAAGAGTCATCGGACAGGAGCTGTaGGGAACTAGGGCGGCTATCTTCTTCTTGGGACCC +
Preference number: 6 (lower is better)
Translates to: LQCFIRVIGQEL*GTRAAIFFLGP
Trigger: GGGTCCCAAGAAGAAGATAGCCGCCCTAGTTCCGCACAGCTCCTGTCCGATGACTCTTATAAAACACTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 72 bp GTCTGCCTTATGGTTTGGCGGGAAGACATCTTTTGGTaGGGTGGCCTTTATAGGAAGCTTGGATTTCCGCCT +
Preference number: 6 (lower is better)
Translates to: VCLMVWREDIFW*GGLYRKLGFPP
Trigger: AGGCGGAAATCCAAGCTTCCTATAAAGGCCACCGCACCAAAAGATGTCTTCCCGCCAAACCATAAGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp TGCGGAACTAGGGCGGCTATCTTCTTCTTGGGACCCTaGAGTGTTTACTCTGGAGGATTCCAGATAAGAAGG +
Preference number: 6 (lower is better)
Translates to: CGTRAAIFFLGP*SVYSGGFQIRR
Trigger: CCTTCTTATCTGGAATCCTCCAGAGTAAACACTCCAGGGTCCCAAGAAGAAGATAGCCGCCCTAGTTCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp GTGCAAGTGGATGCAGCGCGTCCTGTCAGAACTATGTaGCTTGTGCTGTTATCTGTCTGCATAGTGGAAGCA +
Preference number: 6 (lower is better)
Translates to: VQVDAARPVRTM*LVLLSVCIVEA
Trigger: TGCTTCCACTATGCAGACAGATAACAGCACAAGCCACATAGTTCTGACAGGACGCGCTGCATCCACTTGCAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp GGTGCCCTGCCCGAGCTGCTCTTAAGTAACTTGCGTTaGCATCAGACTTTTGAGAGCTTCGTGAATAACAGG +
Preference number: 6 (lower is better)
Translates to: GALPELLLSNLR*HQTFESFVNNR
Trigger: CCTGTTATTCACGAAGCTCTCAAAAGTCTGATGCCAACGCAAGTTACTTAAGAGCAGCTCGGGCAGGGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218680.2
CDS CAA 72 bp TATGCAATGCCGTCTCTCCTCTCACATTGGTGGTGTTaGGGGAGGCTCCATGATGCATTAGCTGTGACACGA +
Preference number: 6 (lower is better)
Translates to: YAMPSLLSHWWC*GRLHDALAVTR
Trigger: TCGTGTCACAGCTAATGCATCATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGACGGCATTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 72 bp TCACCTAGCTCCTTAAGGTCCTGTGGCCCGAGATACTaGTCAGTGTCCCCTGTGATGGCATCTTCACTTTTC +
Preference number: 6 (lower is better)
Translates to: SPSSLRSCGPRY*SVSPVMASSLF
Trigger: GAAAAGTGAAGATGCCATCACAGGGGACACTGACAAGTATCTCGGGCCACAGGACCTTAAGGAGCTAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000092431.12
ENSMUST00000092434.12
ENSMUST00000182884.8
CDS CAA 72 bp TCCCATGTTCTAAAGACCTTTCTGTCCCACGGTCCCTaGGTCTCTAGATCTGATGTTATGGGGCAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SHVLKTFLSHGP*VSRSDVMGQAE
Trigger: CTCAGCCTGCCCCATAACATCAGATCTAGAGACCAAGGGACCGTGGGACAGAAAGGTCTTTAGAACATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp TCCTTCCCTGGGCTAAACTCTAATGAGTCGGGAGATTaGGTGGGAGAGGTCTCGGTTTCATCAAGAGCTAGG +
Preference number: 6 (lower is better)
Translates to: SFPGLNSNESGD*VGEVSVSSRAR
Trigger: CCTAGCTCTTGATGAAACCGAGACCTCTCCCACCAAATCTCCCGACTCATTAGAGTTTAGCCCAGGGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp TGTCCTTTGTCACTCTTCGGGGACTTGGGTGGCCCTTaGCTCTCGACACACACGTCCTTTTTGAGTATCTCA +
Preference number: 6 (lower is better)
Translates to: CPLSLFGDLGGP*LSTHTSFLSIS
Trigger: TGAGATACTCAAAAAGGACGTGTGTGTCGAGAGCAAAGGGCCACCCAAGTCCCCGAAGAGTGACAAAGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp GAGCCGCCATATGCAATGCCGTCTCTCCTCTCACATTGGTGGTGTTaGGGGAGGCTCCATGATGCATTAGCTGTGACACGATATTTACAT +
Preference number: 6 (lower is better)
Translates to: EPPYAMPSLLSHWWC*GRLHDALAVTRYLH
Trigger: ATGTAAATATCGTGTCACAGCTAATGCATCATGGAGCCTCCCCAAACACCACCAATGTGAGAGGAGAGACGGCATTGCATATGGCGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 90 bp CCAGAACTTTCCCATGTTCTAAAGACCTTTCTGTCCCACGGTCCCTaGGTCTCTAGATCTGATGTTATGGGGCAGGCTGAGTCTTCAACC +
Preference number: 6 (lower is better)
Translates to: PELSHVLKTFLSHGP*VSRSDVMGQAESST
Trigger: GGTTGAAGACTCAGCCTGCCCCATAACATCAGATCTAGAGACCAAGGGACCGTGGGACAGAAAGGTCTTTAGAACATGGGAAAGTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 90 bp GCTCTTTGGATGGTACCAGAAGTTCCTCTATCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCAAGGTGTAGGACCTATCCGAACTGG +
Preference number: 6 (lower is better)
Translates to: ALWMVPEVPLSSCCP*RRSFCSRCRTYPNW
Trigger: CCAGTTCGGATAGGTCCTACACCTTGAACAGAAGCTCCTACGCAAGGGACAGCATGATGATAGAGGAACTTCTGGTACCATCCAAAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182795.8
CDS CAA 90 bp TCCGTAGTCAATGTTTTAATGGGCGACAGCAAAGCCGCTGCCGACTaGGTGAACGAGTTAGAGTCTGGGAGTTTCTTCAGTGCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: SVVNVLMGDSKAAAD*VNELESGSFFSAGS
Trigger: AGAACCAGCACTGAAGAAACTCCCAGACTCTAACTCGTTCACCAAGTCGGCAGCGGCTTTGCTGTCGCCCATTAAAACATTGACTACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp GCTTGGTTACCTTTTTCGATGTGCACTTCTATAATGCGCTCCAGTTaGGGTTTCATTTGGCTGTCCTTCTCTGCGTGCTGGGCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: AWLPFSMCTSIMRSS*GFIWLSFSACWAEV
Trigger: GACCTCAGCCCAGCACGCAGAGAAGGACAGCCAAATGAAACCCAAACTGGAGCGCATTATAGAAGTGCACATCGAAAAAGGTAACCAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS TCA 72 bp TCCTGGGCTGCCATATACAATGGTGTGAAGCCATTCTaGGATTGTGCGTTGACATTCGCTCCGTTCGTAACC +
Preference number: 6 (lower is better)
Translates to: SWAAIYNGVKPF*DCALTFAPFVT
Trigger: GGTTACGAACGGAGCGAATGTCAACGCACAATCTCAGAATGGCTTCACACCATTGTATATGGCAGCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182557.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000182993.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183240.2
ENSMUST00000218680.2
CDS TCA 72 bp ACTCTTCCGGGCTGTCGAGTTCTTCATCCATGCCATTaGGAAGCTCCGCGAGGTCTTCGTTTTTACTGTCAA +
Preference number: 6 (lower is better)
Translates to: TLPGCRVLHPCH*EAPRGLRFYCQ
Trigger: TTGACAGTAAAAACGAAGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGAACTCGACAGCCCGGAAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 23 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS TCA 72 bp CTTTTCGGGGGCGCTGGCTTTCCTTACTTCATCGTCTaGCATATCGAGGACTTCATTCATCGTTTCTGGGAC +
Preference number: 6 (lower is better)
Translates to: LFGGAGFPYFIV*HIEDFIHRFWD
Trigger: GTCCCAGAAACGATGAATGAAGTCCTCGATATGTCAGACGATGAAGTAAGGAAAGCCAGCGCCCCCGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000218680.2
CDS TCA 72 bp CAGGCACGTCTGTCTGCAGTATGGCAGTCATCCTCATaGGATCTTCCTTCATCTCGGCCACATCCTTTAAGA +
Preference number: 6 (lower is better)
Translates to: QARLSAVWQSSS*DLPSSRPHPLR
Trigger: TCTTAAAGGATGTGGCCGAGATGAAGGAAGATCTCATGAGGATGACTGCCATACTGCAGACAGACGTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS TCA 72 bp AGGTCATACTACCTATCAAAGCCATCTGAGATCCCTTaGAGGTGGGACACTTTGCCACGCATGTACTCACCC +
Preference number: 6 (lower is better)
Translates to: RSYYLSKPSEIP*RWDTLPRMYSP
Trigger: GGGTGAGTACATGCGTGGCAAAGTGTCCCACCTTCAAGGGATCTCAGATGGCTTTGATAGGTAGTATGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182557.8
CDS TCA 72 bp CAGACAAATGCATCCACATGGCATGCTTGGGACCACTaGCATTGCCCGAGTAGTGCAACACTGTCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: QTNASTWHAWDH*HCPSSATLSVS
Trigger: AGAAACTGACAGTGTTGCACTACTCGGGCAATGTCAGTGGTCCCAAGCATGCCATGTGGATGCATTTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 72 bp AGGGAGTCAGAATCAAACTCCCTCGTGAACGTCAGGTaGTGCTCTTTGGATGGTACCAGAAGTTCCTCTATC +
Preference number: 6 (lower is better)
Translates to: RESESNSLVNVR*CSLDGTRSSSI
Trigger: GATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGACGTTCACGAGGGAGTTTGATTCTGACTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS GCA 72 bp CTCGCGTCCACCATAAAGCTAACCAGAAACCCAGAATaGACCGGGCTTGAGACCAGGTTCACATTATCTAAC +
Preference number: 6 (lower is better)
Translates to: LASTIKLTRNPE*TGLETRFTLSN
Trigger: GTTAGATAATGTGAACCTGGTCTCAAGCCCGGTGCATTCTGGGTTTCTGGTTAGCTTTATGGTGGACGCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS GCA 72 bp TTTGTGGCGGCGGTTTTGGACTTCGCCGTGTCTTTCTaGCCTTCGTCAACTTCCTTCAACTTGAAGGTGTAT +
Preference number: 6 (lower is better)
Translates to: FVAAVLDFAVSF*PSSTSFNLKVY
Trigger: ATACACCTTCAAGTTGAAGGAAGTTGACGAAGGGCAGAAAGACACGGCGAAGTCCAAAACCGCCGCCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS GCA 72 bp CGTAGTCAATGTTTTAATGGGCGACAGCAAAGCCGCTaGCGACTTGGTGAACGAGTTAGAGTCTGGGAGTTT +
Preference number: 6 (lower is better)
Translates to: RSQCFNGRQQSR*RLGERVRVWEF
Trigger: AAACTCCCAGACTCTAACTCGTTCACCAAGTCGGCAGCGGCTTTGCTGTCGCCCATTAAAACATTGACTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 72 bp TTTTACTGGATTAGCTTCCTCTGTGGTGCAAGTGGATaGAGCGCGTCCTGTCAGAACTATGTGGCTTGTGCT +
Preference number: 6 (lower is better)
Translates to: FYWISFLCGASG*SASCQNYVACA
Trigger: AGCACAAGCCACATAGTTCTGACAGGACGCGCTGCATCCACTTGCACCACAGAGGAAGCTAATCCAGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp GCAGTGGCGACAATCCATTCTTGGTTTTTGAAAGGATaGGGGCGGATCTGTCAAGCAACATCTCTACCACCT +
Preference number: 6 (lower is better)
Translates to: AVATIHSWFLKG*GRICQATSLPP
Trigger: AGGTGGTAGAGATGTTGCTTGACAGATCCGCCCCCATCCTTTCAAAAACCAAGAATGGATTGTCGCCACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 72 bp TGCACTATGTCAGCTTTCCCAAGTCGGGCTGAGATGTaGAGTGGAGTCTGGTCATCCTTAGCTTTTGCTTCT +
Preference number: 6 (lower is better)
Translates to: CTMSAFPSRAEM*SGVWSSLAFAS
Trigger: AGAAGCAAAAGCTAAGGATGACCAGACTCCACTCCACATCTCAGCCCGACTTGGGAAAGCTGACATAGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CCA 72 bp AAACTCCCTCGTGAACGTCAGGTGCTGCTCTTTGGATaGTACCAGAAGTTCCTCTATCATCATGCTGTCCCT +
Preference number: 6 (lower is better)
Translates to: KLPRERQVLLFG*YQKFLYHHAVP
Trigger: AGGGACAGCATGATGATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGACGTTCACGAGGGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CCA 72 bp CAAAGCCGCTGCCGACTTGGTGAACGAGTTAGAGTCTaGGAGTTTCTTCAGTGCTGGTTCTGGCAAAACATT +
Preference number: 6 (lower is better)
Translates to: QSRCRLGERVRV*EFLQCWFWQNI
Trigger: AATGTTTTGCCAGAACCAGCACTGAAGAAACTCCCAGACTCTAACTCGTTCACCAAGTCGGCAGCGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 72 bp GGCTATCTTCTTCTTGGGACCCTGGAGTGTTTACTCTaGAGGATTCCAGATAAGAAGGCAAGGACTCTTCGG +
Preference number: 6 (lower is better)
Translates to: GYLLLGTLECLL*RIPDKKARTLR
Trigger: CCGAAGAGTCCTTGCCTTCTTATCTGGAATCCTCCAGAGTAAACACTCCAGGGTCCCAAGAAGAAGATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp ACTGTCTGCCTTATGGTTTGGCGGGAAGACATCTTTTaGTGCGGTGGCCTTTATAGGAAGCTTGGATTTCCG +
Preference number: 6 (lower is better)
Translates to: TVCLMVWREDIF*CGGLYRKLGFP
Trigger: CGGAAATCCAAGCTTCCTATAAAGGCCACCGCACCAAAAGATGTCTTCCCGCCAAACCATAAGGCAGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 72 bp AACTCTTCCGGGCTGTCGAGTTCTTCATCCATGCCATaGAGAAGCTCCGCGAGGTCTTCGTTTTTACTGTCA +
Preference number: 6 (lower is better)
Translates to: NSSGLSSSSSMP*RSSARSSFLLS
Trigger: TGACAGTAAAAACGAAGACCTCGCGGAGCTTCTCAATGGCATGGATGAAGAACTCGACAGCCCGGAAGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 23 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CAA 72 bp CCTCGGTTATTGGGCCAAGGGTCAAAGTCGAGACCTTaGGTCGCCACTGTTTTAAAAGGAGTGGCGAATTCT +
Preference number: 6 (lower is better)
Translates to: PRLLGQGSKSRP*VATVLKGVANS
Trigger: AGAATTCGCCACTCCTTTTAAAACAGTGGCGACCAAAGGTCTCGACTTTGACCCTTGGCCCAATAACCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182665.8
ENSMUST00000185582.2
ENSMUST00000186247.7
CDS CAA 72 bp GATTTACCGTCAAAAACTTCATTGTCCCCTCGGTTATaGGGCCAAGGGTCAAAGTCGAGACCTTTGGTCGCC +
Preference number: 6 (lower is better)
Translates to: DLPSKTSLSPRL*GQGSKSRPLVA
Trigger: GGCGACCAAAGGTCTCGACTTTGACCCTTGGCCCAATAACCGAGGGGACAATGAAGTTTTTGACGGTAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182665.8
ENSMUST00000185582.2
ENSMUST00000186247.7
CDS CAA 72 bp GCCTCGGTTTACCTGTTTTACTGTCTGCCTTATGGTTaGGCGGGAAGACATCTTTTGGTGCGGTGGCCTTTA +
Preference number: 6 (lower is better)
Translates to: ASVYLFYCLPYG*AGRHLLVRWPL
Trigger: TAAAGGCCACCGCACCAAAAGATGTCTTCCCGCCAAACCATAAGGCAGACAGTAAAACAGGTAAACCGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 72 bp TTTCCAGGTGCCCTGCCCGAGCTGCTCTTAAGTAACTaGCGTTGGCATCAGACTTTTGAGAGCTTCGTGAAT +
Preference number: 6 (lower is better)
Translates to: FPGALPELLLSN*RWHQTFESFVN
Trigger: ATTCACGAAGCTCTCAAAAGTCTGATGCCAACGCAAGTTACTTAAGAGCAGCTCGGGCAGGGCACCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218680.2
CDS CAA 90 bp TATTTAAGTTGCAAACAGCTGTTTGGGGTAATCCCTTTGTTGTCTTaGGCTCCTTCAGGAAAGACAGGCGGCCACAGGGCTCTTGACTGG +
Preference number: 6 (lower is better)
Translates to: YLSCKQLFGVIPLLS*APSGKTGGHRALDW
Trigger: CCAGTCAAGAGCCCTGTGGCCGCCTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCCAAACAGCTGTTTGCAACTTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183082.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000186247.7
ENSMUST00000218680.2
CDS CAA 90 bp ACCAGCGTGATTCTCTCTTATATCGTGAACGAGCACATGGGAGAGTaGCTCTTTCTGGGCCTTAGTGTTATTGGCCCCAGAACTTTCCCA +
Preference number: 6 (lower is better)
Translates to: TSVILSYIVNEHMGE*LFLGLSVIGPRTFP
Trigger: TGGGAAAGTTCTGGGGCCAATAACACTAAGGCCCAGAAAGAGCAACTCTCCCATGTGCTCGTTCACGATATAAGAGAGAATCACGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 90 bp GATGCCATCGTAGCTTTAGCTGTTGAGATGACATCAGCTGCAGACTaGGTCGGAGACACCACTGACTTTAAAGGGGAAGAGATCAGTGGT +
Preference number: 6 (lower is better)
Translates to: DAIVALAVEMTSAAD*VGDTTDFKGEEISG
Trigger: ACCACTGATCTCTTCCCCTTTAAAGTCAGTGGTGTCTCCGACCAAGTCTGCAGCTGATGTCATCTCAACAGCTAAAGCTACGATGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp ATTAAAGCTGAAGACGAAGGGTACTTCAGAGGAGAAACAGACCCATaGACTAGCGCTACCTCTGCATGTCCGGACATCTGCTTTAAGGGG +
Preference number: 6 (lower is better)
Translates to: IKAEDEGYFRGETDP*TSATSACPDICFKG
Trigger: CCCCTTAAAGCAGATGTCCGGACATGCAGAGGTAGCGCTAGTCAATGGGTCTGTTTCTCCTCTGAAGTACCCTTCGTCTTCAGCTTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp GCTGCGCTCACCACCGAGCTCACAGCGTTTGTGGCTGTAGAAATTTaGTCCTGTAATGTGGCAGTGGCTTTGCATCCGTTAATTAAAGCT +
Preference number: 6 (lower is better)
Translates to: AALTTELTAFVAVEI*SCNVAVALHPLIKA
Trigger: AGCTTTAATTAACGGATGCAAAGCCACTGCCACATTACAGGACAAAATTTCTACAGCCACAAACGCTGTGAGCTCGGTGGTGAGCGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS TCA 72 bp GCGTCTGTCTGCCTTCTCAGCCTCATCATCTTGATCTaGCTCTGTCTCCTTTTTATGTGCCGGCAGAGTAAT +
Preference number: 6 (lower is better)
Translates to: ASVCLLSLIILI*LCLLFMCRQSN
Trigger: ATTACTCTGCCGGCACATAAAAAGGAGACAGAGTCAGATCAAGATGATGAGGCTGAGAAGGCAGACAGACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182207.8
ENSMUST00000183082.8
ENSMUST00000186247.7
CDS TCA 72 bp CCTGCATGGTCTGTCACCGACTCCTCGGTATCAGAGTaGGACACATCTAGCTTTTCTGAGAGAAGCATTTTC +
Preference number: 6 (lower is better)
Translates to: PAWSVTDSSVSE*DTSSFSERSIF
Trigger: GAAAATGCTTCTCTCAGAAAAGCTAGATGTGTCTCACTCTGATACCGAGGAGTCGGTGACAGACCATGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 72 bp TACCCAGAAGTTGTTGCTGCATTGGGGGATGCTCCTTaGTGTAACAGTTGTTGCACTATGTCAGCTTTCCCA +
Preference number: 6 (lower is better)
Translates to: YPEVVAALGDAP*CNSCCTMSAFP
Trigger: TGGGAAAGCTGACATAGTGCAACAACTGTTACAGCAAGGAGCATCCCCCAATGCAGCAACAACTTCTGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp CTTGCGACTTCAAGCTTTCCGTATTTGGCTGCCACGTaGAGAGGGGTGAATCCCTTCTTTGTTGTTATGGAT +
Preference number: 6 (lower is better)
Translates to: LATSSFPYLAAT*RGVNPFFVVMD
Trigger: ATCCATAACAACAAAGAAGGGATTCACCCCTCTGCACGTGGCAGCCAAATACGGAAAGCTTGAAGTCGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp TGGTACCAGAAGTTCCTCTATCATCATGCTGTCCCTTaGGTAGGAGCTTCTGTTCAAGGTGTAGGACCTATC +
Preference number: 6 (lower is better)
Translates to: WYQKFLYHHAVP*VGASVQGVGPI
Trigger: GATAGGTCCTACACCTTGAACAGAAGCTCCTACGCAAGGGACAGCATGATGATAGAGGAACTTCTGGTACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS GCA 72 bp GAGTCAGAATCAAACTCCCTCGTGAACGTCAGGTGCTaGTCTTTGGATGGTACCAGAAGTTCCTCTATCATC +
Preference number: 6 (lower is better)
Translates to: ESESNSLVNVRC*SLDGTRSSSII
Trigger: GATGATAGAGGAACTTCTGGTACCATCCAAAGAGCAGCACCTGACGTTCACGAGGGAGTTTGATTCTGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS GCA 72 bp CGGCCGGGTCTGTTACAGTTACAGAATCGTCCATTTTaGTGTCTTCTAAAGAAGTGTCCTCTGCGGTTACCA +
Preference number: 6 (lower is better)
Translates to: RPGLLQLQNRPF*CLLKKCPLRLP
Trigger: TGGTAACCGCAGAGGACACTTCTTTAGAAGACAGCAAAATGGACGATTCTGTAACTGTAACAGACCCGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS GCA 72 bp AAGCCACTGTCAGACAAGGGACTTTTATCTTGGTCATaGTGGGAAAAGTCATCGGGAGACTCTAGGATGGCA +
Preference number: 6 (lower is better)
Translates to: KPLSDKGLLSWS*WEKSSGDSRMA
Trigger: TGCCATCCTAGAGTCTCCCGATGACTTTTCCCAGCATGACCAAGATAAAAGTCCCTTGTCTGACAGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS GCA 72 bp GTCCGCTCACAAGGACTCTGCGGACCTTTTTCGATGTaGACTTCTATAATGCGCTCCAGTTTGGGTTTCATT +
Preference number: 6 (lower is better)
Translates to: VRSQGLCGPFSM*TSIMRSSLGFI
Trigger: AATGAAACCCAAACTGGAGCGCATTATAGAAGTGCACATCGAAAAAGGTCCGCAGAGTCCTTGTGAGCGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
CDS GCA 72 bp TTCTCTCTACCTCTGTCTAGTCTGTCCTCAGACAAATaGATCCACATGGCATGCTTGGGACCACTGACATTG +
Preference number: 6 (lower is better)
Translates to: FSLPLSSLSSDK*IHMACLGPLTL
Trigger: CAATGTCAGTGGTCCCAAGCATGCCATGTGGATGCATTTGTCTGAGGACAGACTAGACAGAGGTAGAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp CCACTGTCAGACAAGGGACTTTTATCTTGGTCATGCTaGGAAAAGTCATCGGGAGACTCTAGGATGGCATCT +
Preference number: 6 (lower is better)
Translates to: PLSDKGLLSWSC*EKSSGDSRMAS
Trigger: AGATGCCATCCTAGAGTCTCCCGATGACTTTTCCCAGCATGACCAAGATAAAAGTCCCTTGTCTGACAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS CCA 72 bp ATTTACCGTCAAAAACTTCATTGTCCCCTCGGTTATTaGGCCAAGGGTCAAAGTCGAGACCTTTGGTCGCCA +
Preference number: 6 (lower is better)
Translates to: IYRQKLHCPLGY*AKGQSRDLWSP
Trigger: TGGCGACCAAAGGTCTCGACTTTGACCCTTGGCCCAATAACCGAGGGGACAATGAAGTTTTTGACGGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182665.8
ENSMUST00000185582.2
ENSMUST00000186247.7
CDS CCA 72 bp CGCTCACAAGGACTCTGCGGACCAATCTGGAAAAATTaGAGCCTCTCTTCCACAAAATCTCTCTTGCTCATG +
Preference number: 6 (lower is better)
Translates to: RSQGLCGPIWKN*SLSSTKSLLLM
Trigger: CATGAGCAAGAGAGATTTTGTGGAAGAGAGGCTCCAATTTTTCCAGATTGGTCCGCAGAGTCCTTGTGAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000185582.2
CDS CCA 72 bp CCTCGGTTTACCTGTTTTACTGTCTGCCTTATGGTTTaGCGGGAAGACATCTTTTGGTGCGGTGGCCTTTAT +
Preference number: 6 (lower is better)
Translates to: PRFTCFTVCLMV*REDIFWCGGLY
Trigger: ATAAAGGCCACCGCACCAAAAGATGTCTTCCCGCCAAACCATAAGGCAGACAGTAAAACAGGTAAACCGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 72 bp TCGGCCGGGTCTGTTACAGTTACAGAATCGTCCATTTaGCTGTCTTCTAAAGAAGTGTCCTCTGCGGTTACC +
Preference number: 6 (lower is better)
Translates to: SAGSVTVTESSI*LSSKEVSSAVT
Trigger: GGTAACCGCAGAGGACACTTCTTTAGAAGACAGCAAAATGGACGATTCTGTAACTGTAACAGACCCGGCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 72 bp CCTTTTTCGATGTGCACTTCTATAATGCGCTCCAGTTaGGGTTTCATTTGGCTGTCCTTCTCTGCGTGCTGG +
Preference number: 6 (lower is better)
Translates to: PFSMCTSIMRSS*GFIWLSFSACW
Trigger: CCAGCACGCAGAGAAGGACAGCCAAATGAAACCCAAACTGGAGCGCATTATAGAAGTGCACATCGAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS CAA 72 bp CCATTGCCGGAGCCAGATTTGCTTGTAACGATCTCATaGCTTTGGGCATGGTCGGCTTTGAATACCGTAACA +
Preference number: 6 (lower is better)
Translates to: PLPEPDLLVTIS*LWAWSALNTVT
Trigger: TGTTACGGTATTCAAAGCCGACCATGCCCAAAGCAATGAGATCGTTACAAGCAAATCTGGCTCCGGCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp GCAACTCGGTTACATTTGGGTCTTTGGATAGAGTCTTaGCTCACGTCACGATCTGTTTCCTTCTCCACGGTC +
Preference number: 6 (lower is better)
Translates to: ATRLHLGLWIES*LTSRSVSFSTV
Trigger: GACCGTGGAGAAGGAAACAGATCGTGACGTGAGCAAAGACTCTATCCAAAGACCCAAATGTAACCGAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp GGAACACTCTGTGACAGACTGGTCATTGTTTCCATTTaGAGCTGTTTCGTTCTGAGGGGAGTCAAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: GTLCDRLVIVSI*SCFVLRGVKAR
Trigger: TCTGGCCTTGACTCCCCTCAGAACGAAACAGCTCAAAATGGAAACAATGACCAGTCTGTCACAGAGTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp GTGTCATCTTCCCGAGATTTACCGTCAAAAACTTCATaGTCCCCTCGGTTATTGGGCCAAGGGTCAAAGTCG +
Preference number: 6 (lower is better)
Translates to: VSSSRDLPSKTS*SPRLLGQGSKS
Trigger: CGACTTTGACCCTTGGCCCAATAACCGAGGGGACAATGAAGTTTTTGACGGTAAATCTCGGGAAGATGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182665.8
ENSMUST00000185582.2
ENSMUST00000186247.7
CDS CAA 72 bp ATAGCCTTCTCCCTGCACGTCATCCTGCTTCCTCTCTaGTGGACCAATCCGTCTTATTACTTTCCGAGTGAT +
Preference number: 6 (lower is better)
Translates to: IAFSLHVILLPL*WTNPSYYFPSD
Trigger: ATCACTCGGAAAGTAATAAGACGGATTGGTCCACAAGAGAGGAAGCAGGATGACGTGCAGGGAGAAGGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CAA 72 bp TTGACTGAAGATGTAGTTGAGGCGCCTAACGTGGATTaGATCGGAGAAGGCGTCGAGACAGACCATATGGAT +
Preference number: 6 (lower is better)
Translates to: LTEDVVEAPNVD*IGEGVETDHMD
Trigger: ATCCATATGGTCTGTCTCGACGCCTTCTCCGATCAAATCCACGTTAGGCGCCTCAACTACATCTTCAGTCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp GTAGCTTTAGCTGTTGAGATGACATCAGCTGCAGACTaGGTCGGAGACACCACTGACTTTAAAGGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: VALAVEMTSAAD*VGDTTDFKGEE
Trigger: CTCTTCCCCTTTAAAGTCAGTGGTGTCTCCGACCAAGTCTGCAGCTGATGTCATCTCAACAGCTAAAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp ACCACCGAGCTCACAGCGTTTGTGGCTGTAGAAATTTaGTCCTGTAATGTGGCAGTGGCTTTGCATCCGTTA +
Preference number: 6 (lower is better)
Translates to: TTELTAFVAVEI*SCNVAVALHPL
Trigger: TAACGGATGCAAAGCCACTGCCACATTACAGGACAAAATTTCTACAGCCACAAACGCTGTGAGCTCGGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp AATGTTTTAATGGGCGACAGCAAAGCCGCTGCCGACTaGGTGAACGAGTTAGAGTCTGGGAGTTTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: NVLMGDSKAAAD*VNELESGSFFS
Trigger: ACTGAAGAAACTCCCAGACTCTAACTCGTTCACCAAGTCGGCAGCGGCTTTGCTGTCGCCCATTAAAACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp CCGCTCACAAGGACTCTGCGGACCAATCTGGAAAAATaGGAGCCTCTCTTCCACAAAATCTCTCTTGCTCAT +
Preference number: 6 (lower is better)
Translates to: PLTRTLRTNLEK*EPLFHKISLAH
Trigger: ATGAGCAAGAGAGATTTTGTGGAAGAGAGGCTCCAATTTTTCCAGATTGGTCCGCAGAGTCCTTGTGAGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000185582.2
CDS CAA 72 bp AGAATGGCTTGTGTGAATAAGTGGTGGGGAGGGATCTaGCTGTTCCTGAACTCCGTTCAATCATGCTGGGTT +
Preference number: 6 (lower is better)
Translates to: RMACVNKWWGGI*LFLNSVQSCWV
Trigger: AACCCAGCATGATTGAACGGAGTTCAGGAACAGCAAGATCCCTCCCCACCACTTATTCACACAAGCCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 90 bp GCTCTTTGGATGGTACCAGAAGTTCCTCTATCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCAAGGTGTAGGACCTATCCGAACTTA +
Preference number: 6 (lower is better)
Translates to: ALWMVPEVPLSSCCP*RRSFCSRCRTYPNL
Trigger: TAAGTTCGGATAGGTCCTACACCTTGAACAGAAGCTCCTACGCAAGGGACAGCATGATGATAGAGGAACTTCTGGTACCATCCAAAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CAA 90 bp ACTGTCCGGAAAGATCTAATAGGAGACGCCACGTCGCTAATGGATTaGACTGAAGATGTAGTTGAGGCGCCTAACGTGGATTTGATCGGA +
Preference number: 6 (lower is better)
Translates to: TVRKDLIGDATSLMD*TEDVVEAPNVDLIG
Trigger: TCCGATCAAATCCACGTTAGGCGCCTCAACTACATCTTCAGTCAAATCCATTAGCGACGTGGCGTCTCCTATTAGATCTTTCCGGACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp GATATCCGTCCGCTCACAAGGACTCTGCGGACCAATCTGGAAAAATaGGAGCCTCTCTTCCACAAAATCTCTCTTGCTCATGTCAATTGC +
Preference number: 6 (lower is better)
Translates to: DIRPLTRTLRTNLEK*EPLFHKISLAHVNC
Trigger: GCAATTGACATGAGCAAGAGAGATTTTGTGGAAGAGAGGCTCCAATTTTTCCAGATTGGTCCGCAGAGTCCTTGTGAGCGGACGGATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000185582.2
CDS CAA 90 bp CTGCCCCTGGTCTTCTGTCATCTCCTCAGCCTCTACTTCTTCAAGTaGAATGTCCTCAAACAGAGATTTGACCTTGTCTTCTGTCACTTC +
Preference number: 6 (lower is better)
Translates to: LPLVFCHLLSLYFFK*NVLKQRFDLVFCHF
Trigger: GAAGTGACAGAAGACAAGGTCAAATCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGAGGCTGAGGAGATGACAGAAGACCAGGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 90 bp TGGCTTTTGCCATTGCCGGAGCCAGATTTGCTTGTAACGATCTCATaGCTTTGGGCATGGTCGGCTTTGAATACCGTAACATCATTTTGC +
Preference number: 6 (lower is better)
Translates to: WLLPLPEPDLLVTIS*LWAWSALNTVTSFC
Trigger: GCAAAATGATGTTACGGTATTCAAAGCCGACCATGCCCAAAGCAATGAGATCGTTACAAGCAAATCTGGCTCCGGCAATGGCAAAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 90 bp TCAGGCATTGCCTTACTTAACATCTCAGTTCTGTGGCTTTTGCCATaGCCGGAGCCAGATTTGCTTGTAACGATCTCATTGCTTTGGGCA +
Preference number: 6 (lower is better)
Translates to: SGIALLNISVLWLLP*PEPDLLVTISLLWA
Trigger: TGCCCAAAGCAATGAGATCGTTACAAGCAAATCTGGCTCCGGCAATGGCAAAAGCCACAGAACTGAGATGTTAAGTAAGGCAATGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 90 bp AGGAGGGGGAAACTCAATATAGGCAACTCGGTTACATTTGGGTCTTaGGATAGAGTCTTTGCTCACGTCACGATCTGTTTCCTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: RRGKLNIGNSVTFGS*DRVFAHVTICFLLH
Trigger: GTGGAGAAGGAAACAGATCGTGACGTGAGCAAAGACTCTATCCAAAGACCCAAATGTAACCGAGTTGCCTATATTGAGTTTCCCCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 90 bp AATGGCTTAGTGTCATCTTCCCGAGATTTACCGTCAAAAACTTCATaGTCCCCTCGGTTATTGGGCCAAGGGTCAAAGTCGAGACCTTTG +
Preference number: 6 (lower is better)
Translates to: NGLVSSSRDLPSKTS*SPRLLGQGSKSRPL
Trigger: CAAAGGTCTCGACTTTGACCCTTGGCCCAATAACCGAGGGGACAATGAAGTTTTTGACGGTAAATCTCGGGAAGATGACACTAAGCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182665.8
ENSMUST00000185582.2
ENSMUST00000186247.7
CDS CAA 90 bp TCATCAGTAAATTGCTCTTCTGTGACAGATTCACCAGGGATGTTTTaGGCTTCCTCCCCCTTTATAATCACACGCCTTCGTATGACCCGG +
Preference number: 6 (lower is better)
Translates to: SSVNCSSVTDSPGMF*ASSPFIITRLRMTR
Trigger: CCGGGTCATACGAAGGCGTGTGATTATAAAGGGGGAGGAAGCCAAAAACATCCCTGGTGAATCTGTCACAGAAGAGCAATTTACTGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CAA 90 bp CTTCACCTTATAGCCTTCTCCCTGCACGTCATCCTGCTTCCTCTCTaGTGGACCAATCCGTCTTATTACTTTCCGAGTGATTTTTCTCGT +
Preference number: 6 (lower is better)
Translates to: LHLIAFSLHVILLPL*WTNPSYYFPSDFSR
Trigger: ACGAGAAAAATCACTCGGAAAGTAATAAGACGGATTGGTCCACAAGAGAGGAAGCAGGATGACGTGCAGGGAGAAGGCTATAAGGTGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CAA 90 bp CTTGAGGTACTTTCTTCCTCATCAGACAACTCCGATTGCATCTTTTaGTCTTCTTCAGTGAGGCGGTCCACAAGTTTTAGGGTCTCGCCA +
Preference number: 6 (lower is better)
Translates to: LEVLSSSSDNSDCIF*SSSVRRSTSFRVSP
Trigger: TGGCGAGACCCTAAAACTTGTGGACCGCCTCACTGAAGAAGACAAAAAGATGCAATCGGAGTTGTCTGATGAGGAAGAAAGTACCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS TCA 72 bp GTCAACTTTGTAACTGAAGTAAGTATCAGGGAGCACTaGTCTGTCCGGGTGTCTGCCTTCCAGGGTGAAAAA +
Preference number: 6 (lower is better)
Translates to: VNFVTEVSIREH*SVRVSAFQGEK
Trigger: TTTTTCACCCTGGAAGGCAGACACCCGGACAGATCAGTGCTCCCTGATACTTACTTCAGTTACAAAGTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS GCA 72 bp TGGACGCAGTTTAAATGGTCTCCTTGTGTGGCCATGTaGAGTGGCGACAATCCATTCTTGGTTTTTGAAAGG +
Preference number: 6 (lower is better)
Translates to: WTQFKWSPCVAM*SGDNPFLVFER
Trigger: CCTTTCAAAAACCAAGAATGGATTGTCGCCACTGCACATGGCCACACAAGGAGACCATTTAAACTGCGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS GCA 72 bp TCTGATGTTATGGGGCAGGCTGAGTCTTCAACCTGTTaGTCAGGAAAGAAGTCAGGCATTGCCTTACTTAAC +
Preference number: 6 (lower is better)
Translates to: SDVMGQAESSTC*SGKKSGIALLN
Trigger: GTTAAGTAAGGCAATGCCTGACTTCTTTCCTGAGCAACAGGTTGAAGACTCAGCCTGCCCCATAACATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 72 bp GTTTCAAAGCCACTGTCAGACAAGGGACTTTTATCTTaGTCATGCTGGGAAAAGTCATCGGGAGACTCTAGG +
Preference number: 6 (lower is better)
Translates to: VSKPLSDKGLLS*SCWEKSSGDSR
Trigger: CCTAGAGTCTCCCGATGACTTTTCCCAGCATGACCAAGATAAAAGTCCCTTGTCTGACAGTGGCTTTGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000182992.8
ENSMUST00000183023.8
ENSMUST00000186247.7
CDS CCA 72 bp GGTGAACGAGTTAGAGTCTGGGAGTTTCTTCAGTGCTaGTTCTGGCAAAACATTGACTACCGAGTATACTGG +
Preference number: 6 (lower is better)
Translates to: GERVRVWEFLQC*FWQNIDYRVYW
Trigger: CCAGTATACTCGGTAGTCAATGTTTTGCCAGAACCAGCACTGAAGAAACTCCCAGACTCTAACTCGTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp GCAGCCTGGTGCAGTGCTGTGTATCCATTCTTCGTCTaGGCATTAACTTTTGCAGAATGCTGCAGCAGAAAA +
Preference number: 6 (lower is better)
Translates to: AAWCSAVYPFFV*ALTFAECCSRK
Trigger: TTTTCTGCTGCAGCATTCTGCAAAAGTTAATGCCAAGACGAAGAATGGATACACAGCACTGCACCAGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 72 bp ATGGTACCAGAAGTTCCTCTATCATCATGCTGTCCCTaGCGTAGGAGCTTCTGTTCAAGGTGTAGGACCTAT +
Preference number: 6 (lower is better)
Translates to: MVPEVPLSSCCP*RRSFCSRCRTY
Trigger: ATAGGTCCTACACCTTGAACAGAAGCTCCTACGCAAGGGACAGCATGATGATAGAGGAACTTCTGGTACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182683.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CAA 72 bp GGCATTGCCTTACTTAACATCTCAGTTCTGTGGCTTTaGCCATTGCCGGAGCCAGATTTGCTTGTAACGATC +
Preference number: 6 (lower is better)
Translates to: GIALLNISVLWL*PLPEPDLLVTI
Trigger: GATCGTTACAAGCAAATCTGGCTCCGGCAATGGCAAAAGCCACAGAACTGAGATGTTAAGTAAGGCAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp ATTCTCTCTTATATCGTGAACGAGCACATGGGAGAGTaGCTCTTTCTGGGCCTTAGTGTTATTGGCCCCAGA +
Preference number: 6 (lower is better)
Translates to: ILSYIVNEHMGE*LFLGLSVIGPR
Trigger: TCTGGGGCCAATAACACTAAGGCCCAGAAAGAGCAACTCTCCCATGTGCTCGTTCACGATATAAGAGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp AGAATGGCTTGTGTGAATAAGTGGTGGGGAGGGATCTaGCTGTTCCTGAACTCCGTTCAACTGTTTTCATGC +
Preference number: 6 (lower is better)
Translates to: RMACVNKWWGGI*LFLNSVQLFSC
Trigger: GCATGAAAACAGTTGAACGGAGTTCAGGAACAGCAAGATCCCTCCCCACCACTTATTCACACAAGCCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182992.8
CDS CAA 72 bp TTGGGTGGCCCTTTGCTCTCGACACACACGTCCTTTTaGAGTATCTCACTGACTTTGACTAAGTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: LGGPLLSTHTSF*SISLTLTKSSF
Trigger: GAAGGAAGACTTAGTCAAAGTCAGTGAGATACTCAAAAAGGACGTGTGTGTCGAGAGCAAAGGGCCACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp CCAGATTTGCTTGTAACGATCTCATTGCTTTGGGCATGGTCGGCTTaGAATACCGTAACATCATTTTGCACTGGCACTCTTTCCTCTAGG +
Preference number: 6 (lower is better)
Translates to: PDLLVTISLLWAWSA*NTVTSFCTGTLSSR
Trigger: CCTAGAGGAAAGAGTGCCAGTGCAAAATGATGTTACGGTATTCAAAGCCGACCATGCCCAAAGCAATGAGATCGTTACAAGCAAATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 90 bp CTAATGGATTTGACTGAAGATGTAGTTGAGGCGCCTAACGTGGATTaGATCGGAGAAGGCGTCGAGACAGACCATATGGATTTTAACGGA +
Preference number: 6 (lower is better)
Translates to: LMDLTEDVVEAPNVD*IGEGVETDHMDFNG
Trigger: TCCGTTAAAATCCATATGGTCTGTCTCGACGCCTTCTCCGATCAAATCCACGTTAGGCGCCTCAACTACATCTTCAGTCAAATCCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp GCGCATGCTTTTCTGACTGAAACTAGGTTCTCCCTGTGTGTGTTTTaGACGGGAATTCGGGACTTGGCATCTAAACATGAAGAAGTAGGA +
Preference number: 6 (lower is better)
Translates to: AHAFLTETRFSLCVF*TGIRDLASKHEEVG
Trigger: TCCTACTTCTTCATGTTTAGATGCCAAGTCCCGAATTCCCGTCAAAAACACACACAGGGAGAACCTAGTTTCAGTCAGAAAAGCATGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS TCA 72 bp AATCGGGCTGGGTTGTCCTGGTATAAAAGCTATGAGTaGGTCTGGTGTCTTAGATGTGAACTCGTAACTCAC +
Preference number: 6 (lower is better)
Translates to: NRAGLSWYKSYE*VWCLRCELVTH
Trigger: GTGAGTTACGAGTTCACATCTAAGACACCAGACTCACTCATAGCTTTTATACCAGGACAACCCAGCCCGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS TCA 72 bp GAGAAAACTCAGCCGTGGTCGCAATGGAACACTCTGTaGCAGACTGGTCATTGTTTCCATTTTGAGCTGTTT +
Preference number: 6 (lower is better)
Translates to: EKTQPWSQWNTL*QTGHCFHFELF
Trigger: AAACAGCTCAAAATGGAAACAATGACCAGTCTGTCACAGAGTGTTCCATTGCGACCACGGCTGAGTTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS TCA 72 bp GTAACTTGCGTTGGCATCAGACTTTTGAGAGCTTCGTaGATAACAGGATCCAAAGTCACCCTGCTCAAGATC +
Preference number: 6 (lower is better)
Translates to: VTCVGIRLLRAS*ITGSKVTLLKI
Trigger: GATCTTGAGCAGGGTGACTTTGGATCCTGTTATTCACGAAGCTCTCAAAAGTCTGATGCCAACGCAAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000218680.2
CDS GCA 72 bp CTTGGTGAACGAGTTAGAGTCTGGGAGTTTCTTCAGTaGTGGTTCTGGCAAAACATTGACTACCGAGTATAC +
Preference number: 6 (lower is better)
Translates to: LGERVRVWEFLQ*WFWQNIDYRVY
Trigger: GTATACTCGGTAGTCAATGTTTTGCCAGAACCAGCACTGAAGAAACTCCCAGACTCTAACTCGTTCACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CCA 72 bp TCTATGCTAGAGATATCACTAAAATGGTCATCTTGCTaGAAAGGGTTGGGTGGTGTGCAGTACAACCCCATG +
Preference number: 6 (lower is better)
Translates to: SMLEISLKWSSC*KGLGGVQYNPM
Trigger: CATGGGGTTGTACTGCACACCACCCAACCCTTTCCAGCAAGATGACCATTTTAGTGATATCTCTAGCATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182207.8
ENSMUST00000182692.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CCA 72 bp TCTCTTTCACGATTTCGTTTTCTAACCCCTGACAACTaGTCACCACAGCCTCTGTCTTATCTGTCACTTCTC +
Preference number: 6 (lower is better)
Translates to: SLSRFRFLTPDN*SPQPLSYLSLL
Trigger: GAGAAGTGACAGATAAGACAGAGGCTGTGGTGACCAGTTGTCAGGGGTTAGAAAACGAAATCGTGAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 72 bp TATTTAAGTTGCAAACAGCTGTTTGGGGTAATCCCTTaGTTGTCTTTGGCTCCTTCAGGAAAGACAGGCGGC +
Preference number: 6 (lower is better)
Translates to: YLSCKQLFGVIP*LSLAPSGKTGG
Trigger: GCCGCCTGTCTTTCCTGAAGGAGCCAAAGACAACAAAGGGATTACCCCAAACAGCTGTTTGCAACTTAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183082.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000186247.7
ENSMUST00000218680.2
CDS CAA 72 bp GCCTTACTTAACATCTCAGTTCTGTGGCTTTTGCCATaGCCGGAGCCAGATTTGCTTGTAACGATCTCATTG +
Preference number: 6 (lower is better)
Translates to: ALLNISVLWLLP*PEPDLLVTISL
Trigger: CAATGAGATCGTTACAAGCAAATCTGGCTCCGGCAATGGCAAAAGCCACAGAACTGAGATGTTAAGTAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp AATTGCTCTTCTGTGACAGATTCACCAGGGATGTTTTaGGCTTCCTCCCCCTTTATAATCACACGCCTTCGT +
Preference number: 6 (lower is better)
Translates to: NCSSVTDSPGMF*ASSPFIITRLR
Trigger: ACGAAGGCGTGTGATTATAAAGGGGGAGGAAGCCAAAAACATCCCTGGTGAATCTGTCACAGAAGAGCAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CAA 72 bp AAAGATCTAATAGGAGACGCCACGTCGCTAATGGATTaGACTGAAGATGTAGTTGAGGCGCCTAACGTGGAT +
Preference number: 6 (lower is better)
Translates to: KDLIGDATSLMD*TEDVVEAPNVD
Trigger: ATCCACGTTAGGCGCCTCAACTACATCTTCAGTCAAATCCATTAGCGACGTGGCGTCTCCTATTAGATCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp TTCTCCCTGTGTGTGTTTTTGACGGGAATTCGGGACTaGGCATCTAAACATGAAGAAGTAGGAAGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: FSLCVFLTGIRD*ASKHEEVGRAL
Trigger: CAAAGCCCTTCCTACTTCTTCATGTTTAGATGCCAAGTCCCGAATTCCCGTCAAAAACACACACAGGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 90 bp TCTGACATATCGAGGACTTCATTCATCGTTTCTGGGACATTCATTTaGTGCTTCTCCGTGATGGTAGTGGTGGTCATAATTTCCTCCGTC +
Preference number: 6 (lower is better)
Translates to: SDISRTSFIVSGTFI*CFSVMVVVVIISSV
Trigger: GACGGAGGAAATTATGACCACCACTACCATCACGGAGAAGCACAAAATGAATGTCCCAGAAACGATGAATGAAGTCCTCGATATGTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092434.12
ENSMUST00000182155.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000218680.2
CDS CAA 90 bp TCTGCCTTCTCAGCCTTTTTATGTGCCGGCAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGTAATCCCTTTGTTGTCTTTGGCTCC +
Preference number: 6 (lower is better)
Translates to: SAFSAFLCAGRVIFK*QTAVWGNPFVVFGS
Trigger: GGAGCCAAAGACAACAAAGGGATTACCCCAAACAGCTGTTTGCAACTTAAATATTACTCTGCCGGCACATAAAAAGGCTGAGAAGGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CAA 90 bp GCGTTTGTGGCTGTAGAAATTTTGTCCTGTAATGTGGCAGTGGCTTaGCATCCGTTAATTAAAGCTGAAGACGAAGGGTACTTCAGAGGA +
Preference number: 6 (lower is better)
Translates to: AFVAVEILSCNVAVA*HPLIKAEDEGYFRG
Trigger: TCCTCTGAAGTACCCTTCGTCTTCAGCTTTAATTAACGGATGCAAAGCCACTGCCACATTACAGGACAAAATTTCTACAGCCACAAACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 90 bp GAAACTAGGTTCTCCCTGTGTGTGTTTTTGACGGGAATTCGGGACTaGGCATCTAAACATGAAGAAGTAGGAAGGGCTTTGTGTTTCTCA +
Preference number: 6 (lower is better)
Translates to: ETRFSLCVFLTGIRD*ASKHEEVGRALCFS
Trigger: TGAGAAACACAAAGCCCTTCCTACTTCTTCATGTTTAGATGCCAAGTCCCGAATTCCCGTCAAAAACACACACAGGGAGAACCTAGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS GCA 72 bp ACTTCAGTGGGTTCGGCTTGGTTACCTTTTTCGATGTaGACTTCTATAATGCGCTCCAGTTTGGGTTTCATT +
Preference number: 6 (lower is better)
Translates to: TSVGSAWLPFSM*TSIMRSSLGFI
Trigger: AATGAAACCCAAACTGGAGCGCATTATAGAAGTGCACATCGAAAAAGGTAACCAAGCCGAACCCACTGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 72 bp CTTGTAACGATCTCATTGCTTTGGGCATGGTCGGCTTaGAATACCGTAACATCATTTTGCACTGGCACTCTT +
Preference number: 6 (lower is better)
Translates to: LVTISLLWAWSA*NTVTSFCTGTL
Trigger: AAGAGTGCCAGTGCAAAATGATGTTACGGTATTCAAAGCCGACCATGCCCAAAGCAATGAGATCGTTACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp CTTCCCTTCAGGAGTATGCTCACCAATCTGGAAAAATaGGAGCCTCTCTTCCACAAAATCTCTCTTGCTCAT +
Preference number: 6 (lower is better)
Translates to: LPFRSMLTNLEK*EPLFHKISLAH
Trigger: ATGAGCAAGAGAGATTTTGTGGAAGAGAGGCTCCAATTTTTCCAGATTGGTGAGCATACTCCTGAAGGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 90 bp TCTGACTCTGTCTCCTTTTTATGTGCCGGCAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGTAATCCCTTTGTTGTCTTTGGCTCC +
Preference number: 6 (lower is better)
Translates to: SDSVSFLCAGRVIFK*QTAVWGNPFVVFGS
Trigger: GGAGCCAAAGACAACAAAGGGATTACCCCAAACAGCTGTTTGCAACTTAAATATTACTCTGCCGGCACATAAAAAGGAGACAGAGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000183082.8
ENSMUST00000186247.7
CDS CAA 90 bp GGGATGCTTTTTGGTCTCTCTAATAATGACTTCAGTGGGTTCGGCTaGGTTACCTTTTTCGATGTGCACTTCTATAATGCGCTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: GMLFGLSNNDFSGFG*VTFFDVHFYNALQF
Trigger: AAACTGGAGCGCATTATAGAAGTGCACATCGAAAAAGGTAACCAAGCCGAACCCACTGAAGTCATTATTAGAGAGACCAAAAAGCATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS TCA 72 bp CATGAAGAAGTAGGAAGGGCTTTGTGTTTCTCATATTaGCCAACCTGCCTCGGTTTACCTGTTTTACTGTCT +
Preference number: 6 (lower is better)
Translates to: HEEVGRALCFSY*PTCLGLPVLLS
Trigger: AGACAGTAAAACAGGTAAACCGAGGCAGGTTGGTCAATATGAGAAACACAAAGCCCTTCCTACTTCTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CCA 72 bp CCAGATTTGCTTGTAACGATCTCATTGCTTTGGGCATaGTCGGCTTTGAATACCGTAACATCATTTTGCACT +
Preference number: 6 (lower is better)
Translates to: PDLLVTISLLWA*SALNTVTSFCT
Trigger: AGTGCAAAATGATGTTACGGTATTCAAAGCCGACCATGCCCAAAGCAATGAGATCGTTACAAGCAAATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CCA 72 bp TTGGTCTCTCTAATAATGACTTCAGTGGGTTCGGCTTaGTTACCTTTTTCGATGTGCACTTCTATAATGCGC +
Preference number: 6 (lower is better)
Translates to: LVSLIMTSVGSA*LPFSMCTSIMR
Trigger: GCGCATTATAGAAGTGCACATCGAAAAAGGTAACCAAGCCGAACCCACTGAAGTCATTATTAGAGAGACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 72 bp GTCTTCTGTCATCTCCTCAGCCTCTACTTCTTCAAGTaGAATGTCCTCAAACAGAGATTTGACCTTGTCTTC +
Preference number: 6 (lower is better)
Translates to: VFCHLLSLYFFK*NVLKQRFDLVF
Trigger: GAAGACAAGGTCAAATCTCTGTTTGAGGACATTCAACTTGAAGAAGTAGAGGCTGAGGAGATGACAGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000182029.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183261.8
CDS CAA 72 bp GCCTCTCTTCCACAAAATCTCTCTTGCTCATGTCAATaGCACCACTGCGAGTCATCTCAAACATTTTTCCTT +
Preference number: 6 (lower is better)
Translates to: ASLPQNLSCSCQ*HHCESSQTFFL
Trigger: AAGGAAAAATGTTTGAGATGACTCGCAGTGGTGCAATTGACATGAGCAAGAGAGATTTTGTGGAAGAGAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182665.8
ENSMUST00000185582.2
ENSMUST00000186247.7
CDS CAA 72 bp GCTGTAGAAATTTTGTCCTGTAATGTGGCAGTGGCTTaGCATCCGTTAATTAAAGCTGAAGACGAAGGGTAC +
Preference number: 6 (lower is better)
Translates to: AVEILSCNVAVA*HPLIKAEDEGY
Trigger: GTACCCTTCGTCTTCAGCTTTAATTAACGGATGCAAAGCCACTGCCACATTACAGGACAAAATTTCTACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp TCTGGGAGTTTCTTCAGTGCTGGTTCTGGCAAAACATaGACTACCGAGTATACTGGCACTGTGATTATTGAT +
Preference number: 6 (lower is better)
Translates to: SGSFFSAGSGKT*TTEYTGTVIID
Trigger: ATCAATAATCACAGTGCCAGTATACTCGGTAGTCAATGTTTTGCCAGAACCAGCACTGAAGAAACTCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS CAA 72 bp TTTCTGACTGAAACTAGGTTCTCCCTGTGTGTGTTTTaGACGGGAATTCGGGACTTGGCATCTAAACATGAA +
Preference number: 6 (lower is better)
Translates to: FLTETRFSLCVF*TGIRDLASKHE
Trigger: TTCATGTTTAGATGCCAAGTCCCGAATTCCCGTCAAAAACACACACAGGGAGAACCTAGTTTCAGTCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS CAA 90 bp GAGTTAGAGTCTGGGAGTTTCTTCAGTGCTGGTTCTGGCAAAACATaGACTACCGAGTATACTGGCACTGTGATTATTGATGAAGTTACA +
Preference number: 6 (lower is better)
Translates to: ELESGSFFSAGSGKT*TTEYTGTVIIDEVT
Trigger: TGTAACTTCATCAATAATCACAGTGCCAGTATACTCGGTAGTCAATGTTTTGCCAGAACCAGCACTGAAGAAACTCCCAGACTCTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS GCA 72 bp TTTCTCGTGATGAGGTTGCCTTCTTCATCAGTAAATTaGTCTTCTGTGACAGATTCACCAGGGATGTTTTTG +
Preference number: 6 (lower is better)
Translates to: FLVMRLPSSSVN*SSVTDSPGMFL
Trigger: CAAAAACATCCCTGGTGAATCTGTCACAGAAGAGCAATTTACTGATGAAGAAGGCAACCTCATCACGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
CDS CAA 72 bp TCAGCCTTTTTATGTGCCGGCAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGTAATCCCTTTGTTGTC +
Preference number: 6 (lower is better)
Translates to: SAFLCAGRVIFK*QTAVWGNPFVV
Trigger: GACAACAAAGGGATTACCCCAAACAGCTGTTTGCAACTTAAATATTACTCTGCCGGCACATAAAAAGGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 22 transcripts:
ENSMUST00000047061.13
ENSMUST00000054167.15
ENSMUST00000092431.12
ENSMUST00000092432.12
ENSMUST00000092433.12
ENSMUST00000092434.12
ENSMUST00000181974.8
ENSMUST00000182029.8
ENSMUST00000182155.8
ENSMUST00000182269.8
ENSMUST00000182437.8
ENSMUST00000182439.8
ENSMUST00000182692.8
ENSMUST00000182795.8
ENSMUST00000182884.8
ENSMUST00000182972.8
ENSMUST00000182992.8
ENSMUST00000183074.8
ENSMUST00000183148.8
ENSMUST00000183169.8
ENSMUST00000183261.8
ENSMUST00000218680.2
CDS CAA 72 bp AAACTCAATATAGGCAACTCGGTTACATTTGGGTCTTaGGATAGAGTCTTTGCTCACGTCACGATCTGTTTC +
Preference number: 6 (lower is better)
Translates to: KLNIGNSVTFGS*DRVFAHVTICF
Trigger: GAAACAGATCGTGACGTGAGCAAAGACTCTATCCAAAGACCCAAATGTAACCGAGTTGCCTATATTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182665.8
ENSMUST00000186247.7
CDS CAA 72 bp GTCTCCTTTTTATGTGCCGGCAGAGTAATATTTAAGTaGCAAACAGCTGTTTGGGGTAATCCCTTTGTTGTC +
Preference number: 6 (lower is better)
Translates to: VSFLCAGRVIFK*QTAVWGNPFVV
Trigger: GACAACAAAGGGATTACCCCAAACAGCTGTTTGCAACTTAAATATTACTCTGCCGGCACATAAAAAGGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000182207.8
ENSMUST00000183082.8
ENSMUST00000186247.7
CDS CAA 72 bp TTTGGTCTCTCTAATAATGACTTCAGTGGGTTCGGCTaGGTTACCTTTTTCGATGTGCACTTCTATAATGCG +
Preference number: 6 (lower is better)
Translates to: FGLSNNDFSGFG*VTFFDVHFYNA
Trigger: CGCATTATAGAAGTGCACATCGAAAAAGGTAACCAAGCCGAACCCACTGAAGTCATTATTAGAGAGACCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7
CDS TCA 72 bp AATTTTGAACCATGTGCATTTATCACCTTCATCGTCTaGCATATCGAGGACTTCATTCATCGTTTCTGGGAC +
Preference number: 6 (lower is better)
Translates to: NFEPCAFITFIV*HIEDFIHRFWD
Trigger: GTCCCAGAAACGATGAATGAAGTCCTCGATATGTCAGACGATGAAGGTGATAAATGCACATGGTTCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000092431.12
CDS CAA 72 bp TCACTTTTCACCAAAACCTCCTGTACTTTGGGAATTTaGAACCATGTGCATTTATCACCTTCATCGTCTGAC +
Preference number: 6 (lower is better)
Translates to: SLFTKTSCTLGI*NHVHLSPSSSD
Trigger: GTCAGACGATGAAGGTGATAAATGCACATGGTTCAAAATTCCCAAAGTACAGGAGGTTTTGGTGAAAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000092431.12
CDS CAA 72 bp TCACTTTTCACCAAAACCTCCTGTACTTTGGGAATTTaGAACCATGTGCATTTATCACCTTCTTCACCGTCT +
Preference number: 6 (lower is better)
Translates to: SLFTKTSCTLGI*NHVHLSPSSPS
Trigger: AGACGGTGAAGAAGGTGATAAATGCACATGGTTCAAAATTCCCAAAGTACAGGAGGTTTTGGTGAAAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092434.12
ENSMUST00000182884.8
CDS CAA 90 bp ATGGCATCTTCACTTTTCACCAAAACCTCCTGTACTTTGGGAATTTaGAACCATGTGCATTTATCACCTTCTTCACCGTCTGAGATATAT +
Preference number: 6 (lower is better)
Translates to: MASSLFTKTSCTLGI*NHVHLSPSSPSEIY
Trigger: ATATATCTCAGACGGTGAAGAAGGTGATAAATGCACATGGTTCAAAATTCCCAAAGTACAGGAGGTTTTGGTGAAAAGTGAAGATGCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000092434.12
ENSMUST00000182884.8
CDS CAA 72 bp ACTTTGACTAAGTCTTCCTTCACTTTCTCAACGATTTaGAAAGGTTCTTCATCGTCTATTCTCCCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: TLTKSSFTFSTI*KGSSSSILPSL
Trigger: CAGAGAAGGGAGAATAGACGATGAAGAACCTTTCAAAATCGTTGAGAAAGTGAAGGAAGACTTAGTCAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182992.8
ENSMUST00000186247.7
CDS TCA 72 bp AAATATTCAATGGGATGTTTACATACCTCCTTAAGCTaGCTTTCTGTAACTTTAACGGTAGTGGTGGTAGTG +
Preference number: 6 (lower is better)
Translates to: KYSMGCLHTSLS*LSVTLTVVVVV
Trigger: CACTACCACCACTACCGTTAAAGTTACAGAAAGTCAGCTTAAGGAGGTATGTAAACATCCCATTGAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186247.7