Pregenerated sensors for ANGPTL7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028989Ensembl transcript IDs: ENSMUST00000030840.4
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTATTGTGTGTGTGTGCTCACACAGGTAAAGTTATATTGTGCTCCTaGATGATAAACTGTTCCCTCCTACCCTGTGTCCACCTCCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: LLCVCAHTGKVILCS*MINCSLLPCVHLLL Trigger: GAGGAGGAGGTGGACACAGGGTAGGAGGGAACAGTTTATCATCCAGGAGCACAATATAACTTTACCTGTGTGAGCACACACACACAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGCACCTCCTCCTCCCATaGTGTTCTCCCTCCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: RVCAHLRLVFSPRQTRSMHLLLP*CSPSSV Trigger: CACTGAGGAGGGAGAACAGCATGGGAGGAGGAGGTG...CATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGTCGCGGGGTAAGACTTaGAAGCCCCTTCTCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: RVCAHLRLVFSPRQTRSMSRGKT*KPLLHH Trigger: GTGGTGGAGAAGGGGCTTCCAAGTCTTACCCCGCGA...CATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR-3UTR CCA 90 bp | TGGGTCCGCCTGGCTCCATCTGCTAGTGTGCACTGTTGGCACGTGTGGTTCTATGTTATATTGTGCTCCTaGATGATAAACTGTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: WVRLAPSASVHCWHVWFYVILCS*MINCSL Trigger: GAGGGAACAGTTTATCATCCAGGAGCACAATATAAC...ATAGAACCACACGTGCCAACAGTGCACACTAGCAGATGGAGCCAGGCGGACCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR CCA 72 bp | ATGAGTTCTCCCGTGAGGCACCGTGGCAGGCCCCACTaGGTCCGCCTGGCTCCATCTGCTAGTGTGCACTGT | + |
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Preference number: 3 (lower is better) Translates to: MSSPVRHRGRPH*VRLAPSASVHC Trigger: ACAGTGCACACTAGCAGATGGAGCCAGGCGGACCCAGTGGGGCCTGCCACGGTGCCTCACGGGAGAACTCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR-3UTR CAA 90 bp | AGAGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGGCACGTGTGGTTCTATaGTGTGTGTGTGCTCACACA | + |
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Preference number: 3 (lower is better) Translates to: RVCAHLRLVFSPRQTRSMARVVL*CVCAHT Trigger: TGTGTGAGCACACACACACAATAGAACCACACGTGC...CATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR CCA 72 bp | TATTGTGATCACCCAGAGTCTGTGCTCACCTCCGGCTaGTGTTCTCGCCACGTCAGACCCGCAGCATGTTGT | + |
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Preference number: 3 (lower is better) Translates to: YCDHPESVLTSG*CSRHVRPAACC Trigger: ACAACATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCTGGGTGATCACAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR CCA 72 bp | TGGGTCCGCCTGGCTCCATCTGCTAGTGTGCACTGTTaGCACGTGTGGTTCTATTGTGTGTGTGTGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: WVRLAPSASVHC*HVWFYCVCVLT Trigger: TGTGAGCACACACACACAATAGAACCACACGTGCCAACAGTGCACACTAGCAGATGGAGCCAGGCGGACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR GCA 72 bp | ATGTTTGAAGGCAGTATTGTGATCACCCAGAGTCTGTaGTCACCTCCGGCTGGTGTTCTCGCCACGTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: MFEGSIVITQSL*SPPAGVLATSD Trigger: GTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCTGGGTGATCACAATACTGCCTTCAAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR CCA 72 bp | CTGGCTCCATCTGCTAGTGTGCACTGTTGGCACGTGTaGTTCTATTGTGTGTGTGTGCTCACACAGGTAAAG | + |
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Preference number: 3 (lower is better) Translates to: LAPSASVHCWHV*FYCVCVLTQVK Trigger: CTTTACCTGTGTGAGCACACACACACAATAGAACCACACGTGCCAACAGTGCACACTAGCAGATGGAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR CCA 72 bp | GTGTGTGCTCACACAGGTAAAGTTATATTGTGCTCCTaGATGATAAACTGTTCCCTCCTACCCTGTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: VCAHTGKVILCS*MINCSLLPCVH Trigger: GTGGACACAGGGTAGGAGGGAACAGTTTATCATCCAGGAGCACAATATAACTTTACCTGTGTGAGCACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR TCA 72 bp | CCACCTGCTTTCTTTCATTTCTCACAGCCTCTCCGCTaGGAATCACACCAGGTTTTTATTTGTTCTTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: PPAFFHFSQPLR*ESHQVFICSFP Trigger: GGGAAAAGAACAAATAAAAACCTGGTGTGATTCTCAGCGGAGAGGCTGTGAGAAATGAAAGAAAGCAGGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR GCA 90 bp | AGGCCCCACTGGGTCCGCCTGGCTCCATCTGCTAGTGTGCACTGTTGGCACGTGGTCTGCGTGACGGTCTaGGCAGCCTGCAGCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: RPHWVRLAPSASVHCWHVVCVTV*AACSCM Trigger: CATGCAGCTGCAGGCTGCGCAGACCGTCACGCAGAC...CACGTGCCAACAGTGCACACTAGCAGATGGAGCCAGGCGGACCCAGTGGGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR TCA 90 bp | AGGCCCCACTGGGTCCGCCTGGCTCCATCTGCTAGTGTGCACTGTTGGCACGTGTGGCCACCTGGGCTTTaGGCTCCCTCATCTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: RPHWVRLAPSASVHCWHVWPPGL*APSSPH Trigger: GTGAGGAGATGAGGGAGCTCAAAGCCCAGGTGGCCA...CACGTGCCAACAGTGCACACTAGCAGATGGAGCCAGGCGGACCCAGTGGGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR TCA 90 bp | AGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGTTCTCCCAGCAGACTGCTaGGGTTGGCCACCTGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SLCSPPAGVLATSDPQHVLPADC*GWPPGL Trigger: AAGCCCAGGTGGCCAACCTCAGCAGTCTGCTGGGAG...AACATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR GCA 90 bp | AGAGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGACCCAGTCGCTCTCCTaGTTCCTGCTCAGCTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RVCAHLRLVFSPRQTRSMTQSLS*FLLSSP Trigger: GGGAGAGCTGAGCAGGAAGCAGGAGAGCGACTGGGT...CATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR GCA 90 bp | AGGCCCCACTGGGTCCGCCTGGCTCCATCTGCTAGTGTGCACTGTTGGCACGTGCGTCCTTCCCCACGTTaGCACTGTAGTTCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RPHWVRLAPSASVHCWHVRPSPR*HCSSPG Trigger: TCCTGGGGAACTACAGTGGCAACGTGGGGAAGGACG...CACGTGCCAACAGTGCACACTAGCAGATGGAGCCAGGCGGACCCAGTGGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CCA 90 bp | AGGCCCCACTGGGTCCGCCTGGCTCCATCTGCTAGTGTGCACTGTTGGCACGTGCTGAGGTTGGCCACCTaGGCTTTGAGCTCCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: RPHWVRLAPSASVHCWHVLRLAT*ALSSLI Trigger: GATGAGGGAGCTCAAAGCCCAGGTGGCCAACCTCAG...CACGTGCCAACAGTGCACACTAGCAGATGGAGCCAGGCGGACCCAGTGGGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR CAA 72 bp | CGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGTaGTCCAGTGCTCCTCTCTCCCCCAGGACTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: RLVFSPRQTRSM*SSAPLSPRTLT Trigger: TGTCAGAGTCCTGGGGGAGAGAGGAGCACTGGACAACATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR TCA 90 bp | AGAGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGGGTAGTACACCCCATTaGGGTTGGAGTCTGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RVCAHLRLVFSPRQTRSMGSTPH*GWSLCS Trigger: GCTGCACAGACTCCAACCTCAATGGGGTGTACTACC...CATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR GCA 90 bp | AGAGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGGAGACTCCATGTGCTTaGTGCTGCTCTCCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RVCAHLRLVFSPRQTRSMETPCA*CCSPAP Trigger: TGGAGCTGGAGAGCAGCAGCAAGCACATGGAGTCTC...CATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR TCA 90 bp | AGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGTTTCTTACGTCTCTGGATaGTGGTCCAGCCTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SLCSPPAGVLATSDPQHVSYVSG*WSSLLL Trigger: CAGGAGGAGGCTGGACCATCATCCAGAGACGTAAGA...AACATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR GCA 90 bp | AGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGTTCCATGTGCTTGCTGCTaGTCTCCAGCTCCATCACCT | + |
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Preference number: 4 (lower is better) Translates to: SLCSPPAGVLATSDPQHVPCACC*SPAPSP Trigger: AGGTGATGGAGCTGGAGAGCAGCAGCAAGCACATGG...AACATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR TCA 90 bp | AGAGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGCAGCCTGCAGCTGCATaGTGTCAATCTGGTTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RVCAHLRLVFSPRQTRSMQPAAA*CQSGCS Trigger: TGAACAACCAGATTGACATCATGCAGCTGCAGGCTG...CATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR GCA 90 bp | AGAGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGACCTTTTCGGAGCTGTaGGCACTTGTCCAAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: RVCAHLRLVFSPRQTRSMTFSEL*ALVQAV Trigger: AACTGCTTGGACAAGTGCGCACAGCTCCGAAAAGGT...CATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CCA 90 bp | AGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGTTCCACTCTTACGTCTCTaGATGATGGTCCAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLCSPPAGVLATSDPQHVPLLRL*MMVQPP Trigger: AGGAGGCTGGACCATCATCCAGAGACGTAAGAGTGG...AACATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR GCA 90 bp | TGGGTCCGCCTGGCTCCATCTGCTAGTGTGCACTGTTGGCACGTGTGGTTCTATACGGTCTGCGCAGCCTaGAGCTGCATGATGTCAATC | + |
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Preference number: 4 (lower is better) Translates to: WVRLAPSASVHCWHVWFYTVCAA*SCMMSI Trigger: GATTGACATCATGCAGCTGCAGGCTGCGCAGACCGT...ATAGAACCACACGTGCCAACAGTGCACACTAGCAGATGGAGCCAGGCGGACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR GCA 90 bp | TGGGTCCGCCTGGCTCCATCTGCTAGTGTGCACTGTTGGCACGTGTGGTTCTATATACTCTGCGTAGCGTaGATTGCCCTCCCAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: WVRLAPSASVHCWHVWFYILCVA*IALPVL Trigger: GAGGACTGGGAGGGCAATGCACGCTACGCAGAGTAT...ATAGAACCACACGTGCCAACAGTGCACACTAGCAGATGGAGCCAGGCGGACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR TCA 90 bp | TGGGTCCGCCTGGCTCCATCTGCTAGTGTGCACTGTTGGCACGTGTGGTTCTATTGTGTCTTGCGTTTATaGGGCTTCTGCAGCCACACT | + |
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Preference number: 4 (lower is better) Translates to: WVRLAPSASVHCWHVWFYCVLRL*GFCSHT Trigger: AGTGTGGCTGCAGAAGCCTCATAAACGCAAGACACA...ATAGAACCACACGTGCCAACAGTGCACACTAGCAGATGGAGCCAGGCGGACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR GCA 90 bp | CCATCTGCTAGTGTGCACTGTTGGCACGTGTGGTTCTATTGTGTGTGTGTGCTCAGCCGAGACTCCATGTaGTTGCTGCTGCTCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PSASVHCWHVWFYCVCVLSRDSM*LLLLSS Trigger: GCTGGAGAGCAGCAGCAAGCACATGGAGTCTCGGCT...GAGCACACACACACAATAGAACCACACGTGCCAACAGTGCACACTAGCAGATGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CCA 90 bp | CATCTGCTAGTGTGCACTGTTGGCACGTGTGGTTCTATTGTGTGTGTGTGCTCATGCAGCCACACTGGGTaGCTGACAAAGGCTACAAGG | + |
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Preference number: 4 (lower is better) Translates to: HLLVCTVGTCGSIVCVCSCSHTG*LTKATR Trigger: CCTTGTAGCCTTTGTCAGCCACCCAGTGTGGCTGCA...TGAGCACACACACACAATAGAACCACACGTGCCAACAGTGCACACTAGCAGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR GCA 90 bp | CATCTGCTAGTGTGCACTGTTGGCACGTGTGGTTCTATTGTGTGTGTGTGCTCATGCGCAGCCTGCAGCTaGATGATGTCAATCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: HLLVCTVGTCGSIVCVCSCAACS*MMSIWL Trigger: CAACCAGATTGACATCATGCAGCTGCAGGCTGCGCA...TGAGCACACACACACAATAGAACCACACGTGCCAACAGTGCACACTAGCAGATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR GCA 90 bp | GAATCACACCAGGTTTTTATTTGTTCTTTTCCCTCGTGTCATCTAAGCCTCAGTCGCTCTCCTGCTTCCTaGTCAGCTCTCCCAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: ESHQVFICSFPSCHLSLSRSPAS*SALPAD Trigger: GTCTGCTGGGAGAGCTGAGCAGGAAGCAGGAGAGCG...ACTGAGGCTTAGATGACACGAGGGAAAAGAACAAATAAAAACCTGGTGTGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR TCA 90 bp | GAATCACACCAGGTTTTTATTTGTTCTTTTCCCTCGTGTCATCTAAGCCTCAGTGCCAGCCATACCAGCTaGTGCCATCCATGTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: ESHQVFICSFPSCHLSLSASHTS*CHPCAF Trigger: GAAAGCACATGGATGGCATCAGCTGGTATGGCTGGC...ACTGAGGCTTAGATGACACGAGGGAAAAGAACAAATAAAAACCTGGTGTGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CCA 90 bp | GAATCACACCAGGTTTTTATTTGTTCTTTTCCCTCGTGTCATCTAAGCCTCAGTCTTCTGCAGCCACACTaGGTGGCTGACAAAGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: ESHQVFICSFPSCHLSLSLLQPH*VADKGY Trigger: GTAGCCTTTGTCAGCCACCCAGTGTGGCTGCAGAAG...ACTGAGGCTTAGATGACACGAGGGAAAAGAACAAATAAAAACCTGGTGTGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| 3UTR CAA 72 bp | ACAGCCTCTCCGCTGAGAATCACACCAGGTTTTTATTaGTTCTTTTCCCTCGTGTCATCTAAGCCTCAGTTA | + |
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Preference number: 4 (lower is better) Translates to: TASPLRITPGFY*FFSLVSSKPQL Trigger: TAACTGAGGCTTAGATGACACGAGGGAAAAGAACAAATAAAAACCTGGTGTGATTCTCAGCGGAGAGGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 90 bp | TCCAGCTCCATCACCTGCATGACCACACTGACCCAGTCGCTCTCCTaGTTCCTGCTCAGCTCTCCCAGCAGACTGCTGAGGTTGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: SSSITCMTTLTQSLS*FLLSSPSRLLRLAT Trigger: GGTGGCCAACCTCAGCAGTCTGCTGGGAGAGCTGAGCAGGAAGCAGGAGAGCGACTGGGTCAGTGTGGTCATGCAGGTGATGGAGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CCA 90 bp | TCCTCCAGCTCCACACGAAGCCGGCTTGGCTGCCTGGTGAGCCGGTaGATATGTTCATTCCCCAGCCAGAAGTCACCTCGGATGCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: SSSSTRSRLGCLVSR*ICSFPSQKSPRMLP Trigger: TGGCAGCATCCGAGGTGACTTCTGGCTGGGGAATGAACATATCCACCGGCTCACCAGGCAGCCAAGCCGGCTTCGTGTGGAGCTGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 90 bp | AGCCGAGACTCCATGTGCTTGCTGCTGCTCTCCAGCTCCATCACCTaGATGACCACACTGACCCAGTCGCTCTCCTGCTTCCTGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SRDSMCLLLLSSSIT*MTTLTQSLSCFLLS Trigger: GCTGAGCAGGAAGCAGGAGAGCGACTGGGTCAGTGTGGTCATGCAGGTGATGGAGCTGGAGAGCAGCAGCAAGCACATGGAGTCTCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CAA 90 bp | AGGCCCCACTGGGTCCGCCTGGCTCCATCTGCTAGTGTGCACTGTTGGCACGTGTCGTCAGGAGGAAGCTaGTACACTCCAGAGATTCGG | + |
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Preference number: 5 (lower is better) Translates to: RPHWVRLAPSASVHCWHVSSGGS*YTPEIR Trigger: CCGAATCTCTGGAGTGTACAAGCTTCCTCCTGACGA...CACGTGCCAACAGTGCACACTAGCAGATGGAGCCAGGCGGACCCAGTGGGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 90 bp | GGCCACCTGGGCTTTGAGCTCCCTCATCTCCTCACAGCAGCCCGCTaGTTTGAGCTGTGTCTTGCGTTTATGAGGCTTCTGCAGCCACAC | + |
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Preference number: 5 (lower is better) Translates to: GHLGFELPHLLTAAR*FELCLAFMRLLQPH Trigger: GTGTGGCTGCAGAAGCCTCATAAACGCAAGACACAGCTCAAAGCAGCGGGCTGCTGTGAGGAGATGAGGGAGCTCAAAGCCCAGGTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 90 bp | GTTCATTGCCCAACGCAAAGTAGCTATACTCTGCGTAGCGTGCATTaGCCTCCCAGTCCTCCAGCTCCACACGAAGCCGGCTTGGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: VHCPTQSSYTLRSVH*PPSPPAPHEAGLAA Trigger: GGCAGCCAAGCCGGCTTCGTGTGGAGCTGGAGGACTGGGAGGGCAATGCACGCTACGCAGAGTATAGCTACTTTGCGTTGGGCAATGAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CAA 90 bp | AGAGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGATACTGTCTCCAGTCTaGGTAGAAGGAGACAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: RVCAHLRLVFSPRQTRSMILSPV*VEGDKA Trigger: GGCCTTGTCTCCTTCTACCAAGACTGGAGACAGTAT...CATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CAA 90 bp | AGAGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGGATGCTGCCAAACCCTaGCTTATACTGTCTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: RVCAHLRLVFSPRQTRSMDAAKP*LILSPV Trigger: GACTGGAGACAGTATAAGCAAGGGTTTGGCAGCATC...CATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CAA 90 bp | AGTCTGTGCTCACCTCCGGCTGGTGTTCTCGCCACGTCAGACCCGCAGCATGTTTCGTTGTCCTTGTCCTaGGTGCTGAAGACGGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: SLCSPPAGVLATSDPQHVSLSLS*VLKTVL Trigger: CAACACCGTCTTCAGCACCAAGGACAAGGACAACGA...AACATGCTGCGGGTCTGACGTGGCGAGAACACCAGCCGGAGGTGAGCACAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 90 bp | GTTCAGTTCATTGCCCAACGCAAAGTAGCTATACTCTGCGTAGCGTaGATTGCCCTCCCAGTCCTCCAGCTCCACACGAAGCCGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: VQFIAQRKVAILCVA*IALPVLQLHTKPAW Trigger: CCAAGCCGGCTTCGTGTGGAGCTGGAGGACTGGGAGGGCAATGCACGCTACGCAGAGTATAGCTACTTTGCGTTGGGCAATGAACTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CCA 90 bp | GTCTGCGTGACGGTCTGCGCAGCCTGCAGCTGCATGATGTCAATCTaGTTGTTCATCTCAGAGTACTTGCTCTCGGCAGTGCTGAGCCGA | + |
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Preference number: 5 (lower is better) Translates to: VCVTVCAACSCMMSI*LFISEYLLSAVLSR Trigger: TCGGCTCAGCACTGCCGAGAGCAAGTACTCTGAGATGAACAACCAGATTGACATCATGCAGCTGCAGGCTGCGCAGACCGTCACGCAGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS TCA 90 bp | GTGCGCACTTGTCCAAGCAGTTGTCGTTGTCCTTGTCCTTGGTGCTaGAGACGGTGTTGTTATGGTAGAGGAGGGCGTCCTTCCCCACGT | + |
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Preference number: 5 (lower is better) Translates to: VRTCPSSCRCPCPWC*RRCCYGRGGRPSPR Trigger: ACGTGGGGAAGGACGCCCTCCTCTACCATAACAACACCGTCTTCAGCACCAAGGACAAGGACAACGACAACTGCTTGGACAAGTGCGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 90 bp | ATGGCATCTGCCGAGGTCTGCGTGACGGTCTGCGCAGCCTGCAGCTaGATGATGTCAATCTGGTTGTTCATCTCAGAGTACTTGCTCTCG | + |
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Preference number: 5 (lower is better) Translates to: MASAEVCVTVCAACS*MMSIWLFISEYLLS Trigger: CGAGAGCAAGTACTCTGAGATGAACAACCAGATTGACATCATGCAGCTGCAGGCTGCGCAGACCGTCACGCAGACCTCGGCAGATGCCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 90 bp | GCGGTAGCTGTTCAGTTCATTGCCCAACGCAAAGTAGCTATACTCTaGGTAGCGTGCATTGCCCTCCCAGTCCTCCAGCTCCACACGAAG | + |
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Preference number: 5 (lower is better) Translates to: AVAVQFIAQRKVAIL*VACIALPVLQLHTK Trigger: CTTCGTGTGGAGCTGGAGGACTGGGAGGGCAATGCACGCTACGCAGAGTATAGCTACTTTGCGTTGGGCAATGAACTGAACAGCTACCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS TCA 90 bp | CATCCATGTGCTTTCGGTGCTCGCCAAGGCGGTAGTACACCCCATTaGGGTTGGAGTCTGTGCAGCAGTTGTACCAGTAGCCACCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: HPCAFGARQGGSTPH*GWSLCSSCTSSHLF Trigger: GAAAAGGTGGCTACTGGTACAACTGCTGCACAGACTCCAACCTCAATGGGGTGTACTACCGCCTTGGCGAGCACCGAAAGCACATGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 90 bp | GGAGTCTGTGCAGCAGTTGTACCAGTAGCCACCTTTTCGGAGCTGTaGGCACTTGTCCAAGCAGTTGTCGTTGTCCTTGTCCTTGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: GVCAAVVPVATFSEL*ALVQAVVVVLVLGA Trigger: AGCACCAAGGACAAGGACAACGACAACTGCTTGGACAAGTGCGCACAGCTCCGAAAAGGTGGCTACTGGTACAACTGCTGCACAGACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS TCA 90 bp | TGTCAATCTGGTTGTTCATCTCAGAGTACTTGCTCTCGGCAGTGCTaGGCCGAGACTCCATGTGCTTGCTGCTGCTCTCCAGCTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: CQSGCSSQSTCSRQC*AETPCACCCSPAPS Trigger: TGATGGAGCTGGAGAGCAGCAGCAAGCACATGGAGTCTCGGCTCAGCACTGCCGAGAGCAAGTACTCTGAGATGAACAACCAGATTGACA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 90 bp | TGCCACTGTAGTTCCCCAGGAAGAGGCGGTAGCTGTTCAGTTCATTaGCCAACGCAAAGTAGCTATACTCTGCGTAGCGTGCATTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: CHCSSPGRGGSCSVH*PTQSSYTLRSVHCP Trigger: AGGGCAATGCACGCTACGCAGAGTATAGCTACTTTGCGTTGGGCAATGAACTGAACAGCTACCGCCTCTTCCTGGGGAACTACAGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CAA 90 bp | CCATCTGCTAGTGTGCACTGTTGGCACGTGTGGTTCTATTGTGTGTGTGTGCTCCAGCAGCCCGCTGCTTaGAGCTGTGTCTTGCGTTTA | + |
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Preference number: 5 (lower is better) Translates to: PSASVHCWHVWFYCVCVLQQPAA*SCVLRL Trigger: TAAACGCAAGACACAGCTCAAAGCAGCGGGCTGCTG...GAGCACACACACACAATAGAACCACACGTGCCAACAGTGCACACTAGCAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CAA 90 bp | CATCTGCTAGTGTGCACTGTTGGCACGTGTGGTTCTATTGTGTGTGTGTGCTCATCCAAGCAGTTGTCGTaGTCCTTGTCCTTGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: HLLVCTVGTCGSIVCVCSSKQLS*SLSLVL Trigger: CAGCACCAAGGACAAGGACAACGACAACTGCTTGGA...TGAGCACACACACACAATAGAACCACACGTGCCAACAGTGCACACTAGCAGATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CAA 90 bp | GAATCACACCAGGTTTTTATTTGTTCTTTTCCCTCGTGTCATCTAAGCCTCAGTCGAGACTCCATGTGCTaGCTGCTGCTCTCCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: ESHQVFICSFPSCHLSLSRDSMC*LLLSSS Trigger: GGAGCTGGAGAGCAGCAGCAAGCACATGGAGTCTCG...ACTGAGGCTTAGATGACACGAGGGAAAAGAACAAATAAAAACCTGGTGTGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS-3UTR CAA 90 bp | GAATCACACCAGGTTTTTATTTGTTCTTTTCCCTCGTGTCATCTAAGCCTCAGTATGATGTCAATCTGGTaGTTCATCTCAGAGTACTTG | + |
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Preference number: 5 (lower is better) Translates to: ESHQVFICSFPSCHLSLSMMSIW*FISEYL Trigger: CAAGTACTCTGAGATGAACAACCAGATTGACATCAT...ACTGAGGCTTAGATGACACGAGGGAAAAGAACAAATAAAAACCTGGTGTGATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CCA 72 bp | TCCACACGAAGCCGGCTTGGCTGCCTGGTGAGCCGGTaGATATGTTCATTCCCCAGCCAGAAGTCACCTCGG | + |
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Preference number: 6 (lower is better) Translates to: STRSRLGCLVSR*ICSFPSQKSPR Trigger: CCGAGGTGACTTCTGGCTGGGGAATGAACATATCCACCGGCTCACCAGGCAGCCAAGCCGGCTTCGTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CAA 90 bp | TCAGAGTACTTGCTCTCGGCAGTGCTGAGCCGAGACTCCATGTGCTaGCTGCTGCTCTCCAGCTCCATCACCTGCATGACCACACTGACC | + |
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Preference number: 6 (lower is better) Translates to: SEYLLSAVLSRDSMC*LLLSSSITCMTTLT Trigger: GGTCAGTGTGGTCATGCAGGTGATGGAGCTGGAGAGCAGCAGCAAGCACATGGAGTCTCGGCTCAGCACTGCCGAGAGCAAGTACTCTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 72 bp | CTTCTGGTACAGGGAAGAACAGTCATAGATGGCATCTaGCGAGGTCTGCGTGACGGTCTGCGCAGCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLVQGRTVIDGI*RGLRDGLRSLQ Trigger: CTGCAGGCTGCGCAGACCGTCACGCAGACCTCGGCAGATGCCATCTATGACTGTTCTTCCCTGTACCAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CAA 90 bp | TGCGTGACGGTCTGCGCAGCCTGCAGCTGCATGATGTCAATCTGGTaGTTCATCTCAGAGTACTTGCTCTCGGCAGTGCTGAGCCGAGAC | + |
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Preference number: 6 (lower is better) Translates to: CVTVCAACSCMMSIW*FISEYLLSAVLSRD Trigger: GTCTCGGCTCAGCACTGCCGAGAGCAAGTACTCTGAGATGAACAACCAGATTGACATCATGCAGCTGCAGGCTGCGCAGACCGTCACGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS TCA 72 bp | GCTTTCGGTGCTCGCCAAGGCGGTAGTACACCCCATTaGGGTTGGAGTCTGTGCAGCAGTTGTACCAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: AFGARQGGSTPH*GWSLCSSCTSS Trigger: GCTACTGGTACAACTGCTGCACAGACTCCAACCTCAATGGGGTGTACTACCGCCTTGGCGAGCACCGAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 72 bp | GCATCTGCCGAGGTCTGCGTGACGGTCTGCGCAGCCTaGAGCTGCATGATGTCAATCTGGTTGTTCATCTCA | + |
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Preference number: 6 (lower is better) Translates to: ASAEVCVTVCAA*SCMMSIWLFIS Trigger: TGAGATGAACAACCAGATTGACATCATGCAGCTGCAGGCTGCGCAGACCGTCACGCAGACCTCGGCAGATGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 72 bp | TGTTGTTATGGTAGAGGAGGGCGTCCTTCCCCACGTTaGCACTGTAGTTCCCCAGGAAGAGGCGGTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: CCYGRGGRPSPR*HCSSPGRGGSC Trigger: ACAGCTACCGCCTCTTCCTGGGGAACTACAGTGGCAACGTGGGGAAGGACGCCCTCCTCTACCATAACAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS TCA 72 bp | GGTTGTTCATCTCAGAGTACTTGCTCTCGGCAGTGCTaGGCCGAGACTCCATGTGCTTGCTGCTGCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GCSSQSTCSRQC*AETPCACCCSP Trigger: TGGAGAGCAGCAGCAAGCACATGGAGTCTCGGCTCAGCACTGCCGAGAGCAAGTACTCTGAGATGAACAACC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 72 bp | GGCTTTGAGCTCCCTCATCTCCTCACAGCAGCCCGCTaGTTTGAGCTGTGTCTTGCGTTTATGAGGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GFELPHLLTAAR*FELCLAFMRLL Trigger: CAGAAGCCTCATAAACGCAAGACACAGCTCAAAGCAGCGGGCTGCTGTGAGGAGATGAGGGAGCTCAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CAA 72 bp | CCACCTTTTCGGAGCTGTGCGCACTTGTCCAAGCAGTaGTCGTTGTCCTTGTCCTTGGTGCTGAAGACGGTG | + |
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Preference number: 6 (lower is better) Translates to: PPFRSCAHLSKQ*SLSLSLVLKTV Trigger: CACCGTCTTCAGCACCAAGGACAAGGACAACGACAACTGCTTGGACAAGTGCGCACAGCTCCGAAAAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CAA 90 bp | GCCTGCAGCTGCATGATGTCAATCTGGTTGTTCATCTCAGAGTACTaGCTCTCGGCAGTGCTGAGCCGAGACTCCATGTGCTTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: ACSCMMSIWLFISEY*LSAVLSRDSMCLLL Trigger: CAGCAGCAAGCACATGGAGTCTCGGCTCAGCACTGCCGAGAGCAAGTACTCTGAGATGAACAACCAGATTGACATCATGCAGCTGCAGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 72 bp | GTTCAGTTCATTGCCCAACGCAAAGTAGCTATACTCTaGGTAGCGTGCATTGCCCTCCCAGTCCTCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: VQFIAQRKVAIL*VACIALPVLQL Trigger: GAGCTGGAGGACTGGGAGGGCAATGCACGCTACGCAGAGTATAGCTACTTTGCGTTGGGCAATGAACTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 72 bp | GCAGCAGTTGTACCAGTAGCCACCTTTTCGGAGCTGTaGGCACTTGTCCAAGCAGTTGTCGTTGTCCTTGTC | + |
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Preference number: 6 (lower is better) Translates to: AAVVPVATFSEL*ALVQAVVVVLV Trigger: GACAAGGACAACGACAACTGCTTGGACAAGTGCGCACAGCTCCGAAAAGGTGGCTACTGGTACAACTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CAA 72 bp | GTCTGCGCAGCCTGCAGCTGCATGATGTCAATCTGGTaGTTCATCTCAGAGTACTTGCTCTCGGCAGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VCAACSCMMSIW*FISEYLLSAVL Trigger: CAGCACTGCCGAGAGCAAGTACTCTGAGATGAACAACCAGATTGACATCATGCAGCTGCAGGCTGCGCAGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CAA 72 bp | CCCCAGCCAGAAGTCACCTCGGATGCTGCCAAACCCTaGCTTATACTGTCTCCAGTCTTGGTAGAAGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: PQPEVTSDAAKP*LILSPVLVEGD Trigger: GTCTCCTTCTACCAAGACTGGAGACAGTATAAGCAAGGGTTTGGCAGCATCCGAGGTGACTTCTGGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 72 bp | AGTTCCCCAGGAAGAGGCGGTAGCTGTTCAGTTCATTaGCCAACGCAAAGTAGCTATACTCTGCGTAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: SSPGRGGSCSVH*PTQSSYTLRSV Trigger: CACGCTACGCAGAGTATAGCTACTTTGCGTTGGGCAATGAACTGAACAGCTACCGCCTCTTCCTGGGGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CAA 90 bp | GTCACCTCGGATGCTGCCAAACCCTTGCTTATACTGTCTCCAGTCTaGGTAGAAGGAGACAAGGCCACTCTTACGTCTCTGGATGATGGT | + |
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Preference number: 6 (lower is better) Translates to: VTSDAAKPLLILSPV*VEGDKATLTSLDDG Trigger: ACCATCATCCAGAGACGTAAGAGTGGCCTTGTCTCCTTCTACCAAGACTGGAGACAGTATAAGCAAGGGTTTGGCAGCATCCGAGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CAA 72 bp | TGCATGATGTCAATCTGGTTGTTCATCTCAGAGTACTaGCTCTCGGCAGTGCTGAGCCGAGACTCCATGTGC | + |
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Preference number: 6 (lower is better) Translates to: CMMSIWLFISEY*LSAVLSRDSMC Trigger: GCACATGGAGTCTCGGCTCAGCACTGCCGAGAGCAAGTACTCTGAGATGAACAACCAGATTGACATCATGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS CAA 72 bp | TTTCGGAGCTGTGCGCACTTGTCCAAGCAGTTGTCGTaGTCCTTGTCCTTGGTGCTGAAGACGGTGTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: FRSCAHLSKQLS*SLSLVLKTVLL Trigger: TAACAACACCGTCTTCAGCACCAAGGACAAGGACAACGACAACTGCTTGGACAAGTGCGCACAGCTCCGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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| CDS GCA 72 bp | TATGTTCATTCCCCAGCCAGAAGTCACCTCGGATGCTaGCAAACCCTTGCTTATACTGTCTCCAGTCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: YVHSPARSHLGC*QTLAYTVSSLG Trigger: ACCAAGACTGGAGACAGTATAAGCAAGGGTTTGGCAGCATCCGAGGTGACTTCTGGCTGGGGAATGAACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030840.4 |
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