Pregenerated sensors for ANG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000072115Ensembl transcript IDs: ENSMUST00000069011.9, ENSMUST00000171688.9
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCTATGAGGGCTCGGTACTGGCATaGAGGTCGGGGAGACCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SFFWPLTMNDGTSVLGYEGSVLA*RSGRPS Trigger: GGAGGGTCTCCCCGACCTCCATGCCAGTACCGAGCC...CTCATAGCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | GATAGTTCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCGCAGAGGCTCGGTACTaGCATGGAGGTCGGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: DSSFFWPLTMNDGTSVLGAEARY*HGGRGD Trigger: GTCTCCCCGACCTCCATGCCAGTACCGAGCCTCTGC...GCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGAACTATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | TCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCTATGAGCCCGGCCCTTTGGCTTaGCGTCATGGTGCTGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: SFFWPLTMNDGTSVLGYEPGPLA*RHGAES Trigger: TGACTCAGCACCATGACGCCAAGCCAAAGGGCCGGG...CTCATAGCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR TCA 90 bp | GATAGTTCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCTACCTGGAGTCATCCTaGGCCAGAGTGGGAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: DSSFFWPLTMNDGTSVLGYLESS*ARVGGI Trigger: GATCCCTCCCACTCTGGCTCAGGATGACTCCAGGTA...GCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGAACTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR GCA 90 bp | TCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCTATGAGGGAGACCCTCCTGTGTaGTTGCAAGTGGTGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: SFFWPLTMNDGTSVLGYEGDPPV*LQVVTW Trigger: CCAGGTCACCACTTGCAAGCACACAGGAGGGTCTCC...CTCATAGCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR TCA 90 bp | GATAGTTCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCTGTGCTTGCAAGTGGTaGCCTGGAAGGGAGACTTGC | + |
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Preference number: 4 (lower is better) Translates to: DSSFFWPLTMNDGTSVLGCACKW*PGRETC Trigger: GCAAGTCTCCCTTCCAGGTCACCACTTGCAAGCACA...GCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGAACTATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | TCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCTATGAGCATCCTGAGCCAGAGTaGGAGGGATCACAACCAGAC | + |
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Preference number: 4 (lower is better) Translates to: SFFWPLTMNDGTSVLGYEHPEPE*EGSQPD Trigger: GTCTGGTTGTGATCCCTCCCACTCTGGCTCAGGATG...CTCATAGCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | GATAGTTCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCCATCCTGAGCCAGAGTaGGAGGGATCACAACCAGAC | + |
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Preference number: 4 (lower is better) Translates to: DSSFFWPLTMNDGTSVLGHPEPE*EGSQPD Trigger: GTCTGGTTGTGATCCCTCCCACTCTGGCTCAGGATG...GCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGAACTATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | CTGTGCATTGCAAATCAGGAGACATATGTTTTAGATAGTTCGTTTTTCTGGCCCGGCTCGGTACTGGCATaGAGGTCGGGGAGACCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LCIANQETYVLDSSFFWPGSVLA*RSGRPS Trigger: GGAGGGTCTCCCCGACCTCCATGCCAGTACCGAGCC...GGGCCAGAAAAACGAACTATCTAAAACATATGTCTCCTGATTTGCAATGCACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | CTGTGCATTGCAAATCAGGAGACATATGTTTTAGATAGTTCGTTTTTCTGGCCCGCAGAGGCTCGGTACTaGCATGGAGGTCGGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: LCIANQETYVLDSSFFWPAEARY*HGGRGD Trigger: GTCTCCCCGACCTCCATGCCAGTACCGAGCCTCTGC...GGGCCAGAAAAACGAACTATCTAAAACATATGTCTCCTGATTTGCAATGCACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | TCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCTATGAGGGAATTTTGTGTACCTaGAGTCATCCTGAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: SFFWPLTMNDGTSVLGYEGILCT*SHPEPE Trigger: CTCTGGCTCAGGATGACTCCAGGTACACAAAATTCC...CTCATAGCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | TCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCTATGAGTTGCAAGTGGTGACCTaGAAGGGAGACTTGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: SFFWPLTMNDGTSVLGYELQVVT*KGDLLI Trigger: AATGAGCAAGTCTCCCTTCCAGGTCACCACTTGCAA...CTCATAGCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | GATAGTTCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCTTGCAAGTGGTGACCTaGAAGGGAGACTTGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: DSSFFWPLTMNDGTSVLGLQVVT*KGDLLI Trigger: AATGAGCAAGTCTCCCTTCCAGGTCACCACTTGCAA...GCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGAACTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR GCA 90 bp | CTGTGCATTGCAAATCAGGAGACATATGTTTTAGATAGTTCGTTTTTCTGGCCCGGAGACCCTCCTGTGTaGTTGCAAGTGGTGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: LCIANQETYVLDSSFFWPGDPPV*LQVVTW Trigger: CCAGGTCACCACTTGCAAGCACACAGGAGGGTCTCC...GGGCCAGAAAAACGAACTATCTAAAACATATGTCTCCTGATTTGCAATGCACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | GATAGTTCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCAACGACTCATCGAAGTaGACAGGCAAACCATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: DSSFFWPLTMNDGTSVLGNDSSK*TGKPFS Trigger: TGAGAATGGTTTGCCTGTCCACTTCGATGAGTCGTT...GCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGAACTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR GCA 90 bp | GATAGTTCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCCCTGGAAGGGAGACTTaGTCATTCTTAAGTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: DSSFFWPLTMNDGTSVLGPGRET*SFLSFL Trigger: GAGAAAACTTAAGAATGAGCAAGTCTCCCTTCCAGG...GCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGAACTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR TCA 90 bp | TGGCTTTTGAGACATCTTTATTTCTGTGCATTGCAAATCAGGAGACATATGTTTTACCTGGAGTCATCCTaGGCCAGAGTGGGAGGGATC | + |
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Preference number: 4 (lower is better) Translates to: WLLRHLYFCALQIRRHMFYLESS*ARVGGI Trigger: GATCCCTCCCACTCTGGCTCAGGATGACTCCAGGTA...AAACATATGTCTCCTGATTTGCAATGCACAGAAATAAAGATGTCTCAAAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | CTGTGCATTGCAAATCAGGAGACATATGTTTTAGATAGTTCGTTTTTCTGGCCCAACGACTCATCGAAGTaGACAGGCAAACCATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LCIANQETYVLDSSFFWPNDSSK*TGKPFS Trigger: TGAGAATGGTTTGCCTGTCCACTTCGATGAGTCGTT...GGGCCAGAAAAACGAACTATCTAAAACATATGTCTCCTGATTTGCAATGCACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR TCA 90 bp | TGGCTTTTGAGACATCTTTATTTCTGTGCATTGCAAATCAGGAGACATATGTTTCTCCACAGATGGCCTTaGTGTTGCTCTTGTTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: WLLRHLYFCALQIRRHMFLHRWP*CCSCCH Trigger: ATGGCAACAAGAGCAACATCAAGGCCATCTGTGGAG...AAACATATGTCTCCTGATTTGCAATGCACAGAAATAAAGATGTCTCAAAAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR GCA 90 bp | CTGTGCATTGCAAATCAGGAGACATATGTTTTAGATAGTTCGTTTTTCTGGCCCCCTGGAAGGGAGACTTaGTCATTCTTAAGTTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LCIANQETYVLDSSFFWPPGRET*SFLSFL Trigger: GAGAAAACTTAAGAATGAGCAAGTCTCCCTTCCAGG...GGGCCAGAAAAACGAACTATCTAAAACATATGTCTCCTGATTTGCAATGCACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR TCA 90 bp | TGGCTTTTGAGACATCTTTATTTCTGTGCATTGCAAATCAGGAGACATATGTTTTTGGCGTCATGGTGCTaGGTCAGGAATTTTGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: WLLRHLYFCALQIRRHMFLASWC*VRNFVY Trigger: GTACACAAAATTCCTGACTCAGCACCATGACGCCAA...AAACATATGTCTCCTGATTTGCAATGCACAGAAATAAAGATGTCTCAAAAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CCA 90 bp | CTGTGCATTGCAAATCAGGAGACATATGTTTTAGATAGTTCGTTTTTCTGGCCCTTGCTCTTGTTGCCATaGATAAAGGTGTTGACATCT | + |
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Preference number: 4 (lower is better) Translates to: LCIANQETYVLDSSFFWPLLLLP*IKVLTS Trigger: AGATGTCAACACCTTTATCCATGGCAACAAGAGCAA...GGGCCAGAAAAACGAACTATCTAAAACATATGTCTCCTGATTTGCAATGCACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS GCA 90 bp | GCAGAGGCTCGGTACTGGCATGGAGGTCGGGGAGACCCTCCTGTGTaGTTGCAAGTGGTGACCTGGAAGGGAGACTTGCTCATTCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: AEARYWHGGRGDPPV*LQVVTWKGDLLILK Trigger: CTTAAGAATGAGCAAGTCTCCCTTCCAGGTCACCACTTGCAAGCACACAGGAGGGTCTCCCCGACCTCCATGCCAGTACCGAGCCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS GCA 90 bp | GACAGGCAAACCATTCTCACAGGCAATAACAACATGTCTGAACCCTaGAGAGGCTCGGTACTGGCATGGAGGTCGGGGAGACCCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: DRQTILTGNNNMSEP*RGSVLAWRSGRPSC Trigger: ACAGGAGGGTCTCCCCGACCTCCATGCCAGTACCGAGCCTCTGCAGGGTTCAGACATGTTGTTATTGCCTGTGAGAATGGTTTGCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CCA 90 bp | CCTTTGGCTTGGCGTCATGGTGCTGAGTCAGGAATTTTGTGTACCTaGAGTCATCCTGAGCCAGAGTGGGAGGGATCACAACCAGACCCA | + |
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Preference number: 5 (lower is better) Translates to: PLAWRHGAESGILCT*SHPEPEWEGSQPDP Trigger: TGGGTCTGGTTGTGATCCCTCCCACTCTGGCTCAGGATGACTCCAGGTACACAAAATTCCTGACTCAGCACCATGACGCCAAGCCAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CCA 90 bp | GCTGAGTCAGGAATTTTGTGTACCTGGAGTCATCCTGAGCCAGAGTaGGAGGGATCACAACCAGACCCAGCACGAAGATCAAGAACAACG | + |
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Preference number: 5 (lower is better) Translates to: AESGILCTWSHPEPE*EGSQPDPARRSRTT Trigger: CGTTGTTCTTGATCTTCGTGCTGGGTCTGGTTGTGATCCCTCCCACTCTGGCTCAGGATGACTCCAGGTACACAAAATTCCTGACTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CCA 90 bp | TCTTCATCATACGTTCACAGTATCTGTCGTCCCGGCCCTTTGGCTTaGCGTCATGGTGCTGAGTCAGGAATTTTGTGTACCTGGAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: SSSYVHSICRPGPLA*RHGAESGILCTWSH Trigger: ATGACTCCAGGTACACAAAATTCCTGACTCAGCACCATGACGCCAAGCCAAAGGGCCGGGACGACAGATACTGTGAACGTATGATGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CCA 90 bp | TCTTCTCTTCATCATACGTTCACAGTATCTGTCGTCCCGGCCCTTTaGCTTGGCGTCATGGTGCTGAGTCAGGAATTTTGTGTACCTGGA | + |
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Preference number: 5 (lower is better) Translates to: SSLHHTFTVSVVPAL*LGVMVLSQEFCVPG Trigger: TCCAGGTACACAAAATTCCTGACTCAGCACCATGACGCCAAGCCAAAGGGCCGGGACGACAGATACTGTGAACGTATGATGAAGAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CAA 90 bp | GATAGTTCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCAAGGTGTTGACATCTTaGCAGGGTGAGGTTAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: DSSFFWPLTMNDGTSVLGKVLTS*QGEVRL Trigger: AAGCCTAACCTCACCCTGCAAAGATGTCAACACCTT...GCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGAACTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CAA 90 bp | TCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCTATGAGAAGGTGTTGACATCTTaGCAGGGTGAGGTTAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: SFFWPLTMNDGTSVLGYEKVLTS*QGEVRL Trigger: AAGCCTAACCTCACCCTGCAAAGATGTCAACACCTT...CTCATAGCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CAA 90 bp | TCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCTATGAGCCATGGATAAAGGTGTaGACATCTTTGCAGGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: SFFWPLTMNDGTSVLGYEPWIKV*TSLQGE Trigger: CTCACCCTGCAAAGATGTCAACACCTTTATCCATGG...CTCATAGCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CAA 90 bp | CTGTGCATTGCAAATCAGGAGACATATGTTTTAGATAGTTCGTTTTTCTGGCCCGACCCTCCTGTGTGCTaGCAAGTGGTGACCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LCIANQETYVLDSSFFWPDPPVC*QVVTWK Trigger: CTTCCAGGTCACCACTTGCAAGCACACAGGAGGGTC...GGGCCAGAAAAACGAACTATCTAAAACATATGTCTCCTGATTTGCAATGCACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CAA 90 bp | GATAGTTCGTTTTTCTGGCCCCTGACAATGAACGATGGAACCAGTGTTCTGGGCACCTGGAAGGGAGACTaGCTCATTCTTAAGTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: DSSFFWPLTMNDGTSVLGTWKGD*LILKFS Trigger: AGAAAACTTAAGAATGAGCAAGTCTCCCTTCCAGGT...GCCCAGAACACTGGTTCCATCGTTCATTGTCAGGGGCCAGAAAAACGAACTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CAA 90 bp | TGGCTTTTGAGACATCTTTATTTCTGTGCATTGCAAATCAGGAGACATATGTTTGACCCTCCTGTGTGCTaGCAAGTGGTGACCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: WLLRHLYFCALQIRRHMFDPPVC*QVVTWK Trigger: CTTCCAGGTCACCACTTGCAAGCACACAGGAGGGTC...AAACATATGTCTCCTGATTTGCAATGCACAGAAATAAAGATGTCTCAAAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS-3UTR CAA 90 bp | CTGTGCATTGCAAATCAGGAGACATATGTTTTAGATAGTTCGTTTTTCTGGCCCCCATGGATAAAGGTGTaGACATCTTTGCAGGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: LCIANQETYVLDSSFFWPPWIKV*TSLQGE Trigger: CTCACCCTGCAAAGATGTCAACACCTTTATCCATGG...GGGCCAGAAAAACGAACTATCTAAAACATATGTCTCCTGATTTGCAATGCACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS GCA 72 bp | CGGTACTGGCATGGAGGTCGGGGAGACCCTCCTGTGTaGTTGCAAGTGGTGACCTGGAAGGGAGACTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RYWHGGRGDPPV*LQVVTWKGDLL Trigger: GAGCAAGTCTCCCTTCCAGGTCACCACTTGCAAGCACACAGGAGGGTCTCCCCGACCTCCATGCCAGTACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CAA 90 bp | CGTCCCGGCCCTTTGGCTTGGCGTCATGGTGCTGAGTCAGGAATTTaGTGTACCTGGAGTCATCCTGAGCCAGAGTGGGAGGGATCACAA | + |
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Preference number: 6 (lower is better) Translates to: RPGPLAWRHGAESGI*CTWSHPEPEWEGSQ Trigger: TTGTGATCCCTCCCACTCTGGCTCAGGATGACTCCAGGTACACAAAATTCCTGACTCAGCACCATGACGCCAAGCCAAAGGGCCGGGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CAA 90 bp | GAGGCTCGGTACTGGCATGGAGGTCGGGGAGACCCTCCTGTGTGCTaGCAAGTGGTGACCTGGAAGGGAGACTTGCTCATTCTTAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: EARYWHGGRGDPPVC*QVVTWKGDLLILKF Trigger: AAACTTAAGAATGAGCAAGTCTCCCTTCCAGGTCACCACTTGCAAGCACACAGGAGGGTCTCCCCGACCTCCATGCCAGTACCGAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS GCA 72 bp | ACCATTCTCACAGGCAATAACAACATGTCTGAACCCTaGAGAGGCTCGGTACTGGCATGGAGGTCGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: TILTGNNNMSEP*RGSVLAWRSGR Trigger: TCTCCCCGACCTCCATGCCAGTACCGAGCCTCTGCAGGGTTCAGACATGTTGTTATTGCCTGTGAGAATGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CAA 72 bp | CCTTTGGCTTGGCGTCATGGTGCTGAGTCAGGAATTTaGTGTACCTGGAGTCATCCTGAGCCAGAGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: PLAWRHGAESGI*CTWSHPEPEWE Trigger: CTCCCACTCTGGCTCAGGATGACTCCAGGTACACAAAATTCCTGACTCAGCACCATGACGCCAAGCCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CCA 72 bp | GGAATTTTGTGTACCTGGAGTCATCCTGAGCCAGAGTaGGAGGGATCACAACCAGACCCAGCACGAAGATCA | + |
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Preference number: 6 (lower is better) Translates to: GILCTWSHPEPE*EGSQPDPARRS Trigger: TGATCTTCGTGCTGGGTCTGGTTGTGATCCCTCCCACTCTGGCTCAGGATGACTCCAGGTACACAAAATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CCA 72 bp | TGGCGTCATGGTGCTGAGTCAGGAATTTTGTGTACCTaGAGTCATCCTGAGCCAGAGTGGGAGGGATCACAA | + |
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Preference number: 6 (lower is better) Translates to: WRHGAESGILCT*SHPEPEWEGSQ Trigger: TTGTGATCCCTCCCACTCTGGCTCAGGATGACTCCAGGTACACAAAATTCCTGACTCAGCACCATGACGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CCA 72 bp | TACGTTCACAGTATCTGTCGTCCCGGCCCTTTGGCTTaGCGTCATGGTGCTGAGTCAGGAATTTTGTGTACC | + |
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Preference number: 6 (lower is better) Translates to: YVHSICRPGPLA*RHGAESGILCT Trigger: GGTACACAAAATTCCTGACTCAGCACCATGACGCCAAGCCAAAGGGCCGGGACGACAGATACTGTGAACGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CCA 72 bp | CGGGGAGACCCTCCTGTGTGCTTGCAAGTGGTGACCTaGAAGGGAGACTTGCTCATTCTTAAGTTTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RGDPPVCLQVVT*KGDLLILKFSL Trigger: CAGAGAAAACTTAAGAATGAGCAAGTCTCCCTTCCAGGTCACCACTTGCAAGCACACAGGAGGGTCTCCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CCA 72 bp | CATCATACGTTCACAGTATCTGTCGTCCCGGCCCTTTaGCTTGGCGTCATGGTGCTGAGTCAGGAATTTTGT | + |
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Preference number: 6 (lower is better) Translates to: HHTFTVSVVPAL*LGVMVLSQEFC Trigger: ACAAAATTCCTGACTCAGCACCATGACGCCAAGCCAAAGGGCCGGGACGACAGATACTGTGAACGTATGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CAA 72 bp | TCATCATACGTTCACAGTATCTGTCGTCCCGGCCCTTaGGCTTGGCGTCATGGTGCTGAGTCAGGAATTTTG | + |
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Preference number: 6 (lower is better) Translates to: SSYVHSICRPGP*AWRHGAESGIL Trigger: CAAAATTCCTGACTCAGCACCATGACGCCAAGCCAAAGGGCCGGGACGACAGATACTGTGAACGTATGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CAA 90 bp | TTCTTCTCTTCATCATACGTTCACAGTATCTGTCGTCCCGGCCCTTaGGCTTGGCGTCATGGTGCTGAGTCAGGAATTTTGTGTACCTGG | + |
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Preference number: 6 (lower is better) Translates to: FFSSSYVHSICRPGP*AWRHGAESGILCTW Trigger: CCAGGTACACAAAATTCCTGACTCAGCACCATGACGCCAAGCCAAAGGGCCGGGACGACAGATACTGTGAACGTATGATGAAGAGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CAA 72 bp | CCATTCGCTCCACAGATGGCCTTGATGTTGCTCTTGTaGCCATGGATAAAGGTGTTGACATCTTTGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: PFAPQMALMLLL*PWIKVLTSLQG Trigger: ACCCTGCAAAGATGTCAACACCTTTATCCATGGCAACAAGAGCAACATCAAGGCCATCTGTGGAGCGAATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CAA 90 bp | GCCTTGATGTTGCTCTTGTTGCCATGGATAAAGGTGTTGACATCTTaGCAGGGTGAGGTTAGGCTTCTTCTCTTCATCATACGTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: ALMLLLLPWIKVLTS*QGEVRLLLFIIRSQ Trigger: CTGTGAACGTATGATGAAGAGAAGAAGCCTAACCTCACCCTGCAAAGATGTCAACACCTTTATCCATGGCAACAAGAGCAACATCAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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| CDS CAA 72 bp | TTGCTCTTGTTGCCATGGATAAAGGTGTTGACATCTTaGCAGGGTGAGGTTAGGCTTCTTCTCTTCATCATA | + |
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Preference number: 6 (lower is better) Translates to: LLLLPWIKVLTS*QGEVRLLLFII Trigger: TATGATGAAGAGAAGAAGCCTAACCTCACCCTGCAAAGATGTCAACACCTTTATCCATGGCAACAAGAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069011.9 ENSMUST00000171688.9 |
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