Pregenerated sensors for ANK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022265Ensembl transcript IDs: ENSMUST00000022875.7
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGAGGCCCGCCTTCCGCCCTTTTCCCTCCGCCCTTCCCACCTTTaGCTGTCTACAGTAGTGGATCCATTTCCTCCCGAGGTTGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: QEARLPPFSLRPSHL*LSTVVDPFPPEVAH Trigger: ATGGGCAACCTCGGGAGGAAATGGATCCACTACTGTAGACAGGCAAAGGTGGGAAGGGCGGAGGGAAAAGGGCGGAAGGCGGGCCTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 90 bp | AGGCGAGTAAACGCAAGCCTTCAGGGAAACTCATGCGGAGGGTGCTaGCACTGGAGCTGCACTTGCGGGACAGCTCTGAAAAGTCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: RRVNASLQGNSCGGC*HWSCTCGTALKSQL Trigger: GAGCTGACTTTTCAGAGCTGTCCCGCAAGTGCAGCTCCAGTGTCAGCACCCTCCGCATGAGTTTCCCTGAAGGCTTGCGTTTACTCGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 90 bp | GAGAGGCTGAGCTTCAACCTGTTGATTCTTAGGAGGAGGCAAACATaGACAGGAAAAGTCTGGCCCAAGTCCTTTGGTTCCAAAGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: ERLSFNLLILRRRQT*TGKVWPKSFGSKVE Trigger: CTCCACTTTGGAACCAAAGGACTTGGGCCAGACTTTTCCTGTTCATGTTTGCCTCCTCCTAAGAATCAACAGGTTGAAGCTCAGCCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 90 bp | TGTGGGGTGCGGCAACTCAGTGAAACCAGGAAAACAATGGGATGCTaGCGATCAAGTCAGTTGGTGACTGACCCAATTTCTACAGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: CGVRQLSETRKTMGC*RSSQLVTDPISTGD Trigger: ATCTCCTGTAGAAATTGGGTCAGTCACCAACTGACTTGATCGTCAGCATCCCATTGTTTTCCTGGTTTCACTGAGTTGCCGCACCCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CCA 90 bp | AAGCACATAGGATTTGTTCCCATGGTGGGCACATATGAGGGACACTaGGTATCTAGAAATGGAAATGCGAGCCTGTGTAGCCCTGACAGT | + |
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Preference number: 1 (lower is better) Translates to: KHIGFVPMVGTYEGH*VSRNGNASLCSPDS Trigger: ACTGTCAGGGCTACACAGGCTCGCATTTCCATTTCTAGATACCCAGTGTCCCTCATATGTGCCCACCATGGGAACAAATCCTATGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CCA 90 bp | AAACATGAACAGGAAAAGTCTGGCCCAAGTCCTTTGGTTCCAAAGTaGAGATTGTCCAAGGGAGTAGAAACGTTGACCAAGAGGCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: KHEQEKSGPSPLVPK*RLSKGVETLTKRQL Trigger: GAGCTGCCTCTTGGTCAACGTTTCTACTCCCTTGGACAATCTCCACTTTGGAACCAAAGGACTTGGGCCAGACTTTTCCTGTTCATGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 90 bp | AACCAGGAAAACAATGGGATGCTGACGATCAAGTCAGTTGGTGACTaGCCCAATTTCTACAGGAGATTAAATTCCCACTACGTTGGCCCA | + |
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Preference number: 1 (lower is better) Translates to: NQENNGMLTIKSVGD*PNFYRRLNSHYVGP Trigger: TGGGCCAACGTAGTGGGAATTTAATCTCCTGTAGAAATTGGGTCAGTCACCAACTGACTTGATCGTCAGCATCCCATTGTTTTCCTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 90 bp | GTGAAACCAGGAAAACAATGGGATGCTGACGATCAAGTCAGTTGGTaGCTGACCCAATTTCTACAGGAGATTAAATTCCCACTACGTTGG | + |
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Preference number: 1 (lower is better) Translates to: VKPGKQWDADDQVSW*LTQFLQEIKFPLRW Trigger: CCAACGTAGTGGGAATTTAATCTCCTGTAGAAATTGGGTCAGTCACCAACTGACTTGATCGTCAGCATCCCATTGTTTTCCTGGTTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR GCA 90 bp | GATTCTGAGTTACAAAGCGACAGTAAAGACCTTTCTTCAGGTCCCTaGATCGGTGAGCATACCCAGTATGCTAGAGAATTTATACGAAAC | + |
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Preference number: 1 (lower is better) Translates to: DSELQSDSKDLSSGP*IGEHTQYAREFIRN Trigger: GTTTCGTATAAATTCTCTAGCATACTGGGTATGCTCACCGATGCAGGGACCTGAAGAAAGGTCTTTACTGTCGCTTTGTAACTCAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 90 bp | CCTGGCATTAGGATGCTAGATTACGACTTAAAGCTTTGCTCACTGTaGAAACGAAATGGACAGTTAGAGAAATGGACAGTTAGAACGCTC | + |
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Preference number: 1 (lower is better) Translates to: PGIRMLDYDLKLCSL*KRNGQLEKWTVRTL Trigger: GAGCGTTCTAACTGTCCATTTCTCTAACTGTCCATTTCGTTTTCACAGTGAGCAAAGCTTTAAGTCGTAATCTAGCATCCTAATGCCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR-3UTR GCA 90 bp | CTCCGCCCTTCCCACCTTTGCCTGTCTACAGTAGTGGATCCATTTCCTCCCGAGTGTCCTGACTGTCCCTaGGGTGGCCCCCAGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LRPSHLCLSTVVDPFPPECPDCP*GGPQQP Trigger: AGGCTGCTGGGGGCCACCGCAGGGACAGTCAGGACA...CTCGGGAGGAAATGGATCCACTACTGTAGACAGGCAAAGGTGGGAAGGGCGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CAA 90 bp | ACAAGAGGCCCGCCTTCCGCCCTTTTCCCTCCGCCCTTCCCACCTTaGCCTGTCTACAGTAGTGGATCCATTTCCTCCCGAGGTTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: TRGPPSALFPPPFPP*PVYSSGSISSRGCP Trigger: TGGGCAACCTCGGGAGGAAATGGATCCACTACTGTAGACAGGCAAAGGTGGGAAGGGCGGAGGGAAAAGGGCGGAAGGCGGGCCTCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR-3UTR TCA 90 bp | CCACTACGTTGGCCCAGCAGGGCCACCAGCCCTTCCTCTGGGAACAGGGAGACTGCGGCAGATAGTTCATaGCTCCAGAGCCACAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: PLRWPSRATSPSSGNRETAADSS*LQSHSV Trigger: AACACTGTGGCTCTGGAGTCATGAACTATCTGCCGC...AGTCTCCCTGTTCCCAGAGGAAGGGCTGGTGGCCCTGCTGGGCCAACGTAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR-3UTR GCA 90 bp | CCATCTTCAGGGAAGGCGAGTAAACGCAAGCCTTCAGGGAAACTCATGCGGAGGCACTGGAGCTGCACTTaGGGGACAGCTCTGAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: PSSGKASKRKPSGKLMRRHWSCT*GTALKS Trigger: ACTTTTCAGAGCTGTCCCGCAAGTGCAGCTCCAGTG...CCTCCGCATGAGTTTCCCTGAAGGCTTGCGTTTACTCGCCTTCCCTGAAGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CAA 90 bp | CCTTCAGGGAAACTCATGCGGAGGGTGCTGACACTGGAGCTGCACTaGCGGGACAGCTCTGAAAAGTCAGCTCATGTATATACACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PSGKLMRRVLTLELH*RDSSEKSAHVYTLW Trigger: CCACAGTGTATATACATGAGCTGACTTTTCAGAGCTGTCCCGCAAGTGCAGCTCCAGTGTCAGCACCCTCCGCATGAGTTTCCCTGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR-3UTR CCA 90 bp | ACGAGACAAGACCCTGGCATTAGGATGCTAGATTACGACTTAAAGCTTTGCTCACTGTGGGCTGCAGCCTaGGGCCCACCAGTATGTGCG | + |
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Preference number: 2 (lower is better) Translates to: TRQDPGIRMLDYDLKLCSLWAAA*GPPVCA Trigger: CGCACATACTGGTGGGCCCCAGGCTGCAGCCCACAG...TGAGCAAAGCTTTAAGTCGTAATCTAGCATCCTAATGCCAGGGTCTTGTCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR-3UTR TCA 90 bp | ACGAGACAAGACCCTGGCATTAGGATGCTAGATTACGACTTAAAGCTTTGCTCACGACAGTTGTTGTCCTaGCTGTCCCTGCGGTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: TRQDPGIRMLDYDLKLCSRQLLS*LSLRWP Trigger: GGGCCACCGCAGGGACAGTCAGGACAACAACTGTCG...TGAGCAAAGCTTTAAGTCGTAATCTAGCATCCTAATGCCAGGGTCTTGTCTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CAA 90 bp | CACCAGTATGTGCGGCAGATAGTTCATGACTCCAGAGCCACAGTGTaGGGGAGCAAGTCAAGAGAGGCTGAGCTTCAACCTGTTGATTCT | + |
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Preference number: 2 (lower is better) Translates to: HQYVRQIVHDSRATV*GSKSREAELQPVDS Trigger: AGAATCAACAGGTTGAAGCTCAGCCTCTCTTGACTTGCTCCCCAACACTGTGGCTCTGGAGTCATGAACTATCTGCCGCACATACTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR-3UTR CCA 90 bp | AAGACTTTCAGTTATCTTTCAGATCTGCCCCTGACGTCACCCACAAGCAGCTACCCAGAGCCACAGTGTTaGGGAGCAAGTCAAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: KTFSYLSDLPLTSPTSSYPEPQC*GASQER Trigger: CCTCTCTTGACTTGCTCCCCAACACTGTGGCTCTGG...GTAGCTGCTTGTGGGTGACGTCAGGGGCAGATCTGAAAGATAACTGAAAGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CAA 90 bp | TTAGGAGGAGGCAAACATGAACAGGAAAAGTCTGGCCCAAGTCCTTaGGTTCCAAAGTGGAGATTGTCCAAGGGAGTAGAAACGTTGACC | + |
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Preference number: 2 (lower is better) Translates to: LGGGKHEQEKSGPSP*VPKWRLSKGVETLT Trigger: GGTCAACGTTTCTACTCCCTTGGACAATCTCCACTTTGGAACCAAAGGACTTGGGCCAGACTTTTCCTGTTCATGTTTGCCTCCTCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CAA 90 bp | TTGTCCAAGGGAGTAGAAACGTTGACCAAGAGGCAGCTCTATCTTTaGGGTTTTATGAAGCAGGGGCGTGAAGTCAGCGATTCTGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: LSKGVETLTKRQLYL*GFMKQGREVSDSEL Trigger: TAACTCAGAATCGCTGACTTCACGCCCCTGCTTCATAAAACCCAAAAGATAGAGCTGCCTCTTGGTCAACGTTTCTACTCCCTTGGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CAA 90 bp | AGTCCTTTGGTTCCAAAGTGGAGATTGTCCAAGGGAGTAGAAACGTaGACCAAGAGGCAGCTCTATCTTTTGGGTTTTATGAAGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SPLVPKWRLSKGVET*TKRQLYLLGFMKQG Trigger: CCCCTGCTTCATAAAACCCAAAAGATAGAGCTGCCTCTTGGTCAACGTTTCTACTCCCTTGGACAATCTCCACTTTGGAACCAAAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR-3UTR CCA 90 bp | AAGACTTTCAGTTATCTTTCAGATCTGCCCCTGACGTCACCCACAAGCAGCTACAAATGTCTTGCTTTATaGTGTGGAGGGGAGTACCAT | + |
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Preference number: 2 (lower is better) Translates to: KTFSYLSDLPLTSPTSSYKCLAL*CGGEYH Trigger: ATGGTACTCCCCTCCACACCATAAAGCAAGACATTT...GTAGCTGCTTGTGGGTGACGTCAGGGGCAGATCTGAAAGATAACTGAAAGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR-3UTR GCA 90 bp | ACAATTAAGACTTTCAGTTATCTTTCAGATCTGCCCCTGACGTCACCCACAAGCGTTTATAAAATGTCTTaGTTTATGGTGTGGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: TIKTFSYLSDLPLTSPTSVYKMS*FMVWRG Trigger: TCCCCTCCACACCATAAAGCAAGACATTTTATAAAC...GCTTGTGGGTGACGTCAGGGGCAGATCTGAAAGATAACTGAAAGTCTTAATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR-3UTR CCA 90 bp | AGATTACGACTTAAAGCTTTGCTCACTGTGAAAACGAAATGGACAGTTAGAGAACCTTTGGTTCCAAAGTaGAGATTGTCCAAGGGAGTA | + |
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Preference number: 2 (lower is better) Translates to: RLRLKALLTVKTKWTVREPLVPK*RLSKGV Trigger: TACTCCCTTGGACAATCTCCACTTTGGAACCAAAGG...TTCTCTAACTGTCCATTTCGTTTTCACAGTGAGCAAAGCTTTAAGTCGTAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR GCA 72 bp | CGCCTTCCGCCCTTTTCCCTCCGCCCTTCCCACCTTTaGCTGTCTACAGTAGTGGATCCATTTCCTCCCGAG | + |
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Preference number: 3 (lower is better) Translates to: RLPPFSLRPSHL*LSTVVDPFPPE Trigger: CTCGGGAGGAAATGGATCCACTACTGTAGACAGGCAAAGGTGGGAAGGGCGGAGGGAAAAGGGCGGAAGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR-3UTR CAA 90 bp | CCACTACGTTGGCCCAGCAGGGCCACCAGCCCTTCCTCTGGGAACAGGGAGACTCTGAGCTTCAACCTGTaGATTCTTAGGAGGAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: PLRWPSRATSPSSGNRETLSFNL*ILRRRQ Trigger: TTGCCTCCTCCTAAGAATCAACAGGTTGAAGCTCAG...AGTCTCCCTGTTCCCAGAGGAAGGGCTGGTGGCCCTGCTGGGCCAACGTAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 72 bp | GCCTGGGGCCCACCAGTATGTGCGGCAGATAGTTCATaGCTCCAGAGCCACAGTGTTGGGGAGCAAGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: AWGPPVCAADSS*LQSHSVGEQVK Trigger: CTTGACTTGCTCCCCAACACTGTGGCTCTGGAGTCATGAACTATCTGCCGCACATACTGGTGGGCCCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 72 bp | AACGCAAGCCTTCAGGGAAACTCATGCGGAGGGTGCTaGCACTGGAGCTGCACTTGCGGGACAGCTCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: NASLQGNSCGGC*HWSCTCGTALK Trigger: TTTCAGAGCTGTCCCGCAAGTGCAGCTCCAGTGTCAGCACCCTCCGCATGAGTTTCCCTGAAGGCTTGCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CCA 72 bp | ACCCAATTTCTACAGGAGATTAAATTCCCACTACGTTaGCCCAGCAGGGCCACCAGCCCTTCCTCTGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: TQFLQEIKFPLR*PSRATSPSSGN Trigger: GTTCCCAGAGGAAGGGCTGGTGGCCCTGCTGGGCCAACGTAGTGGGAATTTAATCTCCTGTAGAAATTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR GCA 72 bp | GGAGGGGAGTACCATAGTACACTCGGTTACCTGTCCTaGAGAAATAGGCGGCACATCTACATCAGAAGTTAC | + |
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Preference number: 3 (lower is better) Translates to: GGEYHSTLGYLS*RNRRHIYIRSY Trigger: GTAACTTCTGATGTAGATGTGCCGCCTATTTCTGCAGGACAGGTAACCGAGTGTACTATGGTACTCCCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CCA 72 bp | GGATTTGTTCCCATGGTGGGCACATATGAGGGACACTaGGTATCTAGAAATGGAAATGCGAGCCTGTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: GFVPMVGTYEGH*VSRNGNASLCS Trigger: GCTACACAGGCTCGCATTTCCATTTCTAGATACCCAGTGTCCCTCATATGTGCCCACCATGGGAACAAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 72 bp | GCTCATGTATATACACTGTGGGGTGCGGCAACTCAGTaGAACCAGGAAAACAATGGGATGCTGACGATCAAG | + |
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Preference number: 3 (lower is better) Translates to: AHVYTLWGAATQ*NQENNGMLTIK Trigger: CTTGATCGTCAGCATCCCATTGTTTTCCTGGTTTCACTGAGTTGCCGCACCCCACAGTGTATATACATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CCA 72 bp | CAGGAAAAGTCTGGCCCAAGTCCTTTGGTTCCAAAGTaGAGATTGTCCAAGGGAGTAGAAACGTTGACCAAG | + |
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Preference number: 3 (lower is better) Translates to: QEKSGPSPLVPK*RLSKGVETLTK Trigger: CTTGGTCAACGTTTCTACTCCCTTGGACAATCTCCACTTTGGAACCAAAGGACTTGGGCCAGACTTTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 72 bp | AGCTTCAACCTGTTGATTCTTAGGAGGAGGCAAACATaGACAGGAAAAGTCTGGCCCAAGTCCTTTGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: SFNLLILRRRQT*TGKVWPKSFGS Trigger: GGAACCAAAGGACTTGGGCCAGACTTTTCCTGTTCATGTTTGCCTCCTCCTAAGAATCAACAGGTTGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR GCA 72 bp | TTACAAAGCGACAGTAAAGACCTTTCTTCAGGTCCCTaGATCGGTGAGCATACCCAGTATGCTAGAGAATTT | + |
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Preference number: 3 (lower is better) Translates to: LQSDSKDLSSGP*IGEHTQYAREF Trigger: AAATTCTCTAGCATACTGGGTATGCTCACCGATGCAGGGACCTGAAGAAAGGTCTTTACTGTCGCTTTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 72 bp | AACAATGGGATGCTGACGATCAAGTCAGTTGGTGACTaGCCCAATTTCTACAGGAGATTAAATTCCCACTAC | + |
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Preference number: 3 (lower is better) Translates to: NNGMLTIKSVGD*PNFYRRLNSHY Trigger: GTAGTGGGAATTTAATCTCCTGTAGAAATTGGGTCAGTCACCAACTGACTTGATCGTCAGCATCCCATTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 72 bp | GGAAAACAATGGGATGCTGACGATCAAGTCAGTTGGTaGCTGACCCAATTTCTACAGGAGATTAAATTCCCA | + |
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Preference number: 3 (lower is better) Translates to: GKQWDADDQVSW*LTQFLQEIKFP Trigger: TGGGAATTTAATCTCCTGTAGAAATTGGGTCAGTCACCAACTGACTTGATCGTCAGCATCCCATTGTTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR TCA 72 bp | AGGATGCTAGATTACGACTTAAAGCTTTGCTCACTGTaGAAACGAAATGGACAGTTAGAGAAATGGACAGTT | + |
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Preference number: 3 (lower is better) Translates to: RMLDYDLKLCSL*KRNGQLEKWTV Trigger: AACTGTCCATTTCTCTAACTGTCCATTTCGTTTTCACAGTGAGCAAAGCTTTAAGTCGTAATCTAGCATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CAA 72 bp | CCGCCTTCCGCCCTTTTCCCTCCGCCCTTCCCACCTTaGCCTGTCTACAGTAGTGGATCCATTTCCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: PPSALFPPPFPP*PVYSSGSISSR Trigger: TCGGGAGGAAATGGATCCACTACTGTAGACAGGCAAAGGTGGGAAGGGCGGAGGGAAAAGGGCGGAAGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR GCA 90 bp | CCATCTTCAGGGAAGGCGAGTAAACGCAAGCCTTCAGGGAAACTCATGCGGAGGGGCCGACTGATTCGCTaGGTGGCCAGGATCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PSSGKASKRKPSGKLMRRGRLIR*VARIRA Trigger: GGCTCTGATCCTGGCCACGCAGCGAATCAGTCGGCC...CCTCCGCATGAGTTTCCCTGAAGGCTTGCGTTTACTCGCCTTCCCTGAAGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR CCA 90 bp | CCATCTTCAGGGAAGGCGAGTAAACGCAAGCCTTCAGGGAAACTCATGCGGAGGAGCCCAGGCACAGTGTaGTGCAGCGCACAAGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: PSSGKASKRKPSGKLMRRSPGTV*CSAQAH Trigger: GTGCGCTTGTGCGCTGCACCACACTGTGCCTGGGCT...CCTCCGCATGAGTTTCCCTGAAGGCTTGCGTTTACTCGCCTTCCCTGAAGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR TCA 90 bp | CTCCGCCCTTCCCACCTTTGCCTGTCTACAGTAGTGGATCCATTTCCTCCCGAGCCAGGCCCACATTTTTaGAGTCACTCATGGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: LRPSHLCLSTVVDPFPPEPGPHF*SHSWAP Trigger: CGGGGCCCATGAGTGACTTCAAAAATGTGGGCCTGG...CTCGGGAGGAAATGGATCCACTACTGTAGACAGGCAAAGGTGGGAAGGGCGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR GCA 90 bp | CCACTACGTTGGCCCAGCAGGGCCACCAGCCCTTCCTCTGGGAACAGGGAGACTTCGATAGACATAGCATaGTGCAAGGGCAACCATGGT | + |
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Preference number: 4 (lower is better) Translates to: PLRWPSRATSPSSGNRETSIDIA*CKGNHG Trigger: ACCATGGTTGCCCTTGCAGCATGCTATGTCTATCGA...AGTCTCCCTGTTCCCAGAGGAAGGGCTGGTGGCCCTGCTGGGCCAACGTAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR CCA 90 bp | CTCCGCCCTTCCCACCTTTGCCTGTCTACAGTAGTGGATCCATTTCCTCCCGAGTGCAGAGGACGGCTTTaGCCCTGTCTCTCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LRPSHLCLSTVVDPFPPECRGRL*PCLSCC Trigger: ACAGCAAGAGAGACAGGGCCAAAGCCGTCCTCTGCA...CTCGGGAGGAAATGGATCCACTACTGTAGACAGGCAAAGGTGGGAAGGGCGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR TCA 90 bp | CTCCGCCCTTCCCACCTTTGCCTGTCTACAGTAGTGGATCCATTTCCTCCCGAGCTTCTTGATGTGGGCTaGGGTGACCGTGTTGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LRPSHLCLSTVVDPFPPELLDVG*GDRVAC Trigger: ACAAGCAACACGGTCACCTCAGCCCACATCAAGAAG...CTCGGGAGGAAATGGATCCACTACTGTAGACAGGCAAAGGTGGGAAGGGCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR TCA 90 bp | GATGGGAGGAGGAGGAGGAAAGAGACGACAGTTGTTGTCCTGACTGTCCCTGCGTTCTCCCTCGGTGGCTaGCTCATTCTCCATCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: DGRRRRKETTVVVLTVPAFSLGG*LILHLL Trigger: AAGAAGATGGAGAATGAGTCAGCCACCGAGGGAGAA...CGCAGGGACAGTCAGGACAACAACTGTCGTCTCTTTCCTCCTCCTCCTCCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR GCA 90 bp | GAGGAGGAGGAAAGAGACGACAGTTGTTGTCCTGACTGTCCCTGCGGTGGCCCCTGTGTTTTAAGAGAATaGCAGCATGAGTCCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EEEERDDSCCPDCPCGGPCVLRE*QHESTP Trigger: TGGCGTGGACTCATGCTGGCATTCTCTTAAAACACA...GGGGCCACCGCAGGGACAGTCAGGACAACAACTGTCGTCTCTTTCCTCCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR GCA 90 bp | GAGGAGGAGGAAAGAGACGACAGTTGTTGTCCTGACTGTCCCTGCGGTGGCCCCATAGACATAGCATGCTaGAAGGGCAACCATGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EEEERDDSCCPDCPCGGPIDIAC*KGNHGR Trigger: TCTACCATGGTTGCCCTTGCAGCATGCTATGTCTAT...GGGGCCACCGCAGGGACAGTCAGGACAACAACTGTCGTCTCTTTCCTCCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| 3UTR CAA 72 bp | GTGCGGCAGATAGTTCATGACTCCAGAGCCACAGTGTaGGGGAGCAAGTCAAGAGAGGCTGAGCTTCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: VRQIVHDSRATV*GSKSREAELQP Trigger: AGGTTGAAGCTCAGCCTCTCTTGACTTGCTCCCCAACACTGTGGCTCTGGAGTCATGAACTATCTGCCGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR TCA 90 bp | AAGACTTTCAGTTATCTTTCAGATCTGCCCCTGACGTCACCCACAAGCAGCTACCGATGGCTATGTTGGTaGTGCCGAGGGGCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTFSYLSDLPLTSPTSSYRWLCW*CRGAPG Trigger: TCCTGGTGCCCCTCGGCATCACCAACATAGCCATCG...GTAGCTGCTTGTGGGTGACGTCAGGGGCAGATCTGAAAGATAACTGAAAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR TCA 90 bp | CCCAAGTCCTTTGGTTCCAAAGTGGAGATTGTCCAAGGGAGTAGAAACGTTGACCTACTGCATCCTCCTTaGCTGCAGCGATGCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PKSFGSKVEIVQGSRNVDLLHPP*LQRCPG Trigger: ACCGGGGCATCGCTGCAGTCAAGGAGGATGCAGTAG...GTCAACGTTTCTACTCCCTTGGACAATCTCCACTTTGGAACCAAAGGACTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CCA 90 bp | CCATCTTCAGGGAAGGCGAGTAAACGCAAGCCTTCAGGGAAACTCATGCGGAGGAGCTCTCACAGTCACTaGCACTGGGAAGAAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSSGKASKRKPSGKLMRRSSHSH*HWEEGE Trigger: TTCTCCTTCTTCCCAGTGCCAGTGACTGTGAGAGCT...CCTCCGCATGAGTTTCCCTGAAGGCTTGCGTTTACTCGCCTTCCCTGAAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR TCA 90 bp | ACGAGACAAGACCCTGGCATTAGGATGCTAGATTACGACTTAAAGCTTTGCTCAGGGGCCAGTAGTGCGTaGGCGCCGGGAATTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TRQDPGIRMLDYDLKLCSGASSA*APGISP Trigger: TGGTGAAATTCCCGGCGCTCACGCACTACTGGCCCC...TGAGCAAAGCTTTAAGTCGTAATCTAGCATCCTAATGCCAGGGTCTTGTCTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR GCA 90 bp | CTCCGCCCTTCCCACCTTTGCCTGTCTACAGTAGTGGATCCATTTCCTCCCGAGAATGACACAGAGTTCTaGAAAGGCAAAGTCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRPSHLCLSTVVDPFPPENDTEF*KGKVHS Trigger: GGAGTGGACTTTGCCTTTGCAGAACTCTGTGTCATT...CTCGGGAGGAAATGGATCCACTACTGTAGACAGGCAAAGGTGGGAAGGGCGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR TCA 90 bp | CCCAAGTCCTTTGGTTCCAAAGTGGAGATTGTCCAAGGGAGTAGAAACGTTGACAAGAGAATGCCAGCATaGGTCCACGCCATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PKSFGSKVEIVQGSRNVDKRMPA*VHAMAS Trigger: GGATGCCATGGCGTGGACTCATGCTGGCATTCTCTT...GTCAACGTTTCTACTCCCTTGGACAATCTCCACTTTGGAACCAAAGGACTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR TCA 90 bp | GTCCCTGCATCGGTGAGCATACCCAGTATGCTAGAGAATTTATACGAAACCTCTGAGACAGGATGGGGATaGGCAGCGGTTCTCGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: VPASVSIPSMLENLYETSETGWG*AAVLGI Trigger: AATGCCGAGAACCGCTGCTCATCCCCATCCTGTCTC...AGAGGTTTCGTATAAATTCTCTAGCATACTGGGTATGCTCACCGATGCAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR GCA 90 bp | CCCAAGTCCTTTGGTTCCAAAGTGGAGATTGTCCAAGGGAGTAGAAACGTTGACTGCATCCTCCTTGACTaGAGCGATGCCCCGGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PKSFGSKVEIVQGSRNVDCILLD*SDAPVQ Trigger: TTGAACCGGGGCATCGCTGCAGTCAAGGAGGATGCA...GTCAACGTTTCTACTCCCTTGGACAATCTCCACTTTGGAACCAAAGGACTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR GCA 90 bp | GAGATTGTCCAAGGGAGTAGAAACGTTGACCAAGAGGCAGCTCTATCTTTTGGGTGGCCCTGTCTCTCTTaGTGTTCACGAACACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EIVQGSRNVDQEAALSFGWPCLS*CSRTPG Trigger: GCCTGGTGTTCGTGAACAGCAAGAGAGACAGGGCCA...CCCAAAAGATAGAGCTGCCTCTTGGTCAACGTTTCTACTCCCTTGGACAATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CCA 90 bp | CCCAAGTCCTTTGGTTCCAAAGTGGAGATTGTCCAAGGGAGTAGAAACGTTGACACGCCAGCCCGTAGCTaGCCAGCATTTCTACTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PKSFGSKVEIVQGSRNVDTPARS*PAFLLH Trigger: ATGCAGTAGAAATGCTGGCCAGCTACGGGCTGGCGT...GTCAACGTTTCTACTCCCTTGGACAATCTCCACTTTGGAACCAAAGGACTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CCA 90 bp | GATGGGAGGAGGAGGAGGAAAGAGACGACAGTTGTTGTCCTGACTGTCCCTGCGGACTGTGAAGCAAAATaGCTACGAAAACAACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DGRRRRKETTVVVLTVPADCEAK*LRKQPE Trigger: CTCAGGTTGTTTTCGTAGCCATTTTGCTTCACAGTC...CGCAGGGACAGTCAGGACAACAACTGTCGTCTCTTTCCTCCTCCTCCTCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR TCA 90 bp | GAGATTGTCCAAGGGAGTAGAAACGTTGACCAAGAGGCAGCTCTATCTTTTGGGTCTCTACGATGTCTGTaGCCTCCTCTGTTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EIVQGSRNVDQEAALSFGSLRCL*PPLLEA Trigger: TGCCTCCAACAGAGGAGGTCACAGACATCGTAGAGA...CCCAAAAGATAGAGCTGCCTCTTGGTCAACGTTTCTACTCCCTTGGACAATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR GCA 90 bp | AGATTACGACTTAAAGCTTTGCTCACTGTGAAAACGAAATGGACAGTTAGAGAACACCGGCCACCACCATaGAGAGGACGGCTTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLRLKALLTVKTKWTVREHRPPP*RGRLWP Trigger: GGGCCAAAGCCGTCCTCTGCATGGTGGTGGCCGGTG...TTCTCTAACTGTCCATTTCGTTTTCACAGTGAGCAAAGCTTTAAGTCGTAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGCATCGGTGAGCATACCCAGTATGCTAGAGAATTTATACGAAACCTCTTGTCAGAATGGCCACTaGCTCTGTAGCAGCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPASVSIPSMLENLYETSCQNGH*LCSSRA Trigger: AGCTCTGCTGCTACAGAGGCAGTGGCCATTCTGACA...AGAGGTTTCGTATAAATTCTCTAGCATACTGGGTATGCTCACCGATGCAGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CCA 90 bp | AGATTACGACTTAAAGCTTTGCTCACTGTGAAAACGAAATGGACAGTTAGAGAAGGAAGACGGCAGCGATaGCACCGGCCACCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RLRLKALLTVKTKWTVREGRRQR*HRPPPC Trigger: GCATGGTGGTGGCCGGTGCCATCGCTGCCGTCTTCC...TTCTCTAACTGTCCATTTCGTTTTCACAGTGAGCAAAGCTTTAAGTCGTAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR CCA 90 bp | GAGATTGTCCAAGGGAGTAGAAACGTTGACCAAGAGGCAGCTCTATCTTTTGGGAGTCTTCTCCCTCGGTaGCTGACTCATTCTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EIVQGSRNVDQEAALSFGSLLPR*LTHSPS Trigger: AGATGGAGAATGAGTCAGCCACCGAGGGAGAAGACT...CCCAAAAGATAGAGCTGCCTCTTGGTCAACGTTTCTACTCCCTTGGACAATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| 3UTR CAA 72 bp | GGAGTAGAAACGTTGACCAAGAGGCAGCTCTATCTTTaGGGTTTTATGAAGCAGGGGCGTGAAGTCAGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVETLTKRQLYL*GFMKQGREVSD Trigger: ATCGCTGACTTCACGCCCCTGCTTCATAAAACCCAAAAGATAGAGCTGCCTCTTGGTCAACGTTTCTACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CCA 90 bp | ACAATTAAGACTTTCAGTTATCTTTCAGATCTGCCCCTGACGTCACCCACAAGCGTGAACTTCTTGATGTaGGCTGAGGTGACCGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TIKTFSYLSDLPLTSPTSVNFLM*AEVTVL Trigger: CAACACGGTCACCTCAGCCCACATCAAGAAGTTCAC...GCTTGTGGGTGACGTCAGGGGCAGATCTGAAAGATAACTGAAAGTCTTAATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CCA 90 bp | TCGGTGAGCATACCCAGTATGCTAGAGAATTTATACGAAACCTCTAAATCAAGGTGTGACCTCCTCTGTTaGAGGCATGTCGGTCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVSIPSMLENLYETSKSRCDLLC*RHVGHG Trigger: GCCATGACCGACATGCCTCCAACAGAGGAGGTCACA...CCTTGATTTAGAGGTTTCGTATAAATTCTCTAGCATACTGGGTATGCTCACCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CAA 72 bp | GGCAAACATGAACAGGAAAAGTCTGGCCCAAGTCCTTaGGTTCCAAAGTGGAGATTGTCCAAGGGAGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKHEQEKSGPSP*VPKWRLSKGVE Trigger: TTCTACTCCCTTGGACAATCTCCACTTTGGAACCAAAGGACTTGGGCCAGACTTTTCCTGTTCATGTTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR GCA 90 bp | GAGATTGTCCAAGGGAGTAGAAACGTTGACCAAGAGGCAGCTCTATCTTTTGGGTGTTCGCCAGTTTATTaGTGGGGTTATTCTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EIVQGSRNVDQEAALSFGCSPVY*WGYSCQ Trigger: TTGACAAGAATAACCCCAGCAATAAACTGGCGAACA...CCCAAAAGATAGAGCTGCCTCTTGGTCAACGTTTCTACTCCCTTGGACAATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| 3UTR CAA 72 bp | GTTCCAAAGTGGAGATTGTCCAAGGGAGTAGAAACGTaGACCAAGAGGCAGCTCTATCTTTTGGGTTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: VPKWRLSKGVET*TKRQLYLLGFM Trigger: CATAAAACCCAAAAGATAGAGCTGCCTCTTGGTCAACGTTTCTACTCCCTTGGACAATCTCCACTTTGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR GCA 90 bp | AGATTACGACTTAAAGCTTTGCTCACTGTGAAAACGAAATGGACAGTTAGAGAAGGCCAGCATTTCTACTaGATCCTCCTTGACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLRLKALLTVKTKWTVREGQHFY*ILLDCS Trigger: GCTGCAGTCAAGGAGGATGCAGTAGAAATGCTGGCC...TTCTCTAACTGTCCATTTCGTTTTCACAGTGAGCAAAGCTTTAAGTCGTAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR TCA 90 bp | CTGTGTAGCCCTGACAGTCTTAACATGAGGTTACACAACACCAAAATAATAAGCGCTACGAAAACAACCTaGGCTATGACATCTGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LCSPDSLNMRLHNTKIISATKTT*AMTSEI Trigger: AATCTCAGATGTCATAGCTCAGGTTGTTTTCGTAGC...GCTTATTATTTTGGTGTTGTGTAACCTCATGTTAAGACTGTCAGGGCTACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 90 bp | CGCCAGCCCGTAGCTGGCCAGCATTTCTACTGCATCCTCCTTGACTaGAGCGATGCCCCGGTTCAAGGCCTGCTCCCCGAAGTCGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQPVAGQHFYCILLD*SDAPVQGLLPEVDG Trigger: GCCATCGACTTCGGGGAGCAGGCCTTGAACCGGGGCATCGCTGCAGTCAAGGAGGATGCAGTAGAAATGCTGGCCAGCTACGGGCTGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 90 bp | CCCACAAACCCTGCTAGAAGGGAGCCCACACCTAGTGTGGCTCCGTaGACCCCCAGGTACGGCAGGACCACAAGGCTGGTGATGAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: PTNPARREPTPSVAP*TPRYGRTTRLVMRT Trigger: CGTCCTCATCACCAGCCTTGTGGTCCTGCCGTACCTGGGGGTGCACGGAGCCACACTAGGTGTGGGCTCCCTTCTAGCAGGGTTTGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 90 bp | AGGTCCCGGGACACGAAGAGGTTGACAATGGGCCGACTGATTCGCTaGGTGGCCAGGATCAGAGCCAGGGGCCACCAGAAGCTCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: RSRDTKRLTMGRLIR*VARIRARGHQKLSI Trigger: GATGCTGAGCTTCTGGTGGCCCCTGGCTCTGATCCTGGCCACGCAGCGAATCAGTCGGCCCATTGTCAACCTCTTCGTGTCCCGGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CCA 90 bp | ACCCTAAGTCACTGTAGGCTATCAGGGTGTGGAAGACGGCAGCGATaGCACCGGCCACCACCATGCAGAGGACGGCTTTGGCCCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLSHCRLSGCGRRQR*HRPPPCRGRLWPCL Trigger: GAGACAGGGCCAAAGCCGTCCTCTGCATGGTGGTGGCCGGTGCCATCGCTGCCGTCTTCCACACCCTGATAGCCTACAGTGACTTAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS TCA 90 bp | AATACGCCAGCCCGTAGCTGGCCAGCATTTCTACTGCATCCTCCTTaGCTGCAGCGATGCCCCGGTTCAAGGCCTGCTCCCCGAAGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: NTPARSWPAFLLHPP*LQRCPGSRPAPRSR Trigger: TCGACTTCGGGGAGCAGGCCTTGAACCGGGGCATCGCTGCAGTCAAGGAGGATGCAGTAGAAATGCTGGCCAGCTACGGGCTGGCGTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 90 bp | CTATCAGGGTGTGGAAGACGGCAGCGATGGCACCGGCCACCACCATaGAGAGGACGGCTTTGGCCCTGTCTCTCTTGCTGTTCACGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LSGCGRRQRWHRPPP*RGRLWPCLSCCSRT Trigger: TGTTCGTGAACAGCAAGAGAGACAGGGCCAAAGCCGTCCTCTGCATGGTGGTGGCCGGTGCCATCGCTGCCGTCTTCCACACCCTGATAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CCA 90 bp | AGACGGCAGCGATGGCACCGGCCACCACCATGCAGAGGACGGCTTTaGCCCTGTCTCTCTTGCTGTTCACGAACACCAGGCCCACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: RRQRWHRPPPCRGRL*PCLSCCSRTPGPHF Trigger: AAAATGTGGGCCTGGTGTTCGTGAACAGCAAGAGAGACAGGGCCAAAGCCGTCCTCTGCATGGTGGTGGCCGGTGCCATCGCTGCCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 90 bp | ATATGGCATATGACCCACGGGGTAGGTGGCTGTCAGAATGGCCACTaGCTCTGTAGCAGCAGAGCTGCCACCAAGGTCCCGGGACACGAA | + |
|
Preference number: 5 (lower is better) Translates to: IWHMTHGVGGCQNGH*LCSSRAATKVPGHE Trigger: TTCGTGTCCCGGGACCTTGGTGGCAGCTCTGCTGCTACAGAGGCAGTGGCCATTCTGACAGCCACCTACCCCGTGGGTCATATGCCATAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 90 bp | CTTCATCAAAGAATACGCCAGCCCGTAGCTGGCCAGCATTTCTACTaGATCCTCCTTGACTGCAGCGATGCCCCGGTTCAAGGCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LHQRIRQPVAGQHFY*ILLDCSDAPVQGLL Trigger: GAGCAGGCCTTGAACCGGGGCATCGCTGCAGTCAAGGAGGATGCAGTAGAAATGCTGGCCAGCTACGGGCTGGCGTATTCTTTGATGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS-3UTR CAA 90 bp | GATGGGAGGAGGAGGAGGAAAGAGACGACAGTTGTTGTCCTGACTGTCCCTGCGACCAGGCCCACATTTTaGAAGTCACTCATGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DGRRRRKETTVVVLTVPATRPTF*KSLMGP Trigger: GGGGCCCATGAGTGACTTCAAAAATGTGGGCCTGGT...CGCAGGGACAGTCAGGACAACAACTGTCGTCTCTTTCCTCCTCCTCCTCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGAGGAAAGAGACGACAGTTGTTGTCCTGACTGTCCCTGCGGTGGCCCCACAAAGGTGAACTTCTaGATGTGGGCTGAGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: EEEERDDSCCPDCPCGGPTKVNF*MWAEVT Trigger: GGTCACCTCAGCCCACATCAAGAAGTTCACCTTTGT...GGGGCCACCGCAGGGACAGTCAGGACAACAACTGTCGTCTCTTTCCTCCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS CCA 90 bp | GTCAAAAGCAGGGTAGACAGCCCGGATTTCTGTCAACCAGCCATATaGCATATGACCCACGGGGTAGGTGGCTGTCAGAATGGCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VKSRVDSPDFCQPAI*HMTHGVGGCQNGHC Trigger: GCAGTGGCCATTCTGACAGCCACCTACCCCGTGGGTCATATGCCATATGGCTGGTTGACAGAAATCCGGGCTGTCTACCCTGCTTTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS TCA 90 bp | TGGGCGCCAGCACAAAGGTTTTCTTCAGTGTCATCAGCCATCCAGTaGGATGAGCTCTCACAGTCACTGGCACTGGGAAGAAGGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WAPAQRFSSVSSAIQ*DELSQSLALGRRRR Trigger: TCTTCTCCTTCTTCCCAGTGCCAGTGACTGTGAGAGCTCATCTCACTGGATGGCTGATGACACTGAAGAAAACCTTTGTGCTGGCGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CAA 90 bp | CCTTTGGTTCCAAAGTGGAGATTGTCCAAGGGAGTAGAAACGTTGACCAAGAGGAAGTCGATGGCTATGTaGGTGATGCCGAGGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PLVPKWRLSKGVETLTKRKSMAM*VMPRGT Trigger: GGTGCCCCTCGGCATCACCAACATAGCCATCGACTT...CCTCTTGGTCAACGTTTCTACTCCCTTGGACAATCTCCACTTTGGAACCAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CAA 90 bp | GTCCCTGCATCGGTGAGCATACCCAGTATGCTAGAGAATTTATACGAAACCTCTATGCAGAGGACGGCTTaGGCCCTGTCTCTCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPASVSIPSMLENLYETSMQRTA*ALSLLL Trigger: CAGCAAGAGAGACAGGGCCAAAGCCGTCCTCTGCAT...AGAGGTTTCGTATAAATTCTCTAGCATACTGGGTATGCTCACCGATGCAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CAA 90 bp | AAGACTTTCAGTTATCTTTCAGATCTGCCCCTGACGTCACCCACAAGCAGCTACGCTGAGGTGACCGTGTaGCTTGTGTTCGCCAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KTFSYLSDLPLTSPTSSYAEVTV*LVFASL Trigger: TAAACTGGCGAACACAAGCAACACGGTCACCTCAGC...GTAGCTGCTTGTGGGTGACGTCAGGGGCAGATCTGAAAGATAACTGAAAGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CAA 90 bp | ACAATTAAGACTTTCAGTTATCTTTCAGATCTGCCCCTGACGTCACCCACAAGCCGGGACACGAAGAGGTaGACAATGGGCCGACTGATT | + |
|
Preference number: 5 (lower is better) Translates to: TIKTFSYLSDLPLTSPTSRDTKR*TMGRLI Trigger: AATCAGTCGGCCCATTGTCAACCTCTTCGTGTCCCG...GCTTGTGGGTGACGTCAGGGGCAGATCTGAAAGATAACTGAAAGTCTTAATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS TCA 90 bp | CATCCCACCAGGAAACTGTATTTGTGTTTTAAGAGAATGCCAGCATaGGTCCACGCCATGGCATCCATAAAAGGGAAGGCAGCGAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: HPTRKLYLCFKRMPA*VHAMASIKGKAARY Trigger: GTATCTCGCTGCCTTCCCTTTTATGGATGCCATGGCGTGGACTCATGCTGGCATTCTCTTAAAACACAAATACAGTTTCCTGGTGGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CAA 90 bp | GAGATTGTCCAAGGGAGTAGAAACGTTGACCAAGAGGCAGCTCTATCTTTTGGGGTGTTCGCCAGTTTATaGCTGGGGTTATTCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EIVQGSRNVDQEAALSFGVFASL*LGLFLS Trigger: TGACAAGAATAACCCCAGCAATAAACTGGCGAACAC...CCCAAAAGATAGAGCTGCCTCTTGGTCAACGTTTCTACTCCCTTGGACAATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
||
| CDS-3UTR CAA 90 bp | TCGGTGAGCATACCCAGTATGCTAGAGAATTTATACGAAACCTCTAAATCAAGGACCAGGAAACTGTATTaGTGTTTTAAGAGAATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVSIPSMLENLYETSKSRTRKLY*CFKRMP Trigger: TGGCATTCTCTTAAAACACAAATACAGTTTCCTGGT...CCTTGATTTAGAGGTTTCGTATAAATTCTCTAGCATACTGGGTATGCTCACCGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 72 bp | CCTGCTAGAAGGGAGCCCACACCTAGTGTGGCTCCGTaGACCCCCAGGTACGGCAGGACCACAAGGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: PARREPTPSVAP*TPRYGRTTRLV Trigger: CACCAGCCTTGTGGTCCTGCCGTACCTGGGGGTGCACGGAGCCACACTAGGTGTGGGCTCCCTTCTAGCAGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 72 bp | GCAGAGCTGCCACCAAGGTCCCGGGACACGAAGAGGTaGACAATGGGCCGACTGATTCGCTGCGTGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AELPPRSRDTKR*TMGRLIRCVAR Trigger: CCTGGCCACGCAGCGAATCAGTCGGCCCATTGTCAACCTCTTCGTGTCCCGGGACCTTGGTGGCAGCTCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS TCA 72 bp | GCCCGTAGCTGGCCAGCATTTCTACTGCATCCTCCTTaGCTGCAGCGATGCCCCGGTTCAAGGCCTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: ARSWPAFLLHPP*LQRCPGSRPAP Trigger: GGGAGCAGGCCTTGAACCGGGGCATCGCTGCAGTCAAGGAGGATGCAGTAGAAATGCTGGCCAGCTACGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 72 bp | TGTGGAAGACGGCAGCGATGGCACCGGCCACCACCATaGAGAGGACGGCTTTGGCCCTGTCTCTCTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: CGRRQRWHRPPP*RGRLWPCLSCC Trigger: ACAGCAAGAGAGACAGGGCCAAAGCCGTCCTCTGCATGGTGGTGGCCGGTGCCATCGCTGCCGTCTTCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 72 bp | ATGACCCACGGGGTAGGTGGCTGTCAGAATGGCCACTaGCTCTGTAGCAGCAGAGCTGCCACCAAGGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: MTHGVGGCQNGH*LCSSRAATKVP Trigger: CGGGACCTTGGTGGCAGCTCTGCTGCTACAGAGGCAGTGGCCATTCTGACAGCCACCTACCCCGTGGGTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CCA 72 bp | CGATGGCACCGGCCACCACCATGCAGAGGACGGCTTTaGCCCTGTCTCTCTTGCTGTTCACGAACACCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RWHRPPPCRGRL*PCLSCCSRTPG Trigger: GCCTGGTGTTCGTGAACAGCAAGAGAGACAGGGCCAAAGCCGTCCTCTGCATGGTGGTGGCCGGTGCCATCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CCA 72 bp | CACTGTAGGCTATCAGGGTGTGGAAGACGGCAGCGATaGCACCGGCCACCACCATGCAGAGGACGGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: HCRLSGCGRRQR*HRPPPCRGRLW Trigger: CCAAAGCCGTCCTCTGCATGGTGGTGGCCGGTGCCATCGCTGCCGTCTTCCACACCCTGATAGCCTACAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 72 bp | CGGTTCAAGGCCTGCTCCCCGAAGTCGATGGCTATGTaGGTGATGCCGAGGGGCACCAGGAACCGGATCAGG | + |
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Preference number: 6 (lower is better) Translates to: RFKACSPKSMAM*VMPRGTRNRIR Trigger: CCTGATCCGGTTCCTGGTGCCCCTCGGCATCACCAACATAGCCATCGACTTCGGGGAGCAGGCCTTGAACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 72 bp | GCGATGGCACCGGCCACCACCATGCAGAGGACGGCTTaGGCCCTGTCTCTCTTGCTGTTCACGAACACCAGG | + |
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Preference number: 6 (lower is better) Translates to: AMAPATTMQRTA*ALSLLLFTNTR Trigger: CCTGGTGTTCGTGAACAGCAAGAGAGACAGGGCCAAAGCCGTCCTCTGCATGGTGGTGGCCGGTGCCATCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 90 bp | TCTGTAGCAGCAGAGCTGCCACCAAGGTCCCGGGACACGAAGAGGTaGACAATGGGCCGACTGATTCGCTGCGTGGCCAGGATCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: SVAAELPPRSRDTKR*TMGRLIRCVARIRA Trigger: GGCTCTGATCCTGGCCACGCAGCGAATCAGTCGGCCCATTGTCAACCTCTTCGTGTCCCGGGACCTTGGTGGCAGCTCTGCTGCTACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 72 bp | GACACGAAGAGGTTGACAATGGGCCGACTGATTCGCTaGGTGGCCAGGATCAGAGCCAGGGGCCACCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: DTKRLTMGRLIR*VARIRARGHQK Trigger: CTTCTGGTGGCCCCTGGCTCTGATCCTGGCCACGCAGCGAATCAGTCGGCCCATTGTCAACCTCTTCGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 90 bp | AAGACGGCAGCGATGGCACCGGCCACCACCATGCAGAGGACGGCTTaGGCCCTGTCTCTCTTGCTGTTCACGAACACCAGGCCCACATTT | + |
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Preference number: 6 (lower is better) Translates to: KTAAMAPATTMQRTA*ALSLLLFTNTRPTF Trigger: AAATGTGGGCCTGGTGTTCGTGAACAGCAAGAGAGACAGGGCCAAAGCCGTCCTCTGCATGGTGGTGGCCGGTGCCATCGCTGCCGTCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 72 bp | GTAGCTGGCCAGCATTTCTACTGCATCCTCCTTGACTaGAGCGATGCCCCGGTTCAAGGCCTGCTCCCCGAA | + |
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Preference number: 6 (lower is better) Translates to: VAGQHFYCILLD*SDAPVQGLLPE Trigger: TTCGGGGAGCAGGCCTTGAACCGGGGCATCGCTGCAGTCAAGGAGGATGCAGTAGAAATGCTGGCCAGCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 72 bp | CGTGGATGTTCCTGTAGTAGCCCAGGCACAGTGTGGTaGAGCGCACAAGCGCACCCATGTACAGAGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: RGCSCSSPGTVW*SAQAHPCTETG Trigger: TCCTGTCTCTGTACATGGGTGCGCTTGTGCGCTGCACCACACTGTGCCTGGGCTACTACAGGAACATCCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 90 bp | GCACCGGCCACCACCATGCAGAGGACGGCTTTGGCCCTGTCTCTCTaGCTGTTCACGAACACCAGGCCCACATTTTTGAAGTCACTCATG | + |
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Preference number: 6 (lower is better) Translates to: APATTMQRTALALSL*LFTNTRPTFLKSLM Trigger: CATGAGTGACTTCAAAAATGTGGGCCTGGTGTTCGTGAACAGCAAGAGAGACAGGGCCAAAGCCGTCCTCTGCATGGTGGTGGCCGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 72 bp | AGAATACGCCAGCCCGTAGCTGGCCAGCATTTCTACTaGATCCTCCTTGACTGCAGCGATGCCCCGGTTCAA | + |
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Preference number: 6 (lower is better) Translates to: RIRQPVAGQHFY*ILLDCSDAPVQ Trigger: TTGAACCGGGGCATCGCTGCAGTCAAGGAGGATGCAGTAGAAATGCTGGCCAGCTACGGGCTGGCGTATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CCA 72 bp | TGTCGTGGATGTTCCTGTAGTAGCCCAGGCACAGTGTaGTGCAGCGCACAAGCGCACCCATGTACAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: CRGCSCSSPGTV*CSAQAHPCTET Trigger: TGTCTCTGTACATGGGTGCGCTTGTGCGCTGCACCACACTGTGCCTGGGCTACTACAGGAACATCCACGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CCA 72 bp | AGGGTAGACAGCCCGGATTTCTGTCAACCAGCCATATaGCATATGACCCACGGGGTAGGTGGCTGTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RVDSPDFCQPAI*HMTHGVGGCQN Trigger: ATTCTGACAGCCACCTACCCCGTGGGTCATATGCCATATGGCTGGTTGACAGAAATCCGGGCTGTCTACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CCA 72 bp | TTCTCTCATCTCTACGATGTCTGTGACCTCCTCTGTTaGAGGCATGTCGGTCATGGCCGAGTCTTCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: FSHLYDVCDLLC*RHVGHGRVFSL Trigger: GAGGGAGAAGACTCGGCCATGACCGACATGCCTCCAACAGAGGAGGTCACAGACATCGTAGAGATGAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 90 bp | GCAAAGTCCACTCCAATGATATCTATCAGAATCTTCTCAGAGACGTaGGGGGTCCAGAACATGACAAAACAGAGCGTCAGCGACAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: AKSTPMISIRIFSET*GVQNMTKQSVSDSA Trigger: GGCGCTGTCGCTGACGCTCTGTTTTGTCATGTTCTGGACCCCCAACGTCTCTGAGAAGATTCTGATAGATATCATTGGAGTGGACTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS TCA 72 bp | CGCCATGCAGACAAAGGTGAACTTCTTGATGTGGGCTaGGGTGACCGTGTTGCTTGTGTTCGCCAGTTTATT | + |
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Preference number: 6 (lower is better) Translates to: RHADKGELLDVG*GDRVACVRQFI Trigger: AATAAACTGGCGAACACAAGCAACACGGTCACCTCAGCCCACATCAAGAAGTTCACCTTTGTCTGCATGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS TCA 72 bp | AAGGTTTTCTTCAGTGTCATCAGCCATCCAGTGAGATaGGCTCTCACAGTCACTGGCACTGGGAAGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: KVFFSVISHPVR*ALTVTGTGKKE Trigger: CTCCTTCTTCCCAGTGCCAGTGACTGTGAGAGCTCATCTCACTGGATGGCTGATGACACTGAAGAAAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS TCA 72 bp | GCACAAAGGTTTTCTTCAGTGTCATCAGCCATCCAGTaGGATGAGCTCTCACAGTCACTGGCACTGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: AQRFSSVSSAIQ*DELSQSLALGR Trigger: TCTTCCCAGTGCCAGTGACTGTGAGAGCTCATCTCACTGGATGGCTGATGACACTGAAGAAAACCTTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 72 bp | TCTCTCTTGCTGTTCACGAACACCAGGCCCACATTTTaGAAGTCACTCATGGGCCCCGTGAAGAACTTCATC | + |
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Preference number: 6 (lower is better) Translates to: SLLLFTNTRPTF*KSLMGPVKNFI Trigger: GATGAAGTTCTTCACGGGGCCCATGAGTGACTTCAAAAATGTGGGCCTGGTGTTCGTGAACAGCAAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 90 bp | TTGGCCCTGTCTCTCTTGCTGTTCACGAACACCAGGCCCACATTTTaGAAGTCACTCATGGGCCCCGTGAAGAACTTCATCAAAGAATAC | + |
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Preference number: 6 (lower is better) Translates to: LALSLLLFTNTRPTF*KSLMGPVKNFIKEY Trigger: GTATTCTTTGATGAAGTTCTTCACGGGGCCCATGAGTGACTTCAAAAATGTGGGCCTGGTGTTCGTGAACAGCAAGAGAGACAGGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 72 bp | AAGGTGAACTTCTTGATGTGGGCTGAGGTGACCGTGTaGCTTGTGTTCGCCAGTTTATTGCTGGGGTTATTC | + |
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Preference number: 6 (lower is better) Translates to: KVNFLMWAEVTV*LVFASLLLGLF Trigger: GAATAACCCCAGCAATAAACTGGCGAACACAAGCAACACGGTCACCTCAGCCCACATCAAGAAGTTCACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 90 bp | ATGCAGACAAAGGTGAACTTCTTGATGTGGGCTGAGGTGACCGTGTaGCTTGTGTTCGCCAGTTTATTGCTGGGGTTATTCTTGTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: MQTKVNFLMWAEVTV*LVFASLLLGLFLSK Trigger: TTTTGACAAGAATAACCCCAGCAATAAACTGGCGAACACAAGCAACACGGTCACCTCAGCCCACATCAAGAAGTTCACCTTTGTCTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS CAA 72 bp | ACTCCAATGATATCTATCAGAATCTTCTCAGAGACGTaGGGGGTCCAGAACATGACAAAACAGAGCGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: TPMISIRIFSET*GVQNMTKQSVS Trigger: GCTGACGCTCTGTTTTGTCATGTTCTGGACCCCCAACGTCTCTGAGAAGATTCTGATAGATATCATTGGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS TCA 72 bp | AGGAAACTGTATTTGTGTTTTAAGAGAATGCCAGCATaGGTCCACGCCATGGCATCCATAAAAGGGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RKLYLCFKRMPA*VHAMASIKGKA Trigger: TGCCTTCCCTTTTATGGATGCCATGGCGTGGACTCATGCTGGCATTCTCTTAAAACACAAATACAGTTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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| CDS GCA 72 bp | CTCCATCTTCTTTTTCTGTTTTCGATAGACATAGCATaGTGCAAGGGCAACCATGGTAGATTCTCCCACAAA | + |
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Preference number: 6 (lower is better) Translates to: LHLLFLFSIDIA*CKGNHGRFSHK Trigger: TTTGTGGGAGAATCTACCATGGTTGCCCTTGCAGCATGCTATGTCTATCGAAAACAGAAAAAGAAGATGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022875.7 |
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