RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANAPC7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029466

Ensembl transcript IDs: ENSMUST00000031422.10, ENSMUST00000119792.2, ENSMUST00000122010.8, ENSMUST00000154074.2

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAATGCTCAGGCCTCGCCCACGCCGGGCAGGAGCTCCGCGCCACTaGAGCAACTTCAGGATCACAGCCTCTCCCTCTGCCCAGGCAGTC +
Preference number: 1 (lower is better)
Translates to: GMLRPRPRRAGAPRH*SNFRITASPSAQAV
Trigger: GACTGCCTGGGCAGAGGGAGAGGCTGTGATCCTGAAGTTGCTTCAGTGGCGCGGAGCTCCTGCCCGGCGTGGGCGAGGCCTGAGCATTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 90 bp CCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTaGTGCCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTAT +
Preference number: 1 (lower is better)
Translates to: PSAQAVGSASVPQET*CLVSRARPCCILSY
Trigger: ATAGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 90 bp GGAGGCCTGGTGCTCACAGCCAGGCACAGAACACAGCCCAGCACATaGAGGAGGGAACCAGGATCAGAACACCAAGGCCAGCCTCAGGTA +
Preference number: 1 (lower is better)
Translates to: GGLVLTARHRTQPST*RREPGSEHQGQPQV
Trigger: TACCTGAGGCTGGCCTTGGTGTTCTGATCCTGGTTCCCTCCTGCATGTGCTGGGCTGTGTTCTGTGCCTGGCTGTGAGCACCAGGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 90 bp TCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTGCTaGCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTATGCA +
Preference number: 1 (lower is better)
Translates to: SAQAVGSASVPQETC*LVSRARPCCILSYA
Trigger: TGCATAGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CCA 90 bp AAGCCATGGGGTGTGGGCAAGCACAGGAGAGCTGTACAGTCAGCCTaGGTGCTGCTCGGATGTGGGCTGGGGAAGAAGGATAACTCCGCT +
Preference number: 1 (lower is better)
Translates to: KPWGVGKHRRAVQSA*VLLGCGLGKKDNSA
Trigger: AGCGGAGTTATCCTTCTTCCCCAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTCCTGTGCTTGCCCACACCCCATGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CCA 90 bp CCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTGCTGCCTaGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTATGCACAGA +
Preference number: 1 (lower is better)
Translates to: PRQSGQQASLRKLAA*FLVPGHAASCPMHR
Trigger: TCTGTGCATAGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 90 bp CATGGGGTGTGGGCAAGCACAGGAGAGCTGTACAGTCAGCCTGGGTaGTGCTCGGATGTGGGCTGGGGAAGAAGGATAACTCCGCTAATG +
Preference number: 1 (lower is better)
Translates to: HGVWASTGELYSQPG*CSDVGWGRRITPLM
Trigger: CATTAGCGGAGTTATCCTTCTTCCCCAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTCCTGTGCTTGCCCACACCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 90 bp CGGGTCAGCAAGCGTCCCTCAGGAAACTTGCTGCCTGGTTTCTCGTaGCAGGCCATGCTGCATCCTGTCCTATGCACAGACACAGTGGAG +
Preference number: 1 (lower is better)
Translates to: RVSKRPSGNLLPGFS*QAMLHPVLCTDTVE
Trigger: CTCCACTGTGTCTGTGCATAGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAGGGACGCTTGCTGACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR TCA 90 bp GATGCAGATGCAGGACGGAGGGCGAGTCGACCTGCTCCCAGGTGCTaGGGAATAATGCAGGCAGATGCTGAAGGCATCTCAGTGAAGAGC +
Preference number: 1 (lower is better)
Translates to: DADAGRRASRPAPRC*GIMQADAEGISVKS
Trigger: GCTCTTCACTGAGATGCCTTCAGCATCTGCCTGCATTATTCCTCAGCACCTGGGAGCAGGTCGACTCGCCCTCCGTCCTGCATCTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR TCA 90 bp AGGCTTCCACCCTGTAGCCCGGCCCTGCAGACTGCTTGGAGGTTCTaGGTACTGAGTGCTCAAAAGCACTGCCTCAGCTATCTCCTGGAC +
Preference number: 1 (lower is better)
Translates to: RLPPCSPALQTAWRF*VLSAQKHCLSYLLD
Trigger: GTCCAGGAGATAGCTGAGGCAGTGCTTTTGAGCACTCAGTACTCAGAACCTCCAAGCAGTCTGCAGGGCCGGGCTACAGGGTGGAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 90 bp CTCGTTACTATTCTCATCCTGCCTTCAACTGTGGGCACGCGTGTTTaGAGACCTGCCACACAGGCCCTGCCTCCTCTCTTTCCCTCCCGT +
Preference number: 1 (lower is better)
Translates to: LVTILILPSTVGTRV*RPATQALPPLFPSR
Trigger: ACGGGAGGGAAAGAGAGGAGGCAGGGCCTGTGTGGCAGGTCTGCAAACACGCGTGCCCACAGTTGAAGGCAGGATGAGAATAGTAACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 90 bp GTAGACACCAGTCCCGACTACTACTTGGAAACAGGCAGGGAGCCCTaGTGTGAGCACACTTCCGACAGCATCTGTCACTCTCGGAACACC +
Preference number: 1 (lower is better)
Translates to: VDTSPDYYLETGREP*CEHTSDSICHSRNT
Trigger: GGTGTTCCGAGAGTGACAGATGCTGTCGGAAGTGTGCTCACAGCAGGGCTCCCTGCCTGTTTCCAAGTAGTAGTCGGGACTGGTGTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR GCA 90 bp CTGAACAGTTTATTAGGTGAGCCTGTCCTGTGTGTGGCCATCATCTaGTCCTCAGATCTGCCCACTGGGGCCAAGTGCTGCTCTGCAGTC +
Preference number: 1 (lower is better)
Translates to: LNSLLGEPVLCVAII*SSDLPTGAKCCSAV
Trigger: GACTGCAGAGCAGCACTTGGCCCCAGTGGGCAGATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTCACCTAATAAACTGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR CCA 90 bp CACAAACACCTTCTCTCGTTACTATTCTCATCCTGCCTTCAACTGTaGGCACGCGTGTTTGCAGACCTGCCACACAGGCCCTGCCTCCTC +
Preference number: 1 (lower is better)
Translates to: HKHLLSLLFSSCLQL*ARVFADLPHRPCLL
Trigger: GAGGAGGCAGGGCCTGTGTGGCAGGTCTGCAAACACGCGTGCCCACAGTTGAAGGCAGGATGAGAATAGTAACGAGAGAAGGTGTTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CCA 90 bp GGAAACCGTGGAGTCAGTTCTCTCCTGCAACCTTCACAGGGGCTCTaGGGATCCACTTGGGTCTCCAGGGTTATGTGGCAAGCACTATTA +
Preference number: 1 (lower is better)
Translates to: GNRGVSSLLQPSQGL*GSTWVSRVMWQALL
Trigger: TAATAGTGCTTGCCACATAACCCTGGAGACCCAAGTGGATCCCCAGAGCCCCTGTGAAGGTTGCAGGAGAGAACTGACTCCACGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CCA 90 bp GTAATGTGTAAGTCATGGCATGCATGCGAGGTCAGAGGGAAACCGTaGAGTCAGTTCTCTCCTGCAACCTTCACAGGGGCTCTGGGGATC +
Preference number: 1 (lower is better)
Translates to: VMCKSWHACEVRGKP*SQFSPATFTGALGI
Trigger: GATCCCCAGAGCCCCTGTGAAGGTTGCAGGAGAGAACTGACTCCACGGTTTCCCTCTGACCTCGCATGCATGCCATGACTTACACATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 90 bp CTTAGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATaGCTCTGCCTCTCAAGTGCAGGCTTCCAGAACGTGTCTCCACCA +
Preference number: 1 (lower is better)
Translates to: LRTSLAMQPSTSQLS*LCLSSAGFQNVSPP
Trigger: TGGTGGAGACACGTTCTGGAAGCCTGCACTTGAGAGGCAGAGGCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR GCA 90 bp TTGCTGCCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTATaGACAGACACAGTGGAGTCTGTGACATCTCTTCTTTACCCAAAC +
Preference number: 1 (lower is better)
Translates to: LLPGFSCQAMLHPVL*TDTVESVTSLLYPN
Trigger: GTTTGGGTAAAGAAGAGATGTCACAGACTCCACTGTGTCTGTGCATAGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 90 bp CACACACGTACGTTTGTCTGTGTAATGTGTAAGTCATGGCATGCATaGGAGGTCAGAGGGAAACCGTGGAGTCAGTTCTCTCCTGCAACC +
Preference number: 1 (lower is better)
Translates to: HTRTFVCVMCKSWHA*EVRGKPWSQFSPAT
Trigger: GGTTGCAGGAGAGAACTGACTCCACGGTTTCCCTCTGACCTCGCATGCATGCCATGACTTACACATTACACAGACAAACGTACGTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR TCA 90 bp GATGAATACATGCAGCCTGCCTCAGGCAAGCTGTTCTTCCGGGTGTaGCACTGTTTCACATTCTACCATGAACTGTGGGTAACTACAGCC +
Preference number: 1 (lower is better)
Translates to: DEYMQPASGKLFFRV*HCFTFYHELWVTTA
Trigger: GGCTGTAGTTACCCACAGTTCATGGTAGAATGTGAAACAGTGTCACACCCGGAAGAACAGCTTGCCTGAGGCAGGCTGCATGTATTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CCA 90 bp ATGTGCACGCACACACGTACGTTTGTCTGTGTAATGTGTAAGTCATaGCATGCATGCGAGGTCAGAGGGAAACCGTGGAGTCAGTTCTCT +
Preference number: 1 (lower is better)
Translates to: MCTHTRTFVCVMCKS*HACEVRGKPWSQFS
Trigger: AGAGAACTGACTCCACGGTTTCCCTCTGACCTCGCATGCATGCCATGACTTACACATTACACAGACAAACGTACGTGTGTGCGTGCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR TCA 90 bp TTCCCAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTaGCGCCCTCTTCTGGGGTGTCTGAAGATAGCTACAGTATATTCA +
Preference number: 1 (lower is better)
Translates to: FPATTWWLTTICNGI*RPLLGCLKIATVYS
Trigger: TGAATATACTGTAGCTATCTTCAGACACCCCAGAAGAGGGCGTCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR TCA 90 bp AGGCCATGCTGCATCCTGTCCTATGCACAGACACAGTGGAGTCTGTaGCATCTCTTCTTTACCCAAACCTTCCACAAAACTCTGCCTACA +
Preference number: 1 (lower is better)
Translates to: RPCCILSYAQTQWSL*HLFFTQTFHKTLPT
Trigger: TGTAGGCAGAGTTTTGTGGAAGGTTTGGGTAAAGAAGAGATGTCACAGACTCCACTGTGTCTGTGCATAGGACAGGATGCAGCATGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 90 bp CAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTaGGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTCAC +
Preference number: 1 (lower is better)
Translates to: QNVSPPDRPPCPTSY*ADSVLIIHNESTSH
Trigger: GTGAGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR CCA 90 bp GCCCACGCCGGGCAGGAGCTCCGCGCCACTGAAGCAACTTCAGGATCACAGCCTCCTTCACAGGGGCTCTaGGGATCCACTTGGGTCTCC +
Preference number: 2 (lower is better)
Translates to: AHAGQELRATEATSGSQPPSQGL*GSTWVS
Trigger: GGAGACCCAAGTGGATCCCCAGAGCCCCTGTGAAGG...AGGCTGTGATCCTGAAGTTGCTTCAGTGGCGCGGAGCTCCTGCCCGGCGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR TCA 90 bp GCCCACGCCGGGCAGGAGCTCCGCGCCACTGAAGCAACTTCAGGATCACAGCCTCTCTCCCAGAGGTCCTaGGTTCAATTCCCAGCAACC +
Preference number: 2 (lower is better)
Translates to: AHAGQELRATEATSGSQPLSQRS*VQFPAT
Trigger: GGTTGCTGGGAATTGAACTCAGGACCTCTGGGAGAG...AGGCTGTGATCCTGAAGTTGCTTCAGTGGCGCGGAGCTCCTGCCCGGCGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CAA 90 bp TCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTaGCTGCCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTA +
Preference number: 2 (lower is better)
Translates to: SLCPGSRVSKRPSGN*LPGFSCQAMLHPVL
Trigger: TAGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp CAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTTCTCGTGCCAGGCCATaGTGCATCCTGTCCTATGCA +
Preference number: 2 (lower is better)
Translates to: QPLPLPRQSGQQASLRKLSRARP*CILSYA
Trigger: TGCATAGGACAGGATGCAGCATGGCCTGGCACGAGA...AAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp CAGAACACAGCCCAGCACATGCAGGAGGGAACCAGGATCAGAACACCAAGGCCAGGTCCTGGAAAGGAATaGTCAGGCCTCGCCCACGCC +
Preference number: 2 (lower is better)
Translates to: QNTAQHMQEGTRIRTPRPGPGKE*SGLAHA
Trigger: GGCGTGGGCGAGGCCTGAGCATTCCTTTCCAGGACC...TGGCCTTGGTGTTCTGATCCTGGTTCCCTCCTGCATGTGCTGGGCTGTGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CAA 90 bp TCTCGTTACTATTCTCATCCTGCCTTCAACTGTGGGCACGCGTGTTaGCAGACCTGCCACACAGGCCCTGCCTCCTCTCTTTCCCTCCCG +
Preference number: 2 (lower is better)
Translates to: SRYYSHPAFNCGHAC*QTCHTGPASSLSLP
Trigger: CGGGAGGGAAAGAGAGGAGGCAGGGCCTGTGTGGCAGGTCTGCAAACACGCGTGCCCACAGTTGAAGGCAGGATGAGAATAGTAACGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp AGGCTTCCAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTGACAGGCAGGGAGCCCTaGTGTGAGCACACTTCCGAC +
Preference number: 2 (lower is better)
Translates to: RLPERVSTRQTTLSHFLLTGREP*CEHTSD
Trigger: GTCGGAAGTGTGCTCACAGCAGGGCTCCCTGCCTGT...CAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTGGAAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR GCA 90 bp GATGCTGAAGGCATCTCAGTGAAGAGCCAGGCTGGTTCATGTGACAGGCTCGGGTCTGCTCCTCAGATCTaGCCACTGGGGCCAAGTGCT +
Preference number: 2 (lower is better)
Translates to: DAEGISVKSQAGSCDRLGSAPQI*PLGPSA
Trigger: AGCACTTGGCCCCAGTGGGCAGATCTGAGGAGCAGA...CCCGAGCCTGTCACATGAACCAGCCTGGCTCTTCACTGAGATGCCTTCAGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR GCA 90 bp AAAGGGAAAACAAGGTCCTGGAAAGGAATGCTCAGGCCTCGCCCACGCCGGGCAGTCCCTCAGGAAACTTaGTGCCTGGTTTCTCGTGCC +
Preference number: 2 (lower is better)
Translates to: KGKTRSWKGMLRPRPRRAVPQET*CLVSRA
Trigger: GGCACGAGAAACCAGGCAGCAAGTTTCCTGAGGGAC...TGCCCGGCGTGGGCGAGGCCTGAGCATTCCTTTCCAGGACCTTGTTTTCCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp AATACATGCAGCCTGCCTCAGGCAAGCTGTTCTTCCGGGTGTGACACTGTTTCACACAGCCTCTCCCTCTaGCCAGGCAGTCGGGTCAGC +
Preference number: 2 (lower is better)
Translates to: NTCSLPQASCSSGCDTVSHSLSL*PGSRVS
Trigger: GCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTGTG...TGAAACAGTGTCACACCCGGAAGAACAGCTTGCCTGAGGCAGGCTGCATGTATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CAA 90 bp AGTCCTCAGCAAAGCAGACAGGTAGACACCAGTCCCGACTACTACTaGGAAACAGGCAGGGAGCCCTGCTGTGAGCACACTTCCGACAGC +
Preference number: 2 (lower is better)
Translates to: SPQQSRQVDTSPDYY*ETGREPCCEHTSDS
Trigger: GCTGTCGGAAGTGTGCTCACAGCAGGGCTCCCTGCCTGTTTCCAAGTAGTAGTCGGGACTGGTGTCTACCTGTCTGCTTTGCTGAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR TCA 90 bp AAAAGGGAAAACAAGGTCCTGGAAAGGAATGCTCAGGCCTCGCCCACGCCGGGCGGAGGTTCTGAGTACTaGGTGCTCAAAAGCACTGCC +
Preference number: 2 (lower is better)
Translates to: KRENKVLERNAQASPTPGGGSEY*VLKSTA
Trigger: GGCAGTGCTTTTGAGCACTCAGTACTCAGAACCTCC...GCCCGGCGTGGGCGAGGCCTGAGCATTCCTTTCCAGGACCTTGTTTTCCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR TCA 90 bp CACAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACACACAGTGGAGTCTGTaGCATCTCTTCTTTACCCAA +
Preference number: 2 (lower is better)
Translates to: HSLSLCPGSRVSKRPSGNTQWSL*HLFFTQ
Trigger: TTGGGTAAAGAAGAGATGTCACAGACTCCACTGTGT...GTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp AGAGCCAGGACCAAAGCATCCTCATTAGTAGCAACCCCACAAAGCCCAGCGTCCCCCGGCCCTGCAGACTaGTTGGAGGTTCTGAGTACT +
Preference number: 2 (lower is better)
Translates to: RARTKASSLVATPQSPASPGPAD*LEVLST
Trigger: AGTACTCAGAACCTCCAAGCAGTCTGCAGGGCCGGG...GGACGCTGGGCTTTGTGGGGTTGCTACTAATGAGGATGCTTTGGTCCTGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp CTCAGGAAACTTGCTGCCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTAAGTCATGGCATGCATaGGAGGTCAGAGGGAAACCG +
Preference number: 2 (lower is better)
Translates to: LRKLAAWFLVPGHAASCPKSWHA*EVRGKP
Trigger: CGGTTTCCCTCTGACCTCGCATGCATGCCATGACTT...AGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR CCA 90 bp CAAAAGCACTGCCTCAGCTATCTCCTGGACAAGAGAACGGACGCACGCGACACCCTCTGTAGACCAGGCTaGCCTCGAACTCAGAAACCT +
Preference number: 2 (lower is better)
Translates to: QKHCLSYLLDKRTDARDTLCRPG*PRTQKP
Trigger: AGGTTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAG...GGTGTCGCGTGCGTCCGTTCTCTTGTCCAGGAGATAGCTGAGGCAGTGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp AAACTTGCTGCCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTATGCACGAGTCAGTTCTCTCCTaGAACCTTCACAGGGGCTCT +
Preference number: 2 (lower is better)
Translates to: KLAAWFLVPGHAASCPMHESVLS*NLHRGS
Trigger: AGAGCCCCTGTGAAGGTTGCAGGAGAGAACTGACTC...GTGCATAGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR CCA 90 bp CTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAGGGTCCCGACTACTACTTaGAAACAGGCAGGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: LDLHLERHHTRDADAGRRVPTTT*KQAGSP
Trigger: AGGGCTCCCTGCCTGTTTCCAAGTAGTAGTCGGGAC...CCTCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR CCA 90 bp AATACATGCAGCCTGCCTCAGGCAAGCTGTTCTTCCGGGTGTGACACTGTTTCAAACCCTCTGAAGCCATaGGGTGTGGGCAAGCACAGG +
Preference number: 2 (lower is better)
Translates to: NTCSLPQASCSSGCDTVSNPLKP*GVGKHR
Trigger: CCTGTGCTTGCCCACACCCCATGGCTTCAGAGGGTT...TGAAACAGTGTCACACCCGGAAGAACAGCTTGCCTGAGGCAGGCTGCATGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR TCA 90 bp AGGCTTCCAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTGAATGCAGGCAGATGCTaGAGGCATCTCAGTGAAGAG +
Preference number: 2 (lower is better)
Translates to: RLPERVSTRQTTLSHFLLNAGRC*RHLSEE
Trigger: CTCTTCACTGAGATGCCTTCAGCATCTGCCTGCATT...CAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTGGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR GCA 90 bp AATACATGCAGCCTGCCTCAGGCAAGCTGTTCTTCCGGGTGTGACACTGTTTCAACTCAGAAACCTGCCTaGCTCTGCCTCTGCCTCTCA +
Preference number: 2 (lower is better)
Translates to: NTCSLPQASCSSGCDTVSTQKPA*LCLCLS
Trigger: TGAGAGGCAGAGGCAGAGGCAGGCAGGTTTCTGAGT...TGAAACAGTGTCACACCCGGAAGAACAGCTTGCCTGAGGCAGGCTGCATGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR CCA 90 bp AGGCTTCCAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTGCGGCCGCCCAGCACATaGGAGAAGACAGTATATTTA +
Preference number: 2 (lower is better)
Translates to: RLPERVSTRQTTLSHFLLRPPST*EKTVYL
Trigger: TAAATATACTGTCTTCTCCCATGTGCTGGGCGGCCG...CAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTGGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR CCA 90 bp AATACATGCAGCCTGCCTCAGGCAAGCTGTTCTTCCGGGTGTGACACTGTTTCAGCCTCAGCTATCTCCTaGACAAGAGAACGGACGCAC +
Preference number: 2 (lower is better)
Translates to: NTCSLPQASCSSGCDTVSASAIS*TRERTH
Trigger: GTGCGTCCGTTCTCTTGTCCAGGAGATAGCTGAGGC...TGAAACAGTGTCACACCCGGAAGAACAGCTTGCCTGAGGCAGGCTGCATGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp GTCTGTGACATCTCTTCTTTACCCAAACCTTCCACAAAACTCTGCCTACACAGAGCGTGTTTGCAGACCTaGCACACAGGCCCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: VCDISSLPKPSTKLCLHRACLQT*HTGPAS
Trigger: GGAGGCAGGGCCTGTGTGGCAGGTCTGCAAACACGC...TCTGTGTAGGCAGAGTTTTGTGGAAGGTTTGGGTAAAGAAGAGATGTCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp CAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTCAGGTCGAACTCAGAAACCTaGCTGCCTCTGCCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: QLKILTSLALCWRQWPVRSNSET*LPLPLP
Trigger: AGGCAGAGGCAGAGGCAGGCAGGTTTCTGAGTTCGA...CCTGACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp ATGGCAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTCCTCAGGAAACTTGCTaGCTGGTTTCTCGTGCCAGG +
Preference number: 2 (lower is better)
Translates to: MAIKDSNFTSTLLEAVASPQETC*LVSRAR
Trigger: CCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAGG...ACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR CCA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTCTCAGATCTGCCCACTaGGGCCAAGTGCTGCTCTGC +
Preference number: 2 (lower is better)
Translates to: PTSYCADSVLIIHNESTSLRSAH*GQVLLC
Trigger: GCAGAGCAGCACTTGGCCCCAGTGGGCAGATCTGAG...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR GCA 90 bp ATGTATCTTAGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCTGTGTGGCCATCATCTaGTCCTCAGATCTGCCCACT +
Preference number: 2 (lower is better)
Translates to: MYLRTSLAMQPSTSQLSCCVAII*SSDLPT
Trigger: AGTGGGCAGATCTGAGGAGCAGATGATGGCCACACA...GCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCTAAGATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR GCA 90 bp AAAAGGGAAAACAAGGTCCTGGAAAGGAATGCTCAGGCCTCGCCCACGCCGGGCATAACTCCGCTAATGTaGTTTAGGAAAATATGTCAG +
Preference number: 2 (lower is better)
Translates to: KRENKVLERNAQASPTPGITPLM*FRKICQ
Trigger: CTGACATATTTTCCTAAAGCACATTAGCGGAGTTAT...GCCCGGCGTGGGCGAGGCCTGAGCATTCCTTTCCAGGACCTTGTTTTCCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp CAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTCAGGCCTTCCACAAAACTCTaGCTACACAGAGGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: QLKILTSLALCWRQWPVRPSTKL*LHRGFH
Trigger: GTGGAAGCCTCTGTGTAGGCAGAGTTTTGTGGAAGG...CCTGACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR TCA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTCCTGCTCCCAGGTGCTaGGGAATAATGCAGGCAGAT +
Preference number: 2 (lower is better)
Translates to: PTSYCADSVLIIHNESTSPAPRC*GIMQAD
Trigger: ATCTGCCTGCATTATTCCTCAGCACCTGGGAGCAGG...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR GCA 90 bp GTCTGTGACATCTCTTCTTTACCCAAACCTTCCACAAAACTCTGCCTACACAGAGTTAAGAGTGCTGACTaGTCTCCCAGAGGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: VCDISSLPKPSTKLCLHRVKSAD*SPRGPE
Trigger: CTCAGGACCTCTGGGAGAGCAGTCAGCACTCTTAAC...TCTGTGTAGGCAGAGTTTTGTGGAAGGTTTGGGTAAAGAAGAGATGTCACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR GCA 90 bp ATGGCAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTAGTGCTCAAAAGCACTaGCTCAGCTATCTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: MAIKDSNFTSTLLEAVASSAQKH*LSYLLD
Trigger: GTCCAGGAGATAGCTGAGGCAGTGCTTTTGAGCACT...ACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR CCA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTAGCCTGTCCTGTGTGTaGCCATCATCTGCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PTSYCADSVLIIHNESTSSLSCV*PSSAPQ
Trigger: CTGAGGAGCAGATGATGGCCACACACAGGACAGGCT...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR CCA 90 bp CTGATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCCTGTCTAGGCCCACATaGCTGCCTCTGACAAGGCGA +
Preference number: 2 (lower is better)
Translates to: LIIHNESTSHIPSTLICILSRPT*LPLTRR
Trigger: TCGCCTTGTCAGAGGCAGCCATGTGGGCCTAGACAG...GATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR TCA 90 bp TGTGACATCTCTTCTTTACCCAAACCTTCCACAAAACTCTGCCTACACAGAGGCACTGCTTGGAGGTTCTaGGTACTGAGTGCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: CDISSLPKPSTKLCLHRGTAWRF*VLSAQK
Trigger: CTTTTGAGCACTCAGTACTCAGAACCTCCAAGCAGT...GCCTCTGTGTAGGCAGAGTTTTGTGGAAGGTTTGGGTAAAGAAGAGATGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR TCA 90 bp CTGATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCCTGAAGGCATCTCAGTaGAGAGCCAGGCTGGTTCAT +
Preference number: 2 (lower is better)
Translates to: LIIHNESTSHIPSTLICILKASQ*RARLVH
Trigger: ATGAACCAGCCTGGCTCTTCACTGAGATGCCTTCAG...GATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAATCAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR GCA 90 bp ATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGTGTGTGGCCATCATCTaGTCCTCAGATCTGCCCACT +
Preference number: 2 (lower is better)
Translates to: IIHNESTSHIPSTLICILCVAII*SSDLPT
Trigger: AGTGGGCAGATCTGAGGAGCAGATGATGGCCACACA...CAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR GCA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTTCAAAGGGTGTCATGTaGCACCACACTGAACAGTTT +
Preference number: 2 (lower is better)
Translates to: PTSYCADSVLIIHNESTSSKGVM*HHTEQF
Trigger: AAACTGTTCAGTGTGGTGGCACATGACACCCTTTGA...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR CCA 90 bp TGTGACATCTCTTCTTTACCCAAACCTTCCACAAAACTCTGCCTACACAGAGGCTTAAATTTATTGGGCTaGAGACATGGCTCAGCAGTT +
Preference number: 2 (lower is better)
Translates to: CDISSLPKPSTKLCLHRGLNLLG*RHGSAV
Trigger: AACTGCTGAGCCATGTCTCCAGCCCAATAAATTTAA...GCCTCTGTGTAGGCAGAGTTTTGTGGAAGGTTTGGGTAAAGAAGAGATGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR TCA 72 bp AGGCCTCGCCCACGCCGGGCAGGAGCTCCGCGCCACTaGAGCAACTTCAGGATCACAGCCTCTCCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: RPRPRRAGAPRH*SNFRITASPSA
Trigger: GGCAGAGGGAGAGGCTGTGATCCTGAAGTTGCTTCAGTGGCGCGGAGCTCCTGCCCGGCGTGGGCGAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 72 bp CTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATCTaGCCACTGGGGCCAAGTGCTGCTCTGCAGTCCGTG +
Preference number: 3 (lower is better)
Translates to: LSCVWPSSAPQI*PLGPSAALQSV
Trigger: CACGGACTGCAGAGCAGCACTTGGCCCCAGTGGGCAGATCTGAGGAGCAGATGATGGCCACACACAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR GCA 72 bp GCGAGATGCAGATGCAGGACGGAGGGCGAGTCGACCTaGTCCCAGGTGCTGAGGAATAATGCAGGCAGATGC +
Preference number: 3 (lower is better)
Translates to: ARCRCRTEGEST*SQVLRNNAGRC
Trigger: GCATCTGCCTGCATTATTCCTCAGCACCTGGGAGCAGGTCGACTCGCCCTCCGTCCTGCATCTGCATCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR GCA 72 bp GCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTGCTaGCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTG +
Preference number: 3 (lower is better)
Translates to: AVGSASVPQETC*LVSRARPCCIL
Trigger: CAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAGGGACGCTTGCTGACCCGACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 72 bp CCACTGAAGCAACTTCAGGATCACAGCCTCTCCCTCTaGCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGA +
Preference number: 3 (lower is better)
Translates to: PLKQLQDHSLSL*PGSRVSKRPSG
Trigger: TCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTGTGATCCTGAAGTTGCTTCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CCA 72 bp GGTGTGGGCAAGCACAGGAGAGCTGTACAGTCAGCCTaGGTGCTGCTCGGATGTGGGCTGGGGAAGAAGGAT +
Preference number: 3 (lower is better)
Translates to: GVGKHRRAVQSA*VLLGCGLGKKD
Trigger: ATCCTTCTTCCCCAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTCCTGTGCTTGCCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR TCA 72 bp GCAGGACGGAGGGCGAGTCGACCTGCTCCCAGGTGCTaGGGAATAATGCAGGCAGATGCTGAAGGCATCTCA +
Preference number: 3 (lower is better)
Translates to: AGRRASRPAPRC*GIMQADAEGIS
Trigger: TGAGATGCCTTCAGCATCTGCCTGCATTATTCCTCAGCACCTGGGAGCAGGTCGACTCGCCCTCCGTCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR GCA 72 bp GCAAGCACAGGAGAGCTGTACAGTCAGCCTGGGTGCTaGTCGGATGTGGGCTGGGGAAGAAGGATAACTCCG +
Preference number: 3 (lower is better)
Translates to: ASTGELYSQPGC*SDVGWGRRITP
Trigger: CGGAGTTATCCTTCTTCCCCAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTCCTGTGCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 72 bp CGAGGTCAGAGGGAAACCGTGGAGTCAGTTCTCTCCTaGAACCTTCACAGGGGCTCTGGGGATCCACTTGGG +
Preference number: 3 (lower is better)
Translates to: RGQRETVESVLS*NLHRGSGDPLG
Trigger: CCCAAGTGGATCCCCAGAGCCCCTGTGAAGGTTGCAGGAGAGAACTGACTCCACGGTTTCCCTCTGACCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 72 bp GTGCTCACAGCCAGGCACAGAACACAGCCCAGCACATaGAGGAGGGAACCAGGATCAGAACACCAAGGCCAG +
Preference number: 3 (lower is better)
Translates to: VLTARHRTQPST*RREPGSEHQGQ
Trigger: CTGGCCTTGGTGTTCTGATCCTGGTTCCCTCCTGCATGTGCTGGGCTGTGTTCTGTGCCTGGCTGTGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CCA 72 bp TCGGGTCAGCAAGCGTCCCTCAGGAAACTTGCTGCCTaGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: SGQQASLRKLAA*FLVPGHAASCP
Trigger: AGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAGGGACGCTTGCTGACCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR TCA 72 bp GCCCGGCCCTGCAGACTGCTTGGAGGTTCTGAGTACTaGGTGCTCAAAAGCACTGCCTCAGCTATCTCCTGG +
Preference number: 3 (lower is better)
Translates to: ARPCRLLGGSEY*VLKSTASAISW
Trigger: CCAGGAGATAGCTGAGGCAGTGCTTTTGAGCACTCAGTACTCAGAACCTCCAAGCAGTCTGCAGGGCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR TCA 72 bp CCCTGTAGCCCGGCCCTGCAGACTGCTTGGAGGTTCTaGGTACTGAGTGCTCAAAAGCACTGCCTCAGCTAT +
Preference number: 3 (lower is better)
Translates to: PCSPALQTAWRF*VLSAQKHCLSY
Trigger: ATAGCTGAGGCAGTGCTTTTGAGCACTCAGTACTCAGAACCTCCAAGCAGTCTGCAGGGCCGGGCTACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 72 bp TTATTAGGTGAGCCTGTCCTGTGTGTGGCCATCATCTaGTCCTCAGATCTGCCCACTGGGGCCAAGTGCTGC +
Preference number: 3 (lower is better)
Translates to: LLGEPVLCVAII*SSDLPTGAKCC
Trigger: GCAGCACTTGGCCCCAGTGGGCAGATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTCACCTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR GCA 72 bp AGTCCCGACTACTACTTGGAAACAGGCAGGGAGCCCTaGTGTGAGCACACTTCCGACAGCATCTGTCACTCT +
Preference number: 3 (lower is better)
Translates to: SPDYYLETGREP*CEHTSDSICHS
Trigger: AGAGTGACAGATGCTGTCGGAAGTGTGCTCACAGCAGGGCTCCCTGCCTGTTTCCAAGTAGTAGTCGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR CAA 90 bp ACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAAGTCCCGACTACTACTaGGAAACAGGCAGGGAGCCC +
Preference number: 3 (lower is better)
Translates to: TLICILKGITREMQMQDGSPDYY*ETGREP
Trigger: GGGCTCCCTGCCTGTTTCCAAGTAGTAGTCGGGACT...TCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR-3UTR CAA 90 bp AATGGTGAGTCTGCAGCTTGGAACTCGCTCAGTCCTCAGCAAAGCAGACAGGTAAGTCCCGACTACTACTaGGAAACAGGCAGGGAGCCC +
Preference number: 3 (lower is better)
Translates to: NGESAAWNSLSPQQSRQVSPDYY*ETGREP
Trigger: GGGCTCCCTGCCTGTTTCCAAGTAGTAGTCGGGACT...TACCTGTCTGCTTTGCTGAGGACTGAGCGAGTTCCAAGCTGCAGACTCACCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR TCA 72 bp TGCTCCCAGGTGCTGAGGAATAATGCAGGCAGATGCTaGAGGCATCTCAGTGAAGAGCCAGGCTGGTTCATG +
Preference number: 3 (lower is better)
Translates to: CSQVLRNNAGRC*RHLSEEPGWFM
Trigger: CATGAACCAGCCTGGCTCTTCACTGAGATGCCTTCAGCATCTGCCTGCATTATTCCTCAGCACCTGGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR GCA 72 bp AGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATaGCTCTGCCTCTCAAGTGCAGGCTTCCAGAACGTG +
Preference number: 3 (lower is better)
Translates to: SLAMQPSTSQLS*LCLSSAGFQNV
Trigger: CACGTTCTGGAAGCCTGCACTTGAGAGGCAGAGGCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR GCA 72 bp GGCCCTGCAGACTGCTTGGAGGTTCTGAGTACTGAGTaGTCAAAAGCACTGCCTCAGCTATCTCCTGGACAA +
Preference number: 3 (lower is better)
Translates to: GPADCLEVLSTE*SKALPQLSPGQ
Trigger: TTGTCCAGGAGATAGCTGAGGCAGTGCTTTTGAGCACTCAGTACTCAGAACCTCCAAGCAGTCTGCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 72 bp GACATCTCTTCTTTACCCAAACCTTCCACAAAACTCTaGCTACACAGAGGCTTCCACCCTGTAGCCCGGCCC +
Preference number: 3 (lower is better)
Translates to: DISSLPKPSTKL*LHRGFHPVARP
Trigger: GGGCCGGGCTACAGGGTGGAAGCCTCTGTGTAGGCAGAGTTTTGTGGAAGGTTTGGGTAAAGAAGAGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CCA 72 bp GCTCCTAAGAAATCTTTAAAAGGGAAAACAAGGTCCTaGAAAGGAATGCTCAGGCCTCGCCCACGCCGGGCA +
Preference number: 3 (lower is better)
Translates to: APKKSLKGKTRS*KGMLRPRPRRA
Trigger: TGCCCGGCGTGGGCGAGGCCTGAGCATTCCTTTCCAGGACCTTGTTTTCCCTTTTAAAGATTTCTTAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR TCA 72 bp ATGCAGCCTGCCTCAGGCAAGCTGTTCTTCCGGGTGTaGCACTGTTTCACATTCTACCATGAACTGTGGGTA +
Preference number: 3 (lower is better)
Translates to: MQPASGKLFFRV*HCFTFYHELWV
Trigger: TACCCACAGTTCATGGTAGAATGTGAAACAGTGTCACACCCGGAAGAACAGCTTGCCTGAGGCAGGCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CCA 72 bp TGTAAAATCTCCACTAGACGTAACCCTCTGAAGCCATaGGGTGTGGGCAAGCACAGGAGAGCTGTACAGTCA +
Preference number: 3 (lower is better)
Translates to: CKISTRRNPLKP*GVGKHRRAVQS
Trigger: TGACTGTACAGCTCTCCTGTGCTTGCCCACACCCCATGGCTTCAGAGGGTTACGTCTAGTGGAGATTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 72 bp ACGTTTGTCTGTGTAATGTGTAAGTCATGGCATGCATaGGAGGTCAGAGGGAAACCGTGGAGTCAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: TFVCVMCKSWHA*EVRGKPWSQFS
Trigger: AGAGAACTGACTCCACGGTTTCCCTCTGACCTCGCATGCATGCCATGACTTACACATTACACAGACAAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CCA 72 bp GGGCTCTGGGGATCCACTTGGGTCTCCAGGGTTATGTaGCAAGCACTATTACCTTCTCAATCTTTTTGGTTT +
Preference number: 3 (lower is better)
Translates to: GLWGSTWVSRVM*QALLPSQSFWF
Trigger: AAACCAAAAAGATTGAGAAGGTAATAGTGCTTGCCACATAACCCTGGAGACCCAAGTGGATCCCCAGAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR-3UTR CAA 90 bp AGAGCCAGGACCAAAGCATCCTCATTAGTAGCAACCCCACAAAGCCCAGCGTCCAGAATCCTCACTGATTaGGCTCCTAAGAAATCTTTA +
Preference number: 3 (lower is better)
Translates to: RARTKASSLVATPQSPASRILTD*APKKSL
Trigger: TAAAGATTTCTTAGGAGCCAAATCAGTGAGGATTCT...GGACGCTGGGCTTTGTGGGGTTGCTACTAATGAGGATGCTTTGGTCCTGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR GCA 72 bp TCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTaGGCTGACAGTGTTCTGATTATTCACAATGAATCA +
Preference number: 3 (lower is better)
Translates to: SPPDRPPCPTSY*ADSVLIIHNES
Trigger: TGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR TCA 72 bp TGCATCCTGTCCTATGCACAGACACAGTGGAGTCTGTaGCATCTCTTCTTTACCCAAACCTTCCACAAAACT +
Preference number: 3 (lower is better)
Translates to: CILSYAQTQWSL*HLFFTQTFHKT
Trigger: AGTTTTGTGGAAGGTTTGGGTAAAGAAGAGATGTCACAGACTCCACTGTGTCTGTGCATAGGACAGGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR TCA 72 bp TACTGCATACCAGGTCCAGCACCAAAAGCTTCCTACTaGATACGCTGGATCCTCGTCCAACCATTTATTTAT +
Preference number: 3 (lower is better)
Translates to: YCIPGPAPKASY*IRWILVQPFIY
Trigger: ATAAATAAATGGTTGGACGAGGATCCAGCGTATTCAGTAGGAAGCTTTTGGTGCTGGACCTGGTATGCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR TCA 72 bp CCGCTAATGTGCTTTAGGAAAATATGTCAGGAGTCATaGATTCACAAACACCTTCTCTCGTTACTATTCTCA +
Preference number: 3 (lower is better)
Translates to: PLMCFRKICQES*IHKHLLSLLFS
Trigger: TGAGAATAGTAACGAGAGAAGGTGTTTGTGAATTCATGACTCCTGACATATTTTCCTAAAGCACATTAGCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR TCA 90 bp GGCAGGGAGGACCCTGACTCCCAGGAACCAGATTCCCTCTGGCAGGACCACCCACCTCCCGAAAGTGTATaGTGGCTTCCTGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: GREDPDSQEPDSLWQDHPPPESV*WLPGPS
Trigger: GGAGGGTCCAGGAAGCCATCATACACTTTCGGGAGG...TGGGTGGTCCTGCCAGAGGGAATCTGGTTCCTGGGAGTCAGGGTCCTCCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp GAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATCTGCCCACTGGGGCCTGCATGCCGAACCACTaGTCCTGGTCTGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: EPVLCVAIICSSDLPTGACMPNH*SWSAHW
Trigger: CCAGTGGGCAGACCAGGAGCAGTGGTTCGGCATGCA...GGCCCCAGTGGGCAGATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTTCAGCTGGATGGCCTTaGCACCTAAGTACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QPLPLPRQSGQQASLRKLSAGWP*HLSTGP
Trigger: GGGCCCTGTACTTAGGTGCCAAGGCCATCCAGCTGA...AAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp GCCCACGCCGGGCAGGAGCTCCGCGCCACTGAAGCAACTTCAGGATCACAGCCTAGGACACAGTCACTCTaGTTGGCCAGCGCATTTCTC +
Preference number: 4 (lower is better)
Translates to: AHAGQELRATEATSGSQPRTQSL*LASAFL
Trigger: GAGAAATGCGCTGGCCAACCAGAGTGACTGTGTCCT...AGGCTGTGATCCTGAAGTTGCTTCAGTGGCGCGGAGCTCCTGCCCGGCGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
3UTR CAA 72 bp CCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTaGCTGCCTGGTTTCTCGTGCCAGGCCATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PGSRVSKRPSGN*LPGFSCQAMLH
Trigger: ATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR TCA 90 bp GGCATGCATGCGAGGTCAGAGGGAAACCGTGGAGTCAGTTCTCTCCTGCAACCTTGCTGTCCCCTGCTCTaGAGTACAGGTCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GMHARSEGNRGVSSLLQPCCPLL*STGRPG
Trigger: GCCTGGCCGACCTGTACTTCAGAGCAGGGGACAGCA...AGGTTGCAGGAGAGAACTGACTCCACGGTTTCCCTCTGACCTCGCATGCATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp CACAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACCTGTTGCTGTTCAGCTaGATGGCCTTGGCACCTAAG +
Preference number: 4 (lower is better)
Translates to: HSLSLCPGSRVSKRPSGNLLLFS*MALAPK
Trigger: CTTAGGTGCCAAGGCCATCCAGCTGAACAGCAACAG...GTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp GGCAGGGAGGACCCTGACTCCCAGGAACCAGATTCCCTCTGGCAGGACCACCCACTGTTGCTGTTCAGCTaGATGGCCTTGGCACCTAAG +
Preference number: 4 (lower is better)
Translates to: GREDPDSQEPDSLWQDHPLLLFS*MALAPK
Trigger: CTTAGGTGCCAAGGCCATCCAGCTGAACAGCAACAG...TGGGTGGTCCTGCCAGAGGGAATCTGGTTCCTGGGAGTCAGGGTCCTCCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp TACTTGGAAACAGGCAGGGAGCCCTGCTGTGAGCACACTTCCGACAGCATCTGTTGCTGTCCCCTGCTCTaGAGTACAGGTCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: YLETGREPCCEHTSDSICCCPLL*STGRPG
Trigger: GCCTGGCCGACCTGTACTTCAGAGCAGGGGACAGCA...ACAGATGCTGTCGGAAGTGTGCTCACAGCAGGGCTCCCTGCCTGTTTCCAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTGCTGATCAGAAATGTTaGAGAGGCGGCAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: QPLPLPRQSGQQASLRKLADQKC*RGGSQG
Trigger: ACCTTGGCTGCCGCCTCTTCAACATTTCTGATCAGC...AAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp TACTTGGAAACAGGCAGGGAGCCCTGCTGTGAGCACACTTCCGACAGCATCTGTTCCTGGTCTGCCCACTaGGCTGCCTCACTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: YLETGREPCCEHTSDSICSWSAH*AASLSL
Trigger: CAGCGACAGTGAGGCAGCCCAGTGGGCAGACCAGGA...ACAGATGCTGTCGGAAGTGTGCTCACAGCAGGGCTCCCTGCCTGTTTCCAAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp ACGGAGGGCGAGTCGACCTGCTCCCAGGTGCTGAGGAATAATGCAGGCAGATGCGCTGATCAGAAATGTTaGAGAGGCGGCAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: TEGESTCSQVLRNNAGRCADQKC*RGGSQG
Trigger: ACCTTGGCTGCCGCCTCTTCAACATTTCTGATCAGC...GCATCTGCCTGCATTATTCCTCAGCACCTGGGAGCAGGTCGACTCGCCCTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CAAAAGCACTGCCTCAGCTATCTCCTGGACAAGAGAACGGACGCACGCGACACCGACAAGGCGCAAGCCTaGTGGCCTCCCGAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: QKHCLSYLLDKRTDARDTDKAQA*WPPESV
Trigger: TACACTTTCGGGAGGCCATCAGGCTTGCGCCTTGTC...GGTGTCGCGTGCGTCCGTTCTCTTGTCCAGGAGATAGCTGAGGCAGTGCTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp AGAGCCAGGACCAAAGCATCCTCATTAGTAGCAACCCCACAAAGCCCAGCGTCCCAGCCGCCCTTCTCGTaGCAGGAGGTAGCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: RARTKASSLVATPQSPASQPPFS*QEVAVN
Trigger: GTTTACGGCTACCTCCTGGCACGAGAAGGGCGGCTG...GGACGCTGGGCTTTGTGGGGTTGCTACTAATGAGGATGCTTTGGTCCTGGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp ACGGAGGGCGAGTCGACCTGCTCCCAGGTGCTGAGGAATAATGCAGGCAGATGCCCCGAGAGTAGCGCTTaGTATAGAAGCTGTGGCATC +
Preference number: 4 (lower is better)
Translates to: TEGESTCSQVLRNNAGRCPESSA*YRSCGI
Trigger: GATGCCACAGCTTCTATAGCAAGCGCTACTCTCGGG...GCATCTGCCTGCATTATTCCTCAGCACCTGGGAGCAGGTCGACTCGCCCTCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp GCCCACGCCGGGCAGGAGCTCCGCGCCACTGAAGCAACTTCAGGATCACAGCCTAAGCGTCTGAGCGTTTaGACCCAGAGTTTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: AHAGQELRATEATSGSQPKRLSV*TQSFVN
Trigger: GTTTACAAAACTCTGGGTGCAAACGCTCAGACGCTT...AGGCTGTGATCCTGAAGTTGCTTCAGTGGCGCGGAGCTCCTGCCCGGCGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp AAAAGGGAAAACAAGGTCCTGGAAAGGAATGCTCAGGCCTCGCCCACGCCGGGCCCTGCTGAGCAGCTCTaGTTTCTTCACCACGGCCTT +
Preference number: 4 (lower is better)
Translates to: KRENKVLERNAQASPTPGPAEQL*FLHHGL
Trigger: AAGGCCGTGGTGAAGAAAGCAGAGCTGCTCAGCAGG...GCCCGGCGTGGGCGAGGCCTGAGCATTCCTTTCCAGGACCTTGTTTTCCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp CTCAGGAAACTTGCTGCCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTTCCCCCAGGATCCGATaGAGGACACAGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: LRKLAAWFLVPGHAASCPSPRIR*RTQSLW
Trigger: CCAGAGTGACTGTGTCCTGCATCGGATCCTGGGGGA...AGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp TACTTGGAAACAGGCAGGGAGCCCTGCTGTGAGCACACTTCCGACAGCATCTGTCTGCCTCACTGTCGCTaGCCTCCAGGTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: YLETGREPCCEHTSDSICLPHCR*PPGPLL
Trigger: AAGAAGGGGACCTGGAGGGCAGCGACAGTGAGGCAG...ACAGATGCTGTCGGAAGTGTGCTCACAGCAGGGCTCCCTGCCTGTTTCCAAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTATGCAGAATTCCCAGTaGAAGGCCGCACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QPLPLPRQSGQQASLRKLMQNSQ*KAALWK
Trigger: CTTCCAAAGTGCGGCCTTCCACTGGGAATTCTGCAT...AAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp CAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTTGGTCCATCGCTTCCTaGTACTCGTTCACAGCTACT +
Preference number: 4 (lower is better)
Translates to: QPLPLPRQSGQQASLRKLWSIAS*YSFTAT
Trigger: AGTAGCTGTGAACGAGTACCAGGAAGCGATGGACCA...AAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR TCA 90 bp GACCATCATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCACTTATAGCTTGTGACTaGTGGGCGCTCCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: DHHDYRECGREDPDSQEPLIACD*WALLTS
Trigger: GCTGGTCAGGAGCGCCCATCAGTCACAAGCTATAAG...TGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCATGATGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CATCATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCAGATCCTCCCGAAAGTGTATaGTGGCTTCCTGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: HHDYRECGREDPDSQEPDPPESV*WLPGPS
Trigger: GGAGGGTCCAGGAAGCCATCATACACTTTCGGGAGG...ATCTGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp AGGCTTCCAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTGGACAAGGCGCAAGCCTaGTGGCCTCCCGAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: RLPERVSTRQTTLSHFLLDKAQA*WPPESV
Trigger: TACACTTTCGGGAGGCCATCAGGCTTGCGCCTTGTC...CAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTGGAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp TACTTGGAAACAGGCAGGGAGCCCTGCTGTGAGCACACTTCCGACAGCATCTGTTCCACATCTTCCTCCTaGGTGGCATCCGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: YLETGREPCCEHTSDSICSTSSS*VASVGL
Trigger: GAGTCCCACGGATGCCACTCAGGAGGAAGATGTGGA...ACAGATGCTGTCGGAAGTGTGCTCACAGCAGGGCTCCCTGCCTGTTTCCAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp GAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATCTGCCCACTGGGGCCACAGATGGTGTTGATTaGTCTCGAGTTGTCACCGGT +
Preference number: 4 (lower is better)
Translates to: EPVLCVAIICSSDLPTGATDGVD*SRVVTG
Trigger: ACCGGTGACAACTCGAGAGCAATCAACACCATCTGT...GGCCCCAGTGGGCAGATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp GCGCCACTGAAGCAACTTCAGGATCACAGCCTCTCCCTCTGCCCAGGCAGTCGGACAGATGGTGTTGATTaGTCTCGAGTTGTCACCGGT +
Preference number: 4 (lower is better)
Translates to: APLKQLQDHSLSLCPGSRTDGVD*SRVVTG
Trigger: ACCGGTGACAACTCGAGAGCAATCAACACCATCTGT...CCGACTGCCTGGGCAGAGGGAGAGGCTGTGATCCTGAAGTTGCTTCAGTGGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp GATGCTGAAGGCATCTCAGTGAAGAGCCAGGCTGGTTCATGTGACAGGCTCGGGCCTGCTGAGCAGCTCTaGTTTCTTCACCACGGCCTT +
Preference number: 4 (lower is better)
Translates to: DAEGISVKSQAGSCDRLGPAEQL*FLHHGL
Trigger: AAGGCCGTGGTGAAGAAAGCAGAGCTGCTCAGCAGG...CCCGAGCCTGTCACATGAACCAGCCTGGCTCTTCACTGAGATGCCTTCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp AGGCTTCCAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTGTCCCCCAGGATCCGATaGAGGACACAGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: RLPERVSTRQTTLSHFLLSPRIR*RTQSLW
Trigger: CCAGAGTGACTGTGTCCTGCATCGGATCCTGGGGGA...CAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTGGAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp AGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCCTCTGCCTCTGCATGCCGAACCACTaGTCCTGGTCTGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: RTSLAMQPSTSQLSCLCLCMPNH*SWSAHW
Trigger: CCAGTGGGCAGACCAGGAGCAGTGGTTCGGCATGCA...GAGGCAGAGGCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp TACTTGGAAACAGGCAGGGAGCCCTGCTGTGAGCACACTTCCGACAGCATCTGTTCAGCTGGATGGCCTTaGCACCTAAGTACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: YLETGREPCCEHTSDSICSAGWP*HLSTGP
Trigger: GGGCCCTGTACTTAGGTGCCAAGGCCATCCAGCTGA...ACAGATGCTGTCGGAAGTGTGCTCACAGCAGGGCTCCCTGCCTGTTTCCAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCAGATTCCCATCTTCCTCCTGAGTaGCATCCGTGGGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: HDYRECGREDPDSQEPDSHLPPE*HPWDSP
Trigger: AGGAGAGTCCCACGGATGCCACTCAGGAGGAAGATG...GGAATCTGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp AGAGCCAGGACCAAAGCATCCTCATTAGTAGCAACCCCACAAAGCCCAGCGTCCCTTATAGCTTGTGACTaGTGGGCGCTCCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: RARTKASSLVATPQSPASLIACD*WALLTS
Trigger: GCTGGTCAGGAGCGCCCATCAGTCACAAGCTATAAG...GGACGCTGGGCTTTGTGGGGTTGCTACTAATGAGGATGCTTTGGTCCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR TCA 90 bp AAACTTGCTGCCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTATGCACCCTCCTTATAGCTTGTaGCTGATGGGCGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: KLAAWFLVPGHAASCPMHPPYSL*LMGAPD
Trigger: GTCAGGAGCGCCCATCAGTCACAAGCTATAAGGAGG...GTGCATAGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR TCA 90 bp ACAGCCAGGCACAGAACACAGCCCAGCACATGCAGGAGGGAACCAGGATCAGAAGGGCCTGCTCAAACTTaGGGACAGAGTTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TARHRTQPSTCRREPGSEGPAQT*GQSSCC
Trigger: ACAGCAAGAACTCTGTCCTCAAGTTTGAGCAGGCCC...TTCTGATCCTGGTTCCCTCCTGCATGTGCTGGGCTGTGTTCTGTGCCTGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR TCA 90 bp AAAGGGAAAACAAGGTCCTGGAAAGGAATGCTCAGGCCTCGCCCACGCCGGGCACAGGGCTCTGCATGCTaGTCAGAAATGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KGKTRSWKGMLRPRPRRAQGSAC*SEMLKR
Trigger: CCTCTTCAACATTTCTGATCAGCATGCAGAGCCCTG...TGCCCGGCGTGGGCGAGGCCTGAGCATTCCTTTCCAGGACCTTGTTTTCCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp CAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTGTGAAACAGAGAGTCTaGATGATACACCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QPLPLPRQSGQQASLRKLVKQRV*MIHQEL
Trigger: CAGCTCTTGGTGTATCATGCAGACTCTCTGTTTCAC...AAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp ATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCAGATTCCCCCCGAGAGTAGCGCTTaGTATAGAAGCTGTGGCATC +
Preference number: 4 (lower is better)
Translates to: MTIGSVAGRTLTPRNQIPPESSA*YRSCGI
Trigger: GATGCCACAGCTTCTATAGCAAGCGCTACTCTCGGG...GGGAATCTGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp AATGGTGAGTCTGCAGCTTGGAACTCGCTCAGTCCTCAGCAAAGCAGACAGGTACTGCCTCACTGTCGCTaGCCTCCAGGTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: NGESAAWNSLSPQQSRQVLPHCR*PPGPLL
Trigger: AAGAAGGGGACCTGGAGGGCAGCGACAGTGAGGCAG...TACCTGTCTGCTTTGCTGAGGACTGAGCGAGTTCCAAGCTGCAGACTCACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CTCGGCCGCCCAGCACATGGGAGAAGACAGTATATTTATATCAAACTGTCTAGGGTCTGCCCACTGGGCTaGCTCACTGTCGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGRPAHGRRQYIYIKLSRVCPLG*LTVAAL
Trigger: GAGGGCAGCGACAGTGAGGCAGCCCAGTGGGCAGAC...CCTAGACAGTTTGATATAAATATACTGTCTTCTCCCATGTGCTGGGCGGCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp AACAGTTTATTAGGTGAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATGTCTGCCCACTGGGCTaGCTCACTGTCGCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: NSLLGEPVLCVAIICSSDVCPLG*LTVAAL
Trigger: GAGGGCAGCGACAGTGAGGCAGCCCAGTGGGCAGAC...ATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTCACCTAATAAACTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp GAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATCTGCCCACTGGGGCCTCTGCTGTAAAGCCATaGCGTACTTACTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: EPVLCVAIICSSDLPTGASAVKP*RTYSQH
Trigger: ATGCTGTGAGTAAGTACGCCATGGCTTTACAGCAGA...GGCCCCAGTGGGCAGATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp AGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCCTCTGCCTCTCAGCTGGATGGCCTTaGCACCTAAGTACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RTSLAMQPSTSQLSCLCLSAGWP*HLSTGP
Trigger: GGGCCCTGTACTTAGGTGCCAAGGCCATCCAGCTGA...GAGGCAGAGGCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR CAA 72 bp CAAAGCAGACAGGTAGACACCAGTCCCGACTACTACTaGGAAACAGGCAGGGAGCCCTGCTGTGAGCACACT +
Preference number: 4 (lower is better)
Translates to: QSRQVDTSPDYY*ETGREPCCEHT
Trigger: AGTGTGCTCACAGCAGGGCTCCCTGCCTGTTTCCAAGTAGTAGTCGGGACTGGTGTCTACCTGTCTGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CTCGGCCGCCCAGCACATGGGAGAAGACAGTATATTTATATCAAACTGTCTAGGTGCTGTCCCCTGCTCTaGAGTACAGGTCGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGRPAHGRRQYIYIKLSRCCPLL*STGRPG
Trigger: GCCTGGCCGACCTGTACTTCAGAGCAGGGGACAGCA...CCTAGACAGTTTGATATAAATATACTGTCTTCTCCCATGTGCTGGGCGGCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp ATGTATCTTAGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCAGCCGCACGTTGGAGTaGAGTCCCGCAGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: MYLRTSLAMQPSTSQLSCSRTLE*SPAAAM
Trigger: CATGGCGGCTGCGGGACTGCACTCCAACGTGCGGCT...GCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCTAAGATACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp AAAGGGAAAACAAGGTCCTGGAAAGGAATGCTCAGGCCTCGCCCACGCCGGGCAACTCTGTGGAGTAGATaGAGAATTCCCAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KGKTRSWKGMLRPRPRRATLWSR*RIPSGR
Trigger: CCTTCCACTGGGAATTCTGCATCTACTCCACAGAGT...TGCCCGGCGTGGGCGAGGCCTGAGCATTCCTTTCCAGGACCTTGTTTTCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp CTGTGTACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCCAGCCGCCCTTCTCGTaGCAGGAGGTAGCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: LCTRHKEKKASSTGYVRTQPPFS*QEVAVN
Trigger: GTTTACGGCTACCTCCTGGCACGAGAAGGGCGGCTG...GGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGTACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp GAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATCTGCCCACTGGGGCCAAGTTGGGCACAGTCTaGATCACATTCATCGTCATT +
Preference number: 4 (lower is better)
Translates to: EPVLCVAIICSSDLPTGAKLGTV*ITFIVI
Trigger: AATGACGATGAATGTGATCCAGACTGTGCCCAACTT...GGCCCCAGTGGGCAGATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCAGATTCCTTGAGTAACAGAGCCTaGACGCTGTTGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: HDYRECGREDPDSQEPDSLSNRA*TLLLFS
Trigger: GCTGAACAGCAACAGCGTCCAGGCTCTGTTACTCAA...GGAATCTGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp GACCATCATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCATTGAGTAACAGAGCCTaGACGCTGTTGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: DHHDYRECGREDPDSQEPLSNRA*TLLLFS
Trigger: GCTGAACAGCAACAGCGTCCAGGCTCTGTTACTCAA...TGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCATGATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp AACAGTTTATTAGGTGAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATTCCTGGTCTGCCCACTaGGCTGCCTCACTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: NSLLGEPVLCVAIICSSDSWSAH*AASLSL
Trigger: CAGCGACAGTGAGGCAGCCCAGTGGGCAGACCAGGA...ATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTCACCTAATAAACTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp AGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCCTCTGCCTCGGGCCTGCTCAAACTTaGGGACAGAGTTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RTSLAMQPSTSQLSCLCLGPAQT*GQSSCC
Trigger: ACAGCAAGAACTCTGTCCTCAAGTTTGAGCAGGCCC...GAGGCAGAGGCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp GTCTGTGACATCTCTTCTTTACCCAAACCTTCCACAAAACTCTGCCTACACAGAAGCCGCACGTTGGAGTaGAGTCCCGCAGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: VCDISSLPKPSTKLCLHRSRTLE*SPAAAM
Trigger: CATGGCGGCTGCGGGACTGCACTCCAACGTGCGGCT...TCTGTGTAGGCAGAGTTTTGTGGAAGGTTTGGGTAAAGAAGAGATGTCACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp AGGCTTCCAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTGTGCTGTTCAGCTGGATaGCCTTGGCACCTAAGTACA +
Preference number: 4 (lower is better)
Translates to: RLPERVSTRQTTLSHFLLCCSAG*PWHLST
Trigger: TGTACTTAGGTGCCAAGGCCATCCAGCTGAACAGCA...CAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTGGAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp AAACTTGCTGCCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTATGCACTGTATGATGGCTTCCTaGACCCTCCCCATGTTCCTA +
Preference number: 4 (lower is better)
Translates to: KLAAWFLVPGHAASCPMHCMMAS*TLPMFL
Trigger: TAGGAACATGGGGAGGGTCCAGGAAGCCATCATACA...GTGCATAGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp CAGAACACAGCCCAGCACATGCAGGAGGGAACCAGGATCAGAACACCAAGGCCAGTTTTGGCTTTCTCCTaGGTCACTGGATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QNTAQHMQEGTRIRTPRPVLAFS*VTGSSR
Trigger: TCTGGAAGATCCAGTGACCCAGGAGAAAGCCAAAAC...TGGCCTTGGTGTTCTGATCCTGGTTCCCTCCTGCATGTGCTGGGCTGTGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp GACCATCATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCAAGTGCTATACTGTACTaGTCCATCGCTTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: DHHDYRECGREDPDSQEPSAILY*SIASWY
Trigger: GTACCAGGAAGCGATGGACCAGTACAGTATAGCACT...TGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCATGATGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp GATGCTGAAGGCATCTCAGTGAAGAGCCAGGCTGGTTCATGTGACAGGCTCGGGGAGACTTCTGGTCATTaGGGTCCAAACTCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: DAEGISVKSQAGSCDRLGETSGH*GPNSVL
Trigger: TAGCACTGAGTTTGGACCCCAATGACCAGAAGTCTC...CCCGAGCCTGTCACATGAACCAGCCTGGCTCTTCACTGAGATGCCTTCAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp ACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGCCTGAGTGGCATCCGTaGGACTCTCCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSHIPSTLICILKGITREPEWHP*DSPPSP
Trigger: TGGAGAAGGAGGAGAGTCCCACGGATGCCACTCAGG...CTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CTGTGTACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCCCTGAGTGGCATCCGTaGGACTCTCCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LCTRHKEKKASSTGYVRTPEWHP*DSPPSP
Trigger: TGGAGAAGGAGGAGAGTCCCACGGATGCCACTCAGG...GGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGTACACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp AGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCCTCTGCCTCGGGAGTTCTTTGTCTTaGAGGGATCCCATCGAGTAC +
Preference number: 4 (lower is better)
Translates to: RTSLAMQPSTSQLSCLCLGSSLS*RDPIEY
Trigger: GTACTCGATGGGATCCCTTCAAGACAAAGAACTCCC...GAGGCAGAGGCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp ACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCATCCATACTGATGGGCGCTCCTaGCCAGCCTTCTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: TRHKEKKASSTGYVRTIHTDGRS*PAFLYR
Trigger: CCTGTACAAGAAGGCTGGTCAGGAGCGCCCATCAGT...ATGGATGGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp AACAGTTTATTAGGTGAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATGACAAGGCGCAAGCCTaGTGGCCTCCCGAAAGTGTA +
Preference number: 4 (lower is better)
Translates to: NSLLGEPVLCVAIICSSDDKAQA*WPPESV
Trigger: TACACTTTCGGGAGGCCATCAGGCTTGCGCCTTGTC...ATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTCACCTAATAAACTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CTCAGGAAACTTGCTGCCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTCTTAAGGCTTTCTTCTaGTGTAAAGCCATGGCGTAC +
Preference number: 4 (lower is better)
Translates to: LRKLAAWFLVPGHAASCPLKAFF*CKAMAY
Trigger: GTACGCCATGGCTTTACAGCAGAAGAAAGCCTTAAG...AGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp AACAGTTTATTAGGTGAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATTCCCCCAGGATCCGATaGAGGACACAGTCACTCTGG +
Preference number: 4 (lower is better)
Translates to: NSLLGEPVLCVAIICSSDSPRIR*RTQSLW
Trigger: CCAGAGTGACTGTGTCCTGCATCGGATCCTGGGGGA...ATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTCACCTAATAAACTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp ACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGACTGTTGCTGTTCAGCTaGATGGCCTTGGCACCTAAG +
Preference number: 4 (lower is better)
Translates to: TLICILKGITREMQMQDGLLLFS*MALAPK
Trigger: CTTAGGTGCCAAGGCCATCCAGCTGAACAGCAACAG...TCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAGGTGTATGATGGCTTCCTaGACCCTCCCCATGTTCCTA +
Preference number: 4 (lower is better)
Translates to: LDLHLERHHTRDADAGRRCMMAS*TLPMFL
Trigger: TAGGAACATGGGGAGGGTCCAGGAAGCCATCATACA...CCTCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp AGGCTTCCAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTGGTTTTGGCTTTCTCCTaGGTCACTGGATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RLPERVSTRQTTLSHFLLVLAFS*VTGSSR
Trigger: TCTGGAAGATCCAGTGACCCAGGAGAAAGCCAAAAC...CAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTGGAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CATCATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCAGATGTTTTGGCTTTCTCCTaGGTCACTGGATCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HHDYRECGREDPDSQEPDVLAFS*VTGSSR
Trigger: TCTGGAAGATCCAGTGACCCAGGAGAAAGCCAAAAC...ATCTGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp AATGGTGAGTCTGCAGCTTGGAACTCGCTCAGTCCTCAGCAAAGCAGACAGGTAAGGACACAGTCACTCTaGTTGGCCAGCGCATTTCTC +
Preference number: 4 (lower is better)
Translates to: NGESAAWNSLSPQQSRQVRTQSL*LASAFL
Trigger: GAGAAATGCGCTGGCCAACCAGAGTGACTGTGTCCT...TACCTGTCTGCTTTGCTGAGGACTGAGCGAGTTCCAAGCTGCAGACTCACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp AATACATGCAGCCTGCCTCAGGCAAGCTGTTCTTCCGGGTGTGACACTGTTTCAGGGAGTTCTTTGTCTTaGAGGGATCCCATCGAGTAC +
Preference number: 4 (lower is better)
Translates to: NTCSLPQASCSSGCDTVSGSSLS*RDPIEY
Trigger: GTACTCGATGGGATCCCTTCAAGACAAAGAACTCCC...TGAAACAGTGTCACACCCGGAAGAACAGCTTGCCTGAGGCAGGCTGCATGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR TCA 90 bp AAATCTTTAAAAGGGAAAACAAGGTCCTGGAAAGGAATGCTCAGGCCTCGCCCAACTGATGGGCGCTCCTaGCCAGCCTTCTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: KSLKGKTRSWKGMLRPRPTDGRS*PAFLYR
Trigger: CCTGTACAAGAAGGCTGGTCAGGAGCGCCCATCAGT...TGGGCGAGGCCTGAGCATTCCTTTCCAGGACCTTGTTTTCCCTTTTAAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR TCA 90 bp CTGTGTACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCGGGCCTGCTCAAACTTaGGGACAGAGTTCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LCTRHKEKKASSTGYVRTGPAQT*GQSSCC
Trigger: ACAGCAAGAACTCTGTCCTCAAGTTTGAGCAGGCCC...GGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGTACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp ATGGCAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTCCTCCCGAAAGTGTATaGTGGCTTCCTGGACCCTCC +
Preference number: 4 (lower is better)
Translates to: MAIKDSNFTSTLLEAVASPPESV*WLPGPS
Trigger: GGAGGGTCCAGGAAGCCATCATACACTTTCGGGAGG...ACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp CTGATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCAGCCGCACGTTGGAGTaGAGTCCCGCAGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: LIIHNESTSHIPSTLICISRTLE*SPAAAM
Trigger: CATGGCGGCTGCGGGACTGCACTCCAACGTGCGGCT...GATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CAAAAGCACTGCCTCAGCTATCTCCTGGACAAGAGAACGGACGCACGCGACACCACTTACTCACAGCATTaGGGTACTCCTTATCGTGAA +
Preference number: 4 (lower is better)
Translates to: QKHCLSYLLDKRTDARDTTYSQH*GTPYRE
Trigger: TTCACGATAAGGAGTACCGCAATGCTGTGAGTAAGT...GGTGTCGCGTGCGTCCGTTCTCTTGTCCAGGAGATAGCTGAGGCAGTGCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp CATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCAGATTCCACTTACTCACAGCATTaGGGTACTCCTTATCGTGAA +
Preference number: 4 (lower is better)
Translates to: HDYRECGREDPDSQEPDSTYSQH*GTPYRE
Trigger: TTCACGATAAGGAGTACCGCAATGCTGTGAGTAAGT...GGAATCTGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp GACTGCTTGGAGGTTCTGAGTACTGAGTGCTCAAAAGCACTGCCTCAGCTATCTCCCGAGAGTAGCGCTTaGTATAGAAGCTGTGGCATC +
Preference number: 4 (lower is better)
Translates to: DCLEVLSTECSKALPQLSPESSA*YRSCGI
Trigger: GATGCCACAGCTTCTATAGCAAGCGCTACTCTCGGG...AGATAGCTGAGGCAGTGCTTTTGAGCACTCAGTACTCAGAACCTCCAAGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp AATGGTGAGTCTGCAGCTTGGAACTCGCTCAGTCCTCAGCAAAGCAGACAGGTATCCTTCTCCATCTTCTaGATCCCCTCGAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: NGESAAWNSLSPQQSRQVSFSIF*IPSRDF
Trigger: GAAGTCTCTCGAGGGGATGCAGAAGATGGAGAAGGA...TACCTGTCTGCTTTGCTGAGGACTGAGCGAGTTCCAAGCTGCAGACTCACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CAGAACACAGCCCAGCACATGCAGGAGGGAACCAGGATCAGAACACCAAGGCCAAAGTTGGGCACAGTCTaGATCACATTCATCGTCATT +
Preference number: 4 (lower is better)
Translates to: QNTAQHMQEGTRIRTPRPKLGTV*ITFIVI
Trigger: AATGACGATGAATGTGATCCAGACTGTGCCCAACTT...TGGCCTTGGTGTTCTGATCCTGGTTCCCTCCTGCATGTGCTGGGCTGTGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp AATACATGCAGCCTGCCTCAGGCAAGCTGTTCTTCCGGGTGTGACACTGTTTCATGCTGTTCAGCTGGATaGCCTTGGCACCTAAGTACA +
Preference number: 4 (lower is better)
Translates to: NTCSLPQASCSSGCDTVSCCSAG*PWHLST
Trigger: TGTACTTAGGTGCCAAGGCCATCCAGCTGAACAGCA...TGAAACAGTGTCACACCCGGAAGAACAGCTTGCCTGAGGCAGGCTGCATGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp ACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGATGGTCCATCGCTTCCTaGTACTCGTTCACAGCTACT +
Preference number: 4 (lower is better)
Translates to: TLICILKGITREMQMQDGWSIAS*YSFTAT
Trigger: AGTAGCTGTGAACGAGTACCAGGAAGCGATGGACCA...TCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CTGTGTACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCGGGAGTTCTTTGTCTTaGAGGGATCCCATCGAGTAC +
Preference number: 4 (lower is better)
Translates to: LCTRHKEKKASSTGYVRTGSSLS*RDPIEY
Trigger: GTACTCGATGGGATCCCTTCAAGACAAAGAACTCCC...GGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGTACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp ATGTATCTTAGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCCTTATAGCTTGTGACTaGTGGGCGCTCCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: MYLRTSLAMQPSTSQLSCLIACD*WALLTS
Trigger: GCTGGTCAGGAGCGCCCATCAGTCACAAGCTATAAG...GCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCTAAGATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CGCCCAGCACATGGGAGAAGACAGTATATTTATATCAAACTGTCTAGGCCCACACCTCCTTATAGCTTGTaGCTGATGGGCGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RPAHGRRQYIYIKLSRPTPPYSL*LMGAPD
Trigger: GTCAGGAGCGCCCATCAGTCACAAGCTATAAGGAGG...TGTGGGCCTAGACAGTTTGATATAAATATACTGTCTTCTCCCATGTGCTGGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp ACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGCACATTCATCGTCATTaGTGCCACCTCTGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: TSHIPSTLICILKGITREHIHRH*CHLCAF
Trigger: AAAGGCGCAGAGGTGGCATCAATGACGATGAATGTG...CTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CTGTGTACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCCAGGGCTCTGCATGCTaGTCAGAAATGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LCTRHKEKKASSTGYVRTQGSAC*SEMLKR
Trigger: CCTCTTCAACATTTCTGATCAGCATGCAGAGCCCTG...GGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGTACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAGGCTTAAGGCTTTCTTCTaGTGTAAAGCCATGGCGTAC +
Preference number: 4 (lower is better)
Translates to: LDLHLERHHTRDADAGRRLKAFF*CKAMAY
Trigger: GTACGCCATGGCTTTACAGCAGAAGAAAGCCTTAAG...CCTCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp ACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAACTCTGTGGAGTAGATaGAGAATTCCCAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TLICILKGITREMQMQDGTLWSR*RIPSGR
Trigger: CCTTCCACTGGGAATTCTGCATCTACTCCACAGAGT...TCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTCAGGTCCAGCATCTGGGCCTaGTCAAACTTGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: QLKILTSLALCWRQWPVRSSIWA*SNLRTE
Trigger: CTCTGTCCTCAAGTTTGAGCAGGCCCAGATGCTGGA...CCTGACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp AACAGTTTATTAGGTGAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATTCCAGCATCTGGGCCTaGTCAAACTTGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: NSLLGEPVLCVAIICSSDSSIWA*SNLRTE
Trigger: CTCTGTCCTCAAGTTTGAGCAGGCCCAGATGCTGGA...ATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTCACCTAATAAACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp ATGTATCTTAGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCCCTGCTGAGCAGCTCTaGTTTCTTCACCACGGCCTT +
Preference number: 4 (lower is better)
Translates to: MYLRTSLAMQPSTSQLSCPAEQL*FLHHGL
Trigger: AAGGCCGTGGTGAAGAAAGCAGAGCTGCTCAGCAGG...GCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCTAAGATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CTGTGTACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCATGCAGAATTCCCAGTaGAAGGCCGCACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LCTRHKEKKASSTGYVRTMQNSQ*KAALWK
Trigger: CTTCCAAAGTGCGGCCTTCCACTGGGAATTCTGCAT...GGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGTACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp ACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGTGTATGATGGCTTCCTaGACCCTCCCCATGTTCCTA +
Preference number: 4 (lower is better)
Translates to: TSHIPSTLICILKGITRECMMAS*TLPMFL
Trigger: TAGGAACATGGGGAGGGTCCAGGAAGCCATCATACA...CTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp AAACTTGCTGCCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTATGCACTATCTAACAGAGTTTTaGCTTTCTCCTGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: KLAAWFLVPGHAASCPMHYLTEF*LSPGSL
Trigger: CAGTGACCCAGGAGAAAGCCAAAACTCTGTTAGATA...GTGCATAGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp CAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTCAGGCACAGTCACTCTGGTTaGCCAGCGCATTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QLKILTSLALCWRQWPVRHSHSG*PAHFSA
Trigger: TGCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTG...CCTGACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp CTCGGCCGCCCAGCACATGGGAGAAGACAGTATATTTATATCAAACTGTCTAGGCACAGTCACTCTGGTTaGCCAGCGCATTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LGRPAHGRRQYIYIKLSRHSHSG*PAHFSA
Trigger: TGCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTG...CCTAGACAGTTTGATATAAATATACTGTCTTCTCCCATGTGCTGGGCGGCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTCAGGCACATTCATCGTCATTaGTGCCACCTCTGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: QLKILTSLALCWRQWPVRHIHRH*CHLCAF
Trigger: AAAGGCGCAGAGGTGGCATCAATGACGATGAATGTG...CCTGACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR TCA 90 bp GACTGCTTGGAGGTTCTGAGTACTGAGTGCTCAAAAGCACTGCCTCAGCTATCTGTGAACAGATGGTGTTaGTTGCTCTCGAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: DCLEVLSTECSKALPQLSVNRWC*LLSSCH
Trigger: GTGACAACTCGAGAGCAATCAACACCATCTGTTCAC...AGATAGCTGAGGCAGTGCTTTTGAGCACTCAGTACTCAGAACCTCCAAGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp CTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAGGACTTACTCACAGCATTaGGGTACTCCTTATCGTGAA +
Preference number: 4 (lower is better)
Translates to: LDLHLERHHTRDADAGRRTYSQH*GTPYRE
Trigger: TTCACGATAAGGAGTACCGCAATGCTGTGAGTAAGT...CCTCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp AATGGTGAGTCTGCAGCTTGGAACTCGCTCAGTCCTCAGCAAAGCAGACAGGTAGAGTTGTCACCGGTGTaGACAAAAGCATACGCTTTA +
Preference number: 4 (lower is better)
Translates to: NGESAAWNSLSPQQSRQVELSPV*TKAYAL
Trigger: TAAAGCGTATGCTTTTGTGCACACCGGTGACAACTC...TACCTGTCTGCTTTGCTGAGGACTGAGCGAGTTCCAAGCTGCAGACTCACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CGCCCAGCACATGGGAGAAGACAGTATATTTATATCAAACTGTCTAGGCCCACATCCAGCATCTGGGCCTaGTCAAACTTGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: RPAHGRRQYIYIKLSRPTSSIWA*SNLRTE
Trigger: CTCTGTCCTCAAGTTTGAGCAGGCCCAGATGCTGGA...TGTGGGCCTAGACAGTTTGATATAAATATACTGTCTTCTCCCATGTGCTGGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTCAGGGACCACCCAGGGCTCTaGATGCTGATCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: QLKILTSLALCWRQWPVRDHPGL*MLIRNV
Trigger: AACATTTCTGATCAGCATGCAGAGCCCTGGGTGGTC...CCTGACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR GCA 90 bp ACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAAAGCGTCTGAGCGTTTaGACCCAGAGTTTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: TLICILKGITREMQMQDGKRLSV*TQSFVN
Trigger: GTTTACAAAACTCTGGGTGCAAACGCTCAGACGCTT...TCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CTCAGGAAACTTGCTGCCTGGTTTCTCGTGCCAGGCCATGCTGCATCCTGTCCTTTTTGTAAACATTGTTaGCCATCACCATTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LRKLAAWFLVPGHAASCPFCKHC*PSPLLL
Trigger: GAGAAGCAATGGTGATGGCCAACAATGTTTACAAAA...AGGACAGGATGCAGCATGGCCTGGCACGAGAAACCAGGCAGCAAGTTTCCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp CGCCCAGCACATGGGAGAAGACAGTATATTTATATCAAACTGTCTAGGCCCACAAGGACACAGTCACTCTaGTTGGCCAGCGCATTTCTC +
Preference number: 4 (lower is better)
Translates to: RPAHGRRQYIYIKLSRPTRTQSL*LASAFL
Trigger: GAGAAATGCGCTGGCCAACCAGAGTGACTGTGTCCT...TGTGGGCCTAGACAGTTTGATATAAATATACTGTCTTCTCCCATGTGCTGGGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CTGTGTACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCGAGACTTCTGGTCATTaGGGTCCAAACTCAGTGCTA +
Preference number: 4 (lower is better)
Translates to: LCTRHKEKKASSTGYVRTETSGH*GPNSVL
Trigger: TAGCACTGAGTTTGGACCCCAATGACCAGAAGTCTC...GGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGTACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTCCTCCTTATAGCTTGTaGCTGATGGGCGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: PTSYCADSVLIIHNESTSPPYSL*LMGAPD
Trigger: GTCAGGAGCGCCCATCAGTCACAAGCTATAAGGAGG...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp ATGTATCTTAGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCCACATTCATCGTCATTaGTGCCACCTCTGCGCCTTT +
Preference number: 4 (lower is better)
Translates to: MYLRTSLAMQPSTSQLSCHIHRH*CHLCAF
Trigger: AAAGGCGCAGAGGTGGCATCAATGACGATGAATGTG...GCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCTAAGATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp AACAGTTTATTAGGTGAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATGTGAACAGATGGTGTTaGTTGCTCTCGAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: NSLLGEPVLCVAIICSSDVNRWC*LLSSCH
Trigger: GTGACAACTCGAGAGCAATCAACACCATCTGTTCAC...ATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTCACCTAATAAACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CGCCCAGCACATGGGAGAAGACAGTATATTTATATCAAACTGTCTAGGCCCACACAGGGCTCTGCATGCTaGTCAGAAATGTTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: RPAHGRRQYIYIKLSRPTQGSAC*SEMLKR
Trigger: CCTCTTCAACATTTCTGATCAGCATGCAGAGCCCTG...TGTGGGCCTAGACAGTTTGATATAAATATACTGTCTTCTCCCATGTGCTGGGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp AACAGTTTATTAGGTGAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATACAGATGGTGTTGATTaGTCTCGAGTTGTCACCGGT +
Preference number: 4 (lower is better)
Translates to: NSLLGEPVLCVAIICSSDTDGVD*SRVVTG
Trigger: ACCGGTGACAACTCGAGAGCAATCAACACCATCTGT...ATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTCACCTAATAAACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp ATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGCAGCCGCCCTTCTCGTaGCAGGAGGTAGCCGTAAAC +
Preference number: 4 (lower is better)
Translates to: IIHNESTSHIPSTLICILQPPFS*QEVAVN
Trigger: GTTTACGGCTACCTCCTGGCACGAGAAGGGCGGCTG...CAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp ATGTATCTTAGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCGACCACCCAGGGCTCTaGATGCTGATCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: MYLRTSLAMQPSTSQLSCDHPGL*MLIRNV
Trigger: AACATTTCTGATCAGCATGCAGAGCCCTGGGTGGTC...GCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCTAAGATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp ACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGAAGCGTCTGAGCGTTTaGACCCAGAGTTTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: TSHIPSTLICILKGITREKRLSV*TQSFVN
Trigger: GTTTACAAAACTCTGGGTGCAAACGCTCAGACGCTT...CTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp ACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGATATCTAACAGAGTTTTaGCTTTCTCCTGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: TLICILKGITREMQMQDGYLTEF*LSPGSL
Trigger: CAGTGACCCAGGAGAAAGCCAAAACTCTGTTAGATA...TCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp ATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGTCCACATCTTCCTCCTaGGTGGCATCCGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: IIHNESTSHIPSTLICILSTSSS*VASVGL
Trigger: GAGTCCCACGGATGCCACTCAGGAGGAAGATGTGGA...CAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp ACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCATCCATGTGAAACAGAGAGTCTaGATGATACACCAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TRHKEKKASSTGYVRTIHVKQRV*MIHQEL
Trigger: CAGCTCTTGGTGTATCATGCAGACTCTCTGTTTCAC...ATGGATGGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CTCGGCCGCCCAGCACATGGGAGAAGACAGTATATTTATATCAAACTGTCTAGGCTTAAGGCTTTCTTCTaGTGTAAAGCCATGGCGTAC +
Preference number: 4 (lower is better)
Translates to: LGRPAHGRRQYIYIKLSRLKAFF*CKAMAY
Trigger: GTACGCCATGGCTTTACAGCAGAAGAAAGCCTTAAG...CCTAGACAGTTTGATATAAATATACTGTCTTCTCCCATGTGCTGGGCGGCCGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CGCCCAGCACATGGGAGAAGACAGTATATTTATATCAAACTGTCTAGGCCCACAACTCTGTGGAGTAGATaGAGAATTCCCAGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: RPAHGRRQYIYIKLSRPTTLWSR*RIPSGR
Trigger: CCTTCCACTGGGAATTCTGCATCTACTCCACAGAGT...TGTGGGCCTAGACAGTTTGATATAAATATACTGTCTTCTCCCATGTGCTGGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTCAGGGAGTTGTCACCGGTGTaGACAAAAGCATACGCTTTA +
Preference number: 4 (lower is better)
Translates to: QLKILTSLALCWRQWPVRELSPV*TKAYAL
Trigger: TAAAGCGTATGCTTTTGTGCACACCGGTGACAACTC...CCTGACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp GTCTGTGACATCTCTTCTTTACCCAAACCTTCCACAAAACTCTGCCTACACAGATTGAGTAACAGAGCCTaGACGCTGTTGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VCDISSLPKPSTKLCLHRLSNRA*TLLLFS
Trigger: GCTGAACAGCAACAGCGTCCAGGCTCTGTTACTCAA...TCTGTGTAGGCAGAGTTTTGTGGAAGGTTTGGGTAAAGAAGAGATGTCACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp ACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGTATCTAACAGAGTTTTaGCTTTCTCCTGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: TSHIPSTLICILKGITREYLTEF*LSPGSL
Trigger: CAGTGACCCAGGAGAAAGCCAAAACTCTGTTAGATA...CTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp ATGGCAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTAGTGCTATACTGTACTaGTCCATCGCTTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: MAIKDSNFTSTLLEAVASSAILY*SIASWY
Trigger: GTACCAGGAAGCGATGGACCAGTACAGTATAGCACT...ACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTCCCTCGAGAGACTTCTaGTCATTGGGGTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: PTSYCADSVLIIHNESTSPSRDF*SLGSKL
Trigger: GAGTTTGGACCCCAATGACCAGAAGTCTCTCGAGGG...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR CAA 72 bp GACCTCGTCCATTTATCATGTATCTTAGGACAAGTCTaGCTATGCAGCCCAGCACATCTCAACTGTCATGCC +
Preference number: 4 (lower is better)
Translates to: DLVHLSCILGQV*LCSPAHLNCHA
Trigger: GGCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCTAAGATACATGATAAATGGACGAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CTGATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCGCTGATCAGAAATGTTaGAGAGGCGGCAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LIIHNESTSHIPSTLICIADQKC*RGGSQG
Trigger: ACCTTGGCTGCCGCCTCTTCAACATTTCTGATCAGC...GATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp ATGTATCTTAGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCGAGTTGTCACCGGTGTaGACAAAAGCATACGCTTTA +
Preference number: 4 (lower is better)
Translates to: MYLRTSLAMQPSTSQLSCELSPV*TKAYAL
Trigger: TAAAGCGTATGCTTTTGTGCACACCGGTGACAACTC...GCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCTAAGATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTGACCACCCAGGGCTCTaGATGCTGATCAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: PTSYCADSVLIIHNESTSDHPGL*MLIRNV
Trigger: AACATTTCTGATCAGCATGCAGAGCCCTGGGTGGTC...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR GCA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTTCCTTCTCCATCTTCTaGATCCCCTCGAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: PTSYCADSVLIIHNESTSSFSIF*IPSRDF
Trigger: GAAGTCTCTCGAGGGGATGCAGAAGATGGAGAAGGA...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp AAATCTTTAAAAGGGAAAACAAGGTCCTGGAAAGGAATGCTCAGGCCTCGCCCATCTGCTGTAAAGCCATaGCGTACTTACTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: KSLKGKTRSWKGMLRPRPSAVKP*RTYSQH
Trigger: ATGCTGTGAGTAAGTACGCCATGGCTTTACAGCAGA...TGGGCGAGGCCTGAGCATTCCTTTCCAGGACCTTGTTTTCCCTTTTAAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CCA 90 bp ACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCATCCATAAGTTGGGCACAGTCTaGATCACATTCATCGTCATT +
Preference number: 4 (lower is better)
Translates to: TRHKEKKASSTGYVRTIHKLGTV*ITFIVI
Trigger: AATGACGATGAATGTGATCCAGACTGTGCCCAACTT...ATGGATGGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR TCA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTGTGAACAGATGGTGTTaGTTGCTCTCGAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: PTSYCADSVLIIHNESTSVNRWC*LLSSCH
Trigger: GTGACAACTCGAGAGCAATCAACACCATCTGTTCAC...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp ATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGCACAGTCACTCTGGTTaGCCAGCGCATTTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: IIHNESTSHIPSTLICILHSHSG*PAHFSA
Trigger: TGCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTG...CAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CTGATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCTGGTCCATCGCTTCCTaGTACTCGTTCACAGCTACT +
Preference number: 4 (lower is better)
Translates to: LIIHNESTSHIPSTLICIWSIAS*YSFTAT
Trigger: AGTAGCTGTGAACGAGTACCAGGAAGCGATGGACCA...GATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAATCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTAGTGCTATACTGTACTaGTCCATCGCTTCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: PTSYCADSVLIIHNESTSSAILY*SIASWY
Trigger: GTACCAGGAAGCGATGGACCAGTACAGTATAGCACT...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
3UTR CAA 72 bp ATTCACAATGAATCAACCTCTCACATTCCTAGCACCTaGATCTGCATCTTGAAAGGCATCACACGCGAGATG +
Preference number: 4 (lower is better)
Translates to: IHNESTSHIPST*ICILKGITREM
Trigger: CATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp ATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGTGCTGTTCAGCTGGATaGCCTTGGCACCTAAGTACA +
Preference number: 4 (lower is better)
Translates to: IIHNESTSHIPSTLICILCCSAG*PWHLST
Trigger: TGTACTTAGGTGCCAAGGCCATCCAGCTGAACAGCA...CAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp ACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCATCCATTTTTGTAAACATTGTTaGCCATCACCATTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TRHKEKKASSTGYVRTIHFCKHC*PSPLLL
Trigger: GAGAAGCAATGGTGATGGCCAACAATGTTTACAAAA...ATGGATGGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp ATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGTCTGCTGTAAAGCCATaGCGTACTTACTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: IIHNESTSHIPSTLICILSAVKP*RTYSQH
Trigger: ATGCTGTGAGTAAGTACGCCATGGCTTTACAGCAGA...CAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CCA 90 bp ATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGTTTTGTAAACATTGTTaGCCATCACCATTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: IIHNESTSHIPSTLICILFCKHC*PSPLLL
Trigger: GAGAAGCAATGGTGATGGCCAACAATGTTTACAAAA...CAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp CACAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACCTGAGGAGCCGCACGTaGGAGTGCAGTCCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: HSLSLCPGSRVSKRPSGNLRSRT*ECSPAA
Trigger: GGCTGCGGGACTGCACTCCAACGTGCGGCTCCTCAG...GTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp GCCCACGCCGGGCAGGAGCTCCGCGCCACTGAAGCAACTTCAGGATCACAGCCTAGAGCCTGGACGCTGTaGCTGTTCAGCTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: AHAGQELRATEATSGSQPRAWTL*LFSWMA
Trigger: GGCCATCCAGCTGAACAGCAACAGCGTCCAGGCTCT...AGGCTGTGATCCTGAAGTTGCTTCAGTGGCGCGGAGCTCCTGCCCGGCGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS GCA 90 bp TTACTCATGGTGAGCAGCAGGCTGCTGAGGAGCCGCACGTTGGAGTaGAGTCCCGCAGCCGCCATGTCCCGCACGTGGTCTATCACACTC +
Preference number: 5 (lower is better)
Translates to: LLMVSSRLLRSRTLE*SPAAAMSRTWSITL
Trigger: GAGTGTGATAGACCACGTGCGGGACATGGCGGCTGCGGGACTGCACTCCAACGTGCGGCTCCTCAGCAGCCTGCTGCTCACCATGAGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp TACTTGGAAACAGGCAGGGAGCCCTGCTGTGAGCACACTTCCGACAGCATCTGTCTGAGGAGCCGCACGTaGGAGTGCAGTCCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: YLETGREPCCEHTSDSICLRSRT*ECSPAA
Trigger: GGCTGCGGGACTGCACTCCAACGTGCGGCTCCTCAG...ACAGATGCTGTCGGAAGTGTGCTCACAGCAGGGCTCCCTGCCTGTTTCCAAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS GCA 90 bp GCTGGATGGCCTTGGCACCTAAGTACAGGGCCCGAGAGTAGCGCTTaGTATAGAAGCTGTGGCATCCGGAGACCACCCAGGGCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: AGWPWHLSTGPESSA*YRSCGIRRPPRALH
Trigger: ATGCAGAGCCCTGGGTGGTCTCCGGATGCCACAGCTTCTATAGCAAGCGCTACTCTCGGGCCCTGTACTTAGGTGCCAAGGCCATCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp CTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAGGCTGAGGAGCCGCACGTaGGAGTGCAGTCCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: LDLHLERHHTRDADAGRRLRSRT*ECSPAA
Trigger: GGCTGCGGGACTGCACTCCAACGTGCGGCTCCTCAG...CCTCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS GCA 90 bp GAGGCGGCAGCCAAGGTTCTCCACATCCTCCAGCCGCCCTTCTCGTaGCAGGAGGTAGCCGTAAACATCCATCCCTCTTATCAAGTAGGG +
Preference number: 5 (lower is better)
Translates to: EAAAKVLHILQPPFS*QEVAVNIHPSYQVG
Trigger: CCCTACTTGATAAGAGGGATGGATGTTTACGGCTACCTCCTGGCACGAGAAGGGCGGCTGGAGGATGTGGAGAACCTTGGCTGCCGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 90 bp GGGGTGTGGGCAAGCACAGGAGAGCTGTACAGTCAGCCTGGGTGCTaGTCGGATGTGGGCTCAGTGCTATACTGTACTGGTCCATCGCTT +
Preference number: 5 (lower is better)
Translates to: GVWASTGELYSQPGC*SDVGSVLYCTGPSL
Trigger: AAGCGATGGACCAGTACAGTATAGCACTGAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTCCTGTGCTTGCCCACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154074.2
CDS GCA 90 bp CATGGGGTGTGGGCAAGCACAGGAGAGCTGTACAGTCAGCCTGGGTaGTGCTCGGATGTGGGCTCAGTGCTATACTGTACTGGTCCATCG +
Preference number: 5 (lower is better)
Translates to: HGVWASTGELYSQPG*CSDVGSVLYCTGPS
Trigger: CGATGGACCAGTACAGTATAGCACTGAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTCCTGTGCTTGCCCACACCCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154074.2
CDS CCA 90 bp ACCCTCCCCATGTTCCTAAGCGCCGCCCCCTTGAGTAACAGAGCCTaGACGCTGTTGCTGTTCAGCTGGATGGCCTTGGCACCTAAGTAC +
Preference number: 5 (lower is better)
Translates to: TLPMFLSAAPLSNRA*TLLLFSWMALAPKY
Trigger: GTACTTAGGTGCCAAGGCCATCCAGCTGAACAGCAACAGCGTCCAGGCTCTGTTACTCAAGGGGGCGGCGCTTAGGAACATGGGGAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 90 bp CAAGGCGCAAGCCTGATGGCCTCCCGAAAGTGTATGATGGCTTCCTaGACCCTCCCCATGTTCCTAAGCGCCGCCCCCTTGAGTAACAGA +
Preference number: 5 (lower is better)
Translates to: QGASLMASRKCMMAS*TLPMFLSAAPLSNR
Trigger: TCTGTTACTCAAGGGGGCGGCGCTTAGGAACATGGGGAGGGTCCAGGAAGCCATCATACACTTTCGGGAGGCCATCAGGCTTGCGCCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 90 bp AAGCCATGGGGTGTGGGCAAGCACAGGAGAGCTGTACAGTCAGCCTaGGTGCTGCTCGGATGTGGGCTCAGTGCTATACTGTACTGGTCC +
Preference number: 5 (lower is better)
Translates to: KPWGVGKHRRAVQSA*VLLGCGLSAILYWS
Trigger: GGACCAGTACAGTATAGCACTGAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTCCTGTGCTTGCCCACACCCCATGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154074.2
CDS-3UTR CAA 90 bp CACAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTCACATTCATCGTCATaGATGCCACCTCTGCGCCTT +
Preference number: 5 (lower is better)
Translates to: HSLSLCPGSRVSKRPSGNSHSSS*MPPLRL
Trigger: AAGGCGCAGAGGTGGCATCAATGACGATGAATGTGA...GTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp GAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATCTGCCCACTGGGGCCTTGAGGACAGAGTTCTaGCTGTCCCCTGCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: EPVLCVAIICSSDLPTGALRTEF*LSPALK
Trigger: CTTCAGAGCAGGGGACAGCAAGAACTCTGTCCTCAA...GGCCCCAGTGGGCAGATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp GCGCCACTGAAGCAACTTCAGGATCACAGCCTCTCCCTCTGCCCAGGCAGTCGGTGGGCCTGCTCAAACTaGAGGACAGAGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: APLKQLQDHSLSLCPGSRWACSN*RTEFLL
Trigger: CAGCAAGAACTCTGTCCTCAAGTTTGAGCAGGCCCA...CCGACTGCCTGGGCAGAGGGAGAGGCTGTGATCCTGAAGTTGCTTCAGTGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp CAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTGTGGAAGGCCGCACTTaGGAAGTCTTACTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: QPLPLPRQSGQQASLRKLVEGRT*EVLLKA
Trigger: AGCCTTAAGTAAGACTTCCAAAGTGCGGCCTTCCAC...AAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp CATCATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCAGATAGAGCCTGGACGCTGTaGCTGTTCAGCTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: HHDYRECGREDPDSQEPDRAWTL*LFSWMA
Trigger: GGCCATCCAGCTGAACAGCAACAGCGTCCAGGCTCT...ATCTGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS TCA 90 bp AAGGGCCAAAGGGCACTGCCGCAGGACCTCCTTATAGCTTGTGACTaGTGGGCGCTCCTGACCAGCCTTCTTGTACAGGTTTGCCAGCAT +
Preference number: 5 (lower is better)
Translates to: KGQRALPQDLLIACD*WALLTSLLVQVCQH
Trigger: ATGCTGGCAAACCTGTACAAGAAGGCTGGTCAGGAGCGCCCATCAGTCACAAGCTATAAGGAGGTCCTGCGGCAGTGCCCTTTGGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 90 bp GAGAGCTGTACAGTCAGCCTGGGTGCTGCTCGGATGTGGGCTCAGTaGTATACTGTACTGGTCCATCGCTTCCTGGTACTCGTTCACAGC +
Preference number: 5 (lower is better)
Translates to: ESCTVSLGAARMWAQ*YTVLVHRFLVLVHS
Trigger: GCTGTGAACGAGTACCAGGAAGCGATGGACCAGTACAGTATAGCACTGAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154074.2
CDS CCA 90 bp CAAGCACAGGAGAGCTGTACAGTCAGCCTGGGTGCTGCTCGGATGTaGGCTCAGTGCTATACTGTACTGGTCCATCGCTTCCTGGTACTC +
Preference number: 5 (lower is better)
Translates to: QAQESCTVSLGAARM*AQCYTVLVHRFLVL
Trigger: GAGTACCAGGAAGCGATGGACCAGTACAGTATAGCACTGAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTCCTGTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154074.2
CDS-3UTR CAA 90 bp CAGCCTCTCCCTCTGCCCAGGCAGTCGGGTCAGCAAGCGTCCCTCAGGAAACTTTGGGAGTTCTTTGTCTaGAAGGGATCCCATCGAGTA +
Preference number: 5 (lower is better)
Translates to: QPLPLPRQSGQQASLRKLWEFFV*KGSHRV
Trigger: TACTCGATGGGATCCCTTCAAGACAAAGAACTCCCA...AAGTTTCCTGAGGGACGCTTGCTGACCCGACTGCCTGGGCAGAGGGAGAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp ACGGAGGGCGAGTCGACCTGCTCCCAGGTGCTGAGGAATAATGCAGGCAGATGCTCACATTCATCGTCATaGATGCCACCTCTGCGCCTT +
Preference number: 5 (lower is better)
Translates to: TEGESTCSQVLRNNAGRCSHSSS*MPPLRL
Trigger: AAGGCGCAGAGGTGGCATCAATGACGATGAATGTGA...GCATCTGCCTGCATTATTCCTCAGCACCTGGGAGCAGGTCGACTCGCCCTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp CATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCAGATTCCGACAGCCAGTCCAAGTaGGGCACAGTCTGGATCACA +
Preference number: 5 (lower is better)
Translates to: HDYRECGREDPDSQEPDSDSQSK*GTVWIT
Trigger: TGTGATCCAGACTGTGCCCAACTTGGACTGGCTGTC...GGAATCTGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS GCA 90 bp TCCTGGTACTCGTTCACAGCTACTAGGAAGTCCCCCAGGATCCGATaGAGGACACAGTCACTCTGGTTGGCCAGCGCATTTCTCAGCAGA +
Preference number: 5 (lower is better)
Translates to: SWYSFTATRKSPRIR*RTQSLWLASAFLSR
Trigger: TCTGCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTGTCCTGCATCGGATCCTGGGGGACTTCCTAGTAGCTGTGAACGAGTACCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 90 bp TCAGCCTGGGTGCTGCTCGGATGTGGGCTCAGTGCTATACTGTACTaGTCCATCGCTTCCTGGTACTCGTTCACAGCTACTAGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: SAWVLLGCGLSAILY*SIASWYSFTATRKS
Trigger: GGACTTCCTAGTAGCTGTGAACGAGTACCAGGAAGCGATGGACCAGTACAGTATAGCACTGAGCCCACATCCGAGCAGCACCCAGGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154074.2
CDS-3UTR CAA 90 bp GACCATCATGACTATAGGGAGTGTGGCAGGGAGGACCCTGACTCCCAGGAACCATGGGCCTGCTCAAACTaGAGGACAGAGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: DHHDYRECGREDPDSQEPWACSN*RTEFLL
Trigger: CAGCAAGAACTCTGTCCTCAAGTTTGAGCAGGCCCA...TGGTTCCTGGGAGTCAGGGTCCTCCCTGCCACACTCCCTATAGTCATGATGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp GGCAGGGAGGACCCTGACTCCCAGGAACCAGATTCCCTCTGGCAGGACCACCCACCTTCTTGTACAGGTTaGCCAGCATCATGTTTATTT +
Preference number: 5 (lower is better)
Translates to: GREDPDSQEPDSLWQDHPPSCTG*PASCLF
Trigger: AAATAAACATGATGCTGGCAAACCTGTACAAGAAGG...TGGGTGGTCCTGCCAGAGGGAATCTGGTTCCTGGGAGTCAGGGTCCTCCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp AGAGCCAGGACCAAAGCATCCTCATTAGTAGCAACCCCACAAAGCCCAGCGTCCTTGAGGACAGAGTTCTaGCTGTCCCCTGCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: RARTKASSLVATPQSPASLRTEF*LSPALK
Trigger: CTTCAGAGCAGGGGACAGCAAGAACTCTGTCCTCAA...GGACGCTGGGCTTTGTGGGGTTGCTACTAATGAGGATGCTTTGGTCCTGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS CCA 90 bp TTGGGGTCCAAACTCAGTGCTATACTGTACTGGTCCATCGCTTCCTaGTACTCGTTCACAGCTACTAGGAAGTCCCCCAGGATCCGATGC +
Preference number: 5 (lower is better)
Translates to: LGSKLSAILYWSIAS*YSFTATRKSPRIRC
Trigger: GCATCGGATCCTGGGGGACTTCCTAGTAGCTGTGAACGAGTACCAGGAAGCGATGGACCAGTACAGTATAGCACTGAGTTTGGACCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp GATGCTGAAGGCATCTCAGTGAAGAGCCAGGCTGGTTCATGTGACAGGCTCGGGTGGGAGTTCTTTGTCTaGAAGGGATCCCATCGAGTA +
Preference number: 5 (lower is better)
Translates to: DAEGISVKSQAGSCDRLGWEFFV*KGSHRV
Trigger: TACTCGATGGGATCCCTTCAAGACAAAGAACTCCCA...CCCGAGCCTGTCACATGAACCAGCCTGGCTCTTCACTGAGATGCCTTCAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp AATGGTGAGTCTGCAGCTTGGAACTCGCTCAGTCCTCAGCAAAGCAGACAGGTAGACAGCCAGTCCAAGTaGGGCACAGTCTGGATCACA +
Preference number: 5 (lower is better)
Translates to: NGESAAWNSLSPQQSRQVDSQSK*GTVWIT
Trigger: TGTGATCCAGACTGTGCCCAACTTGGACTGGCTGTC...TACCTGTCTGCTTTGCTGAGGACTGAGCGAGTTCCAAGCTGCAGACTCACCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp ACAGCCAGGCACAGAACACAGCCCAGCACATGCAGGAGGGAACCAGGATCAGAATTGATTGCTCTCGAGTaGTCACCGGTGTGCACAAAA +
Preference number: 5 (lower is better)
Translates to: TARHRTQPSTCRREPGSELIALE*SPVCTK
Trigger: TTTTGTGCACACCGGTGACAACTCGAGAGCAATCAA...TTCTGATCCTGGTTCCCTCCTGCATGTGCTGGGCTGTGTTCTGTGCCTGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp CTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAGGTGGGCCTGCTCAAACTaGAGGACAGAGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LDLHLERHHTRDADAGRRWACSN*RTEFLL
Trigger: CAGCAAGAACTCTGTCCTCAAGTTTGAGCAGGCCCA...CCTCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp AATACATGCAGCCTGCCTCAGGCAAGCTGTTCTTCCGGGTGTGACACTGTTTCAACACAGTCACTCTGGTaGGCCAGCGCATTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: NTCSLPQASCSSGCDTVSTQSLW*ASAFLS
Trigger: GCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTGT...TGAAACAGTGTCACACCCGGAAGAACAGCTTGCCTGAGGCAGGCTGCATGTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp AGGCTTCCAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTGAGAGACTTCTGGTCATaGGGGTCCAAACTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: RLPERVSTRQTTLSHFLLRDFWS*GSKLSA
Trigger: AGCACTGAGTTTGGACCCCAATGACCAGAAGTCTCT...CAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTGGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS CCA 90 bp GCTACTAGGAAGTCCCCCAGGATCCGATGCAGGACACAGTCACTCTaGTTGGCCAGCGCATTTCTCAGCAGAGCAATTCCATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: ATRKSPRIRCRTQSL*LASAFLSRAIPSSY
Trigger: ATATGAAGATGGAATTGCTCTGCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTGTCCTGCATCGGATCCTGGGGGACTTCCTAGTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp AGGCTTCCAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTGTGGGAGTTCTTTGTCTaGAAGGGATCCCATCGAGTA +
Preference number: 5 (lower is better)
Translates to: RLPERVSTRQTTLSHFLLWEFFV*KGSHRV
Trigger: TACTCGATGGGATCCCTTCAAGACAAAGAACTCCCA...CAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTGGAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp TACTTGGAAACAGGCAGGGAGCCCTGCTGTGAGCACACTTCCGACAGCATCTGTTTGATTGCTCTCGAGTaGTCACCGGTGTGCACAAAA +
Preference number: 5 (lower is better)
Translates to: YLETGREPCCEHTSDSICLIALE*SPVCTK
Trigger: TTTTGTGCACACCGGTGACAACTCGAGAGCAATCAA...ACAGATGCTGTCGGAAGTGTGCTCACAGCAGGGCTCCCTGCCTGTTTCCAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp ACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGACACAGTCACTCTGGTaGGCCAGCGCATTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: TSHIPSTLICILKGITRETQSLW*ASAFLS
Trigger: GCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTGT...CTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS CCA 90 bp TACGCTTTAATCCACACGGACAGCCAGTCCAAGTTGGGCACAGTCTaGATCACATTCATCGTCATTGATGCCACCTCTGCGCCTTTCACA +
Preference number: 5 (lower is better)
Translates to: YALIHTDSQSKLGTV*ITFIVIDATSAPFT
Trigger: TGTGAAAGGCGCAGAGGTGGCATCAATGACGATGAATGTGATCCAGACTGTGCCCAACTTGGACTGGCTGTCCGTGTGGATTAAAGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 90 bp CTAGGAAGTCCCCCAGGATCCGATGCAGGACACAGTCACTCTGGTTaGCCAGCGCATTTCTCAGCAGAGCAATTCCATCTTCATATTTCT +
Preference number: 5 (lower is better)
Translates to: LGSPPGSDAGHSHSG*PAHFSAEQFHLHIS
Trigger: AGAAATATGAAGATGGAATTGCTCTGCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTGTCCTGCATCGGATCCTGGGGGACTTCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp ACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAGTGGAAGGCCGCACTTaGGAAGTCTTACTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: TLICILKGITREMQMQDGVEGRT*EVLLKA
Trigger: AGCCTTAAGTAAGACTTCCAAAGTGCGGCCTTCCAC...TCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp GGCATGCATGCGAGGTCAGAGGGAAACCGTGGAGTCAGTTCTCTCCTGCAACCTTGTCTAGCTTCAGCATaGTGTAACACTCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: GMHARSEGNRGVSSLLQPCLASA*CNTQPF
Trigger: AAATGGCTGAGTGTTACACAATGCTGAAGCTAGACA...AGGTTGCAGGAGAGAACTGACTCCACGGTTTCCCTCTGACCTCGCATGCATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp AGAGCCAGGACCAAAGCATCCTCATTAGTAGCAACCCCACAAAGCCCAGCGTCCAGTGAACAGATGGTGTaGATTGCTCTCGAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: RARTKASSLVATPQSPASSEQMV*IALELS
Trigger: TGACAACTCGAGAGCAATCAACACCATCTGTTCACT...GGACGCTGGGCTTTGTGGGGTTGCTACTAATGAGGATGCTTTGGTCCTGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp AGGCTTCCAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTGAGTGAACAGATGGTGTaGATTGCTCTCGAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: RLPERVSTRQTTLSHFLLSEQMV*IALELS
Trigger: TGACAACTCGAGAGCAATCAACACCATCTGTTCACT...CAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTGGAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS GCA 90 bp CCAGTGGAAGGCCGCACTTTGGAAGTCTTACTTAAGGCTTTCTTCTaGTGTAAAGCCATGGCGTACTTACTCACAGCATTGCGGTACTCC +
Preference number: 5 (lower is better)
Translates to: PVEGRTLEVLLKAFF*CKAMAYLLTALRYS
Trigger: GGAGTACCGCAATGCTGTGAGTAAGTACGCCATGGCTTTACAGCAGAAGAAAGCCTTAAGTAAGACTTCCAAAGTGCGGCCTTCCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp CTGTGTACCCGTCATAAAGAGAAAAAGGCATCGTCCACTGGGTACGTCAGAACCAACAGCTCAGGGTTGTaGTTACTCATGGTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: LCTRHKEKKASSTGYVRTNSSGL*LLMVSS
Trigger: GCTGCTCACCATGAGTAACAACAACCCTGAGCTGTT...GGTTCTGACGTACCCAGTGGACGATGCCTTTTTCTCTTTATGACGGGTACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp ACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGGTGGAAGGCCGCACTTaGGAAGTCTTACTTAAGGCT +
Preference number: 5 (lower is better)
Translates to: TSHIPSTLICILKGITREVEGRT*EVLLKA
Trigger: AGCCTTAAGTAAGACTTCCAAAGTGCGGCCTTCCAC...CTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp AGGCTTCCAGAACGTGTCTCCACCAGACAGACCACCCTGTCCCACTTCTTACTGTGTCTAGCTTCAGCATaGTGTAACACTCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: RLPERVSTRQTTLSHFLLCLASA*CNTQPF
Trigger: AAATGGCTGAGTGTTACACAATGCTGAAGCTAGACA...CAGTAAGAAGTGGGACAGGGTGGTCTGTCTGGTGGAGACACGTTCTGGAAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTAGAGCCTGGACGCTGTaGCTGTTCAGCTGGATGGCC +
Preference number: 5 (lower is better)
Translates to: PTSYCADSVLIIHNESTSRAWTL*LFSWMA
Trigger: GGCCATCCAGCTGAACAGCAACAGCGTCCAGGCTCT...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS GCA 90 bp CTTACTCACAGCATTGCGGTACTCCTTATCGTGAAACAGAGAGTCTaGATGATACACCAAGAGCTGGTACTTCTGCGACGGGGAAAACAG +
Preference number: 5 (lower is better)
Translates to: LTHSIAVLLIVKQRV*MIHQELVLLRRGKQ
Trigger: CTGTTTTCCCCGTCGCAGAAGTACCAGCTCTTGGTGTATCATGCAGACTCTCTGTTTCACGATAAGGAGTACCGCAATGCTGTGAGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 90 bp TCTAGTGAACAGATGGTGTTGATTGCTCTCGAGTTGTCACCGGTGTaGACAAAAGCATACGCTTTAATCCACACGGACAGCCAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: SSEQMVLIALELSPV*TKAYALIHTDSQSK
Trigger: CTTGGACTGGCTGTCCGTGTGGATTAAAGCGTATGCTTTTGTGCACACCGGTGACAACTCGAGAGCAATCAACACCATCTGTTCACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp CTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAGGTGTCTAGCTTCAGCATaGTGTAACACTCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: LDLHLERHHTRDADAGRRCLASA*CNTQPF
Trigger: AAATGGCTGAGTGTTACACAATGCTGAAGCTAGACA...CCTCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp GTCTGTGACATCTCTTCTTTACCCAAACCTTCCACAAAACTCTGCCTACACAGAGACAGCCAGTCCAAGTaGGGCACAGTCTGGATCACA +
Preference number: 5 (lower is better)
Translates to: VCDISSLPKPSTKLCLHRDSQSK*GTVWIT
Trigger: TGTGATCCAGACTGTGCCCAACTTGGACTGGCTGTC...TCTGTGTAGGCAGAGTTTTGTGGAAGGTTTGGGTAAAGAAGAGATGTCACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp ACCTTGATCTGCATCTTGAAAGGCATCACACGCGAGATGCAGATGCAGGACGGAAGTGAACAGATGGTGTaGATTGCTCTCGAGTTGTCA +
Preference number: 5 (lower is better)
Translates to: TLICILKGITREMQMQDGSEQMV*IALELS
Trigger: TGACAACTCGAGAGCAATCAACACCATCTGTTCACT...TCCGTCCTGCATCTGCATCTCGCGTGTGATGCCTTTCAAGATGCAGATCAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp ATGTATCTTAGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCTTGAGGACAGAGTTCTaGCTGTCCCCTGCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: MYLRTSLAMQPSTSQLSCLRTEF*LSPALK
Trigger: CTTCAGAGCAGGGGACAGCAAGAACTCTGTCCTCAA...GCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCTAAGATACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp ATGGCAATTAAAGATTCTAACTTCACTAGCACTCTGCTGGAGGCAGTGGCCAGTAACAGCTCAGGGTTGTaGTTACTCATGGTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: MAIKDSNFTSTLLEAVASNSSGL*LLMVSS
Trigger: GCTGCTCACCATGAGTAACAACAACCCTGAGCTGTT...ACTGGCCACTGCCTCCAGCAGAGTGCTAGTGAAGTTAGAATCTTTAATTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp AACAGTTTATTAGGTGAGCCTGTCCTGTGTGTGGCCATCATCTGCTCCTCAGATTTGATTGCTCTCGAGTaGTCACCGGTGTGCACAAAA +
Preference number: 5 (lower is better)
Translates to: NSLLGEPVLCVAIICSSDLIALE*SPVCTK
Trigger: TTTTGTGCACACCGGTGACAACTCGAGAGCAATCAA...ATCTGAGGAGCAGATGATGGCCACACACAGGACAGGCTCACCTAATAAACTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp ATGTATCTTAGGACAAGTCTTGCTATGCAGCCCAGCACATCTCAACTGTCATGCAGAGACTTCTGGTCATaGGGGTCCAAACTCAGTGCT +
Preference number: 5 (lower is better)
Translates to: MYLRTSLAMQPSTSQLSCRDFWS*GSKLSA
Trigger: AGCACTGAGTTTGGACCCCAATGACCAGAAGTCTCT...GCATGACAGTTGAGATGTGCTGGGCTGCATAGCAAGACTTGTCCTAAGATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS GCA 90 bp AGGCTTTCTTCTGCTGTAAAGCCATGGCGTACTTACTCACAGCATTaGGGTACTCCTTATCGTGAAACAGAGAGTCTGCATGATACACCA +
Preference number: 5 (lower is better)
Translates to: RLSSAVKPWRTYSQH*GTPYRETESLHDTP
Trigger: TGGTGTATCATGCAGACTCTCTGTTTCACGATAAGGAGTACCGCAATGCTGTGAGTAAGTACGCCATGGCTTTACAGCAGAAGAAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp AATACATGCAGCCTGCCTCAGGCAAGCTGTTCTTCCGGGTGTGACACTGTTTCACCTTCTTGTACAGGTTaGCCAGCATCATGTTTATTT +
Preference number: 5 (lower is better)
Translates to: NTCSLPQASCSSGCDTVSPSCTG*PASCLF
Trigger: AAATAAACATGATGCTGGCAAACCTGTACAAGAAGG...TGAAACAGTGTCACACCCGGAAGAACAGCTTGCCTGAGGCAGGCTGCATGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS-3UTR CAA 90 bp AATGGTGAGTCTGCAGCTTGGAACTCGCTCAGTCCTCAGCAAAGCAGACAGGTACCTTCTTGTACAGGTTaGCCAGCATCATGTTTATTT +
Preference number: 5 (lower is better)
Translates to: NGESAAWNSLSPQQSRQVPSCTG*PASCLF
Trigger: AAATAAACATGATGCTGGCAAACCTGTACAAGAAGG...TACCTGTCTGCTTTGCTGAGGACTGAGCGAGTTCCAAGCTGCAGACTCACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp CCCACTTCTTACTGCGCTGACAGTGTTCTGATTATTCACAATGAATCAACCTCTTCACATTCATCGTCATaGATGCCACCTCTGCGCCTT +
Preference number: 5 (lower is better)
Translates to: PTSYCADSVLIIHNESTSSHSSS*MPPLRL
Trigger: AAGGCGCAGAGGTGGCATCAATGACGATGAATGTGA...AGAGGTTGATTCATTGTGAATAATCAGAACACTGTCAGCGCAGTAAGAAGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS-3UTR CAA 90 bp ATTATTCACAATGAATCAACCTCTCACATTCCTAGCACCTTGATCTGCATCTTGACACAGTCACTCTGGTaGGCCAGCGCATTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: IIHNESTSHIPSTLICILTQSLW*ASAFLS
Trigger: GCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTGT...CAAGATGCAGATCAAGGTGCTAGGAATGTGAGAGGTTGATTCATTGTGAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS CCA 90 bp GCACTTTGGAAGTCTTACTTAAGGCTTTCTTCTGCTGTAAAGCCATaGCGTACTTACTCACAGCATTGCGGTACTCCTTATCGTGAAACA +
Preference number: 5 (lower is better)
Translates to: ALWKSYLRLSSAVKP*RTYSQHCGTPYRET
Trigger: TGTTTCACGATAAGGAGTACCGCAATGCTGTGAGTAAGTACGCCATGGCTTTACAGCAGAAGAAAGCCTTAAGTAAGACTTCCAAAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 90 bp TTTTGGGAGTTCTTTGTCTTGAAGGGATCCCATCGAGTACAGCAATaGCATCCTTGTCTAGCTTCAGCATTGTGTAACACTCAGCCATTT +
Preference number: 5 (lower is better)
Translates to: FWEFFVLKGSHRVQQ*HPCLASALCNTQPF
Trigger: AAATGGCTGAGTGTTACACAATGCTGAAGCTAGACAAGGATGCCATTGCTGTACTCGATGGGATCCCTTCAAGACAAAGAACTCCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 72 bp GTGAGCAGCAGGCTGCTGAGGAGCCGCACGTTGGAGTaGAGTCCCGCAGCCGCCATGTCCCGCACGTGGTCT +
Preference number: 6 (lower is better)
Translates to: VSSRLLRSRTLE*SPAAAMSRTWS
Trigger: AGACCACGTGCGGGACATGGCGGCTGCGGGACTGCACTCCAACGTGCGGCTCCTCAGCAGCCTGCTGCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp GAGCCTGGACGCTGTTGCTGTTCAGCTGGATGGCCTTaGCACCTAAGTACAGGGCCCGAGAGTAGCGCTTGC +
Preference number: 6 (lower is better)
Translates to: EPGRCCCSAGWP*HLSTGPESSAC
Trigger: GCAAGCGCTACTCTCGGGCCCTGTACTTAGGTGCCAAGGCCATCCAGCTGAACAGCAACAGCGTCCAGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp AGCCTGATGGCCTCCCGAAAGTGTATGATGGCTTCCTaGACCCTCCCCATGTTCCTAAGCGCCGCCCCCTTG +
Preference number: 6 (lower is better)
Translates to: SLMASRKCMMAS*TLPMFLSAAPL
Trigger: CAAGGGGGCGGCGCTTAGGAACATGGGGAGGGTCCAGGAAGCCATCATACACTTTCGGGAGGCCATCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CAA 72 bp TCCTGGACCCTCCCCATGTTCCTAAGCGCCGCCCCCTaGAGTAACAGAGCCTGGACGCTGTTGCTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: SWTLPMFLSAAP*SNRAWTLLLFS
Trigger: GCTGAACAGCAACAGCGTCCAGGCTCTGTTACTCAAGGGGGCGGCGCTTAGGAACATGGGGAGGGTCCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CAA 90 bp ATGATGGCTTCCTGGACCCTCCCCATGTTCCTAAGCGCCGCCCCCTaGAGTAACAGAGCCTGGACGCTGTTGCTGTTCAGCTGGATGGCC +
Preference number: 6 (lower is better)
Translates to: MMASWTLPMFLSAAP*SNRAWTLLLFSWMA
Trigger: GGCCATCCAGCTGAACAGCAACAGCGTCCAGGCTCTGTTACTCAAGGGGGCGGCGCTTAGGAACATGGGGAGGGTCCAGGAAGCCATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS TCA 72 bp TCCCCACTCCCCTCCATGTCGTCCACATCTTCCTCCTaGGTGGCATCCGTGGGACTCTCCTCCTTCTCCATC +
Preference number: 6 (lower is better)
Translates to: SPLPSMSSTSSS*VASVGLSSFSI
Trigger: GATGGAGAAGGAGGAGAGTCCCACGGATGCCACTCAGGAGGAAGATGTGGACGACATGGAGGGGAGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS GCA 72 bp CCTTGGCACCTAAGTACAGGGCCCGAGAGTAGCGCTTaGTATAGAAGCTGTGGCATCCGGAGACCACCCAGG +
Preference number: 6 (lower is better)
Translates to: PWHLSTGPESSA*YRSCGIRRPPR
Trigger: CCTGGGTGGTCTCCGGATGCCACAGCTTCTATAGCAAGCGCTACTCTCGGGCCCTGTACTTAGGTGCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp GGTGTGGGCAAGCACAGGAGAGCTGTACAGTCAGCCTaGGTGCTGCTCGGATGTGGGCTCAGTGCTATACTG +
Preference number: 6 (lower is better)
Translates to: GVGKHRRAVQSA*VLLGCGLSAIL
Trigger: CAGTATAGCACTGAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTCCTGTGCTTGCCCACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154074.2
CDS CAA 90 bp ATGTTCCTAAGCGCCGCCCCCTTGAGTAACAGAGCCTGGACGCTGTaGCTGTTCAGCTGGATGGCCTTGGCACCTAAGTACAGGGCCCGA +
Preference number: 6 (lower is better)
Translates to: MFLSAAPLSNRAWTL*LFSWMALAPKYRAR
Trigger: TCGGGCCCTGTACTTAGGTGCCAAGGCCATCCAGCTGAACAGCAACAGCGTCCAGGCTCTGTTACTCAAGGGGGCGGCGCTTAGGAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS TCA 72 bp CTGTGGCATCCGGAGACCACCCAGGGCTCTGCATGCTaGTCAGAAATGTTGAAGAGGCGGCAGCCAAGGTTC +
Preference number: 6 (lower is better)
Translates to: LWHPETTQGSAC*SEMLKRRQPRF
Trigger: GAACCTTGGCTGCCGCCTCTTCAACATTTCTGATCAGCATGCAGAGCCCTGGGTGGTCTCCGGATGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp GTAACAGAGCCTGGACGCTGTTGCTGTTCAGCTGGATaGCCTTGGCACCTAAGTACAGGGCCCGAGAGTAGC +
Preference number: 6 (lower is better)
Translates to: VTEPGRCCCSAG*PWHLSTGPESS
Trigger: GCTACTCTCGGGCCCTGTACTTAGGTGCCAAGGCCATCCAGCTGAACAGCAACAGCGTCCAGGCTCTGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS TCA 72 bp AGGGCACTGCCGCAGGACCTCCTTATAGCTTGTGACTaGTGGGCGCTCCTGACCAGCCTTCTTGTACAGGTT +
Preference number: 6 (lower is better)
Translates to: RALPQDLLIACD*WALLTSLLVQV
Trigger: AACCTGTACAAGAAGGCTGGTCAGGAGCGCCCATCAGTCACAAGCTATAAGGAGGTCCTGCGGCAGTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 72 bp GCCAAGGTTCTCCACATCCTCCAGCCGCCCTTCTCGTaGCAGGAGGTAGCCGTAAACATCCATCCCTCTTAT +
Preference number: 6 (lower is better)
Translates to: AKVLHILQPPFS*QEVAVNIHPSY
Trigger: ATAAGAGGGATGGATGTTTACGGCTACCTCCTGGCACGAGAAGGGCGGCTGGAGGATGTGGAGAACCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 72 bp ATAGAAGCTGTGGCATCCGGAGACCACCCAGGGCTCTaGATGCTGATCAGAAATGTTGAAGAGGCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: IEAVASGDHPGL*MLIRNVEEAAA
Trigger: GGCTGCCGCCTCTTCAACATTTCTGATCAGCATGCAGAGCCCTGGGTGGTCTCCGGATGCCACAGCTTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 72 bp ACAGTCAGCCTGGGTGCTGCTCGGATGTGGGCTCAGTaGTATACTGTACTGGTCCATCGCTTCCTGGTACTC +
Preference number: 6 (lower is better)
Translates to: TVSLGAARMWAQ*YTVLVHRFLVL
Trigger: GAGTACCAGGAAGCGATGGACCAGTACAGTATAGCACTGAGCCCACATCCGAGCAGCACCCAGGCTGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154074.2
CDS GCA 72 bp TGGGCAAGCACAGGAGAGCTGTACAGTCAGCCTGGGTaGTGCTCGGATGTGGGCTCAGTGCTATACTGTACT +
Preference number: 6 (lower is better)
Translates to: WASTGELYSQPG*CSDVGSVLYCT
Trigger: AGTACAGTATAGCACTGAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTCCTGTGCTTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154074.2
CDS CCA 72 bp TTGAGTAACAGAGCCTGGACGCTGTTGCTGTTCAGCTaGATGGCCTTGGCACCTAAGTACAGGGCCCGAGAG +
Preference number: 6 (lower is better)
Translates to: LSNRAWTLLLFS*MALAPKYRARE
Trigger: CTCTCGGGCCCTGTACTTAGGTGCCAAGGCCATCCAGCTGAACAGCAACAGCGTCCAGGCTCTGTTACTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp CACTCCCCTCCATGTCGTCCACATCTTCCTCCTGAGTaGCATCCGTGGGACTCTCCTCCTTCTCCATCTTCT +
Preference number: 6 (lower is better)
Translates to: HSPPCRPHLPPE*HPWDSPPSPSS
Trigger: AGAAGATGGAGAAGGAGGAGAGTCCCACGGATGCCACTCAGGAGGAAGATGTGGACGACATGGAGGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS CCA 72 bp GAGAGCTGTACAGTCAGCCTGGGTGCTGCTCGGATGTaGGCTCAGTGCTATACTGTACTGGTCCATCGCTTC +
Preference number: 6 (lower is better)
Translates to: ESCTVSLGAARM*AQCYTVLVHRF
Trigger: GAAGCGATGGACCAGTACAGTATAGCACTGAGCCCACATCCGAGCAGCACCCAGGCTGACTGTACAGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154074.2
CDS CAA 72 bp AGCATCTGGGCCTGCTCAAACTTGAGGACAGAGTTCTaGCTGTCCCCTGCTCTGAAGTACAGGTCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SIWACSNLRTEF*LSPALKYRSAR
Trigger: CCTGGCCGACCTGTACTTCAGAGCAGGGGACAGCAAGAACTCTGTCCTCAAGTTTGAGCAGGCCCAGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 72 bp TCGTTCACAGCTACTAGGAAGTCCCCCAGGATCCGATaGAGGACACAGTCACTCTGGTTGGCCAGCGCATTT +
Preference number: 6 (lower is better)
Translates to: SFTATRKSPRIR*RTQSLWLASAF
Trigger: AAATGCGCTGGCCAACCAGAGTGACTGTGTCCTGCATCGGATCCTGGGGGACTTCCTAGTAGCTGTGAACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp CCCCCAGGATCCGATGCAGGACACAGTCACTCTGGTTaGCCAGCGCATTTCTCAGCAGAGCAATTCCATCTT +
Preference number: 6 (lower is better)
Translates to: PPGSDAGHSHSG*PAHFSAEQFHL
Trigger: AAGATGGAATTGCTCTGCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTGTCCTGCATCGGATCCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp AAGTCCCCCAGGATCCGATGCAGGACACAGTCACTCTaGTTGGCCAGCGCATTTCTCAGCAGAGCAATTCCA +
Preference number: 6 (lower is better)
Translates to: KSPRIRCRTQSL*LASAFLSRAIP
Trigger: TGGAATTGCTCTGCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTGTCCTGCATCGGATCCTGGGGGACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CAA 72 bp AGCTGGTACTTCTGCGACGGGGAAAACAGCTCAGGGTaGTTGTTACTCATGGTGAGCAGCAGGCTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: SWYFCDGENSSG*LLLMVSSRLLR
Trigger: CCTCAGCAGCCTGCTGCTCACCATGAGTAACAACAACCCTGAGCTGTTTTCCCCGTCGCAGAAGTACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CAA 72 bp TCCCCCAGGATCCGATGCAGGACACAGTCACTCTGGTaGGCCAGCGCATTTCTCAGCAGAGCAATTCCATCT +
Preference number: 6 (lower is better)
Translates to: SPRIRCRTQSLW*ASAFLSRAIPS
Trigger: AGATGGAATTGCTCTGCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTGTCCTGCATCGGATCCTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp ATCCACACGGACAGCCAGTCCAAGTTGGGCACAGTCTaGATCACATTCATCGTCATTGATGCCACCTCTGCG +
Preference number: 6 (lower is better)
Translates to: IHTDSQSKLGTV*ITFIVIDATSA
Trigger: CGCAGAGGTGGCATCAATGACGATGAATGTGATCCAGACTGTGCCCAACTTGGACTGGCTGTCCGTGTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp CCGGCCTCTGCGCCAGGGCTTTATCTAACAGAGTTTTaGCTTTCTCCTGGGTCACTGGATCTTCCAGACACA +
Preference number: 6 (lower is better)
Translates to: PASAPGLYLTEF*LSPGSLDLPDT
Trigger: TGTGTCTGGAAGATCCAGTGACCCAGGAGAAAGCCAAAACTCTGTTAGATAAAGCCCTGGCGCAGAGGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp GTGCTGCTCGGATGTGGGCTCAGTGCTATACTGTACTaGTCCATCGCTTCCTGGTACTCGTTCACAGCTACT +
Preference number: 6 (lower is better)
Translates to: VLLGCGLSAILY*SIASWYSFTAT
Trigger: AGTAGCTGTGAACGAGTACCAGGAAGCGATGGACCAGTACAGTATAGCACTGAGCCCACATCCGAGCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154074.2
CDS CCA 72 bp TACCTCAGTGCTATACTGTACTGGTCCATCGCTTCCTaGTACTCGTTCACAGCTACTAGGAAGTCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: YLSAILYWSIAS*YSFTATRKSPR
Trigger: CCTGGGGGACTTCCTAGTAGCTGTGAACGAGTACCAGGAAGCGATGGACCAGTACAGTATAGCACTGAGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000119792.2
CDS CAA 90 bp ACTAGGAAGTCCCCCAGGATCCGATGCAGGACACAGTCACTCTGGTaGGCCAGCGCATTTCTCAGCAGAGCAATTCCATCTTCATATTTC +
Preference number: 6 (lower is better)
Translates to: TRKSPRIRCRTQSLW*ASAFLSRAIPSSYF
Trigger: GAAATATGAAGATGGAATTGCTCTGCTGAGAAATGCGCTGGCCAACCAGAGTGACTGTGTCCTGCATCGGATCCTGGGGGACTTCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp AAACTCAGTGCTATACTGTACTGGTCCATCGCTTCCTaGTACTCGTTCACAGCTACTAGGAAGTCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: KLSAILYWSIAS*YSFTATRKSPR
Trigger: CCTGGGGGACTTCCTAGTAGCTGTGAACGAGTACCAGGAAGCGATGGACCAGTACAGTATAGCACTGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS CCA 72 bp CCATCTTCTGCATCCCCTCGAGAGACTTCTGGTCATTaGGGTCCAAACTCAGTGCTATACTGTACTGGTCCA +
Preference number: 6 (lower is better)
Translates to: PSSASPRETSGH*GPNSVLYCTGP
Trigger: TGGACCAGTACAGTATAGCACTGAGTTTGGACCCCAATGACCAGAAGTCTCTCGAGGGGATGCAGAAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS CAA 72 bp TCCATCTTCTGCATCCCCTCGAGAGACTTCTGGTCATaGGGGTCCAAACTCAGTGCTATACTGTACTGGTCC +
Preference number: 6 (lower is better)
Translates to: SIFCIPSRDFWS*GSKLSAILYWS
Trigger: GGACCAGTACAGTATAGCACTGAGTTTGGACCCCAATGACCAGAAGTCTCTCGAGGGGATGCAGAAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS CAA 90 bp ACAGCCAGTCCAAGTTGGGCACAGTCTGGATCACATTCATCGTCATaGATGCCACCTCTGCGCCTTTCACAGACAGGGATAACAAACCTA +
Preference number: 6 (lower is better)
Translates to: TASPSWAQSGSHSSS*MPPLRLSQTGITNL
Trigger: TAGGTTTGTTATCCCTGTCTGTGAAAGGCGCAGAGGTGGCATCAATGACGATGAATGTGATCCAGACTGTGCCCAACTTGGACTGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 72 bp AGCATTGCGGTACTCCTTATCGTGAAACAGAGAGTCTaGATGATACACCAAGAGCTGGTACTTCTGCGACGG +
Preference number: 6 (lower is better)
Translates to: SIAVLLIVKQRV*MIHQELVLLRR
Trigger: CCGTCGCAGAAGTACCAGCTCTTGGTGTATCATGCAGACTCTCTGTTTCACGATAAGGAGTACCGCAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 72 bp CAGATGGTGTTGATTGCTCTCGAGTTGTCACCGGTGTaGACAAAAGCATACGCTTTAATCCACACGGACAGC +
Preference number: 6 (lower is better)
Translates to: QMVLIALELSPV*TKAYALIHTDS
Trigger: GCTGTCCGTGTGGATTAAAGCGTATGCTTTTGTGCACACCGGTGACAACTCGAGAGCAATCAACACCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp TGGTCATTGGGGTCCAAACTCAGTGCTATACTGTACTaGTCCATCGCTTCCTGGTACTCGTTCACAGCTACT +
Preference number: 6 (lower is better)
Translates to: WSLGSKLSAILY*SIASWYSFTAT
Trigger: AGTAGCTGTGAACGAGTACCAGGAAGCGATGGACCAGTACAGTATAGCACTGAGTTTGGACCCCAATGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS CCA 72 bp TCCTTCTCCATCTTCTGCATCCCCTCGAGAGACTTCTaGTCATTGGGGTCCAAACTCAGTGCTATACTGTAC +
Preference number: 6 (lower is better)
Translates to: SFSIFCIPSRDF*SLGSKLSAILY
Trigger: GTACAGTATAGCACTGAGTTTGGACCCCAATGACCAGAAGTCTCTCGAGGGGATGCAGAAGATGGAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031422.10
ENSMUST00000122010.8
CDS CAA 90 bp TGCACAAAAGCATACGCTTTAATCCACACGGACAGCCAGTCCAAGTaGGGCACAGTCTGGATCACATTCATCGTCATTGATGCCACCTCT +
Preference number: 6 (lower is better)
Translates to: CTKAYALIHTDSQSK*GTVWITFIVIDATS
Trigger: AGAGGTGGCATCAATGACGATGAATGTGATCCAGACTGTGCCCAACTTGGACTGGCTGTCCGTGTGGATTAAAGCGTATGCTTTTGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CAA 72 bp CTGATGGGCGCTCCTGACCAGCCTTCTTGTACAGGTTaGCCAGCATCATGTTTATTTTGGGAGTTCTTTGTC +
Preference number: 6 (lower is better)
Translates to: LMGAPDQPSCTG*PASCLFWEFFV
Trigger: GACAAAGAACTCCCAAAATAAACATGATGCTGGCAAACCTGTACAAGAAGGCTGGTCAGGAGCGCCCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CAA 72 bp GCATACGCTTTAATCCACACGGACAGCCAGTCCAAGTaGGGCACAGTCTGGATCACATTCATCGTCATTGAT +
Preference number: 6 (lower is better)
Translates to: AYALIHTDSQSK*GTVWITFIVID
Trigger: ATCAATGACGATGAATGTGATCCAGACTGTGCCCAACTTGGACTGGCTGTCCGTGTGGATTAAAGCGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 72 bp TCTGCTGTAAAGCCATGGCGTACTTACTCACAGCATTaGGGTACTCCTTATCGTGAAACAGAGAGTCTGCAT +
Preference number: 6 (lower is better)
Translates to: SAVKPWRTYSQH*GTPYRETESLH
Trigger: ATGCAGACTCTCTGTTTCACGATAAGGAGTACCGCAATGCTGTGAGTAAGTACGCCATGGCTTTACAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 72 bp GGCCGCACTTTGGAAGTCTTACTTAAGGCTTTCTTCTaGTGTAAAGCCATGGCGTACTTACTCACAGCATTG +
Preference number: 6 (lower is better)
Translates to: GRTLEVLLKAFF*CKAMAYLLTAL
Trigger: CAATGCTGTGAGTAAGTACGCCATGGCTTTACAGCAGAAGAAAGCCTTAAGTAAGACTTCCAAAGTGCGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS GCA 72 bp AATTTCAGATGGAAGACACTGACTCTGTGGAGTAGATaGAGAATTCCCAGTGGAAGGCCGCACTTTGGAAGT +
Preference number: 6 (lower is better)
Translates to: NFRWKTLTLWSR*RIPSGRPHFGS
Trigger: ACTTCCAAAGTGCGGCCTTCCACTGGGAATTCTGCATCTACTCCACAGAGTCAGTGTCTTCCATCTGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CAA 72 bp GGAGTAGATGCAGAATTCCCAGTGGAAGGCCGCACTTaGGAAGTCTTACTTAAGGCTTTCTTCTGCTGTAAA +
Preference number: 6 (lower is better)
Translates to: GVDAEFPVEGRT*EVLLKAFFCCK
Trigger: TTTACAGCAGAAGAAAGCCTTAAGTAAGACTTCCAAAGTGCGGCCTTCCACTGGGAATTCTGCATCTACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS TCA 72 bp TGCCAGCATCATGTTTATTTTGGGAGTTCTTTGTCTTaGAGGGATCCCATCGAGTACAGCAATGGCATCCTT +
Preference number: 6 (lower is better)
Translates to: CQHHVYFGSSLS*RDPIEYSNGIL
Trigger: AAGGATGCCATTGCTGTACTCGATGGGATCCCTTCAAGACAAAGAACTCCCAAAATAAACATGATGCTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CAA 72 bp TTGCCAGCATCATGTTTATTTTGGGAGTTCTTTGTCTaGAAGGGATCCCATCGAGTACAGCAATGGCATCCT +
Preference number: 6 (lower is better)
Translates to: LPASCLFWEFFV*KGSHRVQQWHP
Trigger: AGGATGCCATTGCTGTACTCGATGGGATCCCTTCAAGACAAAGAACTCCCAAAATAAACATGATGCTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CAA 72 bp TTCTCTAGTGAACAGATGGTGTTGATTGCTCTCGAGTaGTCACCGGTGTGCACAAAAGCATACGCTTTAATC +
Preference number: 6 (lower is better)
Translates to: FSSEQMVLIALE*SPVCTKAYALI
Trigger: GATTAAAGCGTATGCTTTTGTGCACACCGGTGACAACTCGAGAGCAATCAACACCATCTGTTCACTAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8
CDS CCA 72 bp AAGTCTTACTTAAGGCTTTCTTCTGCTGTAAAGCCATaGCGTACTTACTCACAGCATTGCGGTACTCCTTAT +
Preference number: 6 (lower is better)
Translates to: KSYLRLSSAVKP*RTYSQHCGTPY
Trigger: ATAAGGAGTACCGCAATGCTGTGAGTAAGTACGCCATGGCTTTACAGCAGAAGAAAGCCTTAAGTAAGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000031422.10
ENSMUST00000119792.2
ENSMUST00000122010.8