Pregenerated sensors for ANGPTL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002289Ensembl transcript IDs: ENSMUST00000002360.17, ENSMUST00000173869.8
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGTTGCCGTGGGATAGAGTGGAAGTATTGTCCATTGAGATTGGAATaGCTACAGGTACCAAACCACCAGCCACCAGAGAGGCTCTTGGCA | + |
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Preference number: 1 (lower is better) Translates to: RCRGIEWKYCPLRLE*LQVPNHQPPERLLA Trigger: TGCCAAGAGCCTCTCTGGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAATCTCAATGGACAATACTTCCACTCTATCCCACGGCAACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR TCA 90 bp | TATGTGGTGGTCAAAGGCCAACTTTGCGGAATCTGTTCTGTCCTTTaGCCTTTTGGGTGCTTGAACTCAGTCACCAGGCTTAGACAGCAA | + |
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Preference number: 1 (lower is better) Translates to: YVVVKGQLCGICSVL*PFGCLNSVTRLRQQ Trigger: TTGCTGTCTAAGCCTGGTGACTGAGTTCAAGCACCCAAAAGGTCAAAGGACAGAACAGATTCCGCAAAGTTGGCCTTTGACCACCACATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR GCA 90 bp | CCCTTCCATGTTTTCCAGAAGATACCCTTTTTACGCTCCTGCCGTTaGCGTGGGATAGAGTGGAAGTATTGTCCATTGAGATTGGAATGG | + |
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Preference number: 1 (lower is better) Translates to: PFHVFQKIPFLRSCR*RGIEWKYCPLRLEW Trigger: CCATTCCAATCTCAATGGACAATACTTCCACTCTATCCCACGGCAACGGCAGGAGCGTAAAAAGGGTATCTTCTGGAAAACATGGAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR CCA 90 bp | CCATGTTTTCCAGAAGATACCCTTTTTACGCTCCTGCCGTTGCCGTaGGATAGAGTGGAAGTATTGTCCATTGAGATTGGAATGGCTACA | + |
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Preference number: 1 (lower is better) Translates to: PCFPEDTLFTLLPLP*DRVEVLSIEIGMAT Trigger: TGTAGCCATTCCAATCTCAATGGACAATACTTCCACTCTATCCCACGGCAACGGCAGGAGCGTAAAAAGGGTATCTTCTGGAAAACATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR CCA 90 bp | GGCCCTCTGGAAGAACGAATGTTCCTAATCACTGAGCCATCTCCCTaGACCTGTTTTGAGATTTTGAAATATAAACAAGAGAGGCTCACA | + |
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Preference number: 1 (lower is better) Translates to: GPLEERMFLITEPSP*TCFEILKYKQERLT Trigger: TGTGAGCCTCTCTTGTTTATATTTCAAAATCTCAAAACAGGTCCAGGGAGATGGCTCAGTGATTAGGAACATTCGTTCTTCCAGAGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR TCA 90 bp | TTCGTATGTCCAGTTGAGCTACATCTACAGTACTCACCCTGTTTGTaGTACAGGATCTTGTTGTATTGCCTAGTCTGGCTTAGAGTTTGC | + |
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Preference number: 1 (lower is better) Translates to: FVCPVELHLQYSPCL*YRILLYCLVWLRVC Trigger: GCAAACTCTAAGCCAGACTAGGCAATACAACAAGATCCTGTATCACAAACAGGGTGAGTACTGTAGATGTAGCTCAACTGGACATACGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR CCA 90 bp | ACGTCTTTGTTTTTATTAGTCAAGGTCTTACTATATAGCCTAAGTTaGACTCAAACTCATGGTAATTCTGGTCCCCCTGCCTCAGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: TSLFLLVKVLLYSLS*TQTHGNSGPPASAP Trigger: GGGAGCTGAGGCAGGGGGACCAGAATTACCATGAGTTTGAGTCCAACTTAGGCTATATAGTAAGACCTTGACTAATAAAAACAAAGACGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR CCA 90 bp | AAAAACAATTATTGTGTATATATCTGTGTGACAGCCCAAGTGCCATaGCTTGTATGTGGTGGTCAAAGGCCAACTTTGCGGAATCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: KNNYCVYICVTAQVP*LVCGGQRPTLRNLF Trigger: GAACAGATTCCGCAAAGTTGGCCTTTGACCACCACATACAAGCCATGGCACTTGGGCTGTCACACAGATATATACACAATAATTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR TCA 90 bp | TCCTTAACGGATCTGGGAATACGATGTCCGAGGAACATGTTTACTTaGACTTTGAAACTATTCACTTTGAAAAATCAAATGAAACAACAG | + |
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Preference number: 1 (lower is better) Translates to: SLTDLGIRCPRNMFT*TLKLFTLKNQMKQQ Trigger: CTGTTGTTTCATTTGATTTTTCAAAGTGAATAGTTTCAAAGTTCAAGTAAACATGTTCCTCGGACATCGTATTCCCAGATCCGTTAAGGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR-3UTR TCA 90 bp | TTGGAATGGCTACAGGTACCAAACCACCAGCCACCAGAGAGGCTCTTGGCACAGTGGCCGTGGGCTCAGTaGGCTGCAGGCTGTAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: LEWLQVPNHQPPERLLAQWPWAQ*AAGCRL Trigger: CAGCCTACAGCCTGCAGCTCACTGAGCCCACGGCCA...CTGTGCCAAGAGCCTCTCTGGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGGATCAGCAGGGTGGTAGCCTGCAGAGGATAGTAGCGGCCCTTCCATGTTGTATCCAGGGCTCCTaGCACCCTGTCTCCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GLDQQGGSLQRIVAALPCCIQGS*HPVSSQ Trigger: CTGACTGGAGACAGGGTGCCAGGAGCCCTGGATACA...ACATGGAAGGGCCGCTACTATCCTCTGCAGGCTACCACCCTGCTGATCCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGGCCCAGCCAGAACTCGCCTTGGGGATCTCCGAAGCCATCCTTGTAGGCTGTCCAGCCTCCATCTaGAGTCATCTCACAGTTGAC | + |
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Preference number: 2 (lower is better) Translates to: FQAQPELALGISEAILVGCPASI*SHLTVD Trigger: GTCAACTGTGAGATGACTTCAGATGGAGGCTGGACA...GCCTACAAGGATGGCTTCGGAGATCCCCAAGGCGAGTTCTGGCTGGGCCTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR CCA 90 bp | GCGGCCCTTCCATGTTTTCCAGAAGATACCCTTTTTACGCTCCTGCCGTTGCCGTGCCGCTCCCCTTCTTaGAAGAGTTCCTGGCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: AALPCFPEDTLFTLLPLPCRSPS*KSSWQS Trigger: GGACTGCCAGGAACTCTTCCAAGAAGGGGAGCGGCA...CGGCAACGGCAGGAGCGTAAAAAGGGTATCTTCTGGAAAACATGGAAGGGCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCACAAGACGCAGATAGCCCTACTTAGAGCTCCTGCCCCCAGCAGAGAATGGTGGAAAAGTCCACTGTaGCGCTCCCCTTCTTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: VHKTQIALLRAPAPSREWWKSPL*RSPSWK Trigger: CTTCCAAGAAGGGGAGCGGCACAGTGGACTTTTCCA...CCATTCTCTGCTGGGGGCAGGAGCTCTAAGTAGGGCTATCTGCGTCTTGTGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGAATGGCTACAGGTACCAAACCACCAGCCACCAGAGAGGCTCTTGGCACAGTCCCAGTCCTGGAGCTaGACAGCCAATTGGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LEWLQVPNHQPPERLLAQSQSWS*TANWLP Trigger: AGGAAGCCAATTGGCTGTGCAGCTCCAGGACTGGGA...CTGTGCCAAGAGCCTCTCTGGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATCCACAGCACCTACAACAGGCTGTGAGCTGTGCCTaGGAACCACAGTTAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: SCAWEPQLAPVHPQHLQQAVSCA*EPQLAP Trigger: AGGTGCTAACTGTGGTTCCCAGGCACAGCTCACAGC...CTGTTGTAGGTGCTGTGGATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCCAGGGGCTGGAGATCTGTGTGTACCCCACCGAGTACTGATCAGAAAGACCTGCTATGTAAAGGCTaGGAACCAAACCCAGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: APRGWRSVCTPPSTDQKDLLCKG*EPNPGP Trigger: AGGGCCTGGGTTTGGTTCCCAGCCTTTACATAGCAG...GTCTTTCTGATCAGTACTCGGTGGGGTACACACAGATCTCCAGCCCCTGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCTTTGTCCACAAGACGCAGATAGCCCTACTTAGAGCTCCTGCCCCCAGCGGAGACCCCAGAGGCTaGATCTGGAAAAGTCCACTG | + |
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Preference number: 2 (lower is better) Translates to: FFFVHKTQIALLRAPAPSGDPRG*IWKSPL Trigger: CAGTGGACTTTTCCAGATCCAGCCTCTGGGGTCTCC...GCTGGGGGCAGGAGCTCTAAGTAGGGCTATCTGCGTCTTGTGGACAAAGAAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCACAAGACGCAGATAGCCCTACTTAGAGCTCCTGCCCCCAGCAGAGAATGGGTTGACCAAAAATGGTaGAGACCCCAGAGGCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: VHKTQIALLRAPAPSREWVDQKW*RPQRLD Trigger: ATCCAGCCTCTGGGGTCTCCACCATTTTTGGTCAAC...CCATTCTCTGCTGGGGGCAGGAGCTCTAAGTAGGGCTATCTGCGTCTTGTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR CAA 90 bp | TCCTGCCGTTGCCGTGGGATAGAGTGGAAGTATTGTCCATTGAGATaGGAATGGCTACAGGTACCAAACCACCAGCCACCAGAGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: SCRCRGIEWKYCPLR*EWLQVPNHQPPERL Trigger: GAGCCTCTCTGGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAATCTCAATGGACAATACTTCCACTCTATCCCACGGCAACGGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATCCACAGCACCTACAACAGGTGTATATATCTGTGTaGCAGCCCAAGTGCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: SCAWEPQLAPVHPQHLQQVYISV*QPKCHG Trigger: GCCATGGCACTTGGGCTGTCACACAGATATATACAC...CTGTTGTAGGTGCTGTGGATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR-3UTR TCA 90 bp | GATTGGAATGGCTACAGGTACCAAACCACCAGCCACCAGAGAGGCTCTTGGCACTTCCTCGGTTCCCTGTaGTGCTGTGCATCTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: DWNGYRYQTTSHQRGSWHFLGSL*CCASFP Trigger: TGGAAAAGATGCACAGCATCACAGGGAACCGAGGAA...GTGCCAAGAGCCTCTCTGGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR CAA 90 bp | TTACGCTCCTGCCGTTGCCGTGGGATAGAGTGGAAGTATTGTCCATaGAGATTGGAATGGCTACAGGTACCAAACCACCAGCCACCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LRSCRCRGIEWKYCP*RLEWLQVPNHQPPE Trigger: CTCTGGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAATCTCAATGGACAATACTTCCACTCTATCCCACGGCAACGGCAGGAGCGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATCCACAGCACCTACAACAGCGAGCCCATGTTTTCTaGATCTGGGCCATTTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: SCAWEPQLAPVHPQHLQQRAHVF*IWAICF Trigger: GAAACAAATGGCCCAGATCCAGAAAACATGGGCTCG...CTGTTGTAGGTGCTGTGGATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCCAGTCAGTCAATATGACTGAGTCCGCCATTAAGGGCCCAGCTAGTTGGATTGTAAGAATGCTGTaGGCTGTGCCTGGGAACCAC | + |
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Preference number: 2 (lower is better) Translates to: CLQSVNMTESAIKGPASWIVRML*AVPGNH Trigger: GTGGTTCCCAGGCACAGCTCACAGCATTCTTACAAT...CCAACTAGCTGGGCCCTTAATGGCGGACTCAGTCATATTGACTGACTGGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATCCACAGCACCTACAACAGACTGAGCCATCTCCCTaGACCTGTTTTGAGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: SCAWEPQLAPVHPQHLQQTEPSP*TCFEIL Trigger: CAAAATCTCAAAACAGGTCCAGGGAGATGGCTCAGT...CTGTTGTAGGTGCTGTGGATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR CAA 90 bp | ACAGCCCAAGTGCCATGGCTTGTATGTGGTGGTCAAAGGCCAACTTaGCGGAATCTGTTCTGTCCTTTGACCTTTTGGGTGCTTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: TAQVPWLVCGGQRPT*RNLFCPLTFWVLEL Trigger: GAGTTCAAGCACCCAAAAGGTCAAAGGACAGAACAGATTCCGCAAAGTTGGCCTTTGACCACCACATACAAGCCATGGCACTTGGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGCTCCTGGCACCCTGTCTCCAGTCAGTCAATATGACTGAGTCCGCCATTCCATTTGTTTCCTGTTaGTCTGACTGTTTCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: PGLLAPCLQSVNMTESAIPFVSC*SDCFRQ Trigger: TTGTCTGAAACAGTCAGAGCAACAGGAAACAAATGG...AATGGCGGACTCAGTCATATTGACTGACTGGAGACAGGGTGCCAGGAGCCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| 3UTR-3UTR GCA 90 bp | TATTGTAAGAATGCTGTGAGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATGGAGCAATTTGGCATTaGCATCCCAGTCCTGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: YCKNAVSCAWEPQLAPVHGAIWH*HPSPGA Trigger: AGCTCCAGGACTGGGATGGCAATGCCAAATTGCTCC...ATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCTCACAGCATTCTTACAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR CCA 90 bp | AAATCACTGGGAAGGAATAGCCAACCAGTTCTGTCCTTAACGGATCTGGGAATAGCTGTGAGCTGTGCCTaGGAACCACAGTTAGCACCT | + |
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Preference number: 2 (lower is better) Translates to: KSLGRNSQPVLSLTDLGIAVSCA*EPQLAP Trigger: AGGTGCTAACTGTGGTTCCCAGGCACAGCTCACAGC...TATTCCCAGATCCGTTAAGGACAGAACTGGTTGGCTATTCCTTCCCAGTGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR-3UTR CCA 90 bp | TATTGTAAGAATGCTGTGAGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATACAGCCCAAGTGCCATaGCTTGTATGTGGTGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: YCKNAVSCAWEPQLAPVHTAQVP*LVCGGQ Trigger: TTGACCACCACATACAAGCCATGGCACTTGGGCTGT...ATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCTCACAGCATTCTTACAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR-3UTR CCA 90 bp | TTGGAATGGCTACAGGTACCAAACCACCAGCCACCAGAGAGGCTCTTGGCACAGAAATGGATGGGAAATTaGAGCAATTTGGCATTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LEWLQVPNHQPPERLLAQKWMGN*SNLALP Trigger: TGGCAATGCCAAATTGCTCCAATTTCCCATCCATTT...CTGTGCCAAGAGCCTCTCTGGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR CAA 90 bp | GCCCTTCCATGTTTTCCAGAAGATACCCTTTTTACGCTCCTGCCGTaGCCGTGGGATAGAGTGGAAGTATTGTCCATTGAGATTGGAATG | + |
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Preference number: 2 (lower is better) Translates to: ALPCFPEDTLFTLLP*PWDRVEVLSIEIGM Trigger: CATTCCAATCTCAATGGACAATACTTCCACTCTATCCCACGGCAACGGCAGGAGCGTAAAAAGGGTATCTTCTGGAAAACATGGAAGGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR TCA 90 bp | TCACTGGGAAGGAATAGCCAACCAGTTCTGTCCTTAACGGATCTGGGAATACGATCCAGTCAGTCAATATaGCTGAGTCCGCCATTAAGG | + |
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Preference number: 2 (lower is better) Translates to: SLGRNSQPVLSLTDLGIRSSQSI*LSPPLR Trigger: CCTTAATGGCGGACTCAGTCATATTGACTGACTGGA...TCGTATTCCCAGATCCGTTAAGGACAGAACTGGTTGGCTATTCCTTCCCAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR-3UTR GCA 90 bp | AGATTGGAATGGCTACAGGTACCAAACCACCAGCCACCAGAGAGGCTCTTGGCACCATTTGTTTCCTGTTaGTCTGACTGTTTCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: RLEWLQVPNHQPPERLLAPFVSC*SDCFRQ Trigger: TTGTCTGAAACAGTCAGAGCAACAGGAAACAAATGG...TGCCAAGAGCCTCTCTGGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCCAGTCAGTCAATATGACTGAGTCCGCCATTAAGGGCCCAGCTAGTTGGCTAAAAGAAGGAAGCTaGAATCACTGGGAAGGAATA | + |
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Preference number: 2 (lower is better) Translates to: CLQSVNMTESAIKGPASWLKEGS*NHWEGI Trigger: TATTCCTTCCCAGTGATTTCAGCTTCCTTCTTTTAG...CCAACTAGCTGGGCCCTTAATGGCGGACTCAGTCATATTGACTGACTGGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR-3UTR TCA 90 bp | GAGCCCATGTTTTCTGGATCTGGGCCATTTGTTTCCTGTTGCTCTGACTGTTTCAAGTCATCTCACAGTTaGCCAAAAATGGTGGAGACC | + |
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Preference number: 2 (lower is better) Translates to: EPMFSGSGPFVSCCSDCFKSSHS*PKMVET Trigger: GGTCTCCACCATTTTTGGTCAACTGTGAGATGACTT...GAAACAGTCAGAGCAACAGGAAACAAATGGCCCAGATCCAGAAAACATGGGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR TCA 90 bp | GGGATAGAGTGGAAGTATTGTCCATTGAGATTGGAATGGCTACAGGTACCAAACTCCAGTCAGTCAATATaGCTGAGTCCGCCATTAAGG | + |
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Preference number: 2 (lower is better) Translates to: GIEWKYCPLRLEWLQVPNSSQSI*LSPPLR Trigger: CCTTAATGGCGGACTCAGTCATATTGACTGACTGGA...GTTTGGTACCTGTAGCCATTCCAATCTCAATGGACAATACTTCCACTCTATCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR TCA 90 bp | AACAATTATTGTGTATATATCTGTGTGACAGCCCAAGTGCCATGGCTTGTATGTCCTACAACAGCACCATaGGTGTATCCAGGGCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: NNYCVYICVTAQVPWLVCPTTAP*VYPGLL Trigger: CAGGAGCCCTGGATACACTCATGGTGCTGTTGTAGG...ACATACAAGCCATGGCACTTGGGCTGTCACACAGATATATACACAATAATTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR-3UTR CCA 90 bp | TATTGTAAGAATGCTGTGAGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATCATGTTTTCTGGATCTaGGCCATTTGTTTCCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: YCKNAVSCAWEPQLAPVHHVFWI*AICFLL Trigger: CAACAGGAAACAAATGGCCCAGATCCAGAAAACATG...ATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCTCACAGCATTCTTACAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| 3UTR CAA 90 bp | GATCTGTGTGTACCCCACCGAGTACTGATCAGAAAGACTTTTTACTaGTCTCTATCACCAACTTCCCTAATGATTGGACTGCATGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: DLCVPHRVLIRKTFY*SLSPTSLMIGLHEL Trigger: TAACTCATGCAGTCCAATCATTAGGGAAGTTGGTGATAGAGACAAGTAAAAAGTCTTTCTGATCAGTACTCGGTGGGGTACACACAGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR-3UTR GCA 90 bp | CACCGAGTACTGATCAGAAAGACTTTTTACTTGTCTCTATCACCAACTTCCCTAGTCAAAGGCCAACTTTaGGGAATCTGTTCTGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: HRVLIRKTFYLSLSPTSLVKGQL*GICSVL Trigger: AAGGACAGAACAGATTCCGCAAAGTTGGCCTTTGAC...TAGGGAAGTTGGTGATAGAGACAAGTAAAAAGTCTTTCTGATCAGTACTCGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| 3UTR GCA 72 bp | GCCTGGAACCAGGCTCCAGTGAGGAGGCTAAGAGGCTaGTGTAGCCTCCATGGGCTGGATCAGCAGGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: AWNQAPVRRLRG*CSLHGLDQQGG Trigger: ACCACCCTGCTGATCCAGCCCATGGAGGCTACAGCAGCCTCTTAGCCTCCTCACTGGAGCCTGGTTCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTGTCTCCAGTCAGTCAATATGACTGAGTCCGCCATTAAGGGCCCAGCTAGTGTGCCGCTCCCCTTCTaGGAAGAGTTCCTGGCAGTC | + |
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Preference number: 3 (lower is better) Translates to: PCLQSVNMTESAIKGPASVPLPF*EEFLAV Trigger: GACTGCCAGGAACTCTTCCAAGAAGGGGAGCGGCAC...ACTAGCTGGGCCCTTAATGGCGGACTCAGTCATATTGACTGACTGGAGACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| 3UTR TCA 72 bp | CAGGGCTCCTGGCACCCTGTCTCCAGTCAGTCAATATaGCTGAGTCCGCCATTAAGGGCCCAGCTAGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: QGSWHPVSSQSI*LSPPLRAQLVG Trigger: TCCAACTAGCTGGGCCCTTAATGGCGGACTCAGTCATATTGACTGACTGGAGACAGGGTGCCAGGAGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| 3UTR CCA 72 bp | GAGTTTGCAAAGCTCCTATGTCCAGCTCCCAGGGGCTaGAGATCTGTGTGTACCCCACCGAGTACTGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: EFAKLLCPAPRG*RSVCTPPSTDQ Trigger: CTGATCAGTACTCGGTGGGGTACACACAGATCTCCAGCCCCTGGGAGCTGGACATAGGAGCTTTGCAAACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR CCA 72 bp | TGTAAGTGGGTGGCGTTGGGAGTCAAGCCAATGAGCTaGGTCATCTTGGGAAGCCTCTTTCCCCTCGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: CKWVALGVKPMS*VILGSLFPLEV Trigger: GACTTCGAGGGGAAAGAGGCTTCCCAAGATGACCCAGCTCATTGGCTTGACTCCCAACGCCACCCACTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| 3UTR CCA 72 bp | TTGGCACAGTTAAGGTCCCCACGGAGGTCATGGTCTTaGTCCCAAGTAGAGAAGGGCAGGGAAAGGCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: LAQLRSPRRSWS*SQVEKGRERPL Trigger: CAATGGCCTTTCCCTGCCCTTCTCTACTTGGGACCAAGACCATGACCTCCGTGGGGACCTTAACTGTGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| 3UTR GCA 72 bp | CCCCCAAATGGATGGGAAATTGGAGCAATTTGGCATTaGCATCCCAGTCCTGGAGCTGCACAGCCAATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PPNGWEIGAIWH*HPSPGAAQPIG Trigger: GCCAATTGGCTGTGCAGCTCCAGGACTGGGATGGCAATGCCAAATTGCTCCAATTTCCCATCCATTTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGCACCTACAACAGCACCATGAGTGTATCCAGGGCTCCTGGCACCCTGTCCAAATGGATGGGAAATaGGAGCAATTTGGCATTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PQHLQQHHECIQGSWHPVQMDGK*EQFGIA Trigger: GGCAATGCCAAATTGCTCCAATTTCCCATCCATTTG...GACAGGGTGCCAGGAGCCCTGGATACACTCATGGTGCTGTTGTAGGTGCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTGGCACAGTTAAGGTCCCCACGGAGGTCATGGTCTTGGTCCCAAGTAGAGTTCAGACAACAATGCTaGCAGACCCCAACACGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLAQLRSPRRSWSWSQVEFRQQC*QTPTRK Trigger: TTTCCGTGTTGGGGTCTGCAAGCATTGTTGTCTGAA...CTCTACTTGGGACCAAGACCATGACCTCCGTGGGGACCTTAACTGTGCCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCACAAGACGCAGATAGCCCTACTTAGAGCTCCTGCCCCCAGCAGAGAATGGGAAGTCATCTCACAGTaGACCAAAAATGGTGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VHKTQIALLRAPAPSREWEVISQ*TKNGGD Trigger: GTCTCCACCATTTTTGGTCAACTGTGAGATGACTTC...CCATTCTCTGCTGGGGGCAGGAGCTCTAAGTAGGGCTATCTGCGTCTTGTGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| 3UTR GCA 72 bp | AGGATCTTGTTGTATTGCCTAGTCTGGCTTAGAGTTTaGAAAGCTCCTATGTCCAGCTCCCAGGGGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RILLYCLVWLRV*KAPMSSSQGLE Trigger: CTCCAGCCCCTGGGAGCTGGACATAGGAGCTTTGCAAACTCTAAGCCAGACTAGGCAATACAACAAGATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR GCA 72 bp | TGCAGTGCTGCTGGGAAAGAACCCAGGGTCTGTGCATaGTTCGTATGTCCAGTTGAGCTACATCTACAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: CSAAGKEPRVCA*FVCPVELHLQY Trigger: GTACTGTAGATGTAGCTCAACTGGACATACGAAGCATGCACAGACCCTGGGTTCTTTCCCAGCAGCACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR CCA 72 bp | GGGATAGAGTGGAAGTATTGTCCATTGAGATTGGAATaGCTACAGGTACCAAACCACCAGCCACCAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GIEWKYCPLRLE*LQVPNHQPPER Trigger: CCTCTCTGGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAATCTCAATGGACAATACTTCCACTCTATCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| 3UTR CCA 72 bp | GGTTGTTTTTATTGTAAGAATGCTGTGAGCTGTGCCTaGGAACCACAGTTAGCACCTGTGCATCCACAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GCFYCKNAVSCA*EPQLAPVHPQH Trigger: GTGCTGTGGATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCTCACAGCATTCTTACAATAAAAACAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| 3UTR TCA 72 bp | AGAACCCAGGGTCTGTGCATGCTTCGTATGTCCAGTTaGGCTACATCTACAGTACTCACCCTGTTTGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: RTQGLCMLRMSS*ATSTVLTLFVI Trigger: TATCACAAACAGGGTGAGTACTGTAGATGTAGCTCAACTGGACATACGAAGCATGCACAGACCCTGGGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR GCA 72 bp | GTTTTCCAGAAGATACCCTTTTTACGCTCCTGCCGTTaGCGTGGGATAGAGTGGAAGTATTGTCCATTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: VFQKIPFLRSCR*RGIEWKYCPLR Trigger: TCTCAATGGACAATACTTCCACTCTATCCCACGGCAACGGCAGGAGCGTAAAAAGGGTATCTTCTGGAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| 3UTR GCA 72 bp | TTCCATGTTTTCCAGAAGATACCCTTTTTACGCTCCTaGCGTTGCCGTGGGATAGAGTGGAAGTATTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: FHVFQKIPFLRS*RCRGIEWKYCP Trigger: TGGACAATACTTCCACTCTATCCCACGGCAACGGCAGGAGCGTAAAAAGGGTATCTTCTGGAAAACATGGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| 3UTR CCA 72 bp | TATTGTGTATATATCTGTGTGACAGCCCAAGTGCCATaGCTTGTATGTGGTGGTCAAAGGCCAACTTTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: YCVYICVTAQVP*LVCGGQRPTLR Trigger: CCGCAAAGTTGGCCTTTGACCACCACATACAAGCCATGGCACTTGGGCTGTCACACAGATATATACACAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR TCA 72 bp | CCAGTTGAGCTACATCTACAGTACTCACCCTGTTTGTaGTACAGGATCTTGTTGTATTGCCTAGTCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PVELHLQYSPCL*YRILLYCLVWL Trigger: AAGCCAGACTAGGCAATACAACAAGATCCTGTATCACAAACAGGGTGAGTACTGTAGATGTAGCTCAACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR CCA 72 bp | TTTTTATTAGTCAAGGTCTTACTATATAGCCTAAGTTaGACTCAAACTCATGGTAATTCTGGTCCCCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: FLLVKVLLYSLS*TQTHGNSGPPA Trigger: GGCAGGGGGACCAGAATTACCATGAGTTTGAGTCCAACTTAGGCTATATAGTAAGACCTTGACTAATAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR CCA 72 bp | GAAGAACGAATGTTCCTAATCACTGAGCCATCTCCCTaGACCTGTTTTGAGATTTTGAAATATAAACAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: EERMFLITEPSP*TCFEILKYKQE Trigger: CTCTTGTTTATATTTCAAAATCTCAAAACAGGTCCAGGGAGATGGCTCAGTGATTAGGAACATTCGTTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR TCA 72 bp | GATCTGGGAATACGATGTCCGAGGAACATGTTTACTTaGACTTTGAAACTATTCACTTTGAAAAATCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: DLGIRCPRNMFT*TLKLFTLKNQM Trigger: CATTTGATTTTTCAAAGTGAATAGTTTCAAAGTTCAAGTAAACATGTTCCTCGGACATCGTATTCCCAGATC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR GCA 90 bp | GTGAGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATCCACAGCACCTACAATCCAGCGCGCCCAGCTaGCCACGGGTGCGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VSCAWEPQLAPVHPQHLQSSAPS*PRVRST Trigger: CGTGGAGCGCACCCGTGGGCAGCTGGGCGCGCTGGA...TTGTAGGTGCTGTGGATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCTCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTAGAGTTTGCAAAGCTCCTATGTCCAGCTCCCAGGGGCTGGAGATCTGTGCGGTGGCTCTGGCTGTaGAGGGCGCCCTTGCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLEFAKLLCPAPRGWRSVRWLWL*RAPLRA Trigger: AGCGCGCAAGGGCGCCCTGCACAGCCAGAGCCACCG...CACAGATCTCCAGCCCCTGGGAGCTGGACATAGGAGCTTTGCAAACTCTAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR GCA 90 bp | GTTGGGAGTCAAGCCAATGAGCTGGGTCATCTTGGGAAGCCTCTTTCCCCTCGACGGTGGCTCTGGCTGTaGAGGGCGCCCTTGCGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGSQANELGHLGKPLSPRRWLWL*RAPLRA Trigger: AGCGCGCAAGGGCGCCCTGCACAGCCAGAGCCACCG...TCGAGGGGAAAGAGGCTTCCCAAGATGACCCAGCTCATTGGCTTGACTCCCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| 3UTR CAA 72 bp | TGGCAGTCCCGGGGCGGCCTGTGTAAGTGGGTGGCGTaGGGAGTCAAGCCAATGAGCTGGGTCATCTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WQSRGGLCKWVA*GVKPMSWVILG Trigger: TCCCAAGATGACCCAGCTCATTGGCTTGACTCCCAACGCCACCCACTTACACAGGCCGCCCCGGGACTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGATCAGCAGGGTGGTAGCCTGCAGAGGATAGTAGCGGCCCTTCCATGTCATCTCGTCCCAGGATaGAAAGCGCGGTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLDQQGGSLQRIVAALPCHLVPG*KARWLW Trigger: CCAGAGCCACCGCGCTTTGCATCCTGGGACGAGATG...ACATGGAAGGGCCGCTACTATCCTCTGCAGGCTACCACCCTGCTGATCCAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATCCACAGCACCTACAATGTTCGCGCAGCCCATaGCCGAGCTGTAGCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VSCAWEPQLAPVHPQHLQCSRSP*PSCSSP Trigger: CGGGCTGCTACAGCTCGGCCATGGGCTGCGCGAACA...TTGTAGGTGCTGTGGATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATCCACAGCACCTACAATTTCCCTTGGGCCCCTaGCAAGCGTTACCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSCAWEPQLAPVHPQHLQFPLGP*QALPQA Trigger: TGCCTGTGGTAACGCTTGTCAGGGGCCCAAGGGAAA...TTGTAGGTGCTGTGGATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAATGGCTACAGGTACCAAACCACCAGCCACCAGAGAGGCTCTTGGCACAGTTTCCCTTGGGCCCCTaGCAAGCGTTACCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEWLQVPNHQPPERLLAQFPLGP*QALPQA Trigger: TGCCTGTGGTAACGCTTGTCAGGGGCCCAAGGGAAA...CTGTGCCAAGAGCCTCTCTGGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| CDS-3UTR GCA 90 bp | TCACTGGGAAGGAATAGCCAACCAGTTCTGTCCTTAACGGATCTGGGAATACGACCAGCTGCCCACGGGTaGGCTCCACGTGTTCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGRNSQPVLSLTDLGIRPAAHG*APRVRA Trigger: TGCGCGAACACGTGGAGCGCACCCGTGGGCAGCTGG...TCGTATTCCCAGATCCGTTAAGGACAGAACTGGTTGGCTATTCCTTCCCAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR GCA 90 bp | CAGCACCTACAACAGCACCATGAGTGTATCCAGGGCTCCTGGCACCCTGTCTCCTGGAAAAGTCCACTGTaGCGCTCCCCTTCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHLQQHHECIQGSWHPVSWKSPL*RSPSWK Trigger: CTTCCAAGAAGGGGAGCGGCACAGTGGACTTTTCCA...GGAGACAGGGTGCCAGGAGCCCTGGATACACTCATGGTGCTGTTGTAGGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CCA 90 bp | CAGCACCTACAACAGCACCATGAGTGTATCCAGGGCTCCTGGCACCCTGTCTCCAGAGTCTCAGGAGTCTaGCCTTCAGGGACTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: QHLQQHHECIQGSWHPVSRVSGV*PSGTLS Trigger: GGATAGAGTCCCTGAAGGCCAGACTCCTGAGACTCT...GGAGACAGGGTGCCAGGAGCCCTGGATACACTCATGGTGCTGTTGTAGGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCCAGGGGCTGGAGATCTGTGTGTACCCCACCGAGTACTGATCAGAAAGACTCCCCACGGAGGTCATaGTCTTGGTCCCAAGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: APRGWRSVCTPPSTDQKDSPRRS*SWSQVE Trigger: CTCTACTTGGGACCAAGACCATGACCTCCGTGGGGA...GTCTTTCTGATCAGTACTCGGTGGGGTACACACAGATCTCCAGCCCCTGGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR CAA 72 bp | CTACAGGTACCAAACCACCAGCCACCAGAGAGGCTCTaGGCACAGTTAAGGTCCCCACGGAGGTCATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQVPNHQPPERL*AQLRSPRRSWS Trigger: AGACCATGACCTCCGTGGGGACCTTAACTGTGCCAAGAGCCTCTCTGGTGGCTGGTGGTTTGGTACCTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCCATGTTTTCTGGATCTGGGCCATTTGTTTCCTGTTGCTCTGACTGTTTCTGGCCGTGGGCTCAGTaGGCTGCAGGCTGTAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EPMFSGSGPFVSCCSDCFWPWAQ*AAGCRL Trigger: CAGCCTACAGCCTGCAGCTCACTGAGCCCACGGCCA...GAAACAGTCAGAGCAACAGGAAACAAATGGCCCAGATCCAGAAAACATGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR TCA 90 bp | GTCCACAAGACGCAGATAGCCCTACTTAGAGCTCCTGCCCCCAGCAGAGAATGGTGTCCAGCCTCCATCTaGAGTCATCTCACAGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VHKTQIALLRAPAPSREWCPASI*SHLTVD Trigger: GTCAACTGTGAGATGACTTCAGATGGAGGCTGGACA...CCATTCTCTGCTGGGGGCAGGAGCTCTAAGTAGGGCTATCTGCGTCTTGTGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CCA 90 bp | TGTCTCCAGTCAGTCAATATGACTGAGTCCGCCATTAAGGGCCCAGCTAGTTGGTGCCGCTCCCCTTCTTaGAAGAGTTCCTGGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CLQSVNMTESAIKGPASWCRSPS*KSSWQS Trigger: GGACTGCCAGGAACTCTTCCAAGAAGGGGAGCGGCA...CCAACTAGCTGGGCCCTTAATGGCGGACTCAGTCATATTGACTGACTGGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR GCA 90 bp | GAGCCCATGTTTTCTGGATCTGGGCCATTTGTTTCCTGTTGCTCTGACTGTTTCCATCTCGTCCCAGGATaGAAAGCGCGGTGGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EPMFSGSGPFVSCCSDCFHLVPG*KARWLW Trigger: CCAGAGCCACCGCGCTTTGCATCCTGGGACGAGATG...GAAACAGTCAGAGCAACAGGAAACAAATGGCCCAGATCCAGAAAACATGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTCCTGTTGCTCTGACTGTTTCAGACAACAATGCTTGCAGACCCCAACATGTTCGCGCAGCCCATaGCCGAGCTGTAGCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FVSCCSDCFRQQCLQTPTCSRSP*PSCSSP Trigger: CGGGCTGCTACAGCTCGGCCATGGGCTGCGCGAACA...TGTTGGGGTCTGCAAGCATTGTTGTCTGAAACAGTCAGAGCAACAGGAAACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCCAGGGGCTGGAGATCTGTGTGTACCCCACCGAGTACTGATCAGAAAGACAAGTCATCTCACAGTTaGCCAAAAATGGTGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: APRGWRSVCTPPSTDQKDKSSHS*PKMVET Trigger: GGTCTCCACCATTTTTGGTCAACTGTGAGATGACTT...GTCTTTCTGATCAGTACTCGGTGGGGTACACACAGATCTCCAGCCCCTGGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR TCA 90 bp | CCAGGGCTCCTGGCACCCTGTCTCCAGTCAGTCAATATGACTGAGTCCGCCATTGGAAGTATTGTCCATTaGGATTGGAATGGCTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLLAPCLQSVNMTESAIGSIVH*DWNGYR Trigger: CCTGTAGCCATTCCAATCTCAATGGACAATACTTCC...AATGGCGGACTCAGTCATATTGACTGACTGGAGACAGGGTGCCAGGAGCCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR GCA 90 bp | ATTACAGTGTTATCTAGCGCTATACTTTATTTATGCAGTGCTGCTGGGAAAGAATCCAGCGCGCCCAGCTaGCCACGGGTGCGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ITVLSSAILYLCSAAGKESSAPS*PRVRST Trigger: CGTGGAGCGCACCCGTGGGCAGCTGGGCGCGCTGGA...TTCTTTCCCAGCAGCACTGCATAAATAAAGTATAGCGCTAGATAACACTGTAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR GCA 90 bp | TGTCTCCAGTCAGTCAATATGACTGAGTCCGCCATTAAGGGCCCAGCTAGTTGGGGAGTCTTTGAAGGGTaGATCTTTTCCCTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLQSVNMTESAIKGPASWGVFEG*IFSLGP Trigger: GGGCCCAAGGGAAAAGATGCACCCTTCAAAGACTCC...CCAACTAGCTGGGCCCTTAATGGCGGACTCAGTCATATTGACTGACTGGAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTCTGTGCATGCTTCGTATGTCCAGTTGAGCTACATCTACAGTACTCACCCTCCCAGTCCTGGAGCTaGACAGCCAATTGGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVCACFVCPVELHLQYSPSQSWS*TANWLP Trigger: AGGAAGCCAATTGGCTGTGCAGCTCCAGGACTGGGA...GGGTGAGTACTGTAGATGTAGCTCAACTGGACATACGAAGCATGCACAGACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CCA 90 bp | CCCCACCGAGTACTGATCAGAAAGACTTTTTACTTGTCTCTATCACCAACTTCCTCTTGGAAGAGTTCCTaGCAGTCCCGGGGCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHRVLIRKTFYLSLSPTSSWKSS*QSRGGL Trigger: CAGGCCGCCCCGGGACTGCCAGGAACTCTTCCAAGA...GGAAGTTGGTGATAGAGACAAGTAAAAAGTCTTTCTGATCAGTACTCGGTGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CCA 90 bp | TTCTTCTTTGTCCACAAGACGCAGATAGCCCTACTTAGAGCTCCTGCCCCCAGCGTTGACCAAAAATGGTaGAGACCCCAGAGGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FFFVHKTQIALLRAPAPSVDQKW*RPQRLD Trigger: ATCCAGCCTCTGGGGTCTCCACCATTTTTGGTCAAC...GCTGGGGGCAGGAGCTCTAAGTAGGGCTATCTGCGTCTTGTGGACAAAGAAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CCA 90 bp | GAGCCCATGTTTTCTGGATCTGGGCCATTTGTTTCCTGTTGCTCTGACTGTTTCTGGGGGAAACATTGGTaGCACCCAGCTCATTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EPMFSGSGPFVSCCSDCFWGKHW*HPAHWP Trigger: CGGCCAATGAGCTGGGTGCCACCAATGTTTCCCCCA...GAAACAGTCAGAGCAACAGGAAACAAATGGCCCAGATCCAGAAAACATGGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR TCA 90 bp | GTTGGGAGTCAAGCCAATGAGCTGGGTCATCTTGGGAAGCCTCTTTCCCCTCGACAAGAGGTCTGGCTCTaGAGATTCTGTATTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGSQANELGHLGKPLSPRQEVWL*RFCILR Trigger: TCTGAGAATACAGAATCTTCAGAGCCAGACCTCTTG...TCGAGGGGAAAGAGGCTTCCCAAGATGACCCAGCTCATTGGCTTGACTCCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGATCAGCAGGGTGGTAGCCTGCAGAGGATAGTAGCGGCCCTTCCATGTTGTATTCTCAGATTCTaGTTTGATAGGTATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLDQQGGSLQRIVAALPCCILRF*FDRYLC Trigger: GCAGAGATACCTATCAAAGCAGAATCTGAGAATACA...ACATGGAAGGGCCGCTACTATCCTCTGCAGGCTACCACCCTGCTGATCCAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCCATGTTTTCTGGATCTGGGCCATTTGTTTCCTGTTGCTCTGACTGTTTCGGAGACCCCAGAGGCTaGATCTGGAAAAGTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EPMFSGSGPFVSCCSDCFGDPRG*IWKSPL Trigger: CAGTGGACTTTTCCAGATCCAGCCTCTGGGGTCTCC...GAAACAGTCAGAGCAACAGGAAACAAATGGCCCAGATCCAGAAAACATGGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR GCA 90 bp | GAGCCCATGTTTTCTGGATCTGGGCCATTTGTTTCCTGTTGCTCTGACTGTTTCGGAGTCTTTGAAGGGTaGATCTTTTCCCTTGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EPMFSGSGPFVSCCSDCFGVFEG*IFSLGP Trigger: GGGCCCAAGGGAAAAGATGCACCCTTCAAAGACTCC...GAAACAGTCAGAGCAACAGGAAACAAATGGCCCAGATCCAGAAAACATGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| CDS-3UTR GCA 90 bp | TATTGTAAGAATGCTGTGAGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATTTCCCTGTGATGCTGTaGATCTTTTCCAGGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YCKNAVSCAWEPQLAPVHFPVML*IFSRPS Trigger: GCTGGGCCTGGAAAAGATGCACAGCATCACAGGGAA...ATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCTCACAGCATTCTTACAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGTTACGGGCTTCTTCTTTGTCCACAAGACGCAGATAGCCCTACTTAGAGGAGCAATTTGGCATTaGCATCCCAGTCCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPVTGFFFVHKTQIALLRGAIWH*HPSPGA Trigger: AGCTCCAGGACTGGGATGGCAATGCCAAATTGCTCC...TCTAAGTAGGGCTATCTGCGTCTTGTGGACAAAGAAGAAGCCCGTAACTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CCA 90 bp | GAGCCCATGTTTTCTGGATCTGGGCCATTTGTTTCCTGTTGCTCTGACTGTTTCAGAGTCTCAGGAGTCTaGCCTTCAGGGACTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: EPMFSGSGPFVSCCSDCFRVSGV*PSGTLS Trigger: GGATAGAGTCCCTGAAGGCCAGACTCCTGAGACTCT...GAAACAGTCAGAGCAACAGGAAACAAATGGCCCAGATCCAGAAAACATGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| 3UTR CAA 72 bp | GGTCAAAGGCCAACTTTGCGGAATCTGTTCTGTCCTTaGACCTTTTGGGTGCTTGAACTCAGTCACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQRPTLRNLFCP*TFWVLELSHQA Trigger: AGCCTGGTGACTGAGTTCAAGCACCCAAAAGGTCAAAGGACAGAACAGATTCCGCAAAGTTGGCCTTTGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR CAA 72 bp | GTGCCATGGCTTGTATGTGGTGGTCAAAGGCCAACTTaGCGGAATCTGTTCTGTCCTTTGACCTTTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPWLVCGGQRPT*RNLFCPLTFWV Trigger: CACCCAAAAGGTCAAAGGACAGAACAGATTCCGCAAAGTTGGCCTTTGACCACCACATACAAGCCATGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR CAA 72 bp | TGCCGTGGGATAGAGTGGAAGTATTGTCCATTGAGATaGGAATGGCTACAGGTACCAAACCACCAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: CRGIEWKYCPLR*EWLQVPNHQPP Trigger: TGGTGGCTGGTGGTTTGGTACCTGTAGCCATTCCAATCTCAATGGACAATACTTCCACTCTATCCCACGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| 3UTR CAA 72 bp | TGCCGTTGCCGTGGGATAGAGTGGAAGTATTGTCCATaGAGATTGGAATGGCTACAGGTACCAAACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRCRGIEWKYCP*RLEWLQVPNHQ Trigger: CTGGTGGTTTGGTACCTGTAGCCATTCCAATCTCAATGGACAATACTTCCACTCTATCCCACGGCAACGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| CDS-3UTR TCA 90 bp | CCATGTTTTCTGGATCTGGGCCATTTGTTTCCTGTTGCTCTGACTGTTTCAGACTGGGAGTCAAGCCAATaGGCTGGGTCATCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PCFLDLGHLFPVALTVSDWESSQ*AGSSWE Trigger: TTCCCAAGATGACCCAGCTCATTGGCTTGACTCCCA...GTCTGAAACAGTCAGAGCAACAGGAAACAAATGGCCCAGATCCAGAAAACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR GCA 90 bp | TTTGTTTCCTGTTGCTCTGACTGTTTCAGACAACAATGCTTGCAGACCCCAACAACTCCATTGTCTAGGTaGGTGGGGGCCAAGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVSCCSDCFRQQCLQTPTTPLSR*VGAKRS Trigger: AGACCTCTTGGCCCCCACGCACCTAGACAATGGAGT...TGTTGGGGTCTGCAAGCATTGTTGTCTGAAACAGTCAGAGCAACAGGAAACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR CAA 72 bp | TGTTTTCCAGAAGATACCCTTTTTACGCTCCTGCCGTaGCCGTGGGATAGAGTGGAAGTATTGTCCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CFPEDTLFTLLP*PWDRVEVLSIE Trigger: CTCAATGGACAATACTTCCACTCTATCCCACGGCAACGGCAGGAGCGTAAAAAGGGTATCTTCTGGAAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGTTACGGGCTTCTTCTTTGTCCACAAGACGCAGATAGCCCTACTTAGAAGGTCTATCTGGCTCTaGAGATTCTGTATTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPVTGFFFVHKTQIALLRRSIWL*RFCILR Trigger: TCTGAGAATACAGAATCTTCAGAGCCAGATAGACCT...TCTAAGTAGGGCTATCTGCGTCTTGTGGACAAAGAAGAAGCCCGTAACTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CCA 90 bp | AACAATTATTGTGTATATATCTGTGTGACAGCCCAAGTGCCATGGCTTGTATGTTTGCCATCCCAGTCCTaGAGCTGCACAGCCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: NNYCVYICVTAQVPWLVCLPSQS*SCTANW Trigger: CCAATTGGCTGTGCAGCTCCAGGACTGGGATGGCAA...ACATACAAGCCATGGCACTTGGGCTGTCACACAGATATATACACAATAATTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR TCA 90 bp | CCATCTCCCTGGACCTGTTTTGAGATTTTGAAATATAAACAAGAGAGGCTCACATTCCTCGGTTCCCTGTaGTGCTGTGCATCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPWTCFEILKYKQERLTFLGSL*CCASFP Trigger: TGGAAAAGATGCACAGCATCACAGGGAACCGAGGAA...TGTGAGCCTCTCTTGTTTATATTTCAAAATCTCAAAACAGGTCCAGGGAGATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| 3UTR CAA 72 bp | GTACCCCACCGAGTACTGATCAGAAAGACTTTTTACTaGTCTCTATCACCAACTTCCCTAATGATTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VPHRVLIRKTFY*SLSPTSLMIGL Trigger: CAGTCCAATCATTAGGGAAGTTGGTGATAGAGACAAGTAAAAAGTCTTTCTGATCAGTACTCGGTGGGGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CCA 90 bp | CCCCACCGAGTACTGATCAGAAAGACTTTTTACTTGTCTCTATCACCAACTTCCAAATGGATGGGAAATTaGAGCAATTTGGCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHRVLIRKTFYLSLSPTSKWMGN*SNLALP Trigger: TGGCAATGCCAAATTGCTCCAATTTCCCATCCATTT...GGAAGTTGGTGATAGAGACAAGTAAAAAGTCTTTCTGATCAGTACTCGGTGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CCA 90 bp | CCATCTCCCTGGACCTGTTTTGAGATTTTGAAATATAAACAAGAGAGGCTCACACCATTGAGATTGGAATaGCTACAGGTACCAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSPWTCFEILKYKQERLTPLRLE*LQVPNH Trigger: GTGGTTTGGTACCTGTAGCCATTCCAATCTCAATGG...TGTGAGCCTCTCTTGTTTATATTTCAAAATCTCAAAACAGGTCCAGGGAGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR GCA 90 bp | TTTGTTTCCTGTTGCTCTGACTGTTTCAGACAACAATGCTTGCAGACCCCAACATGTATTCTCAGATTCTaGTTTGATAGGTATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FVSCCSDCFRQQCLQTPTCILRF*FDRYLC Trigger: GCAGAGATACCTATCAAAGCAGAATCTGAGAATACA...TGTTGGGGTCTGCAAGCATTGTTGTCTGAAACAGTCAGAGCAACAGGAAACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| 3UTR CAA 72 bp | GGATCTGGGAATACGATGTCCGAGGAACATGTTTACTaGAACTTTGAAACTATTCACTTTGAAAAATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSGNTMSEEHVY*NFETIHFEKSN Trigger: ATTTGATTTTTCAAAGTGAATAGTTTCAAAGTTCAAGTAAACATGTTCCTCGGACATCGTATTCCCAGATCC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS GCA 90 bp | CACAGGCAGCCATGCGGCGCTCCAGCGCGCCCAGCTGCCCACGGGTaGGCTCCACGTGTTCGCGCAGCCCATGGCCGAGCTGTAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: HRQPCGAPARPAAHG*APRVRAAHGRAVAA Trigger: GGCTGCTACAGCTCGGCCATGGGCTGCGCGAACACGTGGAGCGCACCCGTGGGCAGCTGGGCGCGCTGGAGCGCCGCATGGCTGCCTGTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| CDS GCA 90 bp | CAAGCGTTACCACAGGCAGCCATGCGGCGCTCCAGCGCGCCCAGCTaGCCACGGGTGCGCTCCACGTGTTCGCGCAGCCCATGGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QALPQAAMRRSSAPS*PRVRSTCSRSPWPS Trigger: GCTCGGCCATGGGCTGCGCGAACACGTGGAGCGCACCCGTGGGCAGCTGGGCGCGCTGGAGCGCCGCATGGCTGCCTGTGGTAACGCTTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| CDS GCA 90 bp | TCCCAGGATGCAAAGCGCGGTGGCTCTGGCTGTGCAGGGCGCCCTTaGGCGCTCAAAAGCCCCGCAGTAGCCGCGCATAGCACCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SQDAKRGGSGCAGRP*ALKSPAVAAHSTRA Trigger: TGCCCTGGTGCTATGCGCGGCTACTGCGGGGCTTTTGAGCGCGCAAGGGCGCCCTGCACAGCCAGAGCCACCGCGCTTTGCATCCTGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS GCA 90 bp | CATCTTTTCCCTTGGGCCCCTGACAAGCGTTACCACAGGCAGCCATaGGGCGCTCCAGCGCGCCCAGCTGCCCACGGGTGCGCTCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: HLFPWAPDKRYHRQP*GAPARPAAHGCAPR Trigger: ACGTGGAGCGCACCCGTGGGCAGCTGGGCGCGCTGGAGCGCCGCATGGCTGCCTGTGGTAACGCTTGTCAGGGGCCCAAGGGAAAAGATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS CCA 90 bp | CCCGTGAGCCAGCAAGTTCATCTCGTCCCAGGATGCAAAGCGCGGTaGCTCTGGCTGTGCAGGGCGCCCTTGCGCGCTCAAAAGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PVSQQVHLVPGCKAR*LWLCRAPLRAQKPR Trigger: GCGGGGCTTTTGAGCGCGCAAGGGCGCCCTGCACAGCCAGAGCCACCGCGCTTTGCATCCTGGGACGAGATGAACTTGCTGGCTCACGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS TCA 90 bp | CGCTCCACGTGTTCGCGCAGCCCATGGCCGAGCTGTAGCAGCCCGTaGGCCAGCAAGTTCATCTCGTCCCAGGATGCAAAGCGCGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSTCSRSPWPSCSSP*ASKFISSQDAKRGG Trigger: GCCACCGCGCTTTGCATCCTGGGACGAGATGAACTTGCTGGCTCACGGGCTGCTACAGCTCGGCCATGGGCTGCGCGAACACGTGGAGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS GCA 90 bp | CAAGTTCATCTCGTCCCAGGATGCAAAGCGCGGTGGCTCTGGCTGTaGAGGGCGCCCTTGCGCGCTCAAAAGCCCCGCAGTAGCCGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QVHLVPGCKARWLWL*RAPLRAQKPRSSRA Trigger: TGCGCGGCTACTGCGGGGCTTTTGAGCGCGCAAGGGCGCCCTGCACAGCCAGAGCCACCGCGCTTTGCATCCTGGGACGAGATGAACTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS CCA 90 bp | AGCCAGCAAGTTCATCTCGTCCCAGGATGCAAAGCGCGGTGGCTCTaGCTGTGCAGGGCGCCCTTGCGCGCTCAAAAGCCCCGCAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQQVHLVPGCKARWL*LCRAPLRAQKPRSS Trigger: GCTACTGCGGGGCTTTTGAGCGCGCAAGGGCGCCCTGCACAGCCAGAGCCACCGCGCTTTGCATCCTGGGACGAGATGAACTTGCTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS-3UTR CAA 90 bp | GTCAAGCCAATGAGCTGGGTCATCTTGGGAAGCCTCTTTCCCCTCGAAGTCTTGCTGTGCAGGGCGCCCTaGCGCGCTCAAAAGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VKPMSWVILGSLFPLEVLLCRAP*RAQKPR Trigger: GCGGGGCTTTTGAGCGCGCAAGGGCGCCCTGCACAG...CAAGACTTCGAGGGGAAAGAGGCTTCCCAAGATGACCCAGCTCATTGGCTTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| CDS-3UTR CAA 90 bp | CCAGGGCTCCTGGCACCCTGTCTCCAGTCAGTCAATATGACTGAGTCCGCCATTGGCAGGGAAAGGCCATaGGGGGAAACATTGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGLLAPCLQSVNMTESAIGRERP*GETLVA Trigger: TGCCACCAATGTTTCCCCCAATGGCCTTTCCCTGCC...AATGGCGGACTCAGTCATATTGACTGACTGGAGACAGGGTGCCAGGAGCCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| CDS-3UTR CAA 90 bp | GGCTTAGAGTTTGCAAAGCTCCTATGTCCAGCTCCCAGGGGCTGGAGATCTGTGCCACCAGAGAGGCTCTaGGCACAGTTAAGGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLEFAKLLCPAPRGWRSVPPERL*AQLRSP Trigger: TGGGGACCTTAACTGTGCCAAGAGCCTCTCTGGTGG...CACAGATCTCCAGCCCCTGGGAGCTGGACATAGGAGCTTTGCAAACTCTAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| CDS-3UTR CAA 90 bp | GTTGGGAGTCAAGCCAATGAGCTGGGTCATCTTGGGAAGCCTCTTTCCCCTCGACTATCCTCGGAGTCTTaGAAGGGTGCATCTTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGSQANELGHLGKPLSPRLSSES*KGASFP Trigger: GGGAAAAGATGCACCCTTCAAAGACTCCGAGGATAG...TCGAGGGGAAAGAGGCTTCCCAAGATGACCCAGCTCATTGGCTTGACTCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| CDS TCA 90 bp | GGGCCACCTTCTGGAACAATTGCTGGATCTTGCTGTTTTGAGCCTTaGGCTGAGTCTGCAAACTCTGCAGAGTCTCAGGAGTCTGGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPPSGTIAGSCCFEP*AESANSAESQESGL Trigger: AAGGCCAGACTCCTGAGACTCTGCAGAGTTTGCAGACTCAGCTCAAGGCTCAAAACAGCAAGATCCAGCAATTGTTCCAGAAGGTGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS-3UTR CAA 90 bp | AACAATTATTGTGTATATATCTGTGTGACAGCCCAAGTGCCATGGCTTGTATGTCTGTGCAGGGCGCCCTaGCGCGCTCAAAAGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: NNYCVYICVTAQVPWLVCLCRAP*RAQKPR Trigger: GCGGGGCTTTTGAGCGCGCAAGGGCGCCCTGCACAG...ACATACAAGCCATGGCACTTGGGCTGTCACACAGATATATACACAATAATTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CAA 90 bp | CCATGTTTTCTGGATCTGGGCCATTTGTTTCCTGTTGCTCTGACTGTTTCAGACGTGCCGCTCCCCTTCTaGGAAGAGTTCCTGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PCFLDLGHLFPVALTVSDVPLPF*EEFLAV Trigger: GACTGCCAGGAACTCTTCCAAGAAGGGGAGCGGCAC...GTCTGAAACAGTCAGAGCAACAGGAAACAAATGGCCCAGATCCAGAAAACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS CCA 90 bp | GCCTCTTTCCCCTCGAAGTCTTGTCTACTCCATTGTCTAGGTGCGTaGGGGCCAAGAGGTCTATCTGGCTCTGAAGATTCTGTATTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASFPSKSCLLHCLGA*GPRGLSGSEDSVFS Trigger: TGAGAATACAGAATCTTCAGAGCCAGATAGACCTCTTGGCCCCCACGCACCTAGACAATGGAGTAGACAAGACTTCGAGGGGAAAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| CDS-3UTR CAA 90 bp | GGTAATTCTGGTCCCCCTGCCTCAGCTCCCCAAGTGCTGAAATTACAAGTATGGCTATCCTCGGAGTCTTaGAAGGGTGCATCTTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GNSGPPASAPQVLKLQVWLSSES*KGASFP Trigger: GGGAAAAGATGCACCCTTCAAAGACTCCGAGGATAG...CCATACTTGTAATTTCAGCACTTGGGGAGCTGAGGCAGGGGGACCAGAATTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CAA 90 bp | GTGAGCTGTGCCTGGGAACCACAGTTAGCACCTGTGCATCCACAGCACCTACAAGATAGAGTGGAAGTATaGTCCATTGAGATTGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: VSCAWEPQLAPVHPQHLQDRVEV*SIEIGM Trigger: CATTCCAATCTCAATGGACAATACTTCCACTCTATC...TTGTAGGTGCTGTGGATGCACAGGTGCTAACTGTGGTTCCCAGGCACAGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CAA 90 bp | CCATCTCCCTGGACCTGTTTTGAGATTTTGAAATATAAACAAGAGAGGCTCACAGAGCTGCACAGCCAATaGGCTTCCTCGGTTCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSPWTCFEILKYKQERLTELHSQ*ASSVPC Trigger: ACAGGGAACCGAGGAAGCCAATTGGCTGTGCAGCTC...TGTGAGCCTCTCTTGTTTATATTTCAAAATCTCAAAACAGGTCCAGGGAGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CAA 90 bp | AAATATTTGCATATTATCACATTTGTACAGGAGCCAGTAGAGGTCAGAGGCGGCTGGAGCAATTTGGCATaGCCATCCCAGTCCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KYLHIITFVQEPVEVRGGWSNLA*PSQSWS Trigger: GCTCCAGGACTGGGATGGCAATGCCAAATTGCTCCA...GCCGCCTCTGACCTCTACTGGCTCCTGTACAAATGTGATAATATGCAAATATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CAA 90 bp | GAGCCCATGTTTTCTGGATCTGGGCCATTTGTTTCCTGTTGCTCTGACTGTTTCGAAGTCATCTCACAGTaGACCAAAAATGGTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: EPMFSGSGPFVSCCSDCFEVISQ*TKNGGD Trigger: GTCTCCACCATTTTTGGTCAACTGTGAGATGACTTC...GAAACAGTCAGAGCAACAGGAAACAAATGGCCCAGATCCAGAAAACATGGGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CAA 90 bp | AGGGTCTGTGCATGCTTCGTATGTCCAGTTGAGCTACATCTACAGTACTCACCCTATTGTCCATTGAGATaGGAATGGCTACAGGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: RVCACFVCPVELHLQYSPYCPLR*EWLQVP Trigger: TGGTACCTGTAGCCATTCCAATCTCAATGGACAATA...GGGTGAGTACTGTAGATGTAGCTCAACTGGACATACGAAGCATGCACAGACCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CAA 90 bp | TTTGTTTCCTGTTGCTCTGACTGTTTCAGACAACAATGCTTGCAGACCCCAACATTTCCCCTCGAAGTCTaGTCTACTCCATTGTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FVSCCSDCFRQQCLQTPTFPLEV*STPLSR Trigger: CCTAGACAATGGAGTAGACAAGACTTCGAGGGGAAA...TGTTGGGGTCTGCAAGCATTGTTGTCTGAAACAGTCAGAGCAACAGGAAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CAA 90 bp | TCACTGGGAAGGAATAGCCAACCAGTTCTGTCCTTAACGGATCTGGGAATACGATGGAAGTATTGTCCATaGAGATTGGAATGGCTACAG | + |
|
Preference number: 5 (lower is better) Translates to: SLGRNSQPVLSLTDLGIRWKYCP*RLEWLQ Trigger: CTGTAGCCATTCCAATCTCAATGGACAATACTTCCA...TCGTATTCCCAGATCCGTTAAGGACAGAACTGGTTGGCTATTCCTTCCCAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS-3UTR CAA 90 bp | AAATATTTGCATATTATCACATTTGTACAGGAGCCAGTAGAGGTCAGAGGCGGCCAAATGGATGGGAAATaGGAGCAATTTGGCATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KYLHIITFVQEPVEVRGGQMDGK*EQFGIA Trigger: GGCAATGCCAAATTGCTCCAATTTCCCATCCATTTG...GCCGCCTCTGACCTCTACTGGCTCCTGTACAAATGTGATAATATGCAAATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
||
| CDS GCA 72 bp | CCATGCGGCGCTCCAGCGCGCCCAGCTGCCCACGGGTaGGCTCCACGTGTTCGCGCAGCCCATGGCCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PCGAPARPAAHG*APRVRAAHGRA Trigger: AGCTCGGCCATGGGCTGCGCGAACACGTGGAGCGCACCCGTGGGCAGCTGGGCGCGCTGGAGCGCCGCATGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
||
| CDS GCA 72 bp | CCACAGGCAGCCATGCGGCGCTCCAGCGCGCCCAGCTaGCCACGGGTGCGCTCCACGTGTTCGCGCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PQAAMRRSSAPS*PRVRSTCSRSP Trigger: TGGGCTGCGCGAACACGTGGAGCGCACCCGTGGGCAGCTGGGCGCGCTGGAGCGCCGCATGGCTGCCTGTGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS GCA 72 bp | GCAAAGCGCGGTGGCTCTGGCTGTGCAGGGCGCCCTTaGGCGCTCAAAAGCCCCGCAGTAGCCGCGCATAGC | + |
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Preference number: 6 (lower is better) Translates to: AKRGGSGCAGRP*ALKSPAVAAHS Trigger: GCTATGCGCGGCTACTGCGGGGCTTTTGAGCGCGCAAGGGCGCCCTGCACAGCCAGAGCCACCGCGCTTTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS CCA 72 bp | GTTCATCTCGTCCCAGGATGCAAAGCGCGGTGGCTCTaGCTGTGCAGGGCGCCCTTGCGCGCTCAAAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: VHLVPGCKARWL*LCRAPLRAQKP Trigger: GGGCTTTTGAGCGCGCAAGGGCGCCCTGCACAGCCAGAGCCACCGCGCTTTGCATCCTGGGACGAGATGAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS CCA 72 bp | CAGCAAGTTCATCTCGTCCCAGGATGCAAAGCGCGGTaGCTCTGGCTGTGCAGGGCGCCCTTGCGCGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: QQVHLVPGCKAR*LWLCRAPLRAQ Trigger: TTGAGCGCGCAAGGGCGCCCTGCACAGCCAGAGCCACCGCGCTTTGCATCCTGGGACGAGATGAACTTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS TCA 72 bp | TGTTCGCGCAGCCCATGGCCGAGCTGTAGCAGCCCGTaGGCCAGCAAGTTCATCTCGTCCCAGGATGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: CSRSPWPSCSSP*ASKFISSQDAK Trigger: CTTTGCATCCTGGGACGAGATGAACTTGCTGGCTCACGGGCTGCTACAGCTCGGCCATGGGCTGCGCGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS GCA 72 bp | GCCTTCAGGGACTCTATCCTCGGAGTCTTTGAAGGGTaGATCTTTTCCCTTGGGCCCCTGACAAGCGTTACC | + |
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Preference number: 6 (lower is better) Translates to: AFRDSILGVFEG*IFSLGPLTSVT Trigger: GGTAACGCTTGTCAGGGGCCCAAGGGAAAAGATGCACCCTTCAAAGACTCCGAGGATAGAGTCCCTGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS CAA 72 bp | TGGGTCATCTTGGGAAGCCTCTTTCCCCTCGAAGTCTaGTCTACTCCATTGTCTAGGTGCGTGGGGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: WVILGSLFPLEV*STPLSRCVGAK Trigger: CTTGGCCCCCACGCACCTAGACAATGGAGTAGACAAGACTTCGAGGGGAAAGAGGCTTCCCAAGATGACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| CDS CCA 72 bp | CCCTCGAAGTCTTGTCTACTCCATTGTCTAGGTGCGTaGGGGCCAAGAGGTCTATCTGGCTCTGAAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: PSKSCLLHCLGA*GPRGLSGSEDS Trigger: AGAATCTTCAGAGCCAGATAGACCTCTTGGCCCCCACGCACCTAGACAATGGAGTAGACAAGACTTCGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| CDS CAA 90 bp | CTGCTGCTGGGCCACCTTCTGGAACAATTGCTGGATCTTGCTGTTTaGAGCCTTGAGCTGAGTCTGCAAACTCTGCAGAGTCTCAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LLLGHLLEQLLDLAV*SLELSLQTLQSLRS Trigger: ACTCCTGAGACTCTGCAGAGTTTGCAGACTCAGCTCAAGGCTCAAAACAGCAAGATCCAGCAATTGTTCCAGAAGGTGGCCCAGCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS TCA 72 bp | TCTGGAACAATTGCTGGATCTTGCTGTTTTGAGCCTTaGGCTGAGTCTGCAAACTCTGCAGAGTCTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SGTIAGSCCFEP*AESANSAESQE Trigger: CTCCTGAGACTCTGCAGAGTTTGCAGACTCAGCTCAAGGCTCAAAACAGCAAGATCCAGCAATTGTTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS TCA 72 bp | TCTAGGTGCGTGGGGGCCAAGAGGTCTATCTGGCTCTaGAGATTCTGTATTCTCAGATTCTGCTTTGATAGG | + |
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Preference number: 6 (lower is better) Translates to: SRCVGAKRSIWL*RFCILRFCFDR Trigger: CCTATCAAAGCAGAATCTGAGAATACAGAATCTTCAGAGCCAGATAGACCTCTTGGCCCCCACGCACCTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| CDS CAA 90 bp | GCCAAGAGGTCTGGCTCTGAAGATTCTGTATTCTCAGATTCTGCTTaGATAGGTATCTCTGCTGCTGGGCCACCTTCTGGAACAATTGCT | + |
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Preference number: 6 (lower is better) Translates to: AKRSGSEDSVFSDSA*IGISAAGPPSGTIA Trigger: AGCAATTGTTCCAGAAGGTGGCCCAGCAGCAGAGATACCTATCAAAGCAGAATCTGAGAATACAGAATCTTCAGAGCCAGACCTCTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173869.8 |
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| CDS CAA 72 bp | TCTGGCTCTGAAGATTCTGTATTCTCAGATTCTGCTTaGATAGGTATCTCTGCTGCTGGGCCACCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SGSEDSVFSDSA*IGISAAGPPSG Trigger: TCCAGAAGGTGGCCCAGCAGCAGAGATACCTATCAAAGCAGAATCTGAGAATACAGAATCTTCAGAGCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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| CDS CAA 90 bp | AGAGGTCTATCTGGCTCTGAAGATTCTGTATTCTCAGATTCTGCTTaGATAGGTATCTCTGCTGCTGGGCCACCTTCTGGAACAATTGCT | + |
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Preference number: 6 (lower is better) Translates to: RGLSGSEDSVFSDSA*IGISAAGPPSGTIA Trigger: AGCAATTGTTCCAGAAGGTGGCCCAGCAGCAGAGATACCTATCAAAGCAGAATCTGAGAATACAGAATCTTCAGAGCCAGATAGACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002360.17 |
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| CDS GCA 72 bp | TTCTGTATTCTCAGATTCTGCTTTGATAGGTATCTCTaGTGCTGGGCCACCTTCTGGAACAATTGCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: FCILRFCFDRYL*CWATFWNNCWI Trigger: GATCCAGCAATTGTTCCAGAAGGTGGCCCAGCAGCAGAGATACCTATCAAAGCAGAATCTGAGAATACAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002360.17 ENSMUST00000173869.8 |
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