Pregenerated sensors for ANGPTL3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028553

Ensembl transcript IDs: ENSMUST00000030280.7

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TGCCAGCAATCTCAGCCACATGTAGCGTGTAGTTGGTTTCGTGACTaGCCAGGTGAAAGGAGTATTCAACGTAGTGCTTGCTGTCTTTCC	+
Preference number: 5 (lower is better) Translates to: CQQSQPHVACSWFRD*PGERSIQRSACCLS Trigger: GGAAAGACAGCAAGCACTACGTTGAATACTCCTTTCACCTGGGCAGTCACGAAACCAACTACACGCTACATGTGGCTGAGATTGCTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS GCA 90 bp	TACTGTTCTTCCACACTCTGGAGGAGTTCTCTTATGCTGTTGTCTTaGTGTTCTACAAAACTTTTGAGTGATGTTACTTCTGGGTGCTCC	+
Preference number: 5 (lower is better) Translates to: YCSSTLWRSSLMLLS*CSTKLLSDVTSGCS Trigger: GGAGCACCCAGAAGTAACATCACTCAAAAGTTTTGTAGAACAGCAAGACAACAGCATAAGAGAACTCCTCCAGAGTGTGGAAGAACAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS GCA 72 bp	TCAGGTCTGTGTGCTCTGGGAGGGCCCCAGGGATATTaGCAGCAATCTCAGCCACATGTAGCGTGTAGTTGG	+
Preference number: 6 (lower is better) Translates to: SGLCALGGPQGY*QQSQPHVACSW Trigger: CCAACTACACGCTACATGTGGCTGAGATTGCTGGCAATATCCCTGGGGCCCTCCCAGAGCACACAGACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS TCA 72 bp	TTGGTTAGCTGCTCCTCCAAAGCCCTGACCTTGTGTTaGAGGGCTGTCTTCTCTTCCAGCAGACTCTCAAGC	+
Preference number: 6 (lower is better) Translates to: LVSCSSKALTLC*RAVFSSSRLSS Trigger: GCTTGAGAGTCTGCTGGAAGAGAAGACAGCCCTTCAACACAAGGTCAGGGCTTTGGAGGAGCAGCTAACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS CCA 72 bp	GTGATTCCATGTAGAAAACATCAGGTCTGTGTGCTCTaGGAGGGCCCCAGGGATATTGCCAGCAATCTCAGC	+
Preference number: 6 (lower is better) Translates to: VIPCRKHQVCVL*EGPRDIASNLS Trigger: GCTGAGATTGCTGGCAATATCCCTGGGGCCCTCCCAGAGCACACAGACCTGATGTTTTCTACATGGAATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS GCA 72 bp	TCTCAGCCACATGTAGCGTGTAGTTGGTTTCGTGACTaGCCAGGTGAAAGGAGTATTCAACGTAGTGCTTGC	+
Preference number: 6 (lower is better) Translates to: SQPHVACSWFRD*PGERSIQRSAC Trigger: GCAAGCACTACGTTGAATACTCCTTTCACCTGGGCAGTCACGAAACCAACTACACGCTACATGTGGCTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS TCA 72 bp	GTTTTCTCCACATATGTCATTCCACCACCAGCCACCTaGGTAACTTTCTGGACAGTAGAGCTGTCCCTTTGC	+
Preference number: 6 (lower is better) Translates to: VFSTYVIPPPAT*VTFWTVELSLC Trigger: GCAAAGGGACAGCTCTACTGTCCAGAAAGTTACTCAGGTGGCTGGTGGTGGAATGACATATGTGGAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS CAA 90 bp	TTCGCCTCTGTTATAAACGGCAGAGCAGTCGGCAGGAAGGTCATCTaGTTCTGTATTTTCTGTTTCGTTCAGTTGAAGAGGGGGAGTAGT	+
Preference number: 6 (lower is better) Translates to: FASVINGRAVGRKVI*FCIFCFVQLKRGSS Trigger: ACTACTCCCCCTCTTCAACTGAACGAAACAGAAAATACAGAACAAGATGACCTTCCTGCCGACTGCTCTGCCGTTTATAACAGAGGCGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS TCA 72 bp	TTAGAATTAAGTTGGTTAGCTGCTCCTCCAAAGCCCTaGCCTTGTGTTGAAGGGCTGTCTTCTCTTCCAGCA	+
Preference number: 6 (lower is better) Translates to: LELSWLAAPPKP*PCVEGLSSLPA Trigger: TGCTGGAAGAGAAGACAGCCCTTCAACACAAGGTCAGGGCTTTGGAGGAGCAGCTAACCAACTTAATTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS GCA 72 bp	GACTGCCCAGGTGAAAGGAGTATTCAACGTAGTGCTTaGTGTCTTTCCAGTCTTGTAGCTCGAGTCGTAAAA	+
Preference number: 6 (lower is better) Translates to: DCPGERSIQRSA*CLSSLVARVVK Trigger: TTTTACGACTCGAGCTACAAGACTGGAAAGACAGCAAGCACTACGTTGAATACTCCTTTCACCTGGGCAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS CAA 72 bp	GAAGGGCTGTCTTCTCTTCCAGCAGACTCTCAAGCTTaGAGTTCAGTTCTACTGACATGTTCTTCACCTCCT	+
Preference number: 6 (lower is better) Translates to: EGLSSLPADSQA*SSVLLTCSSPP Trigger: AGGAGGTGAAGAACATGTCAGTAGAACTGAACTCAAAGCTTGAGAGTCTGCTGGAAGAGAAGACAGCCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS TCA 72 bp	TCCCAAAGCCCTTTTCGTAGTTTTCCCATGTTTCGTTaGAGTCCTGTGAGCCATCTTTCCGGTGTTGAATTA	+
Preference number: 6 (lower is better) Translates to: SQSPFRSFPMFR*SPVSHLSGVEL Trigger: TAATTCAACACCGGAAAGATGGCTCACAGGACTTCAACGAAACATGGGAAAACTACGAAAAGGGCTTTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS CAA 90 bp	TGTTTATACTGTTCTTCCACACTCTGGAGGAGTTCTCTTATGCTGTaGTCTTGCTGTTCTACAAAACTTTTGAGTGATGTTACTTCTGGG	+
Preference number: 6 (lower is better) Translates to: CLYCSSTLWRSSLML*SCCSTKLLSDVTSG Trigger: CCCAGAAGTAACATCACTCAAAAGTTTTGTAGAACAGCAAGACAACAGCATAAGAGAACTCCTCCAGAGTGTGGAAGAACAGTATAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS GCA 72 bp	TCCACACTCTGGAGGAGTTCTCTTATGCTGTTGTCTTaGTGTTCTACAAAACTTTTGAGTGATGTTACTTCT	+
Preference number: 6 (lower is better) Translates to: STLWRSSLMLLS*CSTKLLSDVTS Trigger: AGAAGTAACATCACTCAAAAGTTTTGTAGAACAGCAAGACAACAGCATAAGAGAACTCCTCCAGAGTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030280.7
CDS CAA 72 bp	TGTTCTTCCACACTCTGGAGGAGTTCTCTTATGCTGTaGTCTTGCTGTTCTACAAAACTTTTGAGTGATGTT	+
Preference number: 6 (lower is better) Translates to: CSSTLWRSSLML*SCCSTKLLSDV Trigger: AACATCACTCAAAAGTTTTGTAGAACAGCAAGACAACAGCATAAGAGAACTCCTCCAGAGTGTGGAAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030280.7