Pregenerated sensors for ANAPC16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020107Ensembl transcript IDs: ENSMUST00000020307.11, ENSMUST00000182116.8, ENSMUST00000182152.2, ENSMUST00000182898.8, ENSMUST00000182912.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAAGTATGGATGTGGATTCAGACATGCAGCTCACAGGACAGCTGTaGCTCCCTGGGTGGCTGTGCCCTAAGGGTGGTCGTGCAGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: PSMDVDSDMQLTGQL*LPGWLCPKGGRAGN Trigger: GTTGCCTGCACGACCACCCTTAGGGCACAGCCACCCAGGGAGTCACAGCTGTCCTGTGAGCTGCATGTCTGAATCCACATCCATACTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020307.11 ENSMUST00000182116.8 ENSMUST00000182152.2 ENSMUST00000182898.8 ENSMUST00000182912.2 |
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| 3UTR CCA 90 bp | ACGGACCCTGAGCTGAAACCACATTCATGTGTGAAGAGAAATGTTTaGGCTGTGACCGTGAAACGACAGATGCTGACCTTGGGCTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: TDPELKPHSCVKRNV*AVTVKRQMLTLGLA Trigger: AGCCAAGCCCAAGGTCAGCATCTGTCGTTTCACGGTCACAGCCCAAACATTTCTCTTCACACATGAATGTGGTTTCAGCTCAGGGTCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR TCA 90 bp | TCCTCCATTCAGTTGGCTGACTCTGGCATGTGTCCATTTGGCTTGTaGGAATCAGTGTTTCCTAGATCCCAAGCCTCCTGGTTCTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: SSIQLADSGMCPFGL*ESVFPRSQASWFSE Trigger: TTCAGAGAACCAGGAGGCTTGGGATCTAGGAAACACTGATTCTCACAAGCCAAATGGACACATGCCAGAGTCAGCCAACTGAATGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR TCA 90 bp | ACAGAGAGGGAAAGGACACTTTACAGCTCCCATCTGGACGGACCCTaGGCTGAAACCACATTCATGTGTGAAGAGAAATGTTTGGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: TERERTLYSSHLDGP*AETTFMCEEKCLGC Trigger: ACAGCCCAAACATTTCTCTTCACACATGAATGTGGTTTCAGCTCAGGGTCCGTCCAGATGGGAGCTGTAAAGTGTCCTTTCCCTCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR TCA 90 bp | TATGTAAAAGTACTTAAGCCTCCTAATTGTGCAGTGTGGGTCCCATaGCGAGGGCTTGGTCATCCAGGTTTTTCTCTATCTTCGTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: YVKVLKPPNCAVWVP*RGLGHPGFSLSSCK Trigger: TTTACACGAAGATAGAGAAAAACCTGGATGACCAAGCCCTCGTCATGGGACCCACACTGCACAATTAGGAGGCTTAAGTACTTTTACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182898.8 |
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| 3UTR GCA 90 bp | ATGAATGTGAAAAACATCTCCGCGACATCTCACATGAGCACTTGTTaGCTATTAGCAGAATTGGAGACACCAAGTATGGATGTGGATTCA | + |
|
Preference number: 1 (lower is better) Translates to: MNVKNISATSHMSTC*LLAELETPSMDVDS Trigger: TGAATCCACATCCATACTTGGTGTCTCCAATTCTGCTAATAGGCAACAAGTGCTCATGTGAGATGTCGCGGAGATGTTTTTCACATTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020307.11 ENSMUST00000182116.8 ENSMUST00000182898.8 ENSMUST00000182912.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAATGTTTGGGCTGTGACCGTGAAACGACAGATGCTGACCTTGGGCTTGGCAGCCTCCTGGTTCTCTaGAAGGACTGTCTCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: EKCLGCDRETTDADLGLGSLLVL*KDCLHL Trigger: CAGATGGAGACAGTCCTTTCAGAGAACCAGGAGGCT...GCCAAGCCCAAGGTCAGCATCTGTCGTTTCACGGTCACAGCCCAAACATTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTCCAGACAGCCTCTGAATGACAGGACATCCTCCATTCAGTTGGCTGACTCTAGATCCTCCTGCCTCTaGTTCCCAAGTGCTGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: ASRQPLNDRTSSIQLADSRSSCL*FPSAAQ Trigger: TTGGGCAGCACTTGGGAAGCAGAGGCAGGAGGATCT...AGAGTCAGCCAACTGAATGGAGGATGTCCTGTCATTCAGAGGCTGTCTGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR CAA 90 bp | ACAGGACATCCTCCATTCAGTTGGCTGACTCTGGCATGTGTCCATTaGGCTTGTGAGAATCAGTGTTTCCTAGATCCCAAGCCTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TGHPPFSWLTLACVH*ACENQCFLDPKPPG Trigger: ACCAGGAGGCTTGGGATCTAGGAAACACTGATTCTCACAAGCCAAATGGACACATGCCAGAGTCAGCCAACTGAATGGAGGATGTCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGAATGACAGGACATCCTCCATTCAGTTGGCTGACTCTGGCATGTGTCCAATGTGGATTCAGACATaGAGCTCACAGGACAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PLNDRTSSIQLADSGMCPMWIQT*SSQDSC Trigger: ACAGCTGTCCTGTGAGCTGCATGTCTGAATCCACAT...TGGACACATGCCAGAGTCAGCCAACTGAATGGAGGATGTCCTGTCATTCAGAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAATGTTTGGGCTGTGACCGTGAAACGACAGATGCTGACCTTGGGCTTGGCTGGAGACACCAAGTATaGATGTGGATTCAGACATGC | + |
|
Preference number: 2 (lower is better) Translates to: EKCLGCDRETTDADLGLGWRHQV*MWIQTC Trigger: GCATGTCTGAATCCACATCCATACTTGGTGTCTCCA...GCCAAGCCCAAGGTCAGCATCTGTCGTTTCACGGTCACAGCCCAAACATTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR-3UTR GCA 90 bp | GTGACCGTGAAACGACAGATGCTGACCTTGGGCTTGGCTGGTGAAAGCTTCCAGCCAAGTGCTGCCCAATaGTTTAAAGAACATGAATGT | + |
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Preference number: 2 (lower is better) Translates to: VTVKRQMLTLGLAGESFQPSAAQ*FKEHEC Trigger: ACATTCATGTTCTTTAAAGCATTGGGCAGCACTTGG...CTGGAAGCTTTCACCAGCCAAGCCCAAGGTCAGCATCTGTCGTTTCACGGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR-3UTR CCA 90 bp | CAAACAAGCGAACTAACCAACAAACAGCCCACGGCCACACTCACTGAGGTTGCAGTGAAGAGAAATGTTTaGGCTGTGACCGTGAAACGA | + |
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Preference number: 2 (lower is better) Translates to: QTSELTNKQPTATLTEVAVKRNV*AVTVKR Trigger: TCGTTTCACGGTCACAGCCCAAACATTTCTCTTCAC...TGCAACCTCAGTGAGTGTGGCCGTGGGCTGTTTGTTGGTTAGTTCGCTTGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182898.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGAATGACAGGACATCCTCCATTCAGTTGGCTGACTCTGGCATGTGTCCAAGGACTGTCTCCATCTaGTCCCCAATACTTCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: PLNDRTSSIQLADSGMCPRTVSI*SPILLF Trigger: AAAAAGAAGTATTGGGGATCAGATGGAGACAGTCCT...TGGACACATGCCAGAGTCAGCCAACTGAATGGAGGATGTCCTGTCATTCAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR-3UTR TCA 90 bp | CAAACAAGCGAACTAACCAACAAACAGCCCACGGCCACACTCACTGAGGTTGCAAACCACATTCATGTGTaGAGAGAAATGTTTGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QTSELTNKQPTATLTEVANHIHV*REMFGL Trigger: CAGCCCAAACATTTCTCTTCACACATGAATGTGGTT...TGCAACCTCAGTGAGTGTGGCCGTGGGCTGTTTGTTGGTTAGTTCGCTTGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182898.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTGTGAGAATCAGTGTTTCCTAGATCCCAAGCCTCCTGGTTCTCTGAAAGGAATGTGGATTCAGACATaGAGCTCACAGGACAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ACENQCFLDPKPPGSLKGMWIQT*SSQDSC Trigger: ACAGCTGTCCTGTGAGCTGCATGTCTGAATCCACAT...TCCTTTCAGAGAACCAGGAGGCTTGGGATCTAGGAAACACTGATTCTCACAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTGCCTCTGCTTCCCAAGTGCTGCCCAATGCTTTAAAGAACATGAATGTGCACCAAGTATGGATGTaGATTCAGACATGCAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PPASASQVLPNALKNMNVHQVWM*IQTCSS Trigger: TGAGCTGCATGTCTGAATCCACATCCATACTTGGTG...CACATTCATGTTCTTTAAAGCATTGGGCAGCACTTGGGAAGCAGAGGCAGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020307.11 ENSMUST00000182116.8 ENSMUST00000182898.8 ENSMUST00000182912.2 |
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| 3UTR CAA 90 bp | ATCTCCGCGACATCTCACATGAGCACTTGTTGCCTATTAGCAGAATaGGAGACACCAAGTATGGATGTGGATTCAGACATGCAGCTCACA | + |
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Preference number: 2 (lower is better) Translates to: ISATSHMSTCCLLAE*ETPSMDVDSDMQLT Trigger: TGTGAGCTGCATGTCTGAATCCACATCCATACTTGGTGTCTCCAATTCTGCTAATAGGCAACAAGTGCTCATGTGAGATGTCGCGGAGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020307.11 ENSMUST00000182116.8 ENSMUST00000182898.8 ENSMUST00000182912.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGGACATCCTCCATTCAGTTGGCTGACTCTGGCATGTGTCCATTTGGCTTGTCACATGAGCACTTGTTaGCTATTAGCAGAATTGGAG | + |
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Preference number: 2 (lower is better) Translates to: TGHPPFSWLTLACVHLACHMSTC*LLAELE Trigger: CTCCAATTCTGCTAATAGGCAACAAGTGCTCATGTG...ACAAGCCAAATGGACACATGCCAGAGTCAGCCAACTGAATGGAGGATGTCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTGCCTCTGCTTCCCAAGTGCTGCCCAATGCTTTAAAGAACATGAATGTGCACATGAGCACTTGTTaGCTATTAGCAGAATTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: PPASASQVLPNALKNMNVHMSTC*LLAELE Trigger: CTCCAATTCTGCTAATAGGCAACAAGTGCTCATGTG...CACATTCATGTTCTTTAAAGCATTGGGCAGCACTTGGGAAGCAGAGGCAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020307.11 ENSMUST00000182116.8 ENSMUST00000182898.8 ENSMUST00000182912.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGTGAAGAGAAATGTTTGGGCTGTGACCGTGAAACGACAGATGCTGACCTTTGTCCATTTGGCTTGTaGGAATCAGTGTTTCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: MCEEKCLGCDRETTDADLCPFGL*ESVFPR Trigger: TCTAGGAAACACTGATTCTCACAAGCCAAATGGACA...AAGGTCAGCATCTGTCGTTTCACGGTCACAGCCCAAACATTTCTCTTCACACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR TCA 72 bp | GATGTGGATTCAGACATGCAGCTCACAGGACAGCTGTaGCTCCCTGGGTGGCTGTGCCCTAAGGGTGGTCGT | + |
|
Preference number: 3 (lower is better) Translates to: DVDSDMQLTGQL*LPGWLCPKGGR Trigger: ACGACCACCCTTAGGGCACAGCCACCCAGGGAGTCACAGCTGTCCTGTGAGCTGCATGTCTGAATCCACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020307.11 ENSMUST00000182116.8 ENSMUST00000182152.2 ENSMUST00000182898.8 ENSMUST00000182912.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAAATGTTTGGGCTGTGACCGTGAAACGACAGATGCTGACCTTGGGCTTGGCCTGGCATGTGTCCATTaGGCTTGTGAGAATCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: EKCLGCDRETTDADLGLGLACVH*ACENQC Trigger: ACACTGATTCTCACAAGCCAAATGGACACATGCCAG...GCCAAGCCCAAGGTCAGCATCTGTCGTTTCACGGTCACAGCCCAAACATTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR TCA 72 bp | GTACTTAAGCCTCCTAATTGTGCAGTGTGGGTCCCATaGCGAGGGCTTGGTCATCCAGGTTTTTCTCTATCT | + |
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Preference number: 3 (lower is better) Translates to: VLKPPNCAVWVP*RGLGHPGFSLS Trigger: AGATAGAGAAAAACCTGGATGACCAAGCCCTCGTCATGGGACCCACACTGCACAATTAGGAGGCTTAAGTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182898.8 |
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| 3UTR TCA 72 bp | GAAAGGACACTTTACAGCTCCCATCTGGACGGACCCTaGGCTGAAACCACATTCATGTGTGAAGAGAAATGT | + |
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Preference number: 3 (lower is better) Translates to: ERTLYSSHLDGP*AETTFMCEEKC Trigger: ACATTTCTCTTCACACATGAATGTGGTTTCAGCTCAGGGTCCGTCCAGATGGGAGCTGTAAAGTGTCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR TCA 72 bp | CGAACTAACCAACAAACAGCCCACGGCCACACTCACTaGGGTTGCAGTAAGTTGGAACTTCTATACAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: RTNQQTAHGHTH*GCSKLELLYKQ Trigger: TTGCTTGTATAGAAGTTCCAACTTACTGCAACCTCAGTGAGTGTGGCCGTGGGCTGTTTGTTGGTTAGTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182898.8 |
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| 3UTR TCA 72 bp | GGCAGAGTGAGGTGGAGTAGCACATTTGGCATGTCGTaGGAGGTGAAAGAAATAGTCTGTAATGTTAAATGT | + |
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Preference number: 3 (lower is better) Translates to: GRVRWSSTFGMS*EVKEIVCNVKC Trigger: ACATTTAACATTACAGACTATTTCTTTCACCTCTCACGACATGCCAAATGTGCTACTCCACCTCACTCTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| 3UTR GCA 72 bp | AAAAACATCTCCGCGACATCTCACATGAGCACTTGTTaGCTATTAGCAGAATTGGAGACACCAAGTATGGAT | + |
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Preference number: 3 (lower is better) Translates to: KNISATSHMSTC*LLAELETPSMD Trigger: ATCCATACTTGGTGTCTCCAATTCTGCTAATAGGCAACAAGTGCTCATGTGAGATGTCGCGGAGATGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020307.11 ENSMUST00000182116.8 ENSMUST00000182898.8 ENSMUST00000182912.2 |
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| CDS-3UTR TCA 90 bp | ATTCAGACATGCAGCTCACAGGACAGCTGTGACTCCCTGGGTGGCTGTGCCCTAACTGACCCCACCAGCTaGAGACGAAGACGAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: IQTCSSQDSCDSLGGCALTDPTS*RRRRGG Trigger: GCCTCCTCGTCTTCGTCTTCAGCTGGTGGGGTCAGT...TAGGGCACAGCCACCCAGGGAGTCACAGCTGTCCTGTGAGCTGCATGTCTGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS-3UTR TCA 90 bp | CAAACAAGCGAACTAACCAACAAACAGCCCACGGCCACACTCACTGAGGTTGCAACTGACCCCACCAGCTaGAGACGAAGACGAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QTSELTNKQPTATLTEVATDPTS*RRRRGG Trigger: GCCTCCTCGTCTTCGTCTTCAGCTGGTGGGGTCAGT...TGCAACCTCAGTGAGTGTGGCCGTGGGCTGTTTGTTGGTTAGTTCGCTTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182898.8 |
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| 3UTR CAA 72 bp | GTTTGGGCTGTGACCGTGAAACGACAGATGCTGACCTaGGGCTTGGCTGGTGAAAGCTTCCAGACAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VWAVTVKRQMLT*GLAGESFQTAS Trigger: AGAGGCTGTCTGGAAGCTTTCACCAGCCAAGCCCAAGGTCAGCATCTGTCGTTTCACGGTCACAGCCCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| CDS-3UTR TCA 90 bp | ATTGGAGACACCAAGTATGGATGTGGATTCAGACATGCAGCTCACAGGACAGCTACTGACCCCACCAGCTaGAGACGAAGACGAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: IGDTKYGCGFRHAAHRTATDPTS*RRRRGG Trigger: GCCTCCTCGTCTTCGTCTTCAGCTGGTGGGGTCAGT...AGCTGTCCTGTGAGCTGCATGTCTGAATCCACATCCATACTTGGTGTCTCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS-3UTR GCA 90 bp | CCTCTGAATGACAGGACATCCTCCATTCAGTTGGCTGACTCTGGCATGTGTCCACTGTTTAAGCGTGGATaGCACTTGATAGCTAAACAC | + |
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Preference number: 4 (lower is better) Translates to: PLNDRTSSIQLADSGMCPLFKRG*HLIAKH Trigger: GTGTTTAGCTATCAAGTGGCATCCACGCTTAAACAG...TGGACACATGCCAGAGTCAGCCAACTGAATGGAGGATGTCCTGTCATTCAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| CDS-3UTR GCA 90 bp | CACCAAGTATGGATGTGGATTCAGACATGCAGCTCACAGGACAGCTGTGACTCCCTGTTTAAGCGTGGATaGCACTTGATAGCTAAACAC | + |
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Preference number: 4 (lower is better) Translates to: HQVWMWIQTCSSQDSCDSLFKRG*HLIAKH Trigger: GTGTTTAGCTATCAAGTGGCATCCACGCTTAAACAG...GGAGTCACAGCTGTCCTGTGAGCTGCATGTCTGAATCCACATCCATACTTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS-3UTR GCA 90 bp | GGAGACACCAAGTATGGATGTGGATTCAGACATGCAGCTCACAGGACAGCTGTGCTGTTTAAGCGTGGATaGCACTTGATAGCTAAACAC | + |
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Preference number: 4 (lower is better) Translates to: GDTKYGCGFRHAAHRTAVLFKRG*HLIAKH Trigger: GTGTTTAGCTATCAAGTGGCATCCACGCTTAAACAG...CACAGCTGTCCTGTGAGCTGCATGTCTGAATCCACATCCATACTTGGTGTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| 3UTR CAA 72 bp | CTCCTAATTGTGCAGTGTGGGTCCCATGACGAGGGCTaGGTCATCCAGGTTTTTCTCTATCTTCGTGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: LLIVQCGSHDEG*VIQVFLYLRVK Trigger: TTTTACACGAAGATAGAGAAAAACCTGGATGACCAAGCCCTCGTCATGGGACCCACACTGCACAATTAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182898.8 |
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| CDS-3UTR CAA 90 bp | GGATTCAGACATGCAGCTCACAGGACAGCTGTGACTCCCTGGGTGGCTGTGCCCTTCCATCCGAGCGACTaGCTGATCATGCTTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: GFRHAAHRTAVTPWVAVPFHPSD*LIMLHL Trigger: CAGGTGAAGCATGATCAGCAAGTCGCTCGGATGGAA...GGGCACAGCCACCCAGGGAGTCACAGCTGTCCTGTGAGCTGCATGTCTGAATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS CCA 90 bp | CATCTCTCCAGCTCCTTTCGGGTAGGTGAACAGAGCTTTCCGAGGTaGGGCAAGGTCGGACACACTGAAACCAGATCCGGTGACAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: HLSSSFRVGEQSFPR*GKVGHTETRSGDRA Trigger: AGCTCTGTCACCGGATCTGGTTTCAGTGTGTCCGACCTTGCCCCACCTCGGAAAGCTCTGTTCACCTACCCGAAAGGAGCTGGAGAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS-3UTR CAA 90 bp | ATTCAGACATGCAGCTCACAGGACAGCTGTGACTCCCTGGGTGGCTGTGCCCTAAAGCGTGGATGCCACTaGATAGCTAAACACCGACTC | + |
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Preference number: 5 (lower is better) Translates to: IQTCSSQDSCDSLGGCALKRGCH*IAKHRL Trigger: GAGTCGGTGTTTAGCTATCAAGTGGCATCCACGCTT...TAGGGCACAGCCACCCAGGGAGTCACAGCTGTCCTGTGAGCTGCATGTCTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS-3UTR CAA 90 bp | ATGTGGATTCAGACATGCAGCTCACAGGACAGCTGTGACTCCCTGGGTGGCTGTAAGCGTGGATGCCACTaGATAGCTAAACACCGACTC | + |
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Preference number: 5 (lower is better) Translates to: MWIQTCSSQDSCDSLGGCKRGCH*IAKHRL Trigger: GAGTCGGTGTTTAGCTATCAAGTGGCATCCACGCTT...ACAGCCACCCAGGGAGTCACAGCTGTCCTGTGAGCTGCATGTCTGAATCCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS GCA 90 bp | CATCCGAGCGACTTGCTGATCATGCTTCACCTGTTTAAGCGTGGATaGCACTTGATAGCTAAACACCGACTCACAGAGGAATCGCTCGGA | + |
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Preference number: 5 (lower is better) Translates to: HPSDLLIMLHLFKRG*HLIAKHRLTEESLG Trigger: TCCGAGCGATTCCTCTGTGAGTCGGTGTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAGCATGATCAGCAAGTCGCTCGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS-3UTR CAA 90 bp | GCTTGTGAGAATCAGTGTTTCCTAGATCCCAAGCCTCCTGGTTCTCTGAAAGGATTCCATCCGAGCGACTaGCTGATCATGCTTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: ACENQCFLDPKPPGSLKGFHPSD*LIMLHL Trigger: CAGGTGAAGCATGATCAGCAAGTCGCTCGGATGGAA...TCCTTTCAGAGAACCAGGAGGCTTGGGATCTAGGAAACACTGATTCTCACAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020307.11 ENSMUST00000182898.8 |
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| CDS-3UTR CAA 90 bp | AGAATTGGAGACACCAAGTATGGATGTGGATTCAGACATGCAGCTCACAGGACAAAGCGTGGATGCCACTaGATAGCTAAACACCGACTC | + |
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Preference number: 5 (lower is better) Translates to: RIGDTKYGCGFRHAAHRTKRGCH*IAKHRL Trigger: GAGTCGGTGTTTAGCTATCAAGTGGCATCCACGCTT...TGTCCTGTGAGCTGCATGTCTGAATCCACATCCATACTTGGTGTCTCCAATTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS CCA 72 bp | AGCTCCTTTCGGGTAGGTGAACAGAGCTTTCCGAGGTaGGGCAAGGTCGGACACACTGAAACCAGATCCGGT | + |
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Preference number: 6 (lower is better) Translates to: SSFRVGEQSFPR*GKVGHTETRSG Trigger: ACCGGATCTGGTTTCAGTGTGTCCGACCTTGCCCCACCTCGGAAAGCTCTGTTCACCTACCCGAAAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS TCA 72 bp | CATCTTCTAACATCTCTCCAGCTCCTTTCGGGTAGGTaGACAGAGCTTTCCGAGGTGGGGCAAGGTCGGACA | + |
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Preference number: 6 (lower is better) Translates to: HLLTSLQLLSGR*TELSEVGQGRT Trigger: TGTCCGACCTTGCCCCACCTCGGAAAGCTCTGTTCACCTACCCGAAAGGAGCTGGAGAGATGTTAGAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS CAA 90 bp | AGCGACTTGCTGATCATGCTTCACCTGTTTAAGCGTGGATGCCACTaGATAGCTAAACACCGACTCACAGAGGAATCGCTCGGAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: SDLLIMLHLFKRGCH*IAKHRLTEESLGAI Trigger: GATGGCTCCGAGCGATTCCTCTGTGAGTCGGTGTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAGCATGATCAGCAAGTCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS CAA 72 bp | CTGATCATGCTTCACCTGTTTAAGCGTGGATGCCACTaGATAGCTAAACACCGACTCACAGAGGAATCGCTC | + |
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Preference number: 6 (lower is better) Translates to: LIMLHLFKRGCH*IAKHRLTEESL Trigger: GAGCGATTCCTCTGTGAGTCGGTGTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAGCATGATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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| CDS GCA 72 bp | GACTTGCTGATCATGCTTCACCTGTTTAAGCGTGGATaGCACTTGATAGCTAAACACCGACTCACAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: DLLIMLHLFKRG*HLIAKHRLTEE Trigger: TTCCTCTGTGAGTCGGTGTTTAGCTATCAAGTGGCATCCACGCTTAAACAGGTGAAGCATGATCAGCAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020307.11 ENSMUST00000182152.2 ENSMUST00000182898.8 |
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