Pregenerated sensors for ANGPTL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033544Ensembl transcript IDs: ENSMUST00000027885.8, ENSMUST00000111720.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGTCCCTCTGTATCTCATTGCCTCCCAGCAGACCAGGGGTGTACTaGTGGCTGTTAGGACTGTGTCGCGGTACCACCTGGACAAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GSLCISLPPSRPGVY*WLLGLCRGTTWTRG Trigger: CCCTCTTGTCCAGGTGGTACCGCGACACAGTCCTAACAGCCACCAGTACACCCCTGGTCTGCTGGGAGGCAATGAGATACAGAGGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 90 bp | TCCCTCTGTATCTCATTGCCTCCCAGCAGACCAGGGGTGTACTGGTaGCTGTTAGGACTGTGTCGCGGTACCACCTGGACAAGAGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: SLCISLPPSRPGVYW*LLGLCRGTTWTRGG Trigger: TCCCCCTCTTGTCCAGGTGGTACCGCGACACAGTCCTAACAGCCACCAGTACACCCCTGGTCTGCTGGGAGGCAATGAGATACAGAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS GCA 90 bp | CCGTCCACATCTACCACCAGCTGCAGGACATCTATCTCCCGCTTCTaGCTAGACAGCACATCCTTGAGGTTCTCCAGGTCCATCCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: PSTSTTSCRTSISRF*LDSTSLRFSRSILV Trigger: CACCAGGATGGACCTGGAGAACCTCAAGGATGTGCTGTCTAGGCAGAAGCGGGAGATAGATGTCCTGCAGCTGGTGGTAGATGTGGACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 90 bp | AGCTGTTGGCAGATCAGGTGGTGGCATTACGTCTCTGGGGTAACCTaGGTCCCTCTGTATCTCATTGCCTCCCAGCAGACCAGGGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: SCWQIRWWHYVSGVT*VPLYLIASQQTRGV Trigger: TACACCCCTGGTCTGCTGGGAGGCAATGAGATACAGAGGGACCCAGGTTACCCCAGAGACGTAATGCCACCACCTGATCTGCCAACAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 90 bp | TTTTCGTGGGAGCTGTTGGCAGATCAGGTGGTGGCATTACGTCTCTaGGGTAACCTGGGTCCCTCTGTATCTCATTGCCTCCCAGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: FSWELLADQVVALRL*GNLGPSVSHCLPAD Trigger: GTCTGCTGGGAGGCAATGAGATACAGAGGGACCCAGGTTACCCCAGAGACGTAATGCCACCACCTGATCTGCCAACAGCTCCCACGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 90 bp | TGGAATCTTGAAAGGGCTTTTCGTGGGAGCTGTTGGCAGATCAGGTaGTGGCATTACGTCTCTGGGGTAACCTGGGTCCCTCTGTATCTC | + |
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Preference number: 5 (lower is better) Translates to: WNLERAFRGSCWQIR*WHYVSGVTWVPLYL Trigger: GAGATACAGAGGGACCCAGGTTACCCCAGAGACGTAATGCCACCACCTGATCTGCCAACAGCTCCCACGAAAAGCCCTTTCAAGATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 90 bp | GAAAGTCACTGCTGGAATCTTGAAAGGGCTTTTCGTGGGAGCTGTTaGCAGATCAGGTGGTGGCATTACGTCTCTGGGGTAACCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: ESHCWNLERAFRGSC*QIRWWHYVSGVTWV Trigger: GACCCAGGTTACCCCAGAGACGTAATGCCACCACCTGATCTGCCAACAGCTCCCACGAAAAGCCCTTTCAAGATTCCAGCAGTGACTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS GCA 90 bp | CCAGGCGCAGTCTGTAGTAGTCACTTTCGGGCTCCAGACGAAAGCTaGTGTATTCTGCATAGACCTTCTTCTCGCTCCAGTCTTCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: PGAVCSSHFRAPDES*CILHRPSSRSSLLV Trigger: AACTAGAAGACTGGAGCGAGAAGAAGGTCTATGCAGAATACAGCAGCTTTCGTCTGGAGCCCGAAAGTGACTACTACAGACTGCGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027885.8 |
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| CDS GCA 90 bp | CTGCCCTCAAGGAGTAGGACCCGCCTCTGTATTCAGCCCAGAAAATaGCATCTTGGTGCTTGCTTCTGTAATGACCACCTCTGTACCATA | + |
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Preference number: 5 (lower is better) Translates to: LPSRSRTRLCIQPRK*HLGACFCNDHLCTI Trigger: TATGGTACAGAGGTGGTCATTACAGAAGCAAGCACCAAGATGGCATTTTCTGGGCTGAATACAGAGGCGGGTCCTACTCCTTGAGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027885.8 |
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| CDS CCA 90 bp | AATCTTGAAAGGGCTTTTCGTGGGAGCTGTTGGCAGATCAGGTGGTaGCATTACGTCTCTGGGGTAACCTGGGTCCCTCTGTATCTCATT | + |
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Preference number: 5 (lower is better) Translates to: NLERAFRGSCWQIRW*HYVSGVTWVPLYLI Trigger: AATGAGATACAGAGGGACCCAGGTTACCCCAGAGACGTAATGCCACCACCTGATCTGCCAACAGCTCCCACGAAAAGCCCTTTCAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS GCA 90 bp | GAGGTTCTCCAGGTCCATCCTGGTGATCATGTCCTTAATAGTGCCTaGATCCTGACCTTTGGTGTTGACACAGATTGGCCCTGTTATTTT | + |
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Preference number: 5 (lower is better) Translates to: EVLQVHPGDHVLNSA*ILTFGVDTDWPCYF Trigger: AAAATAACAGGGCCAATCTGTGTCAACACCAAAGGTCAGGATGCAGGCACTATTAAGGACATGATCACCAGGATGGACCTGGAGAACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 90 bp | AACATCCTCAGGCACTGCTCTTCCAATACAGTGATCGTCACAGACTaGTTATTGACAAGATCCGTCAAGGACGCATACTTCACCTCTAGC | + |
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Preference number: 5 (lower is better) Translates to: NILRHCSSNTVIVTD*LLTRSVKDAYFTSS Trigger: GCTAGAGGTGAAGTATGCGTCCTTGACGGATCTTGTCAATAACCAGTCTGTGACGATCACTGTATTGGAAGAGCAGTGCCTGAGGATGTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 90 bp | TTGCGTGAATCATACAGCATCAGCATACCAGCTTCGTTCTTCCATTaGCCAGGAAGCAGTAACTCACCTTCATTGATGAAAGTCACTGCT | + |
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Preference number: 5 (lower is better) Translates to: LRESYSISIPASFFH*PGSSNSPSLMKVTA Trigger: AGCAGTGACTTTCATCAATGAAGGTGAGTTACTGCTTCCTGGCCAATGGAAGAACGAAGCTGGTATGCTGATGCTGTATGATTCACGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111720.2 |
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| CDS CCA 72 bp | TACTGGTGGCTGTTAGGACTGTGTCGCGGTACCACCTaGACAAGAGGGGGAGACGCGTGGGGGTCTTGTCGG | + |
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Preference number: 6 (lower is better) Translates to: YWWLLGLCRGTT*TRGGDAWGSCR Trigger: CCGACAAGACCCCCACGCGTCTCCCCCTCTTGTCCAGGTGGTACCGCGACACAGTCCTAACAGCCACCAGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS GCA 72 bp | CGTCTCTGGGGTAACCTGGGTCCCTCTGTATCTCATTaGCTCCCAGCAGACCAGGGGTGTACTGGTGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RLWGNLGPSVSH*LPADQGCTGGC Trigger: ACAGCCACCAGTACACCCCTGGTCTGCTGGGAGGCAATGAGATACAGAGGGACCCAGGTTACCCCAGAGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 72 bp | ATCTCATTGCCTCCCAGCAGACCAGGGGTGTACTGGTaGCTGTTAGGACTGTGTCGCGGTACCACCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: ISLPPSRPGVYW*LLGLCRGTTWT Trigger: TGTCCAGGTGGTACCGCGACACAGTCCTAACAGCCACCAGTACACCCCTGGTCTGCTGGGAGGCAATGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 72 bp | TGTATCTCATTGCCTCCCAGCAGACCAGGGGTGTACTaGTGGCTGTTAGGACTGTGTCGCGGTACCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: CISLPPSRPGVY*WLLGLCRGTTW Trigger: CCAGGTGGTACCGCGACACAGTCCTAACAGCCACCAGTACACCCCTGGTCTGCTGGGAGGCAATGAGATACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 72 bp | AGGGCTTTTCGTGGGAGCTGTTGGCAGATCAGGTGGTaGCATTACGTCTCTGGGGTAACCTGGGTCCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RAFRGSCWQIRW*HYVSGVTWVPL Trigger: CAGAGGGACCCAGGTTACCCCAGAGACGTAATGCCACCACCTGATCTGCCAACAGCTCCCACGAAAAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 72 bp | CAGATCAGGTGGTGGCATTACGTCTCTGGGGTAACCTaGGTCCCTCTGTATCTCATTGCCTCCCAGCAGACC | + |
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Preference number: 6 (lower is better) Translates to: QIRWWHYVSGVT*VPLYLIASQQT Trigger: GGTCTGCTGGGAGGCAATGAGATACAGAGGGACCCAGGTTACCCCAGAGACGTAATGCCACCACCTGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 72 bp | GAAAGGGCTTTTCGTGGGAGCTGTTGGCAGATCAGGTaGTGGCATTACGTCTCTGGGGTAACCTGGGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: ERAFRGSCWQIR*WHYVSGVTWVP Trigger: AGGGACCCAGGTTACCCCAGAGACGTAATGCCACCACCTGATCTGCCAACAGCTCCCACGAAAAGCCCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 72 bp | GAGCTGTTGGCAGATCAGGTGGTGGCATTACGTCTCTaGGGTAACCTGGGTCCCTCTGTATCTCATTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: ELLADQVVALRL*GNLGPSVSHCL Trigger: GAGGCAATGAGATACAGAGGGACCCAGGTTACCCCAGAGACGTAATGCCACCACCTGATCTGCCAACAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS GCA 72 bp | TCGTTTACAATGTTCCCGTCCACATCTACCACCAGCTaGAGGACATCTATCTCCCGCTTCTGCCTAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: SFTMFPSTSTTS*RTSISRFCLDS Trigger: GCTGTCTAGGCAGAAGCGGGAGATAGATGTCCTGCAGCTGGTGGTAGATGTGGACGGGAACATTGTAAACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS GCA 72 bp | GCGTGGGGGTCTTGTCGGGAAAACATCCTCAGGCACTaGTCTTCCAATACAGTGATCGTCACAGACTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: AWGSCRENILRH*SSNTVIVTDWL Trigger: TAACCAGTCTGTGACGATCACTGTATTGGAAGAGCAGTGCCTGAGGATGTTTTCCCGACAAGACCCCCACGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CCA 72 bp | TGCTGGAATCTTGAAAGGGCTTTTCGTGGGAGCTGTTaGCAGATCAGGTGGTGGCATTACGTCTCTGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: CWNLERAFRGSC*QIRWWHYVSGV Trigger: TACCCCAGAGACGTAATGCCACCACCTGATCTGCCAACAGCTCCCACGAAAAGCCCTTTCAAGATTCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CAA 90 bp | AGCTGCAGGACATCTATCTCCCGCTTCTGCCTAGACAGCACATCCTaGAGGTTCTCCAGGTCCATCCTGGTGATCATGTCCTTAATAGTG | + |
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Preference number: 6 (lower is better) Translates to: SCRTSISRFCLDSTS*RFSRSILVIMSLIV Trigger: CACTATTAAGGACATGATCACCAGGATGGACCTGGAGAACCTCAAGGATGTGCTGTCTAGGCAGAAGCGGGAGATAGATGTCCTGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS GCA 72 bp | CAGGTCCATCCTGGTGATCATGTCCTTAATAGTGCCTaGATCCTGACCTTTGGTGTTGACACAGATTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: QVHPGDHVLNSA*ILTFGVDTDWP Trigger: GGGCCAATCTGTGTCAACACCAAAGGTCAGGATGCAGGCACTATTAAGGACATGATCACCAGGATGGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS GCA 72 bp | AGGAGTAGGACCCGCCTCTGTATTCAGCCCAGAAAATaGCATCTTGGTGCTTGCTTCTGTAATGACCACCTC | + |
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Preference number: 6 (lower is better) Translates to: RSRTRLCIQPRK*HLGACFCNDHL Trigger: GAGGTGGTCATTACAGAAGCAAGCACCAAGATGGCATTTTCTGGGCTGAATACAGAGGCGGGTCCTACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027885.8 |
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| CDS CAA 90 bp | CTCAGGCACTGCTCTTCCAATACAGTGATCGTCACAGACTGGTTATaGACAAGATCCGTCAAGGACGCATACTTCACCTCTAGCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LRHCSSNTVIVTDWL*TRSVKDAYFTSSSL Trigger: CAGGGAGCTAGAGGTGAAGTATGCGTCCTTGACGGATCTTGTCAATAACCAGTCTGTGACGATCACTGTATTGGAAGAGCAGTGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CAA 90 bp | CAAGGAGTAGGACCCGCCTCTGTATTCAGCCCAGAAAATGCCATCTaGGTGCTTGCTTCTGTAATGACCACCTCTGTACCATACTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: QGVGPASVFSPENAI*VLASVMTTSVPYSV Trigger: AACGGAGTATGGTACAGAGGTGGTCATTACAGAAGCAAGCACCAAGATGGCATTTTCTGGGCTGAATACAGAGGCGGGTCCTACTCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027885.8 |
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| CDS CAA 90 bp | GGAAGCAGTAACTCACCTTCATTGATGAAAGTCACTGCTGGAATCTaGAAAGGGCTTTTCGTGGGAGCTGTTGGCAGATCAGGTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GSSNSPSLMKVTAGI*KGLFVGAVGRSGGG Trigger: GCCACCACCTGATCTGCCAACAGCTCCCACGAAAAGCCCTTTCAAGATTCCAGCAGTGACTTTCATCAATGAAGGTGAGTTACTGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111720.2 |
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| CDS GCA 72 bp | GTCTGTAGTAGTCACTTTCGGGCTCCAGACGAAAGCTaGTGTATTCTGCATAGACCTTCTTCTCGCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: VCSSHFRAPDES*CILHRPSSRSS Trigger: ACTGGAGCGAGAAGAAGGTCTATGCAGAATACAGCAGCTTTCGTCTGGAGCCCGAAAGTGACTACTACAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027885.8 |
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| CDS CAA 90 bp | CAGTCTTTGAATGGTCCTTCATTGATGAAAGTCACTGCTGGAATCTaGAAAGGGCTTTTCGTGGGAGCTGTTGGCAGATCAGGTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: QSLNGPSLMKVTAGI*KGLFVGAVGRSGGG Trigger: GCCACCACCTGATCTGCCAACAGCTCCCACGAAAAGCCCTTTCAAGATTCCAGCAGTGACTTTCATCAATGAAGGACCATTCAAAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027885.8 |
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| CDS CAA 90 bp | CCAGCTTCGTTCTTCCATTGGCCAGGAAGCAGTAACTCACCTTCATaGATGAAAGTCACTGCTGGAATCTTGAAAGGGCTTTTCGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: PASFFHWPGSSNSPS*MKVTAGILKGLFVG Trigger: TCCCACGAAAAGCCCTTTCAAGATTCCAGCAGTGACTTTCATCAATGAAGGTGAGTTACTGCTTCCTGGCCAATGGAAGAACGAAGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111720.2 |
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| CDS GCA 72 bp | CTCTGTATTCAGCCCAGAAAATGCCATCTTGGTGCTTaGTTCTGTAATGACCACCTCTGTACCATACTCCGT | + |
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Preference number: 6 (lower is better) Translates to: LCIQPRKCHLGA*FCNDHLCTILR Trigger: ACGGAGTATGGTACAGAGGTGGTCATTACAGAAGCAAGCACCAAGATGGCATTTTCTGGGCTGAATACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027885.8 |
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| CDS CCA 72 bp | AGGCACTGCTCTTCCAATACAGTGATCGTCACAGACTaGTTATTGACAAGATCCGTCAAGGACGCATACTTC | + |
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Preference number: 6 (lower is better) Translates to: RHCSSNTVIVTD*LLTRSVKDAYF Trigger: GAAGTATGCGTCCTTGACGGATCTTGTCAATAACCAGTCTGTGACGATCACTGTATTGGAAGAGCAGTGCCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS TCA 72 bp | ATCCTGGTGATCATGTCCTTAATAGTGCCTGCATCCTaGCCTTTGGTGTTGACACAGATTGGCCCTGTTATT | + |
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Preference number: 6 (lower is better) Translates to: ILVIMSLIVPAS*PLVLTQIGPVI Trigger: AATAACAGGGCCAATCTGTGTCAACACCAAAGGTCAGGATGCAGGCACTATTAAGGACATGATCACCAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS GCA 72 bp | CAACCCCCAGGATCCAAACTGTTCTCACACCATAACTaGATCAGACCGTTGCTGTTTTCAGGTTTAATCATG | + |
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Preference number: 6 (lower is better) Translates to: QPPGSKLFSHHN*IRPLLFSGLIM Trigger: CATGATTAAACCTGAAAACAGCAACGGTCTGATGCAGTTATGGTGTGAGAACAGTTTGGATCCTGGGGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027885.8 |
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| CDS CAA 72 bp | AATGGTCCTTCATTGATGAAAGTCACTGCTGGAATCTaGAAAGGGCTTTTCGTGGGAGCTGTTGGCAGATCA | + |
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Preference number: 6 (lower is better) Translates to: NGPSLMKVTAGI*KGLFVGAVGRS Trigger: TGATCTGCCAACAGCTCCCACGAAAAGCCCTTTCAAGATTCCAGCAGTGACTTTCATCAATGAAGGACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027885.8 |
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| CDS CAA 72 bp | AACTCACCTTCATTGATGAAAGTCACTGCTGGAATCTaGAAAGGGCTTTTCGTGGGAGCTGTTGGCAGATCA | + |
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Preference number: 6 (lower is better) Translates to: NSPSLMKVTAGI*KGLFVGAVGRS Trigger: TGATCTGCCAACAGCTCCCACGAAAAGCCCTTTCAAGATTCCAGCAGTGACTTTCATCAATGAAGGTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111720.2 |
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| CDS CAA 90 bp | AGCTCCCTGTACCTTGTTGCCATCTTCAGCATTTCTGTGGTGACATaGAGGATTTTGTTTTCCAGCTGGGAAAGTTCGAGTGAATTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SSLYLVAIFSISVVT*RILFSSWESSSELS Trigger: AGACAATTCACTCGAACTTTCCCAGCTGGAAAACAAAATCCTCAATGTCACCACAGAAATGCTGAAGATGGCAACAAGGTACAGGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS GCA 72 bp | ACAGTCTTTGAATGGTCCTTCATTGATGAAAGTCACTaGTGGAATCTTGAAAGGGCTTTTCGTGGGAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: TVFEWSFIDESH*WNLERAFRGSC Trigger: ACAGCTCCCACGAAAAGCCCTTTCAAGATTCCAGCAGTGACTTTCATCAATGAAGGACCATTCAAAGACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027885.8 |
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| CDS CCA 72 bp | TCATACAGCATCAGCATACCAGCTTCGTTCTTCCATTaGCCAGGAAGCAGTAACTCACCTTCATTGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: SYSISIPASFFH*PGSSNSPSLMK Trigger: TTTCATCAATGAAGGTGAGTTACTGCTTCCTGGCCAATGGAAGAACGAAGCTGGTATGCTGATGCTGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111720.2 |
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| CDS CAA 72 bp | GCCATCTTCAGCATTTCTGTGGTGACATTGAGGATTTaGTTTTCCAGCTGGGAAAGTTCGAGTGAATTGTCT | + |
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Preference number: 6 (lower is better) Translates to: AIFSISVVTLRI*FSSWESSSELS Trigger: AGACAATTCACTCGAACTTTCCCAGCTGGAAAACAAAATCCTCAATGTCACCACAGAAATGCTGAAGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CAA 72 bp | TACCTTGTTGCCATCTTCAGCATTTCTGTGGTGACATaGAGGATTTTGTTTTCCAGCTGGGAAAGTTCGAGT | + |
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Preference number: 6 (lower is better) Translates to: YLVAIFSISVVT*RILFSSWESSS Trigger: ACTCGAACTTTCCCAGCTGGAAAACAAAATCCTCAATGTCACCACAGAAATGCTGAAGATGGCAACAAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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| CDS CAA 90 bp | TACCTTGTTGCCATCTTCAGCATTTCTGTGGTGACATTGAGGATTTaGTTTTCCAGCTGGGAAAGTTCGAGTGAATTGTCTCTTTTACGG | + |
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Preference number: 6 (lower is better) Translates to: YLVAIFSISVVTLRI*FSSWESSSELSLLR Trigger: CCGTAAAAGAGACAATTCACTCGAACTTTCCCAGCTGGAAAACAAAATCCTCAATGTCACCACAGAAATGCTGAAGATGGCAACAAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027885.8 ENSMUST00000111720.2 |
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