Pregenerated sensors for ANGPT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031465Ensembl transcript IDs: ENSMUST00000033846.7
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTGGTCAAAAGGCAGGGACAGAGTTCTTCACTCTGGAGTTAGCTaGCAGGAAGTGAACGTGGCAGAGGAGAAGAGCGCCTTGGCTACC | + |
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Preference number: 1 (lower is better) Translates to: QWSKGRDRVLHSGVS*QEVNVAEEKSALAT Trigger: GGTAGCCAAGGCGCTCTTCTCCTCTGCCACGTTCACTTCCTGCCAGCTAACTCCAGAGTGAAGAACTCTGTCCCTGCCTTTTGACCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR TCA 90 bp | CCACGGAACATTCTTCCCTGTGACAGAGTCTGCACGCTGTCCTTCTaGTCCTCAGCCACAACCTTCCCAGAAGTGTTTCTCCAGACTGCA | + |
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Preference number: 1 (lower is better) Translates to: PRNILPCDRVCTLSF*SSATTFPEVFLQTA Trigger: TGCAGTCTGGAGAAACACTTCTGGGAAGGTTGTGGCTGAGGATCAGAAGGACAGCGTGCAGACTCTGTCACAGGGAAGAATGTTCCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR GCA 90 bp | AAGGCTACAGGAGAAATTGCACTAGTGCTCTGTACAAGTGTTCATTaGTGCAGAGGCCACTCTGCAGGCTTAGGAGGGTTAGAACAGAAG | + |
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Preference number: 1 (lower is better) Translates to: KATGEIALVLCTSVH*CRGHSAGLGGLEQK Trigger: CTTCTGTTCTAACCCTCCTAAGCCTGCAGAGTGGCCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCCTGTAGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR TCA 90 bp | ACTTACGGGAGTGAAATAACTTTATGGCTGGGTGTCACTACAACATaGGGAACTGTGTTACAGTGTCTCAGCATACGAAGGTTGAGAACC | + |
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Preference number: 1 (lower is better) Translates to: TYGSEITLWLGVTTT*GTVLQCLSIRRLRT Trigger: GGTTCTCAACCTTCGTATGCTGAGACACTGTAACACAGTTCCTCATGTTGTAGTGACACCCAGCCATAAAGTTATTTCACTCCCGTAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR CCA 90 bp | CGAGCTGTGAATGTATTCACTCTAGAAACCGTGCTTAGAGGAATGTaGTCCCAAGATTTATCTGCACCATCTAAGTGTTCTGTTTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: RAVNVFTLETVLRGM*SQDLSAPSKCSVFQ Trigger: CTGGAAAACAGAACACTTAGATGGTGCAGATAAATCTTGGGACCACATTCCTCTAAGCACGGTTTCTAGAGTGAATACATTCACAGCTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR GCA 90 bp | TCAGCCTGTGGGCAGAGACCTTTTGGGGTCACATATCAGCTATCCTaGAATCAGATACTTACATCACTATTCATAACAGTAGCAAACTTA | + |
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Preference number: 1 (lower is better) Translates to: SACGQRPFGVTYQLS*NQILTSLFITVANL Trigger: TAAGTTTGCTACTGTTATGAATAGTGATGTAAGTATCTGATTGCAGGATAGCTGATATGTGACCCCAAAAGGTCTCTGCCCACAGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR TCA 90 bp | GTGTTGTTTTCAAATGAACATGTAAAGCACCCAAGAGGAAAACAATaGATGTGTGCTTCTCCAGATGATAACCTGTGCCCACCACTTAGA | + |
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Preference number: 1 (lower is better) Translates to: VLFSNEHVKHPRGKQ*MCASPDDNLCPPLR Trigger: TCTAAGTGGTGGGCACAGGTTATCATCTGGAGAAGCACACATTCATTGTTTTCCTCTTGGGTGCTTTACATGTTCATTTGAAAACAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR TCA 90 bp | CAGATACTTACATCACTATTCATAACAGTAGCAAACTTACGGGAGTaGAATAACTTTATGGCTGGGTGTCACTACAACATGAGGAACTGT | + |
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Preference number: 1 (lower is better) Translates to: QILTSLFITVANLRE*NNFMAGCHYNMRNC Trigger: ACAGTTCCTCATGTTGTAGTGACACCCAGCCATAAAGTTATTTCACTCCCGTAAGTTTGCTACTGTTATGAATAGTGATGTAAGTATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR GCA 90 bp | AACATGGCGCTTATTTGGTGGTTATTCCAGAGATGTGGGCATTTTTaGCATATAGTAAATAGTAGCCAGCCATTAAAAACTAAGCCATCA | + |
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Preference number: 1 (lower is better) Translates to: NMALIWWLFQRCGHF*HIVNSSQPLKTKPS Trigger: TGATGGCTTAGTTTTTAATGGCTGGCTACTATTTACTATATGGCAAAAATGCCCACATCTCTGGAATAACCACCAAATAAGCGCCATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGAGATGGGTTAAGGCGTTGGTTCTCAGCCTGTGGGCAGAGACCTTTTGGTCCCTGGATACTGGCTaGCACAGTGCGAGGACACGG | + |
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Preference number: 2 (lower is better) Translates to: ERRWVKALVLSLWAETFWSLDTG*HSARTR Trigger: CCGTGTCCTCGCACTGTGGCAGCCAGTATCCAGGGA...CCAAAAGGTCTCTGCCCACAGGCTGAGAACCAACGCCTTAACCCATCTCCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR TCA 90 bp | CAGCCACAACCTTCCCAGAAGTGTTTCTCCAGACTGCAGTGCCTTTGGTTGGTTCCCAGGAGCACTTCCTaGTGTGGAAAGGGGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: QPQPSQKCFSRLQCLWLVPRSTS*CGKGLL Trigger: TAGCAGCCCCTTTCCACATCAGGAAGTGCTCCTGGG...AACCAACCAAAGGCACTGCAGTCTGGAGAAACACTTCTGGGAAGGTTGTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR CCA 90 bp | AGCGCCTTGGCTACCCCGAGTCTGTGGATTGACCAGAGAACACACCAAGGCTGTGAGCACTTCCTGATGTaGAAAGGGGCTGCTATGCAT | + |
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Preference number: 2 (lower is better) Translates to: SALATPSLWIDQRTHQGCEHFLM*KGAAMH Trigger: ATGCATAGCAGCCCCTTTCCACATCAGGAAGTGCTC...ACAGCCTTGGTGTGTTCTCTGGTCAATCCACAGACTCGGGGTAGCCAAGGCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR CAA 90 bp | CCACCCCCAGGAGCACTTCCTGATGTGGAAAGGGGCTGCTATGCATaGGTGTCTCTCAGTGCCTTGGAGTTAATCTTTGGATGCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: PPPGALPDVERGCYA*VSLSALELIFGCSK Trigger: CTTGCTGCATCCAAAGATTAACTCCAAGGCACTGAGAGACACCAATGCATAGCAGCCCCTTTCCACATCAGGAAGTGCTCCTGGGGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR CAA 90 bp | CCAGAGAACACACCAAGGCTGTGTGAAAGGAGATGGGTTAAGGCGTaGGTTCTCAGCCTGTGGGCAGAGACCTTTTGGGGTCACATATCA | + |
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Preference number: 2 (lower is better) Translates to: PENTPRLCERRWVKA*VLSLWAETFWGHIS Trigger: TGATATGTGACCCCAAAAGGTCTCTGCCCACAGGCTGAGAACCAACGCCTTAACCCATCTCCTTTCACACAGCCTTGGTGTGTTCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTCTTCACTCTGGAGTTAGCTGGCAGGAAGTGAACGTGGCAGAGGAGAAGTTGGTTCTCAGCCTGTaGGCAGAGACCTTTTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: RVLHSGVSWQEVNVAEEKLVLSL*AETFWG Trigger: ACCCCAAAAGGTCTCTGCCCACAGGCTGAGAACCAA...CTTCTCCTCTGCCACGTTCACTTCCTGCCAGCTAACTCCAGAGTGAAGAACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR CAA 90 bp | GAAGGCTACAGGAGAAATTGCACTAGTGCTCTGTACAAGTGTTCATaGCTGCAGAGGCCACTCTGCAGGCTTAGGAGGGTTAGAACAGAA | + |
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Preference number: 2 (lower is better) Translates to: EGYRRNCTSALYKCS*LQRPLCRLRRVRTE Trigger: TTCTGTTCTAACCCTCCTAAGCCTGCAGAGTGGCCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCCTGTAGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR TCA 90 bp | AGCGCCTTGGCTACCCCGAGTCTGTGGATTGACCAGAGAACACACCAAGGCTGTCGAAGTTCTTCTTCTTaGAACAGCATTTTCGTCATT | + |
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Preference number: 2 (lower is better) Translates to: SALATPSLWIDQRTHQGCRSSSS*NSIFVI Trigger: AATGACGAAAATGCTGTTTCAAGAAGAAGAACTTCG...ACAGCCTTGGTGTGTTCTCTGGTCAATCCACAGACTCGGGGTAGCCAAGGCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCTGTGGGCAGAGACCTTTTGGGGTCACATATCAGCTATCCTGCAATCAGGGTGTCACTACAACATaGGGAACTGTGTTACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: SACGQRPFGVTYQLSCNQGVTTT*GTVLQC Trigger: ACACTGTAACACAGTTCCTCATGTTGTAGTGACACC...CTGATTGCAGGATAGCTGATATGTGACCCCAAAAGGTCTCTGCCCACAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCTGTGGGCAGAGACCTTTTGGGGTCACATATCAGCTATCCTGCAATCAGCCAAGAGGAAAACAATaGATGTGTGCTTCTCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: SACGQRPFGVTYQLSCNQPRGKQ*MCASPD Trigger: ATCTGGAGAAGCACACATTCATTGTTTTCCTCTTGG...CTGATTGCAGGATAGCTGATATGTGACCCCAAAAGGTCTCTGCCCACAGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGAGATGGGTTAAGGCGTTGGTTCTCAGCCTGTGGGCAGAGACCTTTTGGCTTGGAGTTAATCTTTaGATGCAGCAAGTTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: ERRWVKALVLSLWAETFWLGVNL*MQQVLL Trigger: CAGAAGAACTTGCTGCATCCAAAGATTAACTCCAAG...CCAAAAGGTCTCTGCCCACAGGCTGAGAACCAACGCCTTAACCCATCTCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR CCA 90 bp | AAAATAGTACAGTCTCCGCATTCACCAACATGGCGCTTATTTGGTGGTTATTCCCCACTTAGAAGTCCCTaGATACTGGCTGCCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: KIVQSPHSPTWRLFGGYSPLRSP*ILAATV Trigger: CACTGTGGCAGCCAGTATCCAGGGACTTCTAAGTGG...GGAATAACCACCAAATAAGCGCCATGTTGGTGAATGCGGAGACTGTACTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR CCA 90 bp | TTAAGGCGTTGGTTCTCAGCCTGTGGGCAGAGACCTTTTGGGGTCACATATCAGGTTATTCCAGAGATGTaGGCATTTTTGCCATATAGT | + |
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Preference number: 2 (lower is better) Translates to: LRRWFSACGQRPFGVTYQVIPEM*AFLPYS Trigger: ACTATATGGCAAAAATGCCCACATCTCTGGAATAAC...CTGATATGTGACCCCAAAAGGTCTCTGCCCACAGGCTGAGAACCAACGCCTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR TCA 90 bp | CTTATTTGGTGGTTATTCCAGAGATGTGGGCATTTTTGCCATATAGTAAATAGTTGCACGCTGTCCTTCTaGTCCTCAGCCACAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: LIWWLFQRCGHFCHIVNSCTLSF*SSATTF Trigger: GAAGGTTGTGGCTGAGGATCAGAAGGACAGCGTGCA...ACTATTTACTATATGGCAAAAATGCCCACATCTCTGGAATAACCACCAAATAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR TCA 90 bp | GGCTACAGGAGAAATTGCACTAGTGCTCTGTACAAGTGTTCATTGCTGCAGAGGTGTGTTGTTTTCAAATaGACATGTAAAGCACCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GYRRNCTSALYKCSLLQRCVVFK*TCKAPK Trigger: CTTGGGTGCTTTACATGTTCATTTGAAAACAACACA...CCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCCTGTAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR CCA 90 bp | CTTATTTGGTGGTTATTCCAGAGATGTGGGCATTTTTGCCATATAGTAAATAGTGGGGCTGCTATGCATTaGTGTCTCTCAGTGCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LIWWLFQRCGHFCHIVNSGAAMH*CLSVPW Trigger: CCAAGGCACTGAGAGACACCAATGCATAGCAGCCCC...ACTATTTACTATATGGCAAAAATGCCCACATCTCTGGAATAACCACCAAATAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR TCA 90 bp | CTTATTTGGTGGTTATTCCAGAGATGTGGGCATTTTTGCCATATAGTAAATAGTACGGCCTTGTCATTGTaGCAGCCGAGCTGTGAATGT | + |
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Preference number: 2 (lower is better) Translates to: LIWWLFQRCGHFCHIVNSTALSL*QPSCEC Trigger: ACATTCACAGCTCGGCTGTCACAATGACAAGGCCGT...ACTATTTACTATATGGCAAAAATGCCCACATCTCTGGAATAACCACCAAATAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR GCA 90 bp | CTTATTTGGTGGTTATTCCAGAGATGTGGGCATTTTTGCCATATAGTAAATAGTGGAAAGGGGCTGCTATaGATTGGTGTCTCTCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: LIWWLFQRCGHFCHIVNSGKGLL*IGVSQC Trigger: GCACTGAGAGACACCAATGCATAGCAGCCCCTTTCC...ACTATTTACTATATGGCAAAAATGCCCACATCTCTGGAATAACCACCAAATAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGCAATCAGATACTTACATCACTATTCATAACAGTAGCAAACTTACGGGATGTACAAGTGTTCATTaGTGCAGAGGCCACTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: ILQSDTYITIHNSSKLTGCTSVH*CRGHSA Trigger: TGCAGAGTGGCCTCTGCAGCAATGAACACTTGTACA...TCCCGTAAGTTTGCTACTGTTATGAATAGTGATGTAAGTATCTGATTGCAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR CCA 72 bp | CCAGATGATAACCTGTGCCCACCACTTAGAAGTCCCTaGATACTGGCTGCCACAGTGCGAGGACACGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: PDDNLCPPLRSP*ILAATVRGHGL Trigger: AAGGCCGTGTCCTCGCACTGTGGCAGCCAGTATCCAGGGACTTCTAAGTGGTGGGCACAGGTTATCATCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR TCA 72 bp | ACAGAGTTCTTCACTCTGGAGTTAGCTGGCAGGAAGTaGACGTGGCAGAGGAGAAGAGCGCCTTGGCTACCC | + |
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Preference number: 3 (lower is better) Translates to: TEFFTLELAGRK*TWQRRRAPWLP Trigger: GGGTAGCCAAGGCGCTCTTCTCCTCTGCCACGTTCACTTCCTGCCAGCTAACTCCAGAGTGAAGAACTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR GCA 72 bp | CCACCCCCAGGAGCACTTCCTGATGTGGAAAGGGGCTaGTATGCATTGGTGTCTCTCAGTGCCTTGGAGTTA | + |
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Preference number: 3 (lower is better) Translates to: PPPGALPDVERG*YALVSLSALEL Trigger: TAACTCCAAGGCACTGAGAGACACCAATGCATAGCAGCCCCTTTCCACATCAGGAAGTGCTCCTGGGGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR CCA 72 bp | CACCAAGGCTGTGTGAAAGGAGATGGGTTAAGGCGTTaGTTCTCAGCCTGTGGGCAGAGACCTTTTGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: HQGCVKGDGLRR*FSACGQRPFGV Trigger: GACCCCAAAAGGTCTCTGCCCACAGGCTGAGAACCAACGCCTTAACCCATCTCCTTTCACACAGCCTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR CCA 72 bp | AAAGGCAGGGACAGAGTTCTTCACTCTGGAGTTAGCTaGCAGGAAGTGAACGTGGCAGAGGAGAAGAGCGCC | + |
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Preference number: 3 (lower is better) Translates to: KGRDRVLHSGVS*QEVNVAEEKSA Trigger: GGCGCTCTTCTCCTCTGCCACGTTCACTTCCTGCCAGCTAACTCCAGAGTGAAGAACTCTGTCCCTGCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR TCA 72 bp | TGGCTGCCACAGTGCGAGGACACGGCCTTGTCATTGTaGCAGCCGAGCTGTGAATGTATTCACTCTAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: WLPQCEDTALSL*QPSCECIHSRN Trigger: GTTTCTAGAGTGAATACATTCACAGCTCGGCTGTCACAATGACAAGGCCGTGTCCTCGCACTGTGGCAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR CCA 72 bp | CCTTCCCAGAAGTGTTTCTCCAGACTGCAGTGCCTTTaGTTGGTTAGCGGTGCAGGCTTAAGTGATGCGCTT | + |
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Preference number: 3 (lower is better) Translates to: PSQKCFSRLQCL*LVSGAGLSDAL Trigger: AAGCGCATCACTTAAGCCTGCACCGCTAACCAACCAAAGGCACTGCAGTCTGGAGAAACACTTCTGGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTGTGACAGAGTCTGCACGCTGTCCTTCTGATCCTCAGCCACAACCTTCCGTGTCTCTCAGTGCCTaGGAGTTAATCTTTGGATGC | + |
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Preference number: 3 (lower is better) Translates to: FPVTESARCPSDPQPQPSVSLSA*ELIFGC Trigger: GCATCCAAAGATTAACTCCAAGGCACTGAGAGACAC...GGAAGGTTGTGGCTGAGGATCAGAAGGACAGCGTGCAGACTCTGTCACAGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR TCA 72 bp | ATTCTTCCCTGTGACAGAGTCTGCACGCTGTCCTTCTaGTCCTCAGCCACAACCTTCCCAGAAGTGTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: ILPCDRVCTLSF*SSATTFPEVFL Trigger: GAGAAACACTTCTGGGAAGGTTGTGGCTGAGGATCAGAAGGACAGCGTGCAGACTCTGTCACAGGGAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR GCA 72 bp | GCTCTGTACAAGTGTTCATTGCTGCAGAGGCCACTCTaGAGGCTTAGGAGGGTTAGAACAGAAGGAGTTAAG | + |
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Preference number: 3 (lower is better) Translates to: ALYKCSLLQRPL*RLRRVRTEGVK Trigger: CTTAACTCCTTCTGTTCTAACCCTCCTAAGCCTGCAGAGTGGCCTCTGCAGCAATGAACACTTGTACAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR GCA 72 bp | GGAGAAATTGCACTAGTGCTCTGTACAAGTGTTCATTaGTGCAGAGGCCACTCTGCAGGCTTAGGAGGGTTA | + |
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Preference number: 3 (lower is better) Translates to: GEIALVLCTSVH*CRGHSAGLGGL Trigger: TAACCCTCCTAAGCCTGCAGAGTGGCCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR CCA 72 bp | AAGGCGTTGGTTCTCAGCCTGTGGGCAGAGACCTTTTaGGGTCACATATCAGCTATCCTGCAATCAGATACT | + |
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Preference number: 3 (lower is better) Translates to: KALVLSLWAETF*GHISAILQSDT Trigger: AGTATCTGATTGCAGGATAGCTGATATGTGACCCCAAAAGGTCTCTGCCCACAGGCTGAGAACCAACGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR GCA 72 bp | GAAATTGCACTAGTGCTCTGTACAAGTGTTCATTGCTaGAGAGGCCACTCTGCAGGCTTAGGAGGGTTAGAA | + |
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Preference number: 3 (lower is better) Translates to: EIALVLCTSVHC*RGHSAGLGGLE Trigger: TTCTAACCCTCCTAAGCCTGCAGAGTGGCCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR CAA 90 bp | GTTGGTTCTCAGCCTGTGGGCAGAGACCTTTTGGGGTCACATATCAGCTATCCTTGTGAGCAGGACATTTaGGCTTTACAGTCTGAAACA | + |
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Preference number: 3 (lower is better) Translates to: VGSQPVGRDLLGSHISYPCEQDI*ALQSET Trigger: TGTTTCAGACTGTAAAGCCAAAATGTCCTGCTCACA...AGGATAGCTGATATGTGACCCCAAAAGGTCTCTGCCCACAGGCTGAGAACCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR GCA 72 bp | TGTGGAAAGGGGCTGCTATGCATTGGTGTCTCTCAGTaGCTTGGAGTTAATCTTTGGATGCAGCAAGTTCTT | + |
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Preference number: 3 (lower is better) Translates to: CGKGLLCIGVSQ*LGVNLWMQQVL Trigger: AAGAACTTGCTGCATCCAAAGATTAACTCCAAGGCACTGAGAGACACCAATGCATAGCAGCCCCTTTCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR GCA 72 bp | GATGGACAGACAGACAAGGAAGGCTACAGGAGAAATTaGACTAGTGCTCTGTACAAGTGTTCATTGCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: DGQTDKEGYRRN*TSALYKCSLLQ Trigger: CTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCCTGTAGCCTTCCTTGTCTGTCTGTCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR-3UTR CAA 90 bp | GGCTACAGGAGAAATTGCACTAGTGCTCTGTACAAGTGTTCATTGCTGCAGAGGGCGAAGTTCTTCTTCTaGAAACAGCATTTTCGTCAT | + |
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Preference number: 3 (lower is better) Translates to: GYRRNCTSALYKCSLLQRAKFFF*KQHFRH Trigger: ATGACGAAAATGCTGTTTCAAGAAGAAGAACTTCGC...CCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCCTGTAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR TCA 72 bp | AGTGAAATAACTTTATGGCTGGGTGTCACTACAACATaGGGAACTGTGTTACAGTGTCTCAGCATACGAAGG | + |
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Preference number: 3 (lower is better) Translates to: SEITLWLGVTTT*GTVLQCLSIRR Trigger: CCTTCGTATGCTGAGACACTGTAACACAGTTCCTCATGTTGTAGTGACACCCAGCCATAAAGTTATTTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR GCA 72 bp | GGGCAGAGACCTTTTGGGGTCACATATCAGCTATCCTaGAATCAGATACTTACATCACTATTCATAACAGTA | + |
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Preference number: 3 (lower is better) Translates to: GQRPFGVTYQLS*NQILTSLFITV Trigger: TACTGTTATGAATAGTGATGTAAGTATCTGATTGCAGGATAGCTGATATGTGACCCCAAAAGGTCTCTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR CCA 72 bp | CTAGGGGTATCTGGTTACATTGTGAGCAGGACATTTTaGCTTTACAGTCTGAAACACTTTCAGCTTGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: LGVSGYIVSRTF*LYSLKHFQLVS Trigger: ACTAACAAGCTGAAAGTGTTTCAGACTGTAAAGCCAAAATGTCCTGCTCACAATGTAACCAGATACCCCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| 3UTR TCA 72 bp | ACATCACTATTCATAACAGTAGCAAACTTACGGGAGTaGAATAACTTTATGGCTGGGTGTCACTACAACATG | + |
|
Preference number: 3 (lower is better) Translates to: TSLFITVANLRE*NNFMAGCHYNM Trigger: CATGTTGTAGTGACACCCAGCCATAAAGTTATTTCACTCCCGTAAGTTTGCTACTGTTATGAATAGTGATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| 3UTR GCA 72 bp | CTTATTTGGTGGTTATTCCAGAGATGTGGGCATTTTTaGCATATAGTAAATAGTAGCCAGCCATTAAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: LIWWLFQRCGHF*HIVNSSQPLKT Trigger: AGTTTTTAATGGCTGGCTACTATTTACTATATGGCAAAAATGCCCACATCTCTGGAATAACCACCAAATAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CCA 90 bp | AGCGCCTTGGCTACCCCGAGTCTGTGGATTGACCAGAGAACACACCAAGGCTGTCCCTCTGCACGGCATTaGACATGTAGGGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SALATPSLWIDQRTHQGCPSARH*TCRGWR Trigger: CCTCCAGCCCCTACATGTCCAATGCCGTGCAGAGGG...ACAGCCTTGGTGTGTTCTCTGGTCAATCCACAGACTCGGGGTAGCCAAGGCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR GCA 90 bp | TTCAGTCTGGTACACACAGACCCTCCCCACCCCCAGGAGCACTTCCTGATGTGGTGTAGCTGCTCGCTGTaGTTGCCCTCCATGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLVHTDPPHPQEHFLMWCSCSL*LPSMSR Trigger: TCTGGACATGGAGGGCAAGCACAGCGAGCAGCTACA...CCACATCAGGAAGTGCTCCTGGGGGTGGGGAGGGTCTGTGTGTACCAGACTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR GCA 90 bp | AGCGCCTTGGCTACCCCGAGTCTGTGGATTGACCAGAGAACACACCAAGGCTGTATGTTCTCCAGCACCTaGAGCCTTTGCACTGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SALATPSLWIDQRTHQGCMFSST*SLCTES Trigger: CGACTCAGTGCAAAGGCTGCAGGTGCTGGAGAACAT...ACAGCCTTGGTGTGTTCTCTGGTCAATCCACAGACTCGGGGTAGCCAAGGCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CCA 90 bp | AGCGCCTTGGCTACCCCGAGTCTGTGGATTGACCAGAGAACACACCAAGGCTGTCCGAGCTCTTGGAGTTaGGTGATGACATCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SALATPSLWIDQRTHQGCPSSWS*VMTSWS Trigger: TGACCATGATGTCATCACCCAACTCCAAGAGCTCGG...ACAGCCTTGGTGTGTTCTCTGGTCAATCCACAGACTCGGGGTAGCCAAGGCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| 3UTR CAA 72 bp | ACACCAAGGCTGTGTGAAAGGAGATGGGTTAAGGCGTaGGTTCTCAGCCTGTGGGCAGAGACCTTTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPRLCERRWVKA*VLSLWAETFWG Trigger: ACCCCAAAAGGTCTCTGCCCACAGGCTGAGAACCAACGCCTTAACCCATCTCCTTTCACACAGCCTTGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCTTCACTCTGGAGTTAGCTGGCAGGAAGTGAACGTGGCAGAGGAGAAGGTTGGAAGGACCACATaGGTCAAACCACCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVLHSGVSWQEVNVAEEKVGRTT*VKPPAS Trigger: GGAGGCTGGTGGTTTGACGCATGTGGTCCTTCCAAC...CTTCTCCTCTGCCACGTTCACTTCCTGCCAGCTAACTCCAGAGTGAAGAACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CCA 90 bp | TTCAGTCTGGTACACACAGACCCTCCCCACCCCCAGGAGCACTTCCTGATGTGGACTGTCCATTCAAGTTaGAAGGACCACATGCGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLVHTDPPHPQEHFLMWTVHSS*KDHMRQ Trigger: TTGACGCATGTGGTCCTTCCAACTTGAATGGACAGT...CCACATCAGGAAGTGCTCCTGGGGGTGGGGAGGGTCTGTGTGTACCAGACTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR GCA 90 bp | GTTGGTTCTCAGCCTGTGGGCAGAGACCTTTTGGGGTCACATATCAGCTATCCTTCAATGACAGAGCTCTaGTTGGACACCAGCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGSQPVGRDLLGSHISYPSMTEL*LDTSTW Trigger: CCAGGTGCTGGTGTCCAAGCAGAGCTCTGTCATTGA...AGGATAGCTGATATGTGACCCCAAAAGGTCTCTGCCCACAGGCTGAGAACCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCTTCACTCTGGAGTTAGCTGGCAGGAAGTGAACGTGGCAGAGGAGAAGGGGAGACAAACTCATTaGCCAGCCAGTACTCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVLHSGVSWQEVNVAEEKGRQTH*PASTLP Trigger: TGGGAGAGTACTGGCTGGGCAATGAGTTTGTCTCCC...CTTCTCCTCTGCCACGTTCACTTCCTGCCAGCTAACTCCAGAGTGAAGAACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CCA 90 bp | TGGTTGGTTAGCGGTGCAGGCTTAAGTGATGCGCTTCAGTCTGGTACACACAGACCTTCTGCTCCTTCATaGACTGTAGCTGCTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLVSGAGLSDALQSGTHRPSAPS*TVAARC Trigger: ACAGCGAGCAGCTACAGTCCATGAAGGAGCAGAAGG...TCTGTGTGTACCAGACTGAAGCGCATCACTTAAGCCTGCACCGCTAACCAACCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR TCA 90 bp | CAGCCACAACCTTCCCAGAAGTGTTTCTCCAGACTGCAGTGCCTTTGGTTGGTTCACTTCCTGGTTGGCTaGTGCTACTTATTTTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QPQPSQKCFSRLQCLWLVHFLVG*CYLFCP Trigger: CGGGCAAAATAAGTAGCATCAGCCAACCAGGAAGTG...AACCAACCAAAGGCACTGCAGTCTGGAGAAACACTTCTGGGAAGGTTGTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CCA 90 bp | TCCAGTTATTTACTGCTGAACTCCCACGGAACATTCTTCCCTGTGACAGAGTCTTTGGACACCAGCACCTaGAGCTCGTCCTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSYLLLNSHGTFFPVTESLDTST*SSSFCS Trigger: GGAGCAGAAGGACGAGCTCCAGGTGCTGGTGTCCAA...AGACTCTGTCACAGGGAAGAATGTTCCGTGGGAGTTCAGCAGTAAATAACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGTGGGCAGAGACCTTTTGGGGTCACATATCAGCTATCCTGCAATCAGAGGTGAATCCTGTAGTTaGACTCTTCACCAGCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPVGRDLLGSHISYPAIRGESCS*TLHQRG Trigger: ACCTCGCTGGTGAAGAGTCCAACTACAGGATTCACC...TCTGATTGCAGGATAGCTGATATGTGACCCCAAAAGGTCTCTGCCCACAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR TCA 90 bp | GGCTACAGGAGAAATTGCACTAGTGCTCTGTACAAGTGTTCATTGCTGCAGAGGTCATGCTGCTGCTTCTaGAGGAGCGAGTTGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GYRRNCTSALYKCSLLQRSCCCF*RSELLT Trigger: GGTCAACAACTCGCTCCTTCAGAAGCAGCAGCATGA...CCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCCTGTAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR TCA 90 bp | TTAAGGCGTTGGTTCTCAGCCTGTGGGCAGAGACCTTTTGGGGTCACATATCAGTTTCCGCACAGTCTCTaGAGGTGGTTTGCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRWFSACGQRPFGVTYQFPHSL*RWFALL Trigger: AAGAAGAGCAAACCACCTTCAGAGACTGTGCGGAAA...CTGATATGTGACCCCAAAAGGTCTCTGCCCACAGGCTGAGAACCAACGCCTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR TCA 90 bp | AAAATAGTACAGTCTCCGCATTCACCAACATGGCGCTTATTTGGTGGTTATTCCTCATGGTTGTGGCCTTaGGCGAGTAGCCGGACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KIVQSPHSPTWRLFGGYSSWLWP*ASSRTP Trigger: AGGGGTCCGGCTACTCGCTCAAGGCCACAACCATGA...GGAATAACCACCAAATAAGCGCCATGTTGGTGAATGCGGAGACTGTACTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCTTCACTCTGGAGTTAGCTGGCAGGAAGTGAACGTGGCAGAGGAGAAGACAGCTGTCTGGTTCTaGACCACATTCTGTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RVLHSGVSWQEVNVAEEKTAVWF*TTFCWI Trigger: GATCCAACAGAATGTGGTGCAGAACCAGACAGCTGT...CTTCTCCTCTGCCACGTTCACTTCCTGCCAGCTAACTCCAGAGTGAAGAACTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CCA 90 bp | GGCTACAGGAGAAATTGCACTAGTGCTCTGTACAAGTGTTCATTGCTGCAGAGGCCATCTTCTCGGTGTTaGATGACTGTCCACCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GYRRNCTSALYKCSLLQRPSSRC*MTVHPP Trigger: AGGAGGGTGGACAGTCATCCAACACCGAGAAGATGG...CCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCCTGTAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| 3UTR CAA 72 bp | GGAGCACTTCCTGATGTGGAAAGGGGCTGCTATGCATaGGTGTCTCTCAGTGCCTTGGAGTTAATCTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GALPDVERGCYA*VSLSALELIFG Trigger: TCCAAAGATTAACTCCAAGGCACTGAGAGACACCAATGCATAGCAGCCCCTTTCCACATCAGGAAGTGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| 3UTR CAA 72 bp | AGGAGAAATTGCACTAGTGCTCTGTACAAGTGTTCATaGCTGCAGAGGCCACTCTGCAGGCTTAGGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRNCTSALYKCS*LQRPLCRLRRV Trigger: AACCCTCCTAAGCCTGCAGAGTGGCCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| 3UTR CAA 72 bp | GAAAGGGGCTGCTATGCATTGGTGTCTCTCAGTGCCTaGGAGTTAATCTTTGGATGCAGCAAGTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERGCYALVSLSA*ELIFGCSKFFW Trigger: CCAGAAGAACTTGCTGCATCCAAAGATTAACTCCAAGGCACTGAGAGACACCAATGCATAGCAGCCCCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR TCA 90 bp | GAGAAGAGCGCCTTGGCTACCCCGAGTCTGTGGATTGACCAGAGAACACACCAATTTATTTCACTGGTCTaGTCCAAAATCTGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EKSALATPSLWIDQRTHQFISLV*SKICFS Trigger: GGAAAAGCAGATTTTGGATCAGACCAGTGAAATAAA...TTGGTGTGTTCTCTGGTCAATCCACAGACTCGGGGTAGCCAAGGCGCTCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR GCA 90 bp | GGCTACAGGAGAAATTGCACTAGTGCTCTGTACAAGTGTTCATTGCTGCAGAGGTTTCCGAGTTTGTGCTaGTGTCTGGTTCAGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GYRRNCTSALYKCSLLQRFPSLC*CLVQQA Trigger: AGCTTGCTGAACCAGACAGCAGCACAAACTCGGAAA...CCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCCTGTAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR GCA 90 bp | TGGTTGGTTAGCGGTGCAGGCTTAAGTGATGCGCTTCAGTCTGGTACACACAGAGCATCTGGGAACACTTaGAGATGCATTTGTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLVSGAGLSDALQSGTHRASGNT*RCICHC Trigger: ACAATGACAAATGCATCTGCAAGTGTTCCCAGATGC...TCTGTGTGTACCAGACTGAAGCGCATCACTTAAGCCTGCACCGCTAACCAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR TCA 90 bp | TTATCTGCACCATCTAAGTGTTCTGTTTTCCAGTTATTTACTGCTGAACTCCCAAAACCACCAGCCTCCTaGGAGCATCTGGGAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSKCSVFQLFTAELPKPPAS*EHLGTL Trigger: AAGTGTTCCCAGATGCTCTCAGGAGGCTGGTGGTTT...TGGGAGTTCAGCAGTAAATAACTGGAAAACAGAACACTTAGATGGTGCAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CCA 90 bp | GGCTACAGGAGAAATTGCACTAGTGCTCTGTACAAGTGTTCATTGCTGCAGAGGAAATCACTTCCTGGTTaGCTGATGCTACTTATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GYRRNCTSALYKCSLLQRKSLPG*LMLLIL Trigger: CAAAATAAGTAGCATCAGCCAACCAGGAAGTGATTT...CCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCCTGTAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR TCA 90 bp | TTATCTGCACCATCTAAGTGTTCTGTTTTCCAGTTATTTACTGCTGAACTCCCAAAAGTTACTGTAGGCTaGGGCCAAGACAAGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSKCSVFQLFTAELPKVTVG*GQDKIP Trigger: TGGGATCTTGTCTTGGCCTCAGCCTACAGTAACTTT...TGGGAGTTCAGCAGTAAATAACTGGAAAACAGAACACTTAGATGGTGCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR GCA 90 bp | TTATCTGCACCATCTAAGTGTTCTGTTTTCCAGTTATTTACTGCTGAACTCCCATCTCTGAAGGTGGTTTaGTCTTCTTTACGGATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAPSKCSVFQLFTAELPSLKVV*SSLRIA Trigger: TGCTATCCGTAAAGAAGAGCAAACCACCTTCAGAGA...TGGGAGTTCAGCAGTAAATAACTGGAAAACAGAACACTTAGATGGTGCAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CCA 90 bp | ATCCTGCAATCAGATACTTACATCACTATTCATAACAGTAGCAAACTTACGGGAGTCTGGTTTAGTACTTaGGCTTCCACATCAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILQSDTYITIHNSSKLTGVWFST*ASTSVS Trigger: ACTGACTGATGTGGAAGCCCAAGTACTAAACCAGAC...TCCCGTAAGTTTGCTACTGTTATGAATAGTGATGTAAGTATCTGATTGCAGGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CCA 90 bp | ATCCTGCAATCAGATACTTACATCACTATTCATAACAGTAGCAAACTTACGGGAGTAGAAATAGAATGTTaGAGAAGCTGCAGCTCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILQSDTYITIHNSSKLTGVEIEC*RSCSSS Trigger: ACTCGAGCTGCAGCTTCTCCAACATTCTATTTCTAC...TCCCGTAAGTTTGCTACTGTTATGAATAGTGATGTAAGTATCTGATTGCAGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS CCA 90 bp | AGTCGAGGGGTGCATCCCTCTGCACGGCATTGGACATGTAGGGGCTaGAGGAAGATCGGCAGCTGTCGGTCTCCGGCAGCAGGAACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SRGVHPSARHWTCRG*RKIGSCRSPAAGTC Trigger: ACACGTTCCTGCTGCCGGAGACCGACAGCTGCCGATCTTCCTCCAGCCCCTACATGTCCAATGCCGTGCAGAGGGATGCACCCCTCGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS CCA 90 bp | GCACTGAGTCGTCGTAGTCGAGGGGTGCATCCCTCTGCACGGCATTaGACATGTAGGGGCTGGAGGAAGATCGGCAGCTGTCGGTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ALSRRSRGVHPSARH*TCRGWRKIGSCRSP Trigger: CGGAGACCGACAGCTGCCGATCTTCCTCCAGCCCCTACATGTCCAATGCCGTGCAGAGGGATGCACCCCTCGACTACGACGACTCAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CAA 90 bp | TTCAGTCTGGTACACACAGACCCTCCCCACCCCCAGGAGCACTTCCTGATGTGGATGACAGAGCTCTGCTaGGACACCAGCACCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSLVHTDPPHPQEHFLMWMTELC*DTSTWS Trigger: GCTCCAGGTGCTGGTGTCCAAGCAGAGCTCTGTCAT...CCACATCAGGAAGTGCTCCTGGGGGTGGGGAGGGTCTGTGTGTACCAGACTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS CCA 90 bp | TTCTCCAGCTCGTCAATGACAGAGCTCTGCTTGGACACCAGCACCTaGAGCTCGTCCTTCTGCTCCTTCATGGACTGTAGCTGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSSSMTELCLDTST*SSSFCSFMDCSCSL Trigger: CAGCGAGCAGCTACAGTCCATGAAGGAGCAGAAGGACGAGCTCCAGGTGCTGGTGTCCAAGCAGAGCTCTGTCATTGACGAGCTGGAGAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS TCA 90 bp | GTCAGCAAGCTGTTGACGGTCTCCATTAGGTCATGCTGCTGCTTCTaGAGGAGCGAGTTGTTGACCGTGGCTGTCACCAGCTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSKLLTVSIRSCCCF*RSELLTVAVTSFFS Trigger: GGAGAAGAAGCTGGTGACAGCCACGGTCAACAACTCGCTCCTTCAGAAGCAGCAGCATGACCTAATGGAGACCGTCAACAGCTTGCTGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS TCA 90 bp | CCGAGCTCTTGGAGTTGGGTGATGACATCATGGTCAGCAAGCTGTTaGCGGTCTCCATTAGGTCATGCTGCTGCTTCTGAAGGAGCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSWSWVMTSWSASC*RSPLGHAAASEGAS Trigger: ACTCGCTCCTTCAGAAGCAGCAGCATGACCTAATGGAGACCGTCAACAGCTTGCTGACCATGATGTCATCACCCAACTCCAAGAGCTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS TCA 90 bp | GGAGTTGGGGAAGGTCAGTGTGTAGATGCCACTGGTGGTGAGTCCTaGCTTGAAGATTTCCGCACAGTCTCTGAAGGTGGTTTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVGEGQCVDATGGES*LEDFRTVSEGGLLF Trigger: GAAGAGCAAACCACCTTCAGAGACTGTGCGGAAATCTTCAAGTCAGGACTCACCACCAGTGGCATCTACACACTGACCTTCCCCAACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS GCA 90 bp | GCTCGTCCTTCTGCTCCTTCATGGACTGTAGCTGCTCGCTGTGCTTaGCCTCCATGTCCAGAACTTTCTGTTCTAGGAAGCTGTTCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: ARPSAPSWTVAARCA*PPCPELSVLGSCSY Trigger: ATAAGAACAGCTTCCTAGAACAGAAAGTTCTGGACATGGAGGGCAAGCACAGCGAGCAGCTACAGTCCATGAAGGAGCAGAAGGACGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS CCA 90 bp | TGTTGGAGAAGCTGCAGCTCGAGTCTTGTCGTCTGGTTTAGTACTTaGGCTTCCACATCAGTCAGTTTCCGAGTTTGTGCTGCTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CWRSCSSSLVVWFST*ASTSVSFRVCAAVW Trigger: CCAGACAGCAGCACAAACTCGGAAACTGACTGATGTGGAAGCCCAAGTACTAAACCAGACGACAAGACTCGAGCTGCAGCTTCTCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CAA 90 bp | TGGTTGGTTAGCGGTGCAGGCTTAAGTGATGCGCTTCAGTCTGGTACACACAGAATGGTCAGCAAGCTGTaGACGGTCTCCATTAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WLVSGAGLSDALQSGTHRMVSKL*TVSIRS Trigger: TGACCTAATGGAGACCGTCAACAGCTTGCTGACCAT...TCTGTGTGTACCAGACTGAAGCGCATCACTTAAGCCTGCACCGCTAACCAACCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS CCA 90 bp | ACTTGGGCTTCCACATCAGTCAGTTTCCGAGTTTGTGCTGCTGTCTaGTTCAGCAAGCTGGTTCCAATCTCTATCATCACAGCTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TWASTSVSFRVCAAV*FSKLVPISIITAVW Trigger: CCAGACAGCTGTGATGATAGAGATTGGAACCAGCTTGCTGAACCAGACAGCAGCACAAACTCGGAAACTGACTGATGTGGAAGCCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CAA 90 bp | AAAATAGTACAGTCTCCGCATTCACCAACATGGCGCTTATTTGGTGGTTATTCCAGCGAATGCGCCTCGTaGCCTTCCCAGTCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KIVQSPHSPTWRLFGGYSSECAS*PSQSFS Trigger: GCTGAAGGACTGGGAAGGCAACGAGGCGCATTCGCT...GGAATAACCACCAAATAAGCGCCATGTTGGTGAATGCGGAGACTGTACTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CAA 90 bp | GGCTACAGGAGAAATTGCACTAGTGCTCTGTACAAGTGTTCATTGCTGCAGAGGCTGCACCACATTCTGTaGGATCTCCACCATCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GYRRNCTSALYKCSLLQRLHHIL*DLHHLL Trigger: AAGGAGATGGTGGAGATCCAACAGAATGTGGTGCAG...CCTCTGCAGCAATGAACACTTGTACAGAGCACTAGTGCAATTTCTCCTGTAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CAA 90 bp | TCCAGTTATTTACTGCTGAACTCCCACGGAACATTCTTCCCTGTGACAGAGTCTGTGGTGAGTCCTGACTaGAAGATTTCCGCACAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSYLLLNSHGTFFPVTESVVSPD*KISAQS Trigger: AGACTGTGCGGAAATCTTCAAGTCAGGACTCACCAC...AGACTCTGTCACAGGGAAGAATGTTCCGTGGGAGTTCAGCAGTAAATAACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGTGGGCAGAGACCTTTTGGGGTCACATATCAGCTATCCTGCAATCAGACACTTGCAGATGCATTaGTCATTGTCCGAATCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QPVGRDLLGSHISYPAIRHLQMH*SLSESF Trigger: AAAGGATTCGGACAATGACAAATGCATCTGCAAGTG...TCTGATTGCAGGATAGCTGATATGTGACCCCAAAAGGTCTCTGCCCACAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS GCA 90 bp | TTCAGCAAGCTGGTTCCAATCTCTATCATCACAGCTGTCTGGTTCTaGACCACATTCTGTTGGATCTCCACCATCTCCTTCTTCATGTTG | + |
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Preference number: 5 (lower is better) Translates to: FSKLVPISIITAVWF*TTFCWISTISFFML Trigger: CAACATGAAGAAGGAGATGGTGGAGATCCAACAGAATGTGGTGCAGAACCAGACAGCTGTGATGATAGAGATTGGAACCAGCTTGCTGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CCA 90 bp | GTAGAAATAGAATGTTGGAGAAGCTGCAGCTCGAGTCTTGTCGTCTaGTTTAGTACTTGGGCTTCCACATCAGTCAGTTTCCGAGTTTGT | + |
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Preference number: 5 (lower is better) Translates to: VEIECWRSCSSSLVV*FSTWASTSVSFRVC Trigger: ACAAACTCGGAAACTGACTGATGTGGAAGCCCAAGTACTAAACCAGACGACAAGACTCGAGCTGCAGCTTCTCCAACATTCTATTTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS-3UTR CAA 90 bp | ATCCTGCAATCAGATACTTACATCACTATTCATAACAGTAGCAAACTTACGGGAGCCATCTTCTCGGTGTaGGATGACTGTCCACCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ILQSDTYITIHNSSKLTGAIFSV*DDCPPS Trigger: GGAGGGTGGACAGTCATCCAACACCGAGAAGATGGC...TCCCGTAAGTTTGCTACTGTTATGAATAGTGATGTAAGTATCTGATTGCAGGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS-3UTR CAA 90 bp | CAGCCACAACCTTCCCAGAAGTGTTTCTCCAGACTGCAGTGCCTTTGGTTGGTTAAAATCACTTCCTGGTaGGCTGATGCTACTTATTTT | + |
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Preference number: 5 (lower is better) Translates to: QPQPSQKCFSRLQCLWLVKITSW*ADATYF Trigger: AAAATAAGTAGCATCAGCCAACCAGGAAGTGATTTT...AACCAACCAAAGGCACTGCAGTCTGGAGAAACACTTCTGGGAAGGTTGTGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS GCA 90 bp | ATCTGCTTTTCCAATTTGTTGGTAGAAATAGAATGTTGGAGAAGCTaGAGCTCGAGTCTTGTCGTCTGGTTTAGTACTTGGGCTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: ICFSNLLVEIECWRS*SSSLVVWFSTWAST Trigger: TGTGGAAGCCCAAGTACTAAACCAGACGACAAGACTCGAGCTGCAGCTTCTCCAACATTCTATTTCTACCAACAAATTGGAAAAGCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS-3UTR CAA 90 bp | ATCCTGCAATCAGATACTTACATCACTATTCATAACAGTAGCAAACTTACGGGAGGTAGAAATAGAATGTaGGAGAAGCTGCAGCTCGAG | + |
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Preference number: 5 (lower is better) Translates to: ILQSDTYITIHNSSKLTGGRNRM*EKLQLE Trigger: CTCGAGCTGCAGCTTCTCCAACATTCTATTTCTACC...TCCCGTAAGTTTGCTACTGTTATGAATAGTGATGTAAGTATCTGATTGCAGGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CCA 90 bp | GTAGTACCACTTGATACCGTTAAACTTATTTGTATTCTGTTTTTGTaGGTAGTACTGTCCATTCAAGTTGGAAGGACCACATGCGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: VVPLDTVKLICILFL*VVLSIQVGRTTCVK Trigger: TTTGACGCATGTGGTCCTTCCAACTTGAATGGACAGTACTACCCACAAAAACAGAATACAAATAAGTTTAACGGTATCAAGTGGTACTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS GCA 72 bp | AGCGGTGCTGACCGGTCAGCTGGGAGACAAACTCATTaGCCAGCCAGTACTCTCCCAGAGGGCTCCCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SGADRSAGRQTH*PASTLPEGSRS Trigger: GCTTCGGGAGCCCTCTGGGAGAGTACTGGCTGGGCAATGAGTTTGTCTCCCAGCTGACCGGTCAGCACCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CCA 72 bp | GTGCATCCCTCTGCACGGCATTGGACATGTAGGGGCTaGAGGAAGATCGGCAGCTGTCGGTCTCCGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VHPSARHWTCRG*RKIGSCRSPAA Trigger: TGCTGCCGGAGACCGACAGCTGCCGATCTTCCTCCAGCCCCTACATGTCCAATGCCGTGCAGAGGGATGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CCA 72 bp | CGTCGTAGTCGAGGGGTGCATCCCTCTGCACGGCATTaGACATGTAGGGGCTGGAGGAAGATCGGCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RRSRGVHPSARH*TCRGWRKIGSC Trigger: ACAGCTGCCGATCTTCCTCCAGCCCCTACATGTCCAATGCCGTGCAGAGGGATGCACCCCTCGACTACGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CCA 72 bp | ACACCAGCACCTGGAGCTCGTCCTTCTGCTCCTTCATaGACTGTAGCTGCTCGCTGTGCTTGCCCTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: TPAPGARPSAPS*TVAARCACPPC Trigger: ACATGGAGGGCAAGCACAGCGAGCAGCTACAGTCCATGAAGGAGCAGAAGGACGAGCTCCAGGTGCTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 72 bp | CGTCCTCTGGAAGTCCACACTGCCATCTTCTCGGTGTaGGATGACTGTCCACCCTCCTCCACCCACGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RPLEVHTAIFSV*DDCPPSSTHVH Trigger: ATGGACGTGGGTGGAGGAGGGTGGACAGTCATCCAACACCGAGAAGATGGCAGTGTGGACTTCCAGAGGACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS TCA 72 bp | ACCCTCCTCCACCCACGTCCATGTCACAGTAGGCCTTaGTCTCCTCTGTGGAGTTGGGGAAGGTCAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: TLLHPRPCHSRP*SPLWSWGRSVC Trigger: ACACACTGACCTTCCCCAACTCCACAGAGGAGATCAAGGCCTACTGTGACATGGACGTGGGTGGAGGAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS TCA 72 bp | TCTGGAAGTCCACACTGCCATCTTCTCGGTGTTGGATaGCTGTCCACCCTCCTCCACCCACGTCCATGTCAC | + |
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Preference number: 6 (lower is better) Translates to: SGSPHCHLLGVG*LSTLLHPRPCH Trigger: GTGACATGGACGTGGGTGGAGGAGGGTGGACAGTCATCCAACACCGAGAAGATGGCAGTGTGGACTTCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 72 bp | AGCTTCTTCTCCAGCTCGTCAATGACAGAGCTCTGCTaGGACACCAGCACCTGGAGCTCGTCCTTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFFSSSSMTELC*DTSTWSSSFCS Trigger: GGAGCAGAAGGACGAGCTCCAGGTGCTGGTGTCCAAGCAGAGCTCTGTCATTGACGAGCTGGAGAAGAAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS TCA 72 bp | CTGTTGACGGTCTCCATTAGGTCATGCTGCTGCTTCTaGAGGAGCGAGTTGTTGACCGTGGCTGTCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLTVSIRSCCCF*RSELLTVAVTS Trigger: GCTGGTGACAGCCACGGTCAACAACTCGCTCCTTCAGAAGCAGCAGCATGACCTAATGGAGACCGTCAACAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS TCA 72 bp | AGAAATCTGCTGGCCGGATCATCATGGTTGTGGCCTTaGGCGAGTAGCCGGACCCCTTCCAGTAGTACCACT | + |
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Preference number: 6 (lower is better) Translates to: RNLLAGSSWLWP*ASSRTPSSSTT Trigger: AGTGGTACTACTGGAAGGGGTCCGGCTACTCGCTCAAGGCCACAACCATGATGATCCGGCCAGCAGATTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 72 bp | AGCCAGTACTCTCCCAGAGGGCTCCCGAAGCCCTCTTaGTATTCTTTCCACGTCCTCTGGAAGTCCACACTG | + |
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Preference number: 6 (lower is better) Translates to: SQYSPRGLPKPS*YSFHVLWKSTL Trigger: CAGTGTGGACTTCCAGAGGACGTGGAAAGAATACAAAGAGGGCTTCGGGAGCCCTCTGGGAGAGTACTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS GCA 72 bp | TCTGCTCCTTCATGGACTGTAGCTGCTCGCTGTGCTTaGCCTCCATGTCCAGAACTTTCTGTTCTAGGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SAPSWTVAARCA*PPCPELSVLGS Trigger: GCTTCCTAGAACAGAAAGTTCTGGACATGGAGGGCAAGCACAGCGAGCAGCTACAGTCCATGAAGGAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS GCA 72 bp | TCCTTCTGCTCCTTCATGGACTGTAGCTGCTCGCTGTaGTTGCCCTCCATGTCCAGAACTTTCTGTTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: SFCSFMDCSCSL*LPSMSRTFCSR Trigger: CCTAGAACAGAAAGTTCTGGACATGGAGGGCAAGCACAGCGAGCAGCTACAGTCCATGAAGGAGCAGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 90 bp | AGCTCGTCCTTCTGCTCCTTCATGGACTGTAGCTGCTCGCTGTGCTaGCCCTCCATGTCCAGAACTTTCTGTTCTAGGAAGCTGTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: SSSFCSFMDCSCSLC*PSMSRTFCSRKLFL Trigger: TAAGAACAGCTTCCTAGAACAGAAAGTTCTGGACATGGAGGGCAAGCACAGCGAGCAGCTACAGTCCATGAAGGAGCAGAAGGACGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS TCA 72 bp | GAAGGTCAGTGTGTAGATGCCACTGGTGGTGAGTCCTaGCTTGAAGATTTCCGCACAGTCTCTGAAGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: EGQCVDATGGES*LEDFRTVSEGG Trigger: ACCACCTTCAGAGACTGTGCGGAAATCTTCAAGTCAGGACTCACCACCAGTGGCATCTACACACTGACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS TCA 72 bp | TGGAGTTGGGTGATGACATCATGGTCAGCAAGCTGTTaGCGGTCTCCATTAGGTCATGCTGCTGCTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: WSWVMTSWSASC*RSPLGHAAASE Trigger: TTCAGAAGCAGCAGCATGACCTAATGGAGACCGTCAACAGCTTGCTGACCATGATGTCATCACCCAACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CCA 72 bp | GTTTCCGAGTTTGTGCTGCTGTCTGGTTCAGCAAGCTaGTTCCAATCTCTATCATCACAGCTGTCTGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: VSEFVLLSGSAS*FQSLSSQLSGS Trigger: AGAACCAGACAGCTGTGATGATAGAGATTGGAACCAGCTTGCTGAACCAGACAGCAGCACAAACTCGGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CCA 72 bp | GAATGTTGGAGAAGCTGCAGCTCGAGTCTTGTCGTCTaGTTTAGTACTTGGGCTTCCACATCAGTCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: ECWRSCSSSLVV*FSTWASTSVSF Trigger: GAAACTGACTGATGTGGAAGCCCAAGTACTAAACCAGACGACAAGACTCGAGCTGCAGCTTCTCCAACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 72 bp | TCAAACCACCAGCCTCCTGAGAGCATCTGGGAACACTaGCAGATGCATTTGTCATTGTCCGAATCCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SNHQPPESIWEH*QMHLSLSESFV Trigger: CACAAAGGATTCGGACAATGACAAATGCATCTGCAAGTGTTCCCAGATGCTCTCAGGAGGCTGGTGGTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 90 bp | CAGCCTCCTGAGAGCATCTGGGAACACTTGCAGATGCATTTGTCATaGTCCGAATCCTTTGTGCTAAAATCACTTCCTGGTTGGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: QPPESIWEHLQMHLS*SESFVLKSLPGWLM Trigger: CATCAGCCAACCAGGAAGTGATTTTAGCACAAAGGATTCGGACAATGACAAATGCATCTGCAAGTGTTCCCAGATGCTCTCAGGAGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 90 bp | CCACATGCGTCAAACCACCAGCCTCCTGAGAGCATCTGGGAACACTaGCAGATGCATTTGTCATTGTCCGAATCCTTTGTGCTAAAATCA | + |
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Preference number: 6 (lower is better) Translates to: PHASNHQPPESIWEH*QMHLSLSESFVLKS Trigger: TGATTTTAGCACAAAGGATTCGGACAATGACAAATGCATCTGCAAGTGTTCCCAGATGCTCTCAGGAGGCTGGTGGTTTGACGCATGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CCA 72 bp | TCCACATCAGTCAGTTTCCGAGTTTGTGCTGCTGTCTaGTTCAGCAAGCTGGTTCCAATCTCTATCATCACA | + |
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Preference number: 6 (lower is better) Translates to: STSVSFRVCAAV*FSKLVPISIIT Trigger: TGTGATGATAGAGATTGGAACCAGCTTGCTGAACCAGACAGCAGCACAAACTCGGAAACTGACTGATGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 72 bp | GAGAGCATCTGGGAACACTTGCAGATGCATTTGTCATaGTCCGAATCCTTTGTGCTAAAATCACTTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: ESIWEHLQMHLS*SESFVLKSLPG Trigger: ACCAGGAAGTGATTTTAGCACAAAGGATTCGGACAATGACAAATGCATCTGCAAGTGTTCCCAGATGCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 90 bp | TCCAATCTCTATCATCACAGCTGTCTGGTTCTGCACCACATTCTGTaGGATCTCCACCATCTCCTTCTTCATGTTGTCCTGAATGTAATT | + |
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Preference number: 6 (lower is better) Translates to: SNLYHHSCLVLHHIL*DLHHLLLHVVLNVI Trigger: AATTACATTCAGGACAACATGAAGAAGGAGATGGTGGAGATCCAACAGAATGTGGTGCAGAACCAGACAGCTGTGATGATAGAGATTGGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS GCA 72 bp | TCCAATTTGTTGGTAGAAATAGAATGTTGGAGAAGCTaGAGCTCGAGTCTTGTCGTCTGGTTTAGTACTTGG | + |
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Preference number: 6 (lower is better) Translates to: SNLLVEIECWRS*SSSLVVWFSTW Trigger: CCAAGTACTAAACCAGACGACAAGACTCGAGCTGCAGCTTCTCCAACATTCTATTTCTACCAACAAATTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 72 bp | AATCTGCTTTTCCAATTTGTTGGTAGAAATAGAATGTaGGAGAAGCTGCAGCTCGAGTCTTGTCGTCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: NLLFQFVGRNRM*EKLQLESCRLV Trigger: AACCAGACGACAAGACTCGAGCTGCAGCTTCTCCAACATTCTATTTCTACCAACAAATTGGAAAAGCAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 90 bp | CCAGTAGTACCACTTGATACCGTTAAACTTATTTGTATTCTGTTTTaGTGGGTAGTACTGTCCATTCAAGTTGGAAGGACCACATGCGTC | + |
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Preference number: 6 (lower is better) Translates to: PVVPLDTVKLICILF*WVVLSIQVGRTTCV Trigger: GACGCATGTGGTCCTTCCAACTTGAATGGACAGTACTACCCACAAAAACAGAATACAAATAAGTTTAACGGTATCAAGTGGTACTACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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| CDS CAA 72 bp | CCACTTGATACCGTTAAACTTATTTGTATTCTGTTTTaGTGGGTAGTACTGTCCATTCAAGTTGGAAGGACC | + |
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Preference number: 6 (lower is better) Translates to: PLDTVKLICILF*WVVLSIQVGRT Trigger: GGTCCTTCCAACTTGAATGGACAGTACTACCCACAAAAACAGAATACAAATAAGTTTAACGGTATCAAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033846.7 |
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