Pregenerated sensors for ANAPC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029176Ensembl transcript IDs: ENSMUST00000031072.14, ENSMUST00000144574.8, ENSMUST00000150682.3
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGTCTTGGTGAGCCTCTGTCTCTGACTCTGACAACACTTCCTCCTTaGTCTTCACAGGCTTCCCGCCAGCCTCCTCCTCATCGTCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: RLGEPLSLTLTTLPP*SSQASRQPPPHRLK Trigger: CTTCAGACGATGAGGAGGAGGCTGGCGGGAAGCCTGTGAAGATCAAGGAGGAAGTGTTGTCAGAGTCAGAGACAGAGGCTCACCAAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR GCA 90 bp | TACTGCGCTCTCATGCTTTCTAGCAGCCTCCAGTGTTTCTCAAAGTaGATGGTGCGTGTGGGGATAATGCTGCCCTGCTCGTCAAGCCTT | + |
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Preference number: 1 (lower is better) Translates to: YCALMLSSSLQCFSK*MVRVGIMLPCSSSL Trigger: AAGGCTTGACGAGCAGGGCAGCATTATCCCCACACGCACCATGCACTTTGAGAAACACTGGAGGCTGCTAGAAAGCATGAGAGCGCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR TCA 90 bp | CTCCTTGATCTTCACAGGCTTCCCGCCAGCCTCCTCCTCATCGTCTaGAGACTCGTCAATCTCCCACTCATCATCGATGTCCATTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: LLDLHRLPASLLLIV*RLVNLPLIIDVHFK Trigger: TTTGAAATGGACATCGATGATGAGTGGGAGATTGACGAGTCTTCAGACGATGAGGAGGAGGCTGGCGGGAAGCCTGTGAAGATCAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR TCA 90 bp | ACTGGCTTTCCCCCACAGCAGCAAGTGCATGAACTCATCCTGCACTaGCGTGGTTGTAGGTTTTTCCTGTACAAACTTGGTAAGACGGGA | + |
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Preference number: 1 (lower is better) Translates to: TGFPPQQQVHELILH*RGCRFFLYKLGKTG Trigger: TCCCGTCTTACCAAGTTTGTACAGGAAAAACCTACAACCACGTCAGTGCAGGATGAGTTCATGCACTTGCTGCTGTGGGGGAAAGCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR GCA 90 bp | CTTAACACACAGGACACTTTTCGAAGGCCGTTCCCAGCAACATACTaGGCTCTCATGCTTTCTAGCAGCCTCCAGTGTTTCTCAAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: LNTQDTFRRPFPATY*ALMLSSSLQCFSKC Trigger: GCACTTTGAGAAACACTGGAGGCTGCTAGAAAGCATGAGAGCGCAGTATGTTGCTGGGAACGGCCTTCGAAAAGTGTCCTGTGTGTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR CCA 90 bp | GGACTTTCTTTCAGGTGGGTGCTGTTTTGGAGGAAGTCATACCACTaGTTTCCTTCTGTGTTAGGGGGTGACACAAGGTCGTCGTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: GLSFRWVLFWRKSYH*FPSVLGGDTRSSSS Trigger: TGAAGACGACGACCTTGTGTCACCCCCTAACACAGAAGGAAACCAGTGGTATGACTTCCTCCAAAACAGCACCCACCTGAAAGAAAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR TCA 90 bp | ATTCAAGTGTACCGCTCCTGCAACAGGAATAAGGAGAATCCCTTTTaGCAGGAATGGCTTGCCTGGCTCTTCAGATCAAAGCTGTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: IQVYRSCNRNKENPF*QEWLAWLFRSKLCL Trigger: CAAACACAGCTTTGATCTGAAGAGCCAGGCAAGCCATTCCTGTCAAAAGGGATTCTCCTTATTCCTGTTGCAGGAGCGGTACACTTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| 3UTR TCA 90 bp | TATTCGTCAGAATCTTCACTGTTATACACCAAGGACAGTGACAACTaGACCAAAATCCTGTCTCTCCCTTCACGTCCCATGGAGTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: YSSESSLLYTKDSDN*TKILSLPSRPMESF Trigger: GAAGGACTCCATGGGACGTGAAGGGAGAGACAGGATTTTGGTTCAGTTGTCACTGTCCTTGGTGTATAACAGTGAAGATTCTGACGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR GCA 90 bp | GTTGTAGGTTTTTCCTGTACAAACTTGGTAAGACGGGAGTCCATCTaGATCAGAATTTCTTCCCATGCTTCACACATACATGTCAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: VVGFSCTNLVRRESI*IRISSHASHIHVSD Trigger: GTCACTGACATGTATGTGTGAAGCATGGGAAGAAATTCTGATGCAGATGGACTCCCGTCTTACCAAGTTTGTACAGGAAAAACCTACAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR TCA 90 bp | CAGTCCATACTCCTAGCATCTTTATATAATGGAATGCAAATTGCTTaGTTCATCGATCTTCCAATTACATCTGCTGGCTTTTGCAAACAC | + |
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Preference number: 1 (lower is better) Translates to: QSILLASLYNGMQIA*FIDLPITSAGFCKH Trigger: GTGTTTGCAAAAGCCAGCAGATGTAATTGGAAGATCGATGAATCAAGCAATTTGCATTCCATTATATAAAGATGCTAGGAGTATGGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGATCTTCACAGGCTTCCCGCCAGCCTCCTCCTCATCGTCTGAAGACTCGTTCTGTGTTAGGGGGTaGCACAAGGTCGTCGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SLIFTGFPPASSSSSEDSFCVRG*HKVVVF Trigger: GAAGACGACGACCTTGTGTCACCCCCTAACACAGAA...CGAGTCTTCAGACGATGAGGAGGAGGCTGGCGGGAAGCCTGTGAAGATCAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGAAGGAGAATCCCTTTTaGCAGGAATGGCTTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VWSTELVPGHPRLHRETQKENPF*QEWLAW Trigger: CCAGGCAAGCCATTCCTGTCAAAAGGGATTCTCCTT...CTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| 3UTR-3UTR TCA 90 bp | CCCACTCATCATCGATGTCCATTTCAAACACCCTCACATGCCGGAGGTTTGAACACAGCAGCAAGTGCATaGACTCATCCTGCACTGACG | + |
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Preference number: 2 (lower is better) Translates to: PTHHRCPFQTPSHAGGLNTAASA*THPALT Trigger: CGTCAGTGCAGGATGAGTTCATGCACTTGCTGCTGT...GTTCAAACCTCCGGCATGTGAGGGTGTTTGAAATGGACATCGATGATGAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTCAGGAAGCACATGGTCCTCTGTCATTCTCAGCATTGCTACATACAGCCAGCAAAGGCCAAAACTaGGAGGCAGAAGCAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: SAQEAHGPLSFSALLHTASKGQN*EAEAGG Trigger: TCCACCTGCTTCTGCCTCCCAGTTTTGGCCTTTGCT...GGCTGTATGTAGCAATGCTGAGAATGACAGAGGACCATGTGCTTCCTGAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR TCA 90 bp | AATCTCTGTGAGTCTGAAGCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCGAGGTTCCAAAGTGCTaGATCACAAGCGTGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: NLCESEASLVYRASPRTSEVPKC*ITSVCP Trigger: AGGACACACGCTTGTGATTCAGCACTTTGGAACCTC...GGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGCTTCAGACTCACAGAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| 3UTR-3UTR TCA 90 bp | TTCGAAGGCCGTTCCCAGCAACATACTGCGCTCTCATGCTTTCTAGCAGCCTCCAAGAGAGCTGAAATGTaGGTAAACTTCCTGGCCATA | + |
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Preference number: 2 (lower is better) Translates to: FEGRSQQHTALSCFLAASKRAEM*VNFLAI Trigger: TATGGCCAGGAAGTTTACTCACATTTCAGCTCTCTT...GGAGGCTGCTAGAAAGCATGAGAGCGCAGTATGTTGCTGGGAACGGCCTTCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCACAGCAGCAAGTGCATGAACTCATCCTGCACTGACGTGGTTGTAGGTTTTGGAGGCAGAAGCAGGTaGATCTCTGGTTTACACAAA | + |
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Preference number: 2 (lower is better) Translates to: PHSSKCMNSSCTDVVVGFGGRSR*ISGLHK Trigger: TTTGTGTAAACCAGAGATCCACCTGCTTCTGCCTCC...AAAACCTACAACCACGTCAGTGCAGGATGAGTTCATGCACTTGCTGCTGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACTCATCATCGATGTCCATTTCAAACACCCTCACATGCCGGAGGTTTGAACAGCTCAGGAAGCACATaGTCCTCTGTCATTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PTHHRCPFQTPSHAGGLNSSGST*SSVILS Trigger: GCTGAGAATGACAGAGGACCATGTGCTTCCTGAGCT...GTTCAAACCTCCGGCATGTGAGGGTGTTTGAAATGGACATCGATGATGAGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR TCA 90 bp | GCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACTGGCAAGGCTATAGATaGTGGTCACAACGTCAAACT | + |
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Preference number: 2 (lower is better) Translates to: ASLVYRASPRTSKATQRNWQGYR*WSQRQT Trigger: AGTTTGACGTTGTGACCATCATCTATAGCCTTGCCA...GTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| 3UTR-3UTR GCA 90 bp | TATACACCAAGGACAGTGACAACTGAACCAAAATCCTGTCTCTCCCTTCACGTCCCCCACAGCAGCAAGTaGATGAACTCATCCTGCACT | + |
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Preference number: 2 (lower is better) Translates to: YTPRTVTTEPKSCLSLHVPHSSK*MNSSCT Trigger: AGTGCAGGATGAGTTCATGCACTTGCTGCTGTGGGG...GACGTGAAGGGAGAGACAGGATTTTGGTTCAGTTGTCACTGTCCTTGGTGTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR GCA 90 bp | CCCACTCATCATCGATGTCCATTTCAAACACCCTCACATGCCGGAGGTTTGAACTTCCCAGCAACATACTaGGCTCTCATGCTTTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: PTHHRCPFQTPSHAGGLNFPATY*ALMLSS Trigger: GCTAGAAAGCATGAGAGCGCAGTATGTTGCTGGGAA...GTTCAAACCTCCGGCATGTGAGGGTGTTTGAAATGGACATCGATGATGAGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR CCA 90 bp | TTCGAAGGCCGTTCCCAGCAACATACTGCGCTCTCATGCTTTCTAGCAGCCTCCCTACTGTCTATAACTTaGAGAAGTTCGTTTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: FEGRSQQHTALSCFLAASLLSIT*RSSFAL Trigger: CAAAGCAAACGAACTTCTCCAAGTTATAGACAGTAG...GGAGGCTGCTAGAAAGCATGAGAGCGCAGTATGTTGCTGGGAACGGCCTTCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR GCA 90 bp | AGACTCGTCAATCTCCCACTCATCATCGATGTCCATTTCAAACACCCTCACATGCAGTGTTTCTCAAAGTaGATGGTGCGTGTGGGGATA | + |
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Preference number: 2 (lower is better) Translates to: RLVNLPLIIDVHFKHPHMQCFSK*MVRVGI Trigger: TATCCCCACACGCACCATGCACTTTGAGAAACACTG...CATGTGAGGGTGTTTGAAATGGACATCGATGATGAGTGGGAGATTGACGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR CAA 90 bp | AACTCATCCTGCACTGACGTGGTTGTAGGTTTTTCCTGTACAAACTaGGTAAGACGGGAGTCCATCTGCATCAGAATTTCTTCCCATGCT | + |
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Preference number: 2 (lower is better) Translates to: NSSCTDVVVGFSCTN*VRRESICIRISSHA Trigger: AGCATGGGAAGAAATTCTGATGCAGATGGACTCCCGTCTTACCAAGTTTGTACAGGAAAAACCTACAACCACGTCAGTGCAGGATGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTCAGGAAGCACATGGTCCTCTGTCATTCTCAGCATTGCTACATACAGCCGAGCCACTCTGTAAGTaGCTTATAACCAGTTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: SAQEAHGPLSFSALLHTAEPLCK*LITSFC Trigger: ACAAAAACTGGTTATAAGTCACTTACAGAGTGGCTC...GGCTGTATGTAGCAATGCTGAGAATGACAGAGGACCATGTGCTTCCTGAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR GCA 90 bp | AGACTCGTCAATCTCCCACTCATCATCGATGTCCATTTCAAACACCCTCACATGAGACGGGAGTCCATCTaGATCAGAATTTCTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: RLVNLPLIIDVHFKHPHMRRESI*IRISSH Trigger: ATGGGAAGAAATTCTGATGCAGATGGACTCCCGTCT...CATGTGAGGGTGTTTGAAATGGACATCGATGATGAGTGGGAGATTGACGAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR GCA 90 bp | TATACACCAAGGACAGTGACAACTGAACCAAAATCCTGTCTCTCCCTTCACGTCTGTCATTCTCAGCATTaGTACATACAGCCACCGAAA | + |
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Preference number: 2 (lower is better) Translates to: YTPRTVTTEPKSCLSLHVCHSQH*YIQPPK Trigger: TTTCGGTGGCTGTATGTAGCAATGCTGAGAATGACA...GACGTGAAGGGAGAGACAGGATTTTGGTTCAGTTGTCACTGTCCTTGGTGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR CCA 90 bp | AATCTCTGTGAGTCTGAAGCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCTTCATGGTGTCCCTTTaGATTTACTCAACTATTCTG | + |
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Preference number: 2 (lower is better) Translates to: NLCESEASLVYRASPRTSFMVSL*IYSTIL Trigger: CAGAATAGTTGAGTAAATCCAAAGGGACACCATGAA...GGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGCTTCAGACTCACAGAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| 3UTR-3UTR CCA 90 bp | TATACACCAAGGACAGTGACAACTGAACCAAAATCCTGTCTCTCCCTTCACGTCAAGCAGGTGGATCTCTaGTTTACACAAAGAGTCCTA | + |
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Preference number: 2 (lower is better) Translates to: YTPRTVTTEPKSCLSLHVKQVDL*FTQRVL Trigger: TAGGACTCTTTGTGTAAACCAGAGATCCACCTGCTT...GACGTGAAGGGAGAGACAGGATTTTGGTTCAGTTGTCACTGTCCTTGGTGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR CCA 90 bp | ATTATAAAGGTCTGGAGCCTCATTGAAATGTTCAGTGAGGAATTCAGCAACAAATCTGAAGTTCAGCACTaGCTTTCCCCCACAGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: IIKVWSLIEMFSEEFSNKSEVQH*LSPTAA Trigger: TGCTGCTGTGGGGGAAAGCCAGTGCTGAACTTCAGA...TTTGTTGCTGAATTCCTCACTGAACATTTCAATGAGGCTCCAGACCTTTATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGGACTACATATTCCTCGTGAGGTCATTTCTGATTTTATACCTTCTTTGCAGAAGTATAATCCTGTaGACTAGTTTCTGGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FLDYIFLVRSFLILYLLCRSIIL*TSFWCS Trigger: AGAGCACCAGAAACTAGTGCACAGGATTATACTTCT...GCAAAGAAGGTATAAAATCAGAAATGACCTCACGAGGAATATGTAGTCCAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| 3UTR-3UTR CCA 90 bp | TCGTTTGCTTTGAGGATGAAAGAACCCACAGCAGTAATAGCATCTTCAATGCCTAGGAATACAGCAGATTaGTTTCAAGCTGAAAATATG | + |
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Preference number: 2 (lower is better) Translates to: SFALRMKEPTAVIASSMPRNTAD*FQAENM Trigger: CATATTTTCAGCTTGAAACCAATCTGCTGTATTCCT...AGGCATTGAAGATGCTATTACTGCTGTGGGTTCTTTCATCCTCAAAGCAAACGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR TCA 72 bp | CTTCACAGGCTTCCCGCCAGCCTCCTCCTCATCGTCTaGAGACTCGTCAATCTCCCACTCATCATCGATGTC | + |
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Preference number: 3 (lower is better) Translates to: LHRLPASLLLIV*RLVNLPLIIDV Trigger: GACATCGATGATGAGTGGGAGATTGACGAGTCTTCAGACGATGAGGAGGAGGCTGGCGGGAAGCCTGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR GCA 72 bp | CTCATGCTTTCTAGCAGCCTCCAGTGTTTCTCAAAGTaGATGGTGCGTGTGGGGATAATGCTGCCCTGCTCG | + |
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Preference number: 3 (lower is better) Translates to: LMLSSSLQCFSK*MVRVGIMLPCS Trigger: CGAGCAGGGCAGCATTATCCCCACACGCACCATGCACTTTGAGAAACACTGGAGGCTGCTAGAAAGCATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR GCA 72 bp | CAGGACACTTTTCGAAGGCCGTTCCCAGCAACATACTaGGCTCTCATGCTTTCTAGCAGCCTCCAGTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: QDTFRRPFPATY*ALMLSSSLQCF Trigger: GAAACACTGGAGGCTGCTAGAAAGCATGAGAGCGCAGTATGTTGCTGGGAACGGCCTTCGAAAAGTGTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR TCA 72 bp | AACTTTGCCAGCCTCCTCCCCGAGGTTCCAAAGTGCTaGATCACAAGCGTGTGTCCTCTATTCAAGTGTACC | + |
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Preference number: 3 (lower is better) Translates to: NFASLLPEVPKC*ITSVCPLFKCT Trigger: GGTACACTTGAATAGAGGACACACGCTTGTGATTCAGCACTTTGGAACCTCGGGGAGGAGGCTGGCAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| 3UTR CCA 72 bp | TTCAGGTGGGTGCTGTTTTGGAGGAAGTCATACCACTaGTTTCCTTCTGTGTTAGGGGGTGACACAAGGTCG | + |
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Preference number: 3 (lower is better) Translates to: FRWVLFWRKSYH*FPSVLGGDTRS Trigger: CGACCTTGTGTCACCCCCTAACACAGAAGGAAACCAGTGGTATGACTTCCTCCAAAACAGCACCCACCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR TCA 72 bp | CCCCCACAGCAGCAAGTGCATGAACTCATCCTGCACTaGCGTGGTTGTAGGTTTTTCCTGTACAAACTTGGT | + |
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Preference number: 3 (lower is better) Translates to: PPQQQVHELILH*RGCRFFLYKLG Trigger: ACCAAGTTTGTACAGGAAAAACCTACAACCACGTCAGTGCAGGATGAGTTCATGCACTTGCTGCTGTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR TCA 72 bp | TACCGCTCCTGCAACAGGAATAAGGAGAATCCCTTTTaGCAGGAATGGCTTGCCTGGCTCTTCAGATCAAAG | + |
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Preference number: 3 (lower is better) Translates to: YRSCNRNKENPF*QEWLAWLFRSK Trigger: CTTTGATCTGAAGAGCCAGGCAAGCCATTCCTGTCAAAAGGGATTCTCCTTATTCCTGTTGCAGGAGCGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| 3UTR CCA 72 bp | AATTTTCTTGGTATCCGCAAGAGCAAAGGCCAAAACTaGGAGGCAGAAGCAGGTGGATCTCTGGTTTACACA | + |
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Preference number: 3 (lower is better) Translates to: NFLGIRKSKGQN*EAEAGGSLVYT Trigger: TGTGTAAACCAGAGATCCACCTGCTTCTGCCTCCCAGTTTTGGCCTTTGCTCTTGCGGATACCAAGAAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR TCA 72 bp | GCTATAGATGATGGTCACAACGTCAAACTGTGCCACTaGAACGGACTATCTCCTAGTGAACTCATGACATCC | + |
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Preference number: 3 (lower is better) Translates to: AIDDGHNVKLCH*NGLSPSELMTS Trigger: GGATGTCATGAGTTCACTAGGAGATAGTCCGTTTCAGTGGCACAGTTTGACGTTGTGACCATCATCTATAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| 3UTR TCA 72 bp | TGCCCTGCTCGTCAAGCCTTGTCGAGTAACTCCCAGTaGACTCATATTCGTCAGAATCTTCACTGTTATACA | + |
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Preference number: 3 (lower is better) Translates to: CPARQALSSNSQ*THIRQNLHCYT Trigger: TGTATAACAGTGAAGATTCTGACGAATATGAGTTCACTGGGAGTTACTCGACAAGGCTTGACGAGCAGGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTCAGGTGGGTGCTGTTTTGGAGGAAGTCATACCACTGGTTTCCTTCTGTTTAGGCAAGAGAAGATaGGACTCATCCTCAGCATTA | + |
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Preference number: 3 (lower is better) Translates to: FFQVGAVLEEVIPLVSFCLGKRR*DSSSAL Trigger: TAATGCTGAGGATGAGTCCAATCTTCTCTTGCCTAA...ACAGAAGGAAACCAGTGGTATGACTTCCTCCAAAACAGCACCCACCTGAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR GCA 72 bp | CACTCATCATCGATGTCCATTTCAAACACCCTCACATaGCGGAGGTTTGAACTTAACACACAGGACACTTTT | + |
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Preference number: 3 (lower is better) Translates to: HSSSMSISNTLT*RRFELNTQDTF Trigger: AAAAGTGTCCTGTGTGTTAAGTTCAAACCTCCGGCATGTGAGGGTGTTTGAAATGGACATCGATGATGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR CCA 72 bp | AACAGCAAAGGACTTTCTTTCAGGTGGGTGCTGTTTTaGAGGAAGTCATACCACTGGTTTCCTTCTGTGTTA | + |
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Preference number: 3 (lower is better) Translates to: NSKGLSFRWVLF*RKSYHWFPSVL Trigger: TAACACAGAAGGAAACCAGTGGTATGACTTCCTCCAAAACAGCACCCACCTGAAAGAAAGTCCTTTGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR-3UTR CAA 90 bp | AGACTCGTCAATCTCCCACTCATCATCGATGTCCATTTCAAACACCCTCACATGTACATCTGCTGGCTTTaGCAAACACTGATCAATAAC | + |
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Preference number: 3 (lower is better) Translates to: RLVNLPLIIDVHFKHPHMYICWL*QTLINN Trigger: GTTATTGATCAGTGTTTGCAAAAGCCAGCAGATGTA...CATGTGAGGGTGTTTGAAATGGACATCGATGATGAGTGGGAGATTGACGAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR TCA 72 bp | ATGAAACTTCTGATTCGCCACCGCTGGAAACCTCTGTaGCCACTGATAATGACTTCAAATCACTTGATAAAC | + |
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Preference number: 3 (lower is better) Translates to: MKLLIRHRWKPL*PLIMTSNHLIN Trigger: GTTTATCAAGTGATTTGAAGTCATTATCAGTGGTCACAGAGGTTTCCAGCGGTGGCGAATCAGAAGTTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| 3UTR GCA 72 bp | ACTGTAAGATTTTATGACCCCAGAAGTATAATCCTGTaGACTAGTTTCTGGTGCTCTGTAAGAACTAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: TVRFYDPRSIIL*TSFWCSVRTNP Trigger: GGGGTTAGTTCTTACAGAGCACCAGAAACTAGTGCACAGGATTATACTTCTGGGGTCATAAAATCTTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| 3UTR TCA 72 bp | TGTGCCACTGAAACGGACTATCTCCTAGTGAACTCATaGCATCCAATTCTAGCTACAGCATCTTTTAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: CATETDYLLVNS*HPILATASFNN Trigger: ATTGTTAAAAGATGCTGTAGCTAGAATTGGATGTCATGAGTTCACTAGGAGATAGTCCGTTTCAGTGGCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| 3UTR TCA 72 bp | GATCTTCCAATTACATCTGCTGGCTTTTGCAAACACTaGTCAATAACGTTCTCCATCCGCCTTTTCACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: DLPITSAGFCKH*SITFSIRLFTK Trigger: TTTTGTGAAAAGGCGGATGGAGAACGTTATTGATCAGTGTTTGCAAAAGCCAGCAGATGTAATTGGAAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| 3UTR GCA 72 bp | TTTCATACTACTGTCTATAACTTGGAGAAGTTCGTTTaGTTTGAGGATGAAAGAACCCACAGCAGTAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: FHTTVYNLEKFV*FEDERTHSSNS Trigger: GCTATTACTGCTGTGGGTTCTTTCATCCTCAAAGCAAACGAACTTCTCCAAGTTATAGACAGTAGTATGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| 3UTR CCA 72 bp | AATGCCTTGAAGTTTTTCATACTACTGTCTATAACTTaGAGAAGTTCGTTTGCTTTGAGGATGAAAGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: NALKFFILLSIT*RSSFALRMKEP Trigger: GGGTTCTTTCATCCTCAAAGCAAACGAACTTCTCCAAGTTATAGACAGTAGTATGAAAAACTTCAAGGCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTATAAAGGTCTGGAGCCTCATTGAAATGTTCAGTGAGGAATTCAGCAACAAACACAAAATAATTTTCTaGGTATCCGCAAGAGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: IIKVWSLIEMFSEEFSNKHKIIF*VSARAK Trigger: CTTTGCTCTTGCGGATACCAAGAAAATTATTTTGTG...TTTGTTGCTGAATTCCTCACTGAACATTTCAATGAGGCTCCAGACCTTTATAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| 3UTR TCA 72 bp | CTCCTAGCATCTTTATATAATGGAATGCAAATTGCTTaGTTCATCGATCTTCCAATTACATCTGCTGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLASLYNGMQIA*FIDLPITSAGF Trigger: AAAGCCAGCAGATGTAATTGGAAGATCGATGAATCAAGCAATTTGCATTCCATTATATAAAGATGCTAGGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| 3UTR CAA 72 bp | GGTCACGAGTCCAACTCAGGGTCAAGTTTCTCCACTTaGATGACTACGTCCGGGTCTAGGGCAGCAGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHESNSGSSFST*MTTSGSRAAAS Trigger: AGACGCTGCTGCCCTAGACCCGGACGTAGTCATCAAAGTGGAGAAACTTGACCCTGAGTTGGACTCGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACATCTCCTGTGGCAGCTaGTTCTCTCCCACCACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ASLVYRASPRTSKATQRNISCGS*FSPTTR Trigger: TCGGGTGGTGGGAGAGAAGCAGCTGCCACAGGAGAT...GTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR TCA 90 bp | GTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGACAGCAGCAAGTGCATaGACTCATCCTGCACTGACG | + |
|
Preference number: 4 (lower is better) Translates to: VWSTELVPGHPRLHRETQTAASA*THPALT Trigger: CGTCAGTGCAGGATGAGTTCATGCACTTGCTGCTGT...CTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | CCCCACAGCAGCAAGTGCATGAACTCATCCTGCACTGACGTGGTTGTAGGTTTTCACCACCCGAAAGGATaGGAAACAGGTCGGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PHSSKCMNSSCTDVVVGFHHPKG*ETGRKA Trigger: CGCTTTCCGACCTGTTTCCCATCCTTTCGGGTGGTG...AAAACCTACAACCACGTCAGTGCAGGATGAGTTCATGCACTTGCTGCTGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| CDS-3UTR GCA 90 bp | TCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGTCTGGACCCCACAGCAGCAAGTaGATGAACTCATCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: STELVPGHPRLHRETQSGPHSSK*MNSSCT Trigger: AGTGCAGGATGAGTTCATGCACTTGCTGCTGTGGGG...TCCAGACTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR TCA 90 bp | TTCGAAGGCCGTTCCCAGCAACATACTGCGCTCTCATGCTTTCTAGCAGCCTCCAAACTCCAAACTCGATaGAAACTTGCAAGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FEGRSQQHTALSCFLAASKLQTR*KLARRC Trigger: GCATCGCCTTGCAAGTTTTCATCGAGTTTGGAGTTT...GGAGGCTGCTAGAAAGCATGAGAGCGCAGTATGTTGCTGGGAACGGCCTTCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACTGTAAGAGCTTCTTCTaGCCTTGTCAGCTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVYRASPRTSKATQRNCKSFF*PCQLRQ Trigger: CTGCCTCAGCTGACAAGGTCAGAAGAAGCTCTTACA...GTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | CAAAGTGCTGAATCACAAGCGTGTGTCCTCTATTCAAGTGTACCGCTCCTGCAACACCACCCGAAAGGATaGGAAACAGGTCGGAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSAESQACVLYSSVPLLQHHPKG*ETGRKA Trigger: CGCTTTCCGACCTGTTTCCCATCCTTTCGGGTGGTG...TTGCAGGAGCGGTACACTTGAATAGAGGACACACGCTTGTGATTCAGCACTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | CGTGTGTCCTCTATTCAAGTGTACCGCTCCTGCAACAGGAATAAGGAGAATCCCTCTGAAGTTCAGCACTaGCTTTCCCCCACAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVSSIQVYRSCNRNKENPSEVQH*LSPTAA Trigger: TGCTGCTGTGGGGGAAAGCCAGTGCTGAACTTCAGA...GGGATTCTCCTTATTCCTGTTGCAGGAGCGGTACACTTGAATAGAGGACACACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR GCA 90 bp | GGGGTGACACAAGGTCGTCGTCTTCATCTTTCAAATACTGACCAACTCTTTCAAATCTCCTGTGGCAGCTaGTTCTCTCCCACCACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GVTQGRRLHLSNTDQLFQISCGS*FSPTTR Trigger: TCGGGTGGTGGGAGAGAAGCAGCTGCCACAGGAGAT...TTGAAAGAGTTGGTCAGTATTTGAAAGATGAAGACGACGACCTTGTGTCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGAGACGGGAGTCCATCTaGATCAGAATTTCTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VWSTELVPGHPRLHRETQRRESI*IRISSH Trigger: ATGGGAAGAAATTCTGATGCAGATGGACTCCCGTCT...CTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | AATCTCTGTGAGTCTGAAGCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAGCTCAGGAAGCACATaGTCCTCTGTCATTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLCESEASLVYRASPRTSSSGST*SSVILS Trigger: GCTGAGAATGACAGAGGACCATGTGCTTCCTGAGCT...GGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGCTTCAGACTCACAGAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | CGTGTGTCCTCTATTCAAGTGTACCGCTCCTGCAACAGGAATAAGGAGAATCCCAGGTGGGTGCTGTTTTaGAGGAAGTCATACCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVSSIQVYRSCNRNKENPRWVLF*RKSYHW Trigger: CCAGTGGTATGACTTCCTCCAAAACAGCACCCACCT...GGGATTCTCCTTATTCCTGTTGCAGGAGCGGTACACTTGAATAGAGGACACACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR TCA 90 bp | GCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACAAACTCCAAACTCGATaGAAACTTGCAAGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLVYRASPRTSKATQRNKLQTR*KLARRC Trigger: GCATCGCCTTGCAAGTTTTCATCGAGTTTGGAGTTT...GTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR GCA 90 bp | GTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGTTTCTTTCAGGTGGGTaGTGTTTTGGAGGAAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VWSTELVPGHPRLHRETQFLSGG*CFGGSH Trigger: ATGACTTCCTCCAAAACAGCACCCACCTGAAAGAAA...CTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR GCA 90 bp | CGTGTGTCCTCTATTCAAGTGTACCGCTCCTGCAACAGGAATAAGGAGAATCCCTTCCCAGCAACATACTaGGCTCTCATGCTTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVSSIQVYRSCNRNKENPFPATY*ALMLSS Trigger: GCTAGAAAGCATGAGAGCGCAGTATGTTGCTGGGAA...GGGATTCTCCTTATTCCTGTTGCAGGAGCGGTACACTTGAATAGAGGACACACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | AATCTCTGTGAGTCTGAAGCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCGAAAATAATCTCCTGTaGCAGCTGCTTCTCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLCESEASLVYRASPRTSENNLL*QLLLSH Trigger: GTGGGAGAGAAGCAGCTGCCACAGGAGATTATTTTC...GGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGCTTCAGACTCACAGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | CGTGTGTCCTCTATTCAAGTGTACCGCTCCTGCAACAGGAATAAGGAGAATCCCGGACTTTCTTTCAGGTaGGTGCTGTTTTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSSIQVYRSCNRNKENPGLSFR*VLFWRK Trigger: CTTCCTCCAAAACAGCACCCACCTGAAAGAAAGTCC...GGGATTCTCCTTATTCCTGTTGCAGGAGCGGTACACTTGAATAGAGGACACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR TCA 90 bp | GCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACAAGAGAGCTGAAATGTaGGTAAACTTCCTGGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ASLVYRASPRTSKATQRNKRAEM*VNFLAI Trigger: TATGGCCAGGAAGTTTACTCACATTTCAGCTCTCTT...GTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR TCA 90 bp | GCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACGGCTTTTGCAAACACTaGTCAATAACGTTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: ASLVYRASPRTSKATQRNGFCKH*SITFSI Trigger: GATGGAGAACGTTATTGATCAGTGTTTGCAAAAGCC...GTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR GCA 90 bp | TCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGTCTGGAAACTCGATGAAAACTTaGAAGGCGATGCAGCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: STELVPGHPRLHRETQSGNSMKT*KAMQQN Trigger: GTTTTGCTGCATCGCCTTGCAAGTTTTCATCGAGTT...TCCAGACTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR GCA 90 bp | TCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGTCTGGATGTCATTCTCAGCATTaGTACATACAGCCACCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: STELVPGHPRLHRETQSGCHSQH*YIQPPK Trigger: TTTCGGTGGCTGTATGTAGCAATGCTGAGAATGACA...TCCAGACTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | AATCTCTGTGAGTCTGAAGCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAGGAAGTCATACCACTaGTTTCCTTCTGTGTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLCESEASLVYRASPRTSRKSYH*FPSVLG Trigger: CCCTAACACAGAAGGAAACCAGTGGTATGACTTCCT...GGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGCTTCAGACTCACAGAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR GCA 90 bp | GCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCAGAATTTCTTCCCATaGTTCACACATACATGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVYRASPRTSKATQRNQNFFP*FTHTCQ Trigger: CTGACATGTATGTGTGAAGCATGGGAAGAAATTCTG...GTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | GCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACTGTACTTTCATTTGGTaGGAAACTCCAAACTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVYRASPRTSKATQRNCTFIW*ETPNSM Trigger: CATCGAGTTTGGAGTTTCCCACCAAATGAAAGTACA...GTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | GTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGCTACTGTCTATAACTTaGAGAAGTTCGTTTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VWSTELVPGHPRLHRETQLLSIT*RSSFAL Trigger: CAAAGCAAACGAACTTCTCCAAGTTATAGACAGTAG...CTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | TCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGTCTGGATCCAATTACATCTGCTaGCTTTTGCAAACACTGATC | + |
|
Preference number: 4 (lower is better) Translates to: STELVPGHPRLHRETQSGSNYIC*LLQTLI Trigger: GATCAGTGTTTGCAAAAGCCAGCAGATGTAATTGGA...TCCAGACTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR TCA 90 bp | CCATTTATTTCTTTGATACACAGACAACTCAGTGTGACCGATACATTCTTAGTCTGTTGGCCAAAGCAATaGGGTCTCGCTTGGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PFISLIHRQLSVTDTFLVCWPKQ*GLAWGT Trigger: GGTCCCCCAAGCGAGACCTCATTGCTTTGGCCAACA...GACTAAGAATGTATCGGTCACACTGAGTTGTCTGTGTATCAAAGAAATAAATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031072.14 ENSMUST00000144574.8 |
||
| CDS-3UTR TCA 90 bp | GATACATTCTTAGTCCATCCACTACGTCTTTTTGCCACATTAACTAACACAATGGCAGCAGCGTCTTGGTaGGCCTCTGTCTCTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: DTFLVHPLRLFATLTNTMAAASW*ASVSDS Trigger: AGAGTCAGAGACAGAGGCTCACCAAGACGCTGCTGC...CATTGTGTTAGTTAATGTGGCAAAAAGACGTAGTGGATGGACTAAGAATGTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR TCA 90 bp | TTCCTGGACTACATATTCCTCGTGAGGTCATTTCTGATTTTATACCTTCTTTGCTTCTGTGTTAGGGGGTaGCACAAGGTCGTCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLDYIFLVRSFLILYLLCFCVRG*HKVVVF Trigger: GAAGACGACGACCTTGTGTCACCCCCTAACACAGAA...GCAAAGAAGGTATAAAATCAGAAATGACCTCACGAGGAATATGTAGTCCAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| 3UTR CAA 72 bp | AAACAGCAAAGGACTTTCTTTCAGGTGGGTGCTGTTTaGGAGGAAGTCATACCACTGGTTTCCTTCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KQQRTFFQVGAV*EEVIPLVSFCV Trigger: AACACAGAAGGAAACCAGTGGTATGACTTCCTCCAAAACAGCACCCACCTGAAAGAAAGTCCTTTGCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGTGCTGAATCACAAGCGTGTGTCCTCTATTCAAGTGTACCGCTCCTGCAAATTCAGCAACAAATGTaGTATCCTTCTGAGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QSAESQACVLYSSVPLLQIQQQM*YPSESS Trigger: AGATGACTCAGAAGGATATCACATTTGTTGCTGAAT...TTGCAGGAGCGGTACACTTGAATAGAGGACACACGCTTGTGATTCAGCACTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR TCA 90 bp | CCATTTATTTCTTTGATACACAGACAACTCAGTGTGACCGATACATTCTTAGTCACAACACTTCCTCCTTaGTCTTCACAGGCTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PFISLIHRQLSVTDTFLVTTLPP*SSQASR Trigger: GCGGGAAGCCTGTGAAGATCAAGGAGGAAGTGTTGT...GACTAAGAATGTATCGGTCACACTGAGTTGTCTGTGTATCAAAGAAATAAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGAATTCAGCAACAAATGTGATATCCTTCTGAGTCATCTTGTTCAGCTCGAAAATAATCTCCTGTaGCAGCTGCTTCTCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SEEFSNKCDILLSHLVQLENNLL*QLLLSH Trigger: GTGGGAGAGAAGCAGCTGCCACAGGAGATTATTTTC...GAGCTGAACAAGATGACTCAGAAGGATATCACATTTGTTGCTGAATTCCTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| CDS-3UTR CCA 90 bp | AATCTCTGTGAGTCTGAAGCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCCCATTACTTACAGATTaGGAAATATCAGTATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLCESEASLVYRASPRTSPLLTD*EISVCL Trigger: GAGACATACTGATATTTCCCAATCTGTAAGTAATGG...GGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGCTTCAGACTCACAGAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGAATTCAGCAACAAATGTGATATCCTTCTGAGTCATCTTGTTCAGCTCAACTCGATGAAAACTTaGAAGGCGATGCAGCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SEEFSNKCDILLSHLVQLNSMKT*KAMQQN Trigger: GTTTTGCTGCATCGCCTTGCAAGTTTTCATCGAGTT...GAGCTGAACAAGATGACTCAGAAGGATATCACATTTGTTGCTGAATTCCTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| CDS-3UTR GCA 90 bp | GATACATTCTTAGTCCATCCACTACGTCTTTTTGCCACATTAACTAACACAATGCAGTGTTTCTCAAAGTaGATGGTGCGTGTGGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: DTFLVHPLRLFATLTNTMQCFSK*MVRVGI Trigger: TATCCCCACACGCACCATGCACTTTGAGAAACACTG...CATTGTGTTAGTTAATGTGGCAAAAAGACGTAGTGGATGGACTAAGAATGTATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | TTCCTGGACTACATATTCCTCGTGAGGTCATTTCTGATTTTATACCTTCTTTGCTCCTGTACTTTCATTTaGTGGGAAACTCCAAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLDYIFLVRSFLILYLLCSCTFI*WETPNS Trigger: CGAGTTTGGAGTTTCCCACCAAATGAAAGTACAGGA...GCAAAGAAGGTATAAAATCAGAAATGACCTCACGAGGAATATGTAGTCCAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
||
| CDS-3UTR CCA 90 bp | CATTATAAAACGATGTTAAAACACTGCTTTCCACAGTCACTTCTGTCCAATGCATCCTGTACTTTCATTTaGTGGGAAACTCCAAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: HYKTMLKHCFPQSLLSNASCTFI*WETPNS Trigger: CGAGTTTGGAGTTTCCCACCAAATGAAAGTACAGGA...TGCATTGGACAGAAGTGACTGTGGAAAGCAGTGTTTTAACATCGTTTTATAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
||
| CDS-3UTR TCA 90 bp | GATACATTCTTAGTCCATCCACTACGTCTTTTTGCCACATTAACTAACACAATGGAGCCACTCTGTAAGTaGCTTATAACCAGTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DTFLVHPLRLFATLTNTMEPLCK*LITSFC Trigger: ACAAAAACTGGTTATAAGTCACTTACAGAGTGGCTC...CATTGTGTTAGTTAATGTGGCAAAAAGACGTAGTGGATGGACTAAGAATGTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS-3UTR GCA 90 bp | CCATTTATTTCTTTGATACACAGACAACTCAGTGTGACCGATACATTCTTAGTCTTGGAGAAGTTCGTTTaGTTTGAGGATGAAAGAACC | + |
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Preference number: 4 (lower is better) Translates to: PFISLIHRQLSVTDTFLVLEKFV*FEDERT Trigger: GGTTCTTTCATCCTCAAAGCAAACGAACTTCTCCAA...GACTAAGAATGTATCGGTCACACTGAGTTGTCTGTGTATCAAAGAAATAAATGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS-3UTR CCA 90 bp | GATACATTCTTAGTCCATCCACTACGTCTTTTTGCCACATTAACTAACACAATGAGGAATACAGCAGATTaGTTTCAAGCTGAAAATATG | + |
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Preference number: 4 (lower is better) Translates to: DTFLVHPLRLFATLTNTMRNTAD*FQAENM Trigger: CATATTTTCAGCTTGAAACCAATCTGCTGTATTCCT...CATTGTGTTAGTTAATGTGGCAAAAAGACGTAGTGGATGGACTAAGAATGTATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| 3UTR CAA 72 bp | AAATGCCTTGAAGTTTTTCATACTACTGTCTATAACTaGGAGAAGTTCGTTTGCTTTGAGGATGAAAGAACC | + |
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Preference number: 4 (lower is better) Translates to: KCLEVFHTTVYN*EKFVCFEDERT Trigger: GGTTCTTTCATCCTCAAAGCAAACGAACTTCTCCAAGTTATAGACAGTAGTATGAAAAACTTCAAGGCATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| CDS GCA 90 bp | TCTCGCTTGGGGGACCAGGCCAAGAAAATAATCTCCTGTGGCAGCTaGTTCTCTCCCACCACCCGAAAGGATGGGAAACAGGTCGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SRLGDQAKKIISCGS*FSPTTRKDGKQVGK Trigger: CTTTCCGACCTGTTTCCCATCCTTTCGGGTGGTGGGAGAGAAGCAGCTGCCACAGGAGATTATTTTCTTGGCCTGGTCCCCCAAGCGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031072.14 ENSMUST00000144574.8 |
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| CDS CCA 90 bp | AATGAGGTCTCGCTTGGGGGACCAGGCCAAGAAAATAATCTCCTGTaGCAGCTGCTTCTCTCCCACCACCCGAAAGGATGGGAAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: NEVSLGGPGQENNLL*QLLLSHHPKGWETG Trigger: ACCTGTTTCCCATCCTTTCGGGTGGTGGGAGAGAAGCAGCTGCCACAGGAGATTATTTTCTTGGCCTGGTCCCCCAAGCGAGACCTCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031072.14 ENSMUST00000144574.8 |
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| CDS-3UTR CAA 90 bp | GCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACGCAATGAGGTCTCGCTaGGGGGACCAGGCCAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: ASLVYRASPRTSKATQRNAMRSR*GDQAKK Trigger: TTTCTTGGCCTGGTCCCCCAAGCGAGACCTCATTGC...GTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS-3UTR CAA 90 bp | GTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGGACAACACTTCCTCCTaGATCTTCACAGGCTTCCCG | + |
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Preference number: 5 (lower is better) Translates to: VWSTELVPGHPRLHRETQDNTSS*IFTGFP Trigger: CGGGAAGCCTGTGAAGATCAAGGAGGAAGTGTTGTC...CTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS-3UTR CAA 90 bp | CCCCACAGCAGCAAGTGCATGAACTCATCCTGCACTGACGTGGTTGTAGGTTTTACCTCGCCTGTAGTGTaGGCCAAAGCAATGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: PHSSKCMNSSCTDVVVGFTSPVV*AKAMRS Trigger: AGACCTCATTGCTTTGGCCAACACTACAGGCGAGGT...AAAACCTACAACCACGTCAGTGCAGGATGAGTTCATGCACTTGCTGCTGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| CDS-3UTR CAA 90 bp | AATCTCTGTGAGTCTGAAGCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCCAGGTGGGTGCTGTTTaGGAGGAAGTCATACCACTG | + |
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Preference number: 5 (lower is better) Translates to: NLCESEASLVYRASPRTSQVGAV*EEVIPL Trigger: CAGTGGTATGACTTCCTCCAAAACAGCACCCACCTG...GGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGCTTCAGACTCACAGAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS GCA 90 bp | TACAGTAAAGACTCAGAGCCACTGGCTTTCCCCCACAGCAGCAAGTaGATGAACTCATCCTGCACTGACGTGGTTGTAGGTTTTTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: YSKDSEPLAFPHSSK*MNSSCTDVVVGFSC Trigger: ACAGGAAAAACCTACAACCACGTCAGTGCAGGATGAGTTCATGCACTTGCTGCTGTGGGGGAAAGCCAGTGGCTCTGAGTCTTTACTGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000150682.3 |
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| CDS-3UTR CAA 90 bp | TCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGTCTGGAAGGTCTGGAGCCTCATaGAAATGTTCAGTGAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: STELVPGHPRLHRETQSGRSGAS*KCSVRN Trigger: ATTCCTCACTGAACATTTCAATGAGGCTCCAGACCT...TCCAGACTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS GCA 90 bp | TCCTGTACTTTCATTTGGTGGGAAACTCCAAACTCGATGAAAACTTaGAAGGCGATGCAGCAAAACCTCGCCTGTAGTGTTGGCCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: SCTFIWWETPNSMKT*KAMQQNLACSVGQS Trigger: GCTTTGGCCAACACTACAGGCGAGGTTTTGCTGCATCGCCTTGCAAGTTTTCATCGAGTTTGGAGTTTCCCACCAAATGAAAGTACAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031072.14 ENSMUST00000144574.8 |
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| CDS CCA 90 bp | TGGTCTCCAGGCCAAGCAGGTCACTTCTTTTCCTGTACTTTCATTTaGTGGGAAACTCCAAACTCGATGAAAACTTGCAAGGCGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: WSPGQAGHFFSCTFI*WETPNSMKTCKAMQ Trigger: CTGCATCGCCTTGCAAGTTTTCATCGAGTTTGGAGTTTCCCACCAAATGAAAGTACAGGAAAAGAAGTGACCTGCTTGGCCTGGAGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031072.14 ENSMUST00000144574.8 |
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| CDS-3UTR CAA 90 bp | GCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACAAACTCGATGAAAACTaGCAAGGCGATGCAGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: ASLVYRASPRTSKATQRNKLDEN*QGDAAK Trigger: TTTTGCTGCATCGCCTTGCAAGTTTTCATCGAGTTT...GTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS-3UTR CAA 90 bp | GCAAGTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACTTAGGCAAGAGAAGATaGGACTCATCCTCAGCATTA | + |
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Preference number: 5 (lower is better) Translates to: ASLVYRASPRTSKATQRNLGKRR*DSSSAL Trigger: TAATGCTGAGGATGAGTCCAATCTTCTCTTGCCTAA...GTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGACTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS-3UTR CAA 90 bp | GTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGTACATCTGCTGGCTTTaGCAAACACTGATCAATAAC | + |
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Preference number: 5 (lower is better) Translates to: VWSTELVPGHPRLHRETQYICWL*QTLINN Trigger: GTTATTGATCAGTGTTTGCAAAAGCCAGCAGATGTA...CTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS-3UTR CAA 90 bp | GTCTGGTCTACAGAGCTAGTCCCAGGACATCCAAGGCTACACAGAGAAACCCAGTGGAATGCAAATTGCTaGATTCATCGATCTTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: VWSTELVPGHPRLHRETQWNANC*IHRSSN Trigger: ATTGGAAGATCGATGAATCAAGCAATTTGCATTCCA...CTGGGTTTCTCTGTGTAGCCTTGGATGTCCTGGGACTAGCTCTGTAGACCAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS-3UTR CAA 90 bp | ATTATAAAGGTCTGGAGCCTCATTGAAATGTTCAGTGAGGAATTCAGCAACAAAGCAATGAGGTCTCGCTaGGGGGACCAGGCCAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: IIKVWSLIEMFSEEFSNKAMRSR*GDQAKK Trigger: TTTCTTGGCCTGGTCCCCCAAGCGAGACCTCATTGC...TTTGTTGCTGAATTCCTCACTGAACATTTCAATGAGGCTCCAGACCTTTATAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144574.8 |
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| CDS TCA 90 bp | ACTTCTTTTCCTGTACTTTCATTTGGTGGGAAACTCCAAACTCGATaGAAACTTGCAAGGCGATGCAGCAAAACCTCGCCTGTAGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: TSFPVLSFGGKLQTR*KLARRCSKTSPVVL Trigger: CAACACTACAGGCGAGGTTTTGCTGCATCGCCTTGCAAGTTTTCATCGAGTTTGGAGTTTCCCACCAAATGAAAGTACAGGAAAAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031072.14 ENSMUST00000144574.8 |
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| CDS-3UTR CAA 90 bp | TTCCTGGACTACATATTCCTCGTGAGGTCATTTCTGATTTTATACCTTCTTTGCACCTCGCCTGTAGTGTaGGCCAAAGCAATGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: FLDYIFLVRSFLILYLLCTSPVV*AKAMRS Trigger: AGACCTCATTGCTTTGGCCAACACTACAGGCGAGGT...GCAAAGAAGGTATAAAATCAGAAATGACCTCACGAGGAATATGTAGTCCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS-3UTR CAA 90 bp | TTCCTGGACTACATATTCCTCGTGAGGTCATTTCTGATTTTATACCTTCTTTGCGAGCTTCTTCTGACCTaGTCAGCTGAGGCAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: FLDYIFLVRSFLILYLLCELLLT*SAEADV Trigger: CACATCTGCCTCAGCTGACAAGGTCAGAAGAAGCTC...GCAAAGAAGGTATAAAATCAGAAATGACCTCACGAGGAATATGTAGTCCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS-3UTR CAA 90 bp | CCATTTATTTCTTTGATACACAGACAACTCAGTGTGACCGATACATTCTTAGTCCACAAAATAATTTTCTaGGTATCCGCAAGAGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: PFISLIHRQLSVTDTFLVHKIIF*VSARAK Trigger: CTTTGCTCTTGCGGATACCAAGAAAATTATTTTGTG...GACTAAGAATGTATCGGTCACACTGAGTTGTCTGTGTATCAAAGAAATAAATGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS CAA 72 bp | CTTGCAAGGCGATGCAGCAAAACCTCGCCTGTAGTGTaGGCCAAAGCAATGAGGTCTCGCTTGGGGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: LARRCSKTSPVV*AKAMRSRLGDQ Trigger: CTGGTCCCCCAAGCGAGACCTCATTGCTTTGGCCAACACTACAGGCGAGGTTTTGCTGCATCGCCTTGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031072.14 ENSMUST00000144574.8 |
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| CDS GCA 72 bp | GACTCAGAGCCACTGGCTTTCCCCCACAGCAGCAAGTaGATGAACTCATCCTGCACTGACGTGGTTGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: DSEPLAFPHSSK*MNSSCTDVVVG Trigger: ACCTACAACCACGTCAGTGCAGGATGAGTTCATGCACTTGCTGCTGTGGGGGAAAGCCAGTGGCTCTGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150682.3 |
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| CDS CAA 72 bp | TCGCCTGTAGTGTTGGCCAAAGCAATGAGGTCTCGCTaGGGGGACCAGGCCAAGAAAATAATCTCCTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SPVVLAKAMRSR*GDQAKKIISCG Trigger: GCCACAGGAGATTATTTTCTTGGCCTGGTCCCCCAAGCGAGACCTCATTGCTTTGGCCAACACTACAGGCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031072.14 ENSMUST00000144574.8 |
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| CDS CCA 72 bp | GGTATCCGCAAGAGCAAAGGCCAAAAGTTTGCCGTCTaGTCTCCAGGCCAAGCAGGTCACTTCTTTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GIRKSKGQKFAV*SPGQAGHFFSC Trigger: ACAGGAAAAGAAGTGACCTGCTTGGCCTGGAGACCAGACGGCAAACTTTTGGCCTTTGCTCTTGCGGATACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS CAA 72 bp | ATTTTCTTGGTATCCGCAAGAGCAAAGGCCAAAAGTTaGCCGTCTGGTCTCCAGGCCAAGCAGGTCACTTCT | + |
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Preference number: 6 (lower is better) Translates to: IFLVSARAKAKS*PSGLQAKQVTS Trigger: AGAAGTGACCTGCTTGGCCTGGAGACCAGACGGCAAACTTTTGGCCTTTGCTCTTGCGGATACCAAGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031072.14 |
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| CDS TCA 72 bp | CCTGTACTTTCATTTGGTGGGAAACTCCAAACTCGATaGAAACTTGCAAGGCGATGCAGCAAAACCTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: PVLSFGGKLQTR*KLARRCSKTSP Trigger: AGGCGAGGTTTTGCTGCATCGCCTTGCAAGTTTTCATCGAGTTTGGAGTTTCCCACCAAATGAAAGTACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031072.14 ENSMUST00000144574.8 |
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| CDS GCA 72 bp | TTCATTTGGTGGGAAACTCCAAACTCGATGAAAACTTaGAAGGCGATGCAGCAAAACCTCGCCTGTAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: FIWWETPNSMKT*KAMQQNLACSV Trigger: AACACTACAGGCGAGGTTTTGCTGCATCGCCTTGCAAGTTTTCATCGAGTTTGGAGTTTCCCACCAAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031072.14 ENSMUST00000144574.8 |
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