Pregenerated sensors for ANGPT4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027460Ensembl transcript IDs: ENSMUST00000028955.6
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTCAAGTTCAGTCTGCCTCAGGTCATGGCAGGGAGTCCCGGCATaGAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCAGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: GSSSVCLRSWQGVPA*SRRGKSMGSTEAGA Trigger: GGCACCTGCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCTGCCATGACCTGAGGCAGACTGAACTTGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR CCA 90 bp | CTGGGCACTGATTTCTGGGCAGGGCCCAGCGTGCACAGAGTCACCTaGGTTGAGAATCCTCCTACGGCATCAGTCTCTGCAGGGCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LGTDFWAGPSVHRVT*VENPPTASVSAGLC Trigger: ACACAGCCCTGCAGAGACTGATGCCGTAGGAGGATTCTCAACCCAGGTGACTCTGTGCACGCTGGGCCCTGCCCAGAAATCAGTGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR TCA 90 bp | TTCAGGGGCAAGGTAAGCTGGCTCCGATGTTCCAGAATGTCAAGATaGGCCCTGGGCACTGATTTCTGGGCAGGGCCCAGCGTGCACAGA | + |
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Preference number: 1 (lower is better) Translates to: FRGKVSWLRCSRMSR*ALGTDFWAGPSVHR Trigger: TCTGTGCACGCTGGGCCCTGCCCAGAAATCAGTGCCCAGGGCTCATCTTGACATTCTGGAACATCGGAGCCAGCTTACCTTGCCCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR CCA 90 bp | TGGCTAGCACTGGGGACTGGGAGTGGGAACAGTGTTCACCAGCCTTaGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTTGGAA | + |
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Preference number: 1 (lower is better) Translates to: WLALGTGSGNSVHQP*KESLRTSQAERNLE Trigger: TTCCAAGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTGTTCCCACTCCCAGTCCCCAGTGCTAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR TCA 90 bp | GCACACTGGCGTAAAAAGATCCCTTCTCCTATTTCTAGAAGCCTCTaGGAGATCAGGTCTGACTCAGTCATTGAAGTCCAAGAGCCACGG | + |
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Preference number: 1 (lower is better) Translates to: AHWRKKIPSPISRSL*EIRSDSVIEVQEPR Trigger: CCGTGGCTCTTGGACTTCAATGACTGAGTCAGACCTGATCTCTCAGAGGCTTCTAGAAATAGGAGAAGGGATCTTTTTACGCCAGTGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR-3UTR CCA 90 bp | CATGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCAGGTGCCTCAAGCACTGGGCACTGATTTCTaGGCAGGGCCCAGCGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: HAAGGERVWVPQRQVPQALGTDF*AGPSVH Trigger: GTGCACGCTGGGCCCTGCCCAGAAATCAGTGCCCAG...TGCTTGAGGCACCTGCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGGGAGTCCCGGCATGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCAGGGGCAAGGTAAGCTaGCTCCGATGTTCCAGAATG | + |
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Preference number: 2 (lower is better) Translates to: AGSPGMQQEGKEYGFHRGRGKVS*LRCSRM Trigger: CATTCTGGAACATCGGAGCCAGCTTACCTTGCCCCT...GCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR-3UTR GCA 90 bp | CTAGCACTGGGGACTGGGAGTGGGAACAGTGTTCACCAGCCTTGGAAAGAAAGTCAGGGAGTCCCGGCATaGAGCAGGAGGGGAAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: LALGTGSGNSVHQPWKESQGVPA*SRRGKS Trigger: ACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCTG...ACTTTCTTTCCAAGGCTGGTGAACACTGTTCCCACTCCCAGTCCCCAGTGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAAATGAGCCCTGGGCACTaGTTTCTGGGCAGGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: QCSPALERKSADISSREKMSPGH*FLGRAQ Trigger: CTGGGCCCTGCCCAGAAATCAGTGCCCAGGGCTCAT...TTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR CAA 90 bp | GTGGCTAGCACTGGGGACTGGGAGTGGGAACAGTGTTCACCAGCCTaGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTTGGA | + |
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Preference number: 2 (lower is better) Translates to: VASTGDWEWEQCSPA*ERKSADISSREKLG Trigger: TCCAAGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTGTTCCCACTCCCAGTCCCCAGTGCTAGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR CAA 90 bp | CAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTaGGAATTAGAGAAGAGTGAGAGACTCTCGTTCTCACCTGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: QPWKESLRTSQAERN*ELEKSERLSFSPGG Trigger: TCCTCCAGGTGAGAACGAGAGTCTCTCACTCTTCTCTAATTCCAAGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR-3UTR CCA 90 bp | TTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTTGGAATTAGAGAATGTCAAGATGAGCCCTaGGCACTGATTTCTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LERKSADISSREKLGIRECQDEP*ALISGQ Trigger: CTGCCCAGAAATCAGTGCCCAGGGCTCATCTTGACA...TTCTCTAATTCCAAGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR TCA 72 bp | CTGGGCAGGGCCCAGCGTGCACAGAGTCACCTGGGTTaGGAATCCTCCTACGGCATCAGTCTCTGCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: LGRAQRAQSHLG*ESSYGISLCRA Trigger: AGCCCTGCAGAGACTGATGCCGTAGGAGGATTCTCAACCCAGGTGACTCTGTGCACGCTGGGCCCTGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR CCA 72 bp | AGGGAGTCCCGGCATGCAGCAGGAGGGGAAAGAGTATaGGTTCCACAGAGGCAGGTGCCTCAAGCACCCAGC | + |
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Preference number: 3 (lower is better) Translates to: RESRHAAGGERV*VPQRQVPQAPS Trigger: GCTGGGTGCTTGAGGCACCTGCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR CCA 72 bp | CCTCTGAGGGGGTCAAGTTCAGTCTGCCTCAGGTCATaGCAGGGAGTCCCGGCATGCAGCAGGAGGGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: PLRGSSSVCLRS*QGVPACSRRGK Trigger: CTTTCCCCTCCTGCTGCATGCCGGGACTCCCTGCCATGACCTGAGGCAGACTGAACTTGACCCCCTCAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR GCA 72 bp | TCAGTCTGCCTCAGGTCATGGCAGGGAGTCCCGGCATaGAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: SVCLRSWQGVPA*SRRGKSMGSTE Trigger: CTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCTGCCATGACCTGAGGCAGACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR TCA 72 bp | CCGATGTTCCAGAATGTCAAGATGAGCCCTGGGCACTaGTTTCTGGGCAGGGCCCAGCGTGCACAGAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: PMFQNVKMSPGH*FLGRAQRAQSH Trigger: GTGACTCTGTGCACGCTGGGCCCTGCCCAGAAATCAGTGCCCAGGGCTCATCTTGACATTCTGGAACATCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR CCA 72 bp | GATTTCTGGGCAGGGCCCAGCGTGCACAGAGTCACCTaGGTTGAGAATCCTCCTACGGCATCAGTCTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: DFWAGPSVHRVT*VENPPTASVSA Trigger: TGCAGAGACTGATGCCGTAGGAGGATTCTCAACCCAGGTGACTCTGTGCACGCTGGGCCCTGCCCAGAAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR TCA 72 bp | AAGGTAAGCTGGCTCCGATGTTCCAGAATGTCAAGATaGGCCCTGGGCACTGATTTCTGGGCAGGGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: KVSWLRCSRMSR*ALGTDFWAGPS Trigger: GCTGGGCCCTGCCCAGAAATCAGTGCCCAGGGCTCATCTTGACATTCTGGAACATCGGAGCCAGCTTACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR-3UTR CAA 90 bp | CAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAAACAGAGTCACCTGGGTaGAGAATCCTCCTACGGCAT | + |
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Preference number: 3 (lower is better) Translates to: QCSPALERKSADISSREKTESPG*RILLRH Trigger: ATGCCGTAGGAGGATTCTCAACCCAGGTGACTCTGT...TTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR-3UTR CAA 90 bp | GTAAAAAGATCCCTTCTCCTATTTCTAGAAGCCTCTGAGAGATCAGGTCTGACTCAAGCCGAGAGAAACTaGGAATTAGAGAAGAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: VKRSLLLFLEASERSGLTQAERN*ELEKSE Trigger: CTCACTCTTCTCTAATTCCAAGTTTCTCTCGGCTTG...AGTCAGACCTGATCTCTCAGAGGCTTCTAGAAATAGGAGAAGGGATCTTTTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR TCA 72 bp | CGTAAAAAGATCCCTTCTCCTATTTCTAGAAGCCTCTaGGAGATCAGGTCTGACTCAGTCATTGAAGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: RKKIPSPISRSL*EIRSDSVIEVQ Trigger: TTGGACTTCAATGACTGAGTCAGACCTGATCTCTCAGAGGCTTCTAGAAATAGGAGAAGGGATCTTTTTACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR CCA 72 bp | TTAGTTATTACCTATGGAAAACACTCTAGGGCACACTaGCGTAAAAAGATCCCTTCTCCTATTTCTAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: LVITYGKHSRAH*RKKIPSPISRS Trigger: GCTTCTAGAAATAGGAGAAGGGATCTTTTTACGCCAGTGTGCCCTAGAGTGTTTTCCATAGGTAATAACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR CCA 90 bp | CAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCAGGTGCCTCAAGCACCCAACACGCTGGGCCCGCTaGGCCCTCTGGGCTCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QQEGKEYGFHRGRCLKHPTRWAR*ALWARQ Trigger: CTGGCGAGCCCAGAGGGCCCAGCGGGCCCAGCGTGT...TGGGTGCTTGAGGCACCTGCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR CCA 90 bp | GCAGGGAGTCCCGGCATGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCCCAGTGCCTGCAGCCTaGTCTCCAGGGCCCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: AGSPGMQQEGKEYGFHRGPVPAA*SPGPCC Trigger: GCAACAGGGCCCTGGAGACCAGGCTGCAGGCACTGG...GCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR CCA 90 bp | GCAGGGAGTCCCGGCATGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCCCATCCTCCCGGTGCTaGATGAGGGTCCAGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: AGSPGMQQEGKEYGFHRGPSSRC*MRVQPP Trigger: AGGTGGCTGGACCCTCATCCAGCACCGGGAGGATGG...GCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | CAGGTCATGGCAGGGAGTCCCGGCATGCAGCAGGAGGGGAAAGAGTATGGGTTCTGTGCTTCCAGTGCCTaGAGCCTGGTCTCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QVMAGSPGMQQEGKEYGFCASSA*SLVSRA Trigger: GGCCCTGGAGACCAGGCTGCAGGCACTGGAAGCACA...GAACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCTGCCATGACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | CTCTCGTTCTCACCTGGAGGAGGGCACCCCAGGCTGCAAGATTTCCCCACCTGCGAGCCAGGCTGTTCTTaGGCCCTGCTGAACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSFSPGGGHPRLQDFPTCEPGCS*ALLNCC Trigger: GCAGCAGTTCAGCAGGGCGCAAGAACAGCCTGGCTC...GCAGGTGGGGAAATCTTGCAGCCTGGGGTGCCCTCCTCCAGGTGAGAACGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR CCA 90 bp | CATGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCAGGTGCCTCAAGCAGTGCCCACCGGCTTCTaGCCCTCTGTGCTGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HAAGGERVWVPQRQVPQAVPTGF*PSVLGC Trigger: GCAGCCCAGCACAGAGGGCCAGAAGCCGGTGGGCAC...TGCTTGAGGCACCTGCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR CAA 72 bp | TCTGGGCAGGGCCCAGCGTGCACAGAGTCACCTGGGTaGAGAATCCTCCTACGGCATCAGTCTCTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SGQGPACTESPG*RILLRHQSLQG Trigger: GCCCTGCAGAGACTGATGCCGTAGGAGGATTCTCAACCCAGGTGACTCTGTGCACGCTGGGCCCTGCCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR TCA 90 bp | GGGTTCCACAGAGGCAGGTGCCTCAAGCACCCAGCATTTCACACTAGAGGGGCAAGGCCGTTCTGCTGGTaGGGCGGTGCACAGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: GFHRGRCLKHPAFHTRGARPFCW*GGAQPH Trigger: ATGAGGCTGTGCACCGCCTCACCAGCAGAACGGCCT...TGCCCCTCTAGTGTGAAATGCTGGGTGCTTGAGGCACCTGCCTCTGTGGAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | CTCTCGTTCTCACCTGGAGGAGGGCACCCCAGGCTGCAAGATTTCCCCACCTGCTGCTGCTGCTGCTGCTaGAGGGAGCTGGAATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSFSPGGGHPRLQDFPTCCCCCC*RELELL Trigger: CAGCAATTCCAGCTCCCTGCAGCAGCAGCAGCAGCA...GCAGGTGGGGAAATCTTGCAGCCTGGGGTGCCCTCCTCCAGGTGAGAACGAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | GCAGGGAGTCCCGGCATGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCGCCCTGCTGAACTGCTaGTGTCATTCACAGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: AGSPGMQQEGKEYGFHRGALLNC*CHSQRG Trigger: GCCTCTCTGTGAATGACAGCAGCAGTTCAGCAGGGC...GCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR TCA 90 bp | GGAGTCCCGGCATGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCAGGTGGCCTGCACCAGGTGTaGCCTCAAGTTCACCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: GVPACSRRGKSMGSTEAGGLHQV*PQVHLD Trigger: ATCAAGGTGAACTTGAGGTCACACCTGGTGCAGGCC...ACCTGCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | CTCAGGTCATGGCAGGGAGTCCCGGCATGCAGCAGGAGGGGAAAGAGTATGGGTACAAACTCCGTCAGTTaGTGCTGCTGCTGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LRSWQGVPACSRRGKSMGTNSVS*CCCCCR Trigger: CCTGCAGCAGCAGCAGCAGCAACTGACGGAGTTTGT...ACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCTGCCATGACCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR TCA 90 bp | CTCTCGTTCTCACCTGGAGGAGGGCACCCCAGGCTGCAAGATTTCCCCACCTGCACCTCAAGTTCACCTTaGTGGACTGCTCCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LSFSPGGGHPRLQDFPTCTSSSP*WTAPAS Trigger: TGAAGCTGGAGCAGTCCATCAAGGTGAACTTGAGGT...GCAGGTGGGGAAATCTTGCAGCCTGGGGTGCCCTCCTCCAGGTGAGAACGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | GGAACAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGACCCTCTGTGCTGGGCTaGAGCCATGGTGGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GTVFTSLGKKVCGHLKPRPSVLG*SHGGQQ Trigger: CTGCTGGCCACCATGGCTGCAGCCCAGCACAGAGGG...TCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR CCA 90 bp | AACAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAGCCCGCTGGGCCCTCTaGGCTCGCCAGTCTGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: NSVHQPWKESLRTSQAERARWAL*ARQSVR Trigger: CCTAACAGACTGGCGAGCCCAGAGGGCCCAGCGGGC...TCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR TCA 90 bp | CAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACCTCCCGGTGCTGGATaGGGGTCCAGCCACCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: QCSPALERKSADISSREKPPGAG*GSSHLH Trigger: ATGGAGGTGGCTGGACCCTCATCCAGCACCGGGAGG...TTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | AACAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGATCTCCAGGGCCCTGTTaGGACCCTGCAGCCGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: NSVHQPWKESLRTSQAERSPGPC*DPAAAA Trigger: TGCAGCGGCTGCAGGGTCGCAACAGGGCCCTGGAGA...TCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | TGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCAGGTGCCTCAAGCACCTGGCCCAGGAGACTGTaGAGTTGTTCCCTCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: CSRRGKSMGSTEAGASSTWPRRL*SCSLFS Trigger: AGAGAAGAGGGAACAACTGCACAGTCTCCTGGGCCA...GGTGCTTGAGGCACCTGCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR CCA 90 bp | GGAGTCCCGGCATGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCAGGTATCTCTGCACAGTCCTaGAACACTGGCTTAGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GVPACSRRGKSMGSTEAGISAQS*NTGLGV Trigger: GACACCTAAGCCAGTGTTCCAGGACTGTGCAGAGAT...ACCTGCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | AACAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAGCTTCTGGCCCTCTGTaGTGGGCTGCAGCCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: NSVHQPWKESLRTSQAERASGPL*WAAAMV Trigger: CACCATGGCTGCAGCCCAGCACAGAGGGCCAGAAGC...TCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | CTAGCACTGGGGACTGGGAGTGGGAACAGTGTTCACCAGCCTTGGAAAGAAAGTACCGCTGCCTCTCGCTaGCCAGCTGGAAGTTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LALGTGSGNSVHQPWKESTAASR*PAGSSH Trigger: ATGAGAACTTCCAGCTGGGCAGCGAGAGGCAGCGGT...ACTTTCTTTCCAAGGCTGGTGAACACTGTTCCCACTCCCAGTCCCCAGTGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR CCA 90 bp | CATGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCAGGTGCCTCAAGCACCAGCCAGTGCTCTCTaGCCACATTACCAAAACCCT | + |
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Preference number: 4 (lower is better) Translates to: HAAGGERVWVPQRQVPQAPASAL*PHYQNP Trigger: AGGGTTTTGGTAATGTGGCCAGAGAGCACTGGCTGG...TGCTTGAGGCACCTGCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| 3UTR CAA 72 bp | ACTGGGGACTGGGAGTGGGAACAGTGTTCACCAGCCTaGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TGDWEWEQCSPA*ERKSADISSRE Trigger: CTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTGTTCCCACTCCCAGTCCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | CTAGCACTGGGGACTGGGAGTGGGAACAGTGTTCACCAGCCTTGGAAAGAAAGTCTCTGCATCAGCATCTaGCGCTCCAGCTTGTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LALGTGSGNSVHQPWKESLCISI*RSSLLV Trigger: CACCAACAAGCTGGAGCGGCAGATGCTGATGCAGAG...ACTTTCTTTCCAAGGCTGGTGAACACTGTTCCCACTCCCAGTCCCCAGTGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR GCA 90 bp | GTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTTCCGTCAGTTGCTGCTaGTGCTGCTGCAGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFTSLGKKVCGHLKPRETSVSCC*CCCREL Trigger: CAGCTCCCTGCAGCAGCAGCAGCAGCAACTGACGGA...AGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CCA 90 bp | AGAGTCACCTGGGTTGAGAATCCTCCTACGGCATCAGTCTCTGCAGGGCTGTGTGTAGTTGTCTGGTTCTaGATTGTGTCCTGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVTWVENPPTASVSAGLCVVVWF*IVSCWA Trigger: GGCCCAGCAGGACACAATCCAGAACCAGACAACTAC...ACACAGCCCTGCAGAGACTGATGCCGTAGGAGGATTCTCAACCCAGGTGACTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CCA 90 bp | CAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACGTGCAGTGAGTAGCTaGGGCCTCGGAAGTAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QCSPALERKSADISSREKRAVSS*GLGSSA Trigger: GGCACTACTTCCGAGGCCCCAGCTACTCACTGCACG...TTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR GCA 90 bp | AACAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTCCGTCAGTTGCTaGTGCTGCTGCTGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSVHQPWKESLRTSQAERNSVSC*CCCCRE Trigger: CTCCCTGCAGCAGCAGCAGCAGCAACTGACGGAGTT...TCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CCA 90 bp | GTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTTGGATTGTGTCCTGCTaGGCCTGCACCAGGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFTSLGKKVCGHLKPRETWIVSC*ACTRCD Trigger: GTCACACCTGGTGCAGGCCCAGCAGGACACAATCCA...AGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CCA 90 bp | CATGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCAGGTGCCTCAAGCAAGCATGGTAGTTGTCTaGTTCTGGATTGTGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HAAGGERVWVPQRQVPQASMVVV*FWIVSC Trigger: GCAGGACACAATCCAGAACCAGACAACTACCATGCT...TGCTTGAGGCACCTGCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCAGGTGCCTCAAGCACCCAGAGTTCTCCAGCATTTaGGTCTTCATGTGCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QQEGKEYGFHRGRCLKHPEFSSI*VFMCNV Trigger: GACATTGCACATGAAGACCCAAATGCTGGAGAACTC...TGGGTGCTTGAGGCACCTGCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CCA 90 bp | CTAGCACTGGGGACTGGGAGTGGGAACAGTGTTCACCAGCCTTGGAAAGAAAGTGCTCCAGCTTGTTGGTaGACAGTGAGTTCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LALGTGSGNSVHQPWKESAPACW*TVSSPA Trigger: TGCTGGAGAACTCACTGTCCACCAACAAGCTGGAGC...ACTTTCTTTCCAAGGCTGGTGAACACTGTTCCCACTCCCAGTCCCCAGTGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR TCA 90 bp | GTAAAAAGATCCCTTCTCCTATTTCTAGAAGCCTCTGAGAGATCAGGTCTGACTGCGTGTGCCGTGCAGTaGGTAGCTGGGGCCTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKRSLLLFLEASERSGLTACAVQ*VAGASE Trigger: TTCCGAGGCCCCAGCTACTCACTGCACGGCACACGC...AGTCAGACCTGATCTCTCAGAGGCTTCTAGAAATAGGAGAAGGGATCTTTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAAGAGGTTGGCACCCAGTaGCAGCATGGTAGTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QCSPALERKSADISSREKEVGTQ*QHGSCL Trigger: CAGACAACTACCATGCTGGCACTGGGTGCCAACCTC...TTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR GCA 90 bp | AGAGACTCTCGTTCTCACCTGGAGGAGGGCACCCCAGGCTGCAAGATTTCCCCAATTTGGGTCTTCATGTaGAATGTCTGGTTTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RDSRSHLEEGTPGCKISPIWVFM*NVWFRT Trigger: GGTCCTAAACCAGACATTGCACATGAAGACCCAAAT...TGGGGAAATCTTGCAGCCTGGGGTGCCCTCCTCCAGGTGAGAACGAGAGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR GCA 90 bp | GGAACAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAAGAGCGTGCAGATTGTaGTTCAGGTTAGCCAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTVFTSLGKKVCGHLKPRRACRL*FRLARV Trigger: GACCCTGGCTAACCTGAAGCACAATCTGCACGCTCT...TCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR GCA 90 bp | AGATCCCTTCTCCTATTTCTAGAAGCCTCTGAGAGATCAGGTCTGACTCAGTCAGGTGCACAGCCTCATTaGCCAGCCAGTGCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSLLLFLEASERSGLTQSGAQPH*PASALW Trigger: CCAGAGAGCACTGGCTGGGCAATGAGGCTGTGCACC...TGACTGAGTCAGACCTGATCTCTCAGAGGCTTCTAGAAATAGGAGAAGGGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR GCA 90 bp | CAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAATCAGCATCATGCGTGTaGCGTGCAGTGAGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCSPALERKSADISSREKSASCV*RAVSSW Trigger: CCAGCTACTCACTGCACGGCACACGCATGATGCTGA...TTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CCA 90 bp | GTAAAAAGATCCCTTCTCCTATTTCTAGAAGCCTCTGAGAGATCAGGTCTGACTGCTGTCGGCGCCAGCTaGCAGATATCAGGCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VKRSLLLFLEASERSGLTAVGAS*QISGSG Trigger: GCCGGAGCCTGATATCTGCCAGCTGGCGCCGACAGC...AGTCAGACCTGATCTCTCAGAGGCTTCTAGAAATAGGAGAAGGGATCTTTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR TCA 90 bp | ACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTTGGAATGTTCTTGCGCCCTGCTaGACTGCTGCTGTCATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TSLGKKVCGHLKPRETWNVLAPC*TAAVIH Trigger: GTGAATGACAGCAGCAGTTCAGCAGGGCGCAAGAAC...ATTCCAAGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR GCA 90 bp | GTAAAAAGATCCCTTCTCCTATTTCTAGAAGCCTCTGAGAGATCAGGTCTGACTCTGCTGGTGAGGCGGTaGACAGCCTCATTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKRSLLLFLEASERSGLTLLVRR*TASLPS Trigger: GCTGGGCAATGAGGCTGTGCACCGCCTCACCAGCAG...AGTCAGACCTGATCTCTCAGAGGCTTCTAGAAATAGGAGAAGGGATCTTTTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR GCA 90 bp | GGAACAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGATTGCTGCTGAGAGCGTaGAGATTGTGCTTCAGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GTVFTSLGKKVCGHLKPRLLLRA*RLCFRL Trigger: TAACCTGAAGCACAATCTGCACGCTCTCAGCAGCAA...TCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR TCA 90 bp | AGATCCCTTCTCCTATTTCTAGAAGCCTCTGAGAGATCAGGTCTGACTCAGTCAGTCAGCTTGTGGGTCTaGGCTTTGGTCTGGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RSLLLFLEASERSGLTQSVSLWV*ALVWFM Trigger: CATGAACCAGACCAAAGCTCAGACCCACAAGCTGAC...TGACTGAGTCAGACCTGATCTCTCAGAGGCTTCTAGAAATAGGAGAAGGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR GCA 90 bp | CTTCTCCTATTTCTAGAAGCCTCTGAGAGATCAGGTCTGACTCAGTCATTGAAGGGAGCGCTTGATCTCTaGACAGTCCTGGAACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLFLEASERSGLTQSLKGALDL*TVLEHW Trigger: CCAGTGTTCCAGGACTGTGCAGAGATCAAGCGCTCC...CTTCAATGACTGAGTCAGACCTGATCTCTCAGAGGCTTCTAGAAATAGGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CCA 90 bp | TTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTTGGAATTAGAGAAGCCGCTCCAGCTTGTTaGTGGACAGTGAGTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LERKSADISSREKLGIREAAPAC*WTVSSP Trigger: TGGAGAACTCACTGTCCACCAACAAGCTGGAGCGGC...TTCTCTAATTCCAAGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR TCA 90 bp | TTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTTGGAATTAGAGAATGTCACAGAACACCTTaGGAGGCTTTGTCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LERKSADISSREKLGIRECHRTP*EALSCW Trigger: CCAACATGACAAAGCCTCTCAAGGTGTTCTGTGACA...TTCTCTAATTCCAAGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR TCA 90 bp | AGATCCCTTCTCCTATTTCTAGAAGCCTCTGAGAGATCAGGTCTGACTCAGTCACAAGTGCTGATGAACTaGATAGTAGATGCCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSLLLFLEASERSGLTQSQVLMN*IVDAIE Trigger: CTCAATGGCATCTACTATTCAGTTCATCAGCACTTG...TGACTGAGTCAGACCTGATCTCTCAGAGGCTTCTAGAAATAGGAGAAGGGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| 3UTR CAA 72 bp | AAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTaGGAATTAGAGAAGAGTGAGAGACTCTCGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KESLRTSQAERN*ELEKSERLSFS Trigger: TGAGAACGAGAGTCTCTCACTCTTCTCTAATTCCAAGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR TCA 90 bp | TTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTTGGAATTAGAGAAAGCTTCAGCAGCCACTaGGTGTTATTCTCTAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LERKSADISSREKLGIRESFSSH*VLFSSI Trigger: GATACTAGAGAATAACACTCAGTGGCTGCTGAAGCT...TTCTCTAATTCCAAGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS TCA 90 bp | CCCAGTCATGCAGTTCCACGCGTAGCAAGTAGGCCGTTCTGCTGGTaGGGCGGTGCACAGCCTCATTGCCCAGCCAGTGCTCTCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSHAVPRVASRPFCW*GGAQPHCPASALWP Trigger: TGGCCAGAGAGCACTGGCTGGGCAATGAGGCTGTGCACCGCCTCACCAGCAGAACGGCCTACTTGCTACGCGTGGAACTGCATGACTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS GCA 90 bp | TGGTGCCCTGAGGAGCCAGGCTGTTCTTGCGCCCTGCTGAACTGCTaGTGTCATTCACAGAGAGGCTGTACCGCTGCCTCTCGCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WCPEEPGCSCALLNC*CHSQRGCTAASRCP Trigger: TGGGCAGCGAGAGGCAGCGGTACAGCCTCTCTGTGAATGACAGCAGCAGTTCAGCAGGGCGCAAGAACAGCCTGGCTCCTCAGGGCACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS GCA 90 bp | ACTTGGTGCCCTGAGGAGCCAGGCTGTTCTTGCGCCCTGCTGAACTaGTGCTGTCATTCACAGAGAGGCTGTACCGCTGCCTCTCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TWCPEEPGCSCALLN*CCHSQRGCTAASRC Trigger: GCAGCGAGAGGCAGCGGTACAGCCTCTCTGTGAATGACAGCAGCAGTTCAGCAGGGCGCAAGAACAGCCTGGCTCCTCAGGGCACCAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS CCA 90 bp | AGGCTGTACCGCTGCCTCTCGCTGCCCAGCTGGAAGTTCTCATACTaGATGGAGGTCTGGCGGCCTTCCCAGTCATGCAGTTCCACGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RLYRCLSLPSWKFSY*MEVWRPSQSCSSTR Trigger: ACGCGTGGAACTGCATGACTGGGAAGGCCGCCAGACCTCCATCCAGTATGAGAACTTCCAGCTGGGCAGCGAGAGGCAGCGGTACAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS GCA 90 bp | TTGCGACCCTGCAGCCGCTGCAGCTCTCGGCTCTGCATCAGCATCTaGCGCTCCAGCTTGTTGGTGGACAGTGAGTTCTCCAGCATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRPCSRCSSRLCISI*RSSLLVDSEFSSIW Trigger: CCAAATGCTGGAGAACTCACTGTCCACCAACAAGCTGGAGCGGCAGATGCTGATGCAGAGCCGAGAGCTGCAGCGGCTGCAGGGTCGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS CCA 90 bp | TGTACCGCTGCCTCTCGCTGCCCAGCTGGAAGTTCTCATACTGGATaGAGGTCTGGCGGCCTTCCCAGTCATGCAGTTCCACGCGTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CTAASRCPAGSSHTG*RSGGLPSHAVPRVA Trigger: TGCTACGCGTGGAACTGCATGACTGGGAAGGCCGCCAGACCTCCATCCAGTATGAGAACTTCCAGCTGGGCAGCGAGAGGCAGCGGTACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CAA 90 bp | CTCAGGTCATGGCAGGGAGTCCCGGCATGCAGCAGGAGGGGAAAGAGTATGGGTGTCTGGTTCATGAGGTaGGCACCCAGTGCCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: LRSWQGVPACSRRGKSMGVWFMR*APSASM Trigger: CATGCTGGCACTGGGTGCCAACCTCATGAACCAGAC...ACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCTGCCATGACCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS GCA 90 bp | TGGGCTACAATCCGTACCAGGCGCTGTACAAACTCCGTCAGTTGCTaGTGCTGCTGCTGCAGGGAGCTGGAATTGCTGCTGAGAGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WATIRTRRCTNSVSC*CCCCRELELLLRAC Trigger: GCACGCTCTCAGCAGCAATTCCAGCTCCCTGCAGCAGCAGCAGCAGCAACTGACGGAGTTTGTACAGCGCCTGGTACGGATTGTAGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS GCA 90 bp | TCCTGGGCTACAATCCGTACCAGGCGCTGTACAAACTCCGTCAGTTaGTGCTGCTGCTGCTGCAGGGAGCTGGAATTGCTGCTGAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SWATIRTRRCTNSVS*CCCCCRELELLLRA Trigger: CGCTCTCAGCAGCAATTCCAGCTCCCTGCAGCAGCAGCAGCAGCAACTGACGGAGTTTGTACAGCGCCTGGTACGGATTGTAGCCCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS CCA 90 bp | CTGTCATTCACAGAGAGGCTGTACCGCTGCCTCTCGCTGCCCAGCTaGAAGTTCTCATACTGGATGGAGGTCTGGCGGCCTTCCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSFTERLYRCLSLPS*KFSYWMEVWRPSQS Trigger: TGACTGGGAAGGCCGCCAGACCTCCATCCAGTATGAGAACTTCCAGCTGGGCAGCGAGAGGCAGCGGTACAGCCTCTCTGTGAATGACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS TCA 90 bp | CTGAGAGCGTGCAGATTGTGCTTCAGGTTAGCCAGGGTCCCGGTCTaGTGGCCCAGGAGACTGTGCAGTTGTTCCCTCTTCTCTTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LRACRLCFRLARVPV*WPRRLCSCSLFSWR Trigger: CCTCCAAGAGAAGAGGGAACAACTGCACAGTCTCCTGGGCCATCAGACCGGGACCCTGGCTAACCTGAAGCACAATCTGCACGCTCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS GCA 90 bp | GCTACAATCCGTACCAGGCGCTGTACAAACTCCGTCAGTTGCTGCTaGTGCTGCTGCAGGGAGCTGGAATTGCTGCTGAGAGCGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ATIRTRRCTNSVSCC*CCCRELELLLRACR Trigger: TCTGCACGCTCTCAGCAGCAATTCCAGCTCCCTGCAGCAGCAGCAGCAGCAACTGACGGAGTTTGTACAGCGCCTGGTACGGATTGTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS CCA 90 bp | CCCAGTGCCAGCATGGTAGTTGTCTGGTTCTGGATTGTGTCCTGCTaGGCCTGCACCAGGTGTGACCTCAAGTTCACCTTGATGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSASMVVVWFWIVSC*ACTRCDLKFTLMDC Trigger: GCAGTCCATCAAGGTGAACTTGAGGTCACACCTGGTGCAGGCCCAGCAGGACACAATCCAGAACCAGACAACTACCATGCTGGCACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CAA 90 bp | AGAGACTCTCGTTCTCACCTGGAGGAGGGCACCCCAGGCTGCAAGATTTCCCCACAGGAGACTGTGCAGTaGTTCCCTCTTCTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RDSRSHLEEGTPGCKISPQETVQ*FPLLLE Trigger: CTCCAAGAGAAGAGGGAACAACTGCACAGTCTCCTG...TGGGGAAATCTTGCAGCCTGGGGTGCCCTCCTCCAGGTGAGAACGAGAGTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS GCA 90 bp | CTTGTGGGTCTGAGCTTTGGTCTGGTTCATGAGGTTGGCACCCAGTaGCAGCATGGTAGTTGTCTGGTTCTGGATTGTGTCCTGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVGLSFGLVHEVGTQ*QHGSCLVLDCVLLG Trigger: GCCCAGCAGGACACAATCCAGAACCAGACAACTACCATGCTGGCACTGGGTGCCAACCTCATGAACCAGACCAAAGCTCAGACCCACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CAA 90 bp | GCAGGGAGTCCCGGCATGCAGCAGGAGGGGAAAGAGTATGGGTTCCACAGAGGCATGTCACAGAACACCTaGAGAGGCTTTGTCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGSPGMQQEGKEYGFHRGMSQNT*RGFVML Trigger: CAACATGACAAAGCCTCTCAAGGTGTTCTGTGACAT...GCCTCTGTGGAACCCATACTCTTTCCCCTCCTGCTGCATGCCGGGACTCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS CCA 90 bp | ACACCGCTGGTATTAACCCCGGAGCGCTTGATCTCTGCACAGTCCTaGAACACTGGCTTAGGTGTCTTTAAGGAAACCGGATGCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPLVLTPERLISAQS*NTGLGVFKETGCWS Trigger: GGACCAGCATCCGGTTTCCTTAAAGACACCTAAGCCAGTGTTCCAGGACTGTGCAGAGATCAAGCGCTCCGGGGTTAATACCAGCGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS TCA 90 bp | TTGTGTCCTGCTGGGCCTGCACCAGGTGTGACCTCAAGTTCACCTTaGTGGACTGCTCCAGCTTCAGCAGCCACTGAGTGTTATTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LCPAGPAPGVTSSSP*WTAPASAATECYSL Trigger: TAGAGAATAACACTCAGTGGCTGCTGAAGCTGGAGCAGTCCATCAAGGTGAACTTGAGGTCACACCTGGTGCAGGCCCAGCAGGACACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CAA 90 bp | CAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAATGCAGGGAGCTGGAATaGCTGCTGAGAGCGTGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QCSPALERKSADISSREKCRELE*LLRACR Trigger: TCTGCACGCTCTCAGCAGCAATTCCAGCTCCCTGCA...TTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CAA 90 bp | GGGTTCCACAGAGGCAGGTGCCTCAAGCACCCAGCATTTCACACTAGAGGGGCACACATGCAGTTATCATaGTCCATGTCTTTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GFHRGRCLKHPAFHTRGAHMQLS*SMSLVL Trigger: CAGCACCAAAGACATGGACAATGATAACTGCATGTG...TGCCCCTCTAGTGTGAAATGCTGGGTGCTTGAGGCACCTGCCTCTGTGGAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS TCA 90 bp | GACCTCAAGTTCACCTTGATGGACTGCTCCAGCTTCAGCAGCCACTaGGTGTTATTCTCTAGTATCTTCTCCAGCTGGCTCACACGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DLKFTLMDCSSFSSH*VLFSSIFSSWLTRW Trigger: CCAGCGTGTGAGCCAGCTGGAGAAGATACTAGAGAATAACACTCAGTGGCTGCTGAAGCTGGAGCAGTCCATCAAGGTGAACTTGAGGTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
||
| CDS-3UTR CAA 90 bp | CTAGCACTGGGGACTGGGAGTGGGAACAGTGTTCACCAGCCTTGGAAAGAAAGTTCATTGTCCATGTCTTaGGTGCTGAACTTGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LALGTGSGNSVHQPWKESSLSMS*VLNLVP Trigger: GGGCACCAAGTTCAGCACCAAAGACATGGACAATGA...ACTTTCTTTCCAAGGCTGGTGAACACTGTTCCCACTCCCAGTCCCCAGTGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS TCA 90 bp | GTAGTGCCAGCGGATGCCATTGATCTTGTGCAAGTGCTGATGAACTaGATAGTAGATGCCATTGAGGTTGGAGAGGCCACAGGCATCAAA | + |
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Preference number: 5 (lower is better) Translates to: VVPADAIDLVQVLMN*IVDAIEVGEATGIK Trigger: TTTGATGCCTGTGGCCTCTCCAACCTCAATGGCATCTACTATTCAGTTCATCAGCACTTGCACAAGATCAATGGCATCCGCTGGCACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR CAA 90 bp | TTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGAGAAACTTGGAATTAGAGAATTAACCCCGGAGCGCTaGATCTCTGCACAGTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LERKSADISSREKLGIRELTPER*ISAQSW Trigger: CCAGGACTGTGCAGAGATCAAGCGCTCCGGGGTTAA...TTCTCTAATTCCAAGTTTCTCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR CAA 90 bp | GGAACAGTGTTCACCAGCCTTGGAAAGAAAGTCTGCGGACATCTCAAGCCGAGATTACCAAAACCCTCTTaGTATTCTTCCCAGGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GTVFTSLGKKVCGHLKPRLPKPS*YSSQVL Trigger: GAGGACCTGGGAAGAATACAAAGAGGGTTTTGGTAA...TCTCGGCTTGAGATGTCCGCAGACTTTCTTTCCAAGGCTGGTGAACACTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS-3UTR CAA 90 bp | GTAAAAAGATCCCTTCTCCTATTTCTAGAAGCCTCTGAGAGATCAGGTCTGACTTTGTTCCCTCTTCTCTaGGAGGCTGTTAAGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: VKRSLLLFLEASERSGLTLFPLL*EAVKLG Trigger: GCCCAGCTTAACAGCCTCCAAGAGAAGAGGGAACAA...AGTCAGACCTGATCTCTCAGAGGCTTCTAGAAATAGGAGAAGGGATCTTTTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | GCCCGCTGGGCCCTCTGGGCTCGCCAGTCTGTTAGGTaGAGCCTCGAGGCAGGCAAGTCCCTCTGGAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: ARWALWARQSVR*SLEAGKSLWRL Trigger: TAGCCTCCAGAGGGACTTGCCTGCCTCGAGGCTGCACCTAACAGACTGGCGAGCCCAGAGGGCCCAGCGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | GCCTGCAGCCTGGTCTCCAGGGCCCTGTTGCGACCCTaGAGCCGCTGCAGCTCTCGGCTCTGCATCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: ACSLVSRALLRP*SRCSSRLCISI Trigger: GATGCTGATGCAGAGCCGAGAGCTGCAGCGGCTGCAGGGTCGCAACAGGGCCCTGGAGACCAGGCTGCAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS TCA 72 bp | GCAGTTCCACGCGTAGCAAGTAGGCCGTTCTGCTGGTaGGGCGGTGCACAGCCTCATTGCCCAGCCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: AVPRVASRPFCW*GGAQPHCPASA Trigger: AGCACTGGCTGGGCAATGAGGCTGTGCACCGCCTCACCAGCAGAACGGCCTACTTGCTACGCGTGGAACTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | GGCAGATATCAGGCTCCGGCACCACAAAGGTGTAGCTaGACTGGCCACGCCGGACCTGGTGAATCTGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: GRYQAPAPQRCS*TGHAGPGESGG Trigger: ACCGCCAGATTCACCAGGTCCGGCGTGGCCAGTGCAGCTACACCTTTGTGGTGCCGGAGCCTGATATCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS TCA 72 bp | GGTGCCCTGAGGAGCCAGGCTGTTCTTGCGCCCTGCTaGACTGCTGCTGTCATTCACAGAGAGGCTGTACCG | + |
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Preference number: 6 (lower is better) Translates to: GALRSQAVLAPC*TAAVIHREAVP Trigger: CGGTACAGCCTCTCTGTGAATGACAGCAGCAGTTCAGCAGGGCGCAAGAACAGCCTGGCTCCTCAGGGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS TCA 72 bp | ACCCATTGGCCTCAGCATCATGCGTGTGCCGTGCAGTaGGTAGCTGGGGCCTCGGAAGTAGTGCCAGCGGAT | + |
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Preference number: 6 (lower is better) Translates to: THWPQHHACAVQ*VAGASEVVPAD Trigger: ATCCGCTGGCACTACTTCCGAGGCCCCAGCTACTCACTGCACGGCACACGCATGATGCTGAGGCCAATGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | TGCAGCCGCTGCAGCTCTCGGCTCTGCATCAGCATCTaGCGCTCCAGCTTGTTGGTGGACAGTGAGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSRCSSRLCISI*RSSLLVDSEFS Trigger: GGAGAACTCACTGTCCACCAACAAGCTGGAGCGGCAGATGCTGATGCAGAGCCGAGAGCTGCAGCGGCTGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CCA 72 bp | CGCTGCCTCTCGCTGCCCAGCTGGAAGTTCTCATACTaGATGGAGGTCTGGCGGCCTTCCCAGTCATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: RCLSLPSWKFSY*MEVWRPSQSCS Trigger: ACTGCATGACTGGGAAGGCCGCCAGACCTCCATCCAGTATGAGAACTTCCAGCTGGGCAGCGAGAGGCAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | CTTCTCTTGGAGGCTGTTAAGCTGGGCCTGATGTTGTaGTTCCAGTGCCTGCAGCCTGGTCTCCAGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LLLEAVKLGLML*FQCLQPGLQGP Trigger: AGGGCCCTGGAGACCAGGCTGCAGGCACTGGAAGCACAACATCAGGCCCAGCTTAACAGCCTCCAAGAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | TGCTGCTGCAGGGAGCTGGAATTGCTGCTGAGAGCGTaGAGATTGTGCTTCAGGTTAGCCAGGGTCCCGGTC | + |
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Preference number: 6 (lower is better) Translates to: CCCRELELLLRA*RLCFRLARVPV Trigger: GACCGGGACCCTGGCTAACCTGAAGCACAATCTGCACGCTCTCAGCAGCAATTCCAGCTCCCTGCAGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | AGGCGCTGTACAAACTCCGTCAGTTGCTGCTGCTGCTaGTGCAGGGAGCTGGAATTGCTGCTGAGAGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: RRCTNSVSCCCC*CRELELLLRAC Trigger: GCACGCTCTCAGCAGCAATTCCAGCTCCCTGCAGCAGCAGCAGCAGCAACTGACGGAGTTTGTACAGCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | ACCAGGCGCTGTACAAACTCCGTCAGTTGCTGCTGCTaGTGCTGCAGGGAGCTGGAATTGCTGCTGAGAGCG | + |
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Preference number: 6 (lower is better) Translates to: TRRCTNSVSCCC*CCRELELLLRA Trigger: CGCTCTCAGCAGCAATTCCAGCTCCCTGCAGCAGCAGCAGCAGCAACTGACGGAGTTTGTACAGCGCCTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CCA 72 bp | TTATTCTCTAGTATCTTCTCCAGCTGGCTCACACGCTaGGCCCGCTGGGCCCTCTGGGCTCGCCAGTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: LFSSIFSSWLTR*ARWALWARQSV Trigger: AACAGACTGGCGAGCCCAGAGGGCCCAGCGGGCCCAGCGTGTGAGCCAGCTGGAGAAGATACTAGAGAATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CCA 72 bp | CTGCCCAGCTGGAAGTTCTCATACTGGATGGAGGTCTaGCGGCCTTCCCAGTCATGCAGTTCCACGCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: LPSWKFSYWMEV*RPSQSCSSTRS Trigger: GCTACGCGTGGAACTGCATGACTGGGAAGGCCGCCAGACCTCCATCCAGTATGAGAACTTCCAGCTGGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CCA 72 bp | GCCTCTCGCTGCCCAGCTGGAAGTTCTCATACTGGATaGAGGTCTGGCGGCCTTCCCAGTCATGCAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: ASRCPAGSSHTG*RSGGLPSHAVP Trigger: TGGAACTGCATGACTGGGAAGGCCGCCAGACCTCCATCCAGTATGAGAACTTCCAGCTGGGCAGCGAGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CAA 72 bp | CCTCTTCTCTTGGAGGCTGTTAAGCTGGGCCTGATGTaGTGCTTCCAGTGCCTGCAGCCTGGTCTCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: PLLLEAVKLGLM*CFQCLQPGLQG Trigger: GCCCTGGAGACCAGGCTGCAGGCACTGGAAGCACAACATCAGGCCCAGCTTAACAGCCTCCAAGAGAAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CAA 72 bp | CAGGGTCCCGGTCTGATGGCCCAGGAGACTGTGCAGTaGTTCCCTCTTCTCTTGGAGGCTGTTAAGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QGPGLMAQETVQ*FPLLLEAVKLG Trigger: GCCCAGCTTAACAGCCTCCAAGAGAAGAGGGAACAACTGCACAGTCTCCTGGGCCATCAGACCGGGACCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS TCA 72 bp | GCTGGGCCTGCACCAGGTGTGACCTCAAGTTCACCTTaGTGGACTGCTCCAGCTTCAGCAGCCACTGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: AGPAPGVTSSSP*WTAPASAATEC Trigger: ACACTCAGTGGCTGCTGAAGCTGGAGCAGTCCATCAAGGTGAACTTGAGGTCACACCTGGTGCAGGCCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | ATCCGTACCAGGCGCTGTACAAACTCCGTCAGTTGCTaGTGCTGCTGCTGCAGGGAGCTGGAATTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: IRTRRCTNSVSC*CCCCRELELLL Trigger: CAGCAGCAATTCCAGCTCCCTGCAGCAGCAGCAGCAGCAACTGACGGAGTTTGTACAGCGCCTGGTACGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | CAGGTCCTCTGGAAATTTACGCTTCCATCCTCCCGGTaGTGGATGAGGGTCCAGCCACCTCCATCAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QVLWKFTLPSSR*WMRVQPPPSVS Trigger: GGAGACTGATGGAGGTGGCTGGACCCTCATCCAGCACCGGGAGGATGGAAGCGTAAATTTCCAGAGGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CCA 72 bp | ATGAGGTTGGCACCCAGTGCCAGCATGGTAGTTGTCTaGTTCTGGATTGTGTCCTGCTGGGCCTGCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: MRLAPSASMVVV*FWIVSCWACTR Trigger: CCTGGTGCAGGCCCAGCAGGACACAATCCAGAACCAGACAACTACCATGCTGGCACTGGGTGCCAACCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CAA 90 bp | ACAAACTCCGTCAGTTGCTGCTGCTGCTGCTGCAGGGAGCTGGAATaGCTGCTGAGAGCGTGCAGATTGTGCTTCAGGTTAGCCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: TNSVSCCCCCCRELE*LLRACRLCFRLARV Trigger: GACCCTGGCTAACCTGAAGCACAATCTGCACGCTCTCAGCAGCAATTCCAGCTCCCTGCAGCAGCAGCAGCAGCAACTGACGGAGTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS TCA 72 bp | TGTTCCCTCTTCTCTTGGAGGCTGTTAAGCTGGGCCTaGTGTTGTGCTTCCAGTGCCTGCAGCCTGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSLFSWRLLSWA*CCASSACSLVS Trigger: GGAGACCAGGCTGCAGGCACTGGAAGCACAACATCAGGCCCAGCTTAACAGCCTCCAAGAGAAGAGGGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS TCA 72 bp | TGCAGATTGTGCTTCAGGTTAGCCAGGGTCCCGGTCTaGTGGCCCAGGAGACTGTGCAGTTGTTCCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: CRLCFRLARVPV*WPRRLCSCSLF Trigger: GAAGAGGGAACAACTGCACAGTCTCCTGGGCCATCAGACCGGGACCCTGGCTAACCTGAAGCACAATCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | GCCAGCATGGTAGTTGTCTGGTTCTGGATTGTGTCCTaGTGGGCCTGCACCAGGTGTGACCTCAAGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: ASMVVVWFWIVS*WACTRCDLKFT Trigger: GGTGAACTTGAGGTCACACCTGGTGCAGGCCCAGCAGGACACAATCCAGAACCAGACAACTACCATGCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | ACAATCCGTACCAGGCGCTGTACAAACTCCGTCAGTTaGTGCTGCTGCTGCTGCAGGGAGCTGGAATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TIRTRRCTNSVS*CCCCCRELELL Trigger: CAGCAATTCCAGCTCCCTGCAGCAGCAGCAGCAGCAACTGACGGAGTTTGTACAGCGCCTGGTACGGATTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | GAACTGCTGCTGTCATTCACAGAGAGGCTGTACCGCTaGCTCTCGCTGCCCAGCTGGAAGTTCTCATACTGG | + |
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Preference number: 6 (lower is better) Translates to: ELLLSFTERLYR*LSLPSWKFSYW Trigger: CCAGTATGAGAACTTCCAGCTGGGCAGCGAGAGGCAGCGGTACAGCCTCTCTGTGAATGACAGCAGCAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CCA 72 bp | GTCCTCTGGAAATTTACGCTTCCATCCTCCCGGTGCTaGATGAGGGTCCAGCCACCTCCATCAGTCTCCATG | + |
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Preference number: 6 (lower is better) Translates to: VLWKFTLPSSRC*MRVQPPPSVSM Trigger: CATGGAGACTGATGGAGGTGGCTGGACCCTCATCCAGCACCGGGAGGATGGAAGCGTAAATTTCCAGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS TCA 72 bp | GTTCTGGATTGTGTCCTGCTGGGCCTGCACCAGGTGTaGCCTCAAGTTCACCTTGATGGACTGCTCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VLDCVLLGLHQV*PQVHLDGLLQL Trigger: AAGCTGGAGCAGTCCATCAAGGTGAACTTGAGGTCACACCTGGTGCAGGCCCAGCAGGACACAATCCAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | TGTCATTCACAGAGAGGCTGTACCGCTGCCTCTCGCTaGCCAGCTGGAAGTTCTCATACTGGATGGAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: CHSQRGCTAASR*PAGSSHTGWRS Trigger: AGACCTCCATCCAGTATGAGAACTTCCAGCTGGGCAGCGAGAGGCAGCGGTACAGCCTCTCTGTGAATGACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CAA 72 bp | TACAATCCGTACCAGGCGCTGTACAAACTCCGTCAGTaGCTGCTGCTGCTGCTGCAGGGAGCTGGAATTGCT | + |
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Preference number: 6 (lower is better) Translates to: YNPYQALYKLRQ*LLLLLQGAGIA Trigger: AGCAATTCCAGCTCCCTGCAGCAGCAGCAGCAGCAACTGACGGAGTTTGTACAGCGCCTGGTACGGATTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | GTAGTTGTCTGGTTCTGGATTGTGTCCTGCTGGGCCTaGACCAGGTGTGACCTCAAGTTCACCTTGATGGAC | + |
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Preference number: 6 (lower is better) Translates to: VVVWFWIVSCWA*TRCDLKFTLMD Trigger: GTCCATCAAGGTGAACTTGAGGTCACACCTGGTGCAGGCCCAGCAGGACACAATCCAGAACCAGACAACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CCA 72 bp | AGCATGGTAGTTGTCTGGTTCTGGATTGTGTCCTGCTaGGCCTGCACCAGGTGTGACCTCAAGTTCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: SMVVVWFWIVSC*ACTRCDLKFTL Trigger: CAAGGTGAACTTGAGGTCACACCTGGTGCAGGCCCAGCAGGACACAATCCAGAACCAGACAACTACCATGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CAA 72 bp | ATGGCCCAGGAGACTGTGCAGTTGTTCCCTCTTCTCTaGGAGGCTGTTAAGCTGGGCCTGATGTTGTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: MAQETVQLFPLL*EAVKLGLMLCF Trigger: GAAGCACAACATCAGGCCCAGCTTAACAGCCTCCAAGAGAAGAGGGAACAACTGCACAGTCTCCTGGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | CTGAGCTTTGGTCTGGTTCATGAGGTTGGCACCCAGTaGCAGCATGGTAGTTGTCTGGTTCTGGATTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: LSFGLVHEVGTQ*QHGSCLVLDCV Trigger: GACACAATCCAGAACCAGACAACTACCATGCTGGCACTGGGTGCCAACCTCATGAACCAGACCAAAGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CCA 72 bp | AACACTGGCTTAGGTGTCTTTAAGGAAACCGGATGCTaGTCCTGGGCTACAATCCGTACCAGGCGCTGTACA | + |
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Preference number: 6 (lower is better) Translates to: NTGLGVFKETGC*SWATIRTRRCT Trigger: TGTACAGCGCCTGGTACGGATTGTAGCCCAGGACCAGCATCCGGTTTCCTTAAAGACACCTAAGCCAGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS TCA 72 bp | AGCTGGGGCCTCGGAAGTAGTGCCAGCGGATGCCATTaGTCTTGTGCAAGTGCTGATGAACTGAATAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SWGLGSSASGCH*SCASADELNSR Trigger: TCTACTATTCAGTTCATCAGCACTTGCACAAGATCAATGGCATCCGCTGGCACTACTTCCGAGGCCCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS GCA 72 bp | GTGGACAGTGAGTTCTCCAGCATTTGGGTCTTCATGTaGAATGTCTGGTTTAGGACCTGTGCCTCCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VDSEFSSIWVFM*NVWFRTCASTA Trigger: TGCTGTGGAGGCACAGGTCCTAAACCAGACATTGCACATGAAGACCCAAATGCTGGAGAACTCACTGTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS TCA 72 bp | CCACAGGCATCAAACCACCACCCTCCAGACAGCATCTaGGCACATTTACACATGCAGTTATCATTGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: PQASNHHPPDSI*AHLHMQLSLSM Trigger: CATGGACAATGATAACTGCATGTGTAAATGTGCTCAGATGCTGTCTGGAGGGTGGTGGTTTGATGCCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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| CDS CCA 72 bp | TTACCAAAACCCTCTTTGTATTCTTCCCAGGTCCTCTaGAAATTTACGCTTCCATCCTCCCGGTGCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: LPKPSLYSSQVL*KFTLPSSRCWM Trigger: CATCCAGCACCGGGAGGATGGAAGCGTAAATTTCCAGAGGACCTGGGAAGAATACAAAGAGGGTTTTGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028955.6 |
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