Pregenerated sensors for ANAPC15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030649Ensembl transcript IDs: ENSMUST00000035395.14, ENSMUST00000098237.9, ENSMUST00000106973.8, ENSMUST00000106978.8, ENSMUST00000144207.9, ENSMUST00000178851.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACCCCGCTTCCTACAGTACACCAAGAGCTGTGGTCGCTATCGCTaGCGCCTTCACCACACCAGCCTCCCAGACTTCCCTGCCATTAAA | + |
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Preference number: 1 (lower is better) Translates to: APRFLQYTKSCGRYR*RLHHTSLPDFPAIK Trigger: TTTAATGGCAGGGAAGTCTGGGAGGCTGGTGTGGTGAAGGCGGCAGCGATAGCGACCACAGCTCTTGGTGTACTGTAGGAAGCGGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR CCA 90 bp | GAAGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATaGCCTGGAAGGGCCCAAGGAGACCTTGTCCTGGCAGTAGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: EGGMGSGSWDSREDS*PGRAQGDLVLAVAE Trigger: CTCAGCTACTGCCAGGACAAGGTCTCCTTGGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR CCA 90 bp | GCTTTTTCCTGGTGCACCCCGCTTCCTACAGTACACCAAGAGCTGTaGTCGCTATCGCTGCCGCCTTCACCACACCAGCCTCCCAGACTT | + |
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Preference number: 1 (lower is better) Translates to: AFSWCTPLPTVHQEL*SLSLPPSPHQPPRL Trigger: AAGTCTGGGAGGCTGGTGTGGTGAAGGCGGCAGCGATAGCGACCACAGCTCTTGGTGTACTGTAGGAAGCGGGGTGCACCAGGAAAAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR TCA 90 bp | ACTGGAGGCCCATGCTCTGCTCCCACATGGCGCCACTGTATTGGCTaGCCATGTGCTTTTTCCTGGTGCACCCCGCTTCCTACAGTACAC | + |
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Preference number: 1 (lower is better) Translates to: TGGPCSAPTWRHCIG*PCAFSWCTPLPTVH Trigger: GTGTACTGTAGGAAGCGGGGTGCACCAGGAAAAAGCACATGGTCAGCCAATACAGTGGCGCCATGTGGGAGCAGAGCATGGGCCTCCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR GCA 90 bp | AAGGAAGCAGCTCCACTCAGGCAGCTGGCATCCTGGAGGGCATGCTaGTCCTACCCACAATCCCGAGTCTTTTGCACTTACTTCCTGCGG | + |
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Preference number: 1 (lower is better) Translates to: KEAAPLRQLASWRAC*SYPQSRVFCTYFLR Trigger: CCGCAGGAAGTAAGTGCAAAAGACTCGGGATTGTGGGTAGGAGCAGCATGCCCTCCAGGATGCCAGCTGCCTGAGTGGAGCTGCTTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR CCA 90 bp | TGCTTATTGCGCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCACTGTaGAGCGGGACTCACGTACAGCAGCAGTGGCTGAAAAAGTCATCC | + |
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Preference number: 1 (lower is better) Translates to: CLLREPCPLEVAFSL*SGTHVQQQWLKKSS Trigger: GGATGACTTTTTCAGCCACTGCTGCTGTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR CCA 90 bp | GGAAGAGAAGGCCCCTGCTTGTGTGCTGGAGCTGGGCACATACTGTaGATACTCTACACTGCTTATTGCGCGAGCCTTGCCCCCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: GREGPCLCAGAGHIL*ILYTAYCASLAPWK Trigger: CTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAGTATCCACAGTATGTGCCCAGCTCCAGCACACAAGCAGGGGCCTTCTCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR CCA 90 bp | TTCATGAGGGACTCCCATTCAAGGAAGCAGCTCCACTCAGGCAGCTaGCATCCTGGAGGGCATGCTGCTCCTACCCACAATCCCGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: FMRDSHSRKQLHSGS*HPGGHAAPTHNPES Trigger: AGACTCGGGATTGTGGGTAGGAGCAGCATGCCCTCCAGGATGCCAGCTGCCTGAGTGGAGCTGCTTCCTTGAATGGGAGTCCCTCATGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR GCA 90 bp | TGGGCACATACTGTGGATACTCTACACTGCTTATTGCGCGAGCCTTaGCCCCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTA | + |
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Preference number: 1 (lower is better) Translates to: WAHTVDTLHCLLREP*PLEVAFSLWSGTHV Trigger: TACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAGTATCCACAGTATGTGCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR GCA 90 bp | CCCATGCTCTGCTCCCACATGGCGCCACTGTATTGGCTGACCATGTaGTTTTTCCTGGTGCACCCCGCTTCCTACAGTACACCAAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: PMLCSHMAPLYWLTM*FFLVHPASYSTPRA Trigger: AGCTCTTGGTGTACTGTAGGAAGCGGGGTGCACCAGGAAAAAGCACATGGTCAGCCAATACAGTGGCGCCATGTGGGAGCAGAGCATGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR CCA 90 bp | GAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTaGCTGAAAAAGTCATCCGGCTGGCAGGCTTCGATGAGCAAATGG | + |
|
Preference number: 1 (lower is better) Translates to: EVAFSLWSGTHVQQQ*LKKSSGWQASMSKW Trigger: CCATTTGCTCATCGAAGCCTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR CCA 90 bp | ATACTGTGGATACTCTACACTGCTTATTGCGCGAGCCTTGCCCCCTaGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: ILWILYTAYCASLAP*KSPSHCGAGLTYSS Trigger: GCTGCTGTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAGTATCCACAGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR GCA 90 bp | TTCAAGGAAGCAGCTCCACTCAGGCAGCTGGCATCCTGGAGGGCATaGTGCTCCTACCCACAATCCCGAGTCTTTTGCACTTACTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: FKEAAPLRQLASWRA*CSYPQSRVFCTYFL Trigger: CAGGAAGTAAGTGCAAAAGACTCGGGATTGTGGGTAGGAGCAGCATGCCCTCCAGGATGCCAGCTGCCTGAGTGGAGCTGCTTCCTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR TCA 90 bp | ATCTCTTCAGCTATCCCAGGAATTGCTCAGACCAGGCCTCTTTCATaGGGGACTCCCATTCAAGGAAGCAGCTCCACTCAGGCAGCTGGC | + |
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Preference number: 1 (lower is better) Translates to: ISSAIPGIAQTRPLS*GTPIQGSSSTQAAG Trigger: GCCAGCTGCCTGAGTGGAGCTGCTTCCTTGAATGGGAGTCCCTCATGAAAGAGGCCTGGTCTGAGCAATTCCTGGGATAGCTGAAGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR GCA 90 bp | AGAGGAAGTGATCCCACGCCTAAGAGCTCAGCACCAGCTGAATCGTaGAGATCTGGTGCTCCTGGCACACCGACCTCGGTATTACTTAAG | + |
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Preference number: 1 (lower is better) Translates to: RGSDPTPKSSAPAES*RSGAPGTPTSVLLK Trigger: CTTAAGTAATACCGAGGTCGGTGTGCCAGGAGCACCAGATCTGCACGATTCAGCTGGTGCTGAGCTCTTAGGCGTGGGATCACTTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR GCA 90 bp | AGCCCCTATCGCCCCAACGCTGATCTCTTCAGCTATCCCAGGAATTaGTCAGACCAGGCCTCTTTCATGAGGGACTCCCATTCAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SPYRPNADLFSYPRN*SDQASFMRDSHSRK Trigger: CTTCCTTGAATGGGAGTCCCTCATGAAAGAGGCCTGGTCTGAGCAATTCCTGGGATAGCTGAAGAGATCAGCGTTGGGGCGATAGGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR TCA 90 bp | ATCTGGTTGGCAGAAGCCCAGAGCCTCACACCTATGAGATTCAGATaGGATCAGAGGCAGCTGCAGACACTGAGACCCTGTAGGAACATC | + |
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Preference number: 1 (lower is better) Translates to: IWLAEAQSLTPMRFR*DQRQLQTLRPCRNI Trigger: GATGTTCCTACAGGGTCTCAGTGTCTGCAGCTGCCTCTGATCTCATCTGAATCTCATAGGTGTGAGGCTCTGGGCTTCTGCCAACCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR TCA 90 bp | CAGTTATCCAGCAGACATTTATTGCCACTCTTTTGTGCCAGGTGCTaGGGGAGGCAGAGATCACAGAGGGTAACCAGCCACAAATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: QLSSRHLLPLFCARC*GRQRSQRVTSHKCW Trigger: CCAGCATTTGTGGCTGGTTACCCTCTGTGATCTCTGCCTCCCTCAGCACCTGGCACAAAAGAGTGGCAATAAATGTCTGCTGGATAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144207.9 |
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| 3UTR CCA 90 bp | GAGGAAGAAACATCTAAACTGAGACTGGAAGGCTTCTCTTCAAGTTaGCCAGGTGGATGGAGACAGGTGTGGGAAAGGGGAAAGCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: EEETSKLRLEGFSSS*PGGWRQVWERGKQP Trigger: AGGCTGCTTTCCCCTTTCCCACACCTGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCCTTCCAGTCTCAGTTTAGATGTTTCTTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR CCA 90 bp | TCGTTTCCCTCTCTGTCTTGTATCCAACACATGCTATGGTCAGGCTaGGGAGGCATTCTTTTCAACTTTGTCCCCCTCCAACCTCCATAT | + |
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Preference number: 1 (lower is better) Translates to: SFPSLSCIQHMLWSG*GGILFNFVPLQPPY Trigger: ATATGGAGGTTGGAGGGGGACAAAGTTGAAAAGAATGCCTCCCCAGCCTGACCATAGCATGTGTTGGATACAAGACAGAGAGGGAAACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR TCA 90 bp | CCCTCCTCTGAGATTCAGTTTACTCTTAACACTGAGACAGCTGGCTaGAGGGGCTGGAGAGATAATTCAACAGTTAAGAGCACTGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: PSSEIQFTLNTETAG*RGWRDNSTVKSTAR Trigger: TCTGGCAGTGCTCTTAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCAGTGTTAAGAGTAAACTGAATCTCAGAGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR TCA 90 bp | AGCTCAGCAAGTCTGAGTCCAAATCTTAGTCTTTGGTTAGTCATGTaGCCCCAGGGGAAACACATAGCCTCTGATTCTCAGCTTCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: SSASLSPNLSLWLVM*PQGKHIASDSQLLH Trigger: ATGAAGAAGCTGAGAATCAGAGGCTATGTGTTTCCCCTGGGGTCACATGACTAACCAAAGACTAAGATTTGGACTCAGACTTGCTGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR TCA 90 bp | AATCAGGAACTGGAAGCAAGAGGCTTGAGCTGTCAATTTAGTTATTaGTTGCTCCCTCCAAGTGAATCTTTCCCTCCTCTGAGATTCAGT | + |
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Preference number: 1 (lower is better) Translates to: NQELEARGLSCQFSY*LLPPSESFPPLRFS Trigger: ACTGAATCTCAGAGGAGGGAAAGATTCACTTGGAGGGAGCAATCAATAACTAAATTGACAGCTCAAGCCTCTTGCTTCCAGTTCCTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCGCTGGTTCTGCAGGCTaGGGGGCTGAGGCTGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: GWAQALGIQGKTHGLEGPAGSAG*GAEAVD Trigger: ATCTACAGCCTCAGCCCCTCAGCCTGCAGAACCAGC...GGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTGGCTGCGAGCCTTGCCCCCTaGAAGTCGCCTTCTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: PGSRLLTVERDSRTAAVAASLAP*KSPSHC Trigger: ACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGC...AGCCACTGCTGCTGTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCAGCTGGTTCTGCAGGCTaGGGGGCTGAGGCTGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: DGLRLLGFKGRLMAWKGPAGSAG*GAEAVD Trigger: ATCTACAGCCTCAGCCCCTCAGCCTGCAGAACCAGC...TGGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTGGCTCCTCACCTCCAGCTATaGCTTTCCCCACAGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PGSRLLTVERDSRTAAVAPHLQL*LSPQVE Trigger: CTCCACCTGTGGGGAAAGCCATAGCTGGAGGTGAGG...AGCCACTGCTGCTGTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR CAA 90 bp | CAGCTACTGGAGGCCCATGCTCTGCTCCCACATGGCGCCACTGTATaGGCTGACCATGTGCTTTTTCCTGGTGCACCCCGCTTCCTACAG | + |
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Preference number: 2 (lower is better) Translates to: QLLEAHALLPHGATV*ADHVLFPGAPRFLQ Trigger: CTGTAGGAAGCGGGGTGCACCAGGAAAAAGCACATGGTCAGCCAATACAGTGGCGCCATGTGGGAGCAGAGCATGGGCCTCCAGTAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCCCCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTGGTCTGGAATCACTaGGGCCACCTTGGCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LPPGSRLLTVERDSRTAAVVWNH*GHLGLS Trigger: AGACAAGCCAAGGTGGCCTCAGTGATTCCAGACCAC...TGCTGCTGTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGAAGGGCCCAAGGAGACCTTGTCCTGGCAGTAGCTGAGAAAGTGCCTAAGGCTGGTTCTGCAGGCTaGGGGGCTGAGGCTGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: PGRAQGDLVLAVAEKVPKAGSAG*GAEAVD Trigger: ATCTACAGCCTCAGCCCCTCAGCCTGCAGAACCAGC...CTTAGGCACTTTCTCAGCTACTGCCAGGACAAGGTCTCCTTGGGCCCTTCCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | TTGCGCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACCAAAATAGGTTGGGGTaGTCTGGAATCACTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LREPCPLEVAFSLWSGTHQNRLG*SGITEA Trigger: GGCCTCAGTGATTCCAGACCACCCCAACCTATTTTG...GTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGAAGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCACTACAGCCACAAGCTaGTTCTGCAGGCTGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: ARKVGWAQALGIQGKTHGTTATS*FCRLRG Trigger: GCCCCTCAGCCTGCAGAACCAGCTTGTGGCTGTAGT...GCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCTTCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR CAA 90 bp | CTGGGCACATACTGTGGATACTCTACACTGCTTATTGCGCGAGCCTaGCCCCCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGT | + |
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Preference number: 2 (lower is better) Translates to: LGTYCGYSTLLIARA*PPGSRLLTVERDSR Trigger: ACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAGTATCCACAGTATGTGCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCAGTGGTCTGGAATCACTaGGGCCACCTTGGCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: DGLRLLGFKGRLMAWKGPVVWNH*GHLGLS Trigger: AGACAAGCCAAGGTGGCCTCAGTGATTCCAGACCAC...TGGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGTGGTCTGGAATCACTaGGGCCACCTTGGCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: GGMGSGSWDSREDSWPGRVVWNH*GHLGLS Trigger: AGACAAGCCAAGGTGGCCTCAGTGATTCCAGACCAC...CCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGGCTTCTCTTCAAGTTGGCCAGGTGGATGGAGACAGGTGTGGGAAAGGGGCTGGTTCTGCAGGCTaGGGGGCTGAGGCTGTAGAT | + |
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Preference number: 2 (lower is better) Translates to: WKASLQVGQVDGDRCGKGAGSAG*GAEAVD Trigger: ATCTACAGCCTCAGCCCCTCAGCCTGCAGAACCAGC...CCCTTTCCCACACCTGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCCTTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCAGGAAGAGAAGGCCCCTaGTTGTGTGCTGGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: STARRSLPKGPGFNSQHSGREGP*LCAGAG Trigger: CCCAGCTCCAGCACACAAGCAGGGGCCTTCTCTTCC...TGAGTGCTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACCTGGAAGGTAGGGTGGATATTTCGCCTGGGTCCTCCTGGAGGAAGAAACGCGAGCCTTGCCCCCTaGAAGTCGCCTTCTCACTGT | + |
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Preference number: 2 (lower is better) Translates to: GTWKVGWIFRLGPPGGRNASLAP*KSPSHC Trigger: ACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGC...GTTTCTTCCTCCAGGAGGACCCAGGCGAAATATCCACCCTACCTTCCAGGTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGCTTCTCTTCAAGTTGGCCAGGTGGATGGAGACAGGTGTGGGAAAGGGGCCAACTCACCTATACTaGACCCGGCTGAGGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GRLLFKLARWMETGVGKGPTHLY*TRLRSR Trigger: CCTGGACCTCAGCCGGGTCCAGTATAGGTGAGTTGG...CCCCTTTCCCACACCTGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGTGGTCTGGAATCACTaGGGCCACCTTGGCTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RWDGLRLLGFKGRLMAWKVVWNH*GHLGLS Trigger: AGACAAGCCAAGGTGGCCTCAGTGATTCCAGACCAC...CTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCTGCAGGCTGAGGGGCTaGGGCTGTAGATTCAAAATA | + |
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Preference number: 2 (lower is better) Translates to: GWAQALGIQGKTHGLEGPCRLRG*GCRFKI Trigger: TATTTTGAATCTACAGCCTCAGCCCCTCAGCCTGCA...GGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAACTACAGCCACAAGCTaGTTCTGCAGGCTGAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KVGWAQALGIQGKTHGLETTATS*FCRLRG Trigger: GCCCCTCAGCCTGCAGAACCAGCTTGTGGCTGTAGT...TTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCGCCCCAACGCTGATCTCTTCAGCTATCCCAGGAATTGCTCAGACCAGGCCTGTGGTCTGGAATCACTaGGGCCACCTTGGCTTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: IAPTLISSAIPGIAQTRPVVWNH*GHLGLS Trigger: AGACAAGCCAAGGTGGCCTCAGTGATTCCAGACCAC...AGGCCTGGTCTGAGCAATTCCTGGGATAGCTGAAGAGATCAGCGTTGGGGCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCAGGAAGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCTGCAGGCTGAGGGGCTaGGGCTGTAGATTCAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: ARKVGWAQALGIQGKTHGCRLRG*GCRFKI Trigger: TATTTTGAATCTACAGCCTCAGCCCCTCAGCCTGCA...GCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCTTCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTGGCTTCCAAGAAAAGATTCTaGACTCTGGGTCCCACCAAC | + |
|
Preference number: 2 (lower is better) Translates to: PGSRLLTVERDSRTAAVASKKRF*TLGPTN Trigger: GTTGGTGGGACCCAGAGTTCAGAATCTTTTCTTGGA...AGCCACTGCTGCTGTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | ATCGCCCCAACGCTGATCTCTTCAGCTATCCCAGGAATTGCTCAGACCAGGCCTGGCAGCTGCAGACACTaGGACCCTGTAGGAACATCT | + |
|
Preference number: 2 (lower is better) Translates to: IAPTLISSAIPGIAQTRPGSCRH*DPVGTS Trigger: AGATGTTCCTACAGGGTCTCAGTGTCTGCAGCTGCC...AGGCCTGGTCTGAGCAATTCCTGGGATAGCTGAAGAGATCAGCGTTGGGGCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR GCA 90 bp | GGATCTGCAGCTACTGGAGGCCCATGCTCTGCTCCCACATGGCGCCACTGTATTTGTGCTTTTTCCTGGTaGACCCCGCTTCCTACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: GSAATGGPCSAPTWRHCICAFSW*TPLPTV Trigger: TACTGTAGGAAGCGGGGTGCACCAGGAAAAAGCACA...AATACAGTGGCGCCATGTGGGAGCAGAGCATGGGCCTCCAGTAGCTGCAGATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTGGAAGGTAGGGTGGATATTTCGCCTGGGTCCTCCTGGAGGAAGAAACATCATCGTGCAGATCTGGTaGTCCTGGCACACCGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: TWKVGWIFRLGPPGGRNIIVQIW*SWHTDL Trigger: GAGGTCGGTGTGCCAGGAGCACCAGATCTGCACGAT...GATGTTTCTTCCTCCAGGAGGACCCAGGCGAAATATCCACCCTACCTTCCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR GCA 90 bp | AGACAGGTGTGGGAAAGGGGAAAGCAGCCTGTCAGCCTCACACATAAACACCACATCGTGCAGATCTGGTaGTCCTGGCACACCGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: RQVWERGKQPVSLTHKHHIVQIW*SWHTDL Trigger: GAGGTCGGTGTGCCAGGAGCACCAGATCTGCACGAT...GTGGTGTTTATGTGTGAGGCTGACAGGCTGCTTTCCCCTTTCCCACACCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTAGGCACTACAGCCACAAGCTGGTTCTGCAGGCTGAGGGGCTGAGGCTGCAAAATAGGTTGGGGTaGTCTGGAATCACTGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SFRHYSHKLVLQAEGLRLQNRLG*SGITEA Trigger: GGCCTCAGTGATTCCAGACCACCCCAACCTATTTTG...CAGCCTCAGCCCCTCAGCCTGCAGAACCAGCTTGTGGCTGTAGTGCCTAAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGCAAAATAGGTTGGGGTaGTCTGGAATCACTGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GGMGSGSWDSREDSWPGRQNRLG*SGITEA Trigger: GGCCTCAGTGATTCCAGACCACCCCAACCTATTTTG...CCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACAGGTGTGGGAAAGGGGAAAGCAGCCTGTCAGCCTCACACATAAACACCACTACAGCAGCAGTGGCTaGAAAAGTCATCCGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RQVWERGKQPVSLTHKHHYSSSG*KSHPAG Trigger: GCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTA...GTGGTGTTTATGTGTGAGGCTGACAGGCTGCTTTCCCCTTTCCCACACCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGCAAAATAGGTTGGGGTaGTCTGGAATCACTGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: RKVGWAQALGIQGKTHGLQNRLG*SGITEA Trigger: GGCCTCAGTGATTCCAGACCACCCCAACCTATTTTG...CAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGAAGGCTTCTCTTCAAGTTGGCCAGGTGGATGGAGACAGGTGTGGGAAAGGGCACGTACAGCAGCAGTaGCTGAAAAAGTCATCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: WKASLQVGQVDGDRCGKGHVQQQ*LKKSSG Trigger: GCCGGATGACTTTTTCAGCCACTGCTGCTGTACGTG...CCCTTTCCCACACCTGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCCTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACCTGGAAGGTAGGGTGGATATTTCGCCTGGGTCCTCCTGGAGGAAGAAACCACGTACAGCAGCAGTaGCTGAAAAAGTCATCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: GTWKVGWIFRLGPPGGRNHVQQQ*LKKSSG Trigger: GCCGGATGACTTTTTCAGCCACTGCTGCTGTACGTG...GTTTCTTCCTCCAGGAGGACCCAGGCGAAATATCCACCCTACCTTCCAGGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCTTCTCTTCAAGTTGGCCAGGTGGATGGAGACAGGTGTGGGAAAGGGGACACGTACAGCAGCAGTaGCTGAAAAAGTCATCCGGC | + |
|
Preference number: 2 (lower is better) Translates to: EGFSSSWPGGWRQVWERGHVQQQ*LKKSSG Trigger: GCCGGATGACTTTTTCAGCCACTGCTGCTGTACGTG...TCCCCTTTCCCACACCTGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCACTGCCAGACGCTCCCTACCTAAAGGACCTGGGTTCAATTCCCAGCACTCATTCAAGTTGGCCAGGTaGATGGAGACAGGTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: STARRSLPKGPGFNSQHSFKLAR*METGVG Trigger: TCCCACACCTGTCTCCATCCACCTGGCCAACTTGAA...TGAGTGCTGGGAATTGAACCCAGGTCCTTTAGGTAGGGAGCGTCTGGCAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCATGCTGCTCCTACCCACAATCCCGAGTCTTTTGCACTTACTTCCTGCGCCATGTGCTTTTTCCTaGTGCACCCCGCTTCCTACA | + |
|
Preference number: 2 (lower is better) Translates to: EGMLLLPTIPSLLHLLPAPCAFS*CTPLPT Trigger: TGTAGGAAGCGGGGTGCACCAGGAAAAAGCACATGG...CGCAGGAAGTAAGTGCAAAAGACTCGGGATTGTGGGTAGGAGCAGCATGCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | GGATCTGCAGCTACTGGAGGCCCATGCTCTGCTCCCACATGGCGCCACTGTATTTCCATTAGGTTTGCTTaGGAGTCCTTACATAACCCC | + |
|
Preference number: 2 (lower is better) Translates to: GSAATGGPCSAPTWRHCISIRFA*ESLHNP Trigger: GGGGTTATGTAAGGACTCTCAAGCAAACCTAATGGA...AATACAGTGGCGCCATGTGGGAGCAGAGCATGGGCCTCCAGTAGCTGCAGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR GCA 90 bp | CGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCTTCGATGAGCAAGTGGATACTCTACACTaGTTATTGCGCGAGCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: RTAAVAEKVIRLAGFDEQVDTLH*LLREPC Trigger: GCAAGGCTCGCGCAATAAGCAGTGTAGAGTATCCAC...TTGCTCATCGAAGCCTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | CGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCTTCGATGAGCAACAAAATAGGTTGGGGTaGTCTGGAATCACTGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: RTAAVAEKVIRLAGFDEQQNRLG*SGITEA Trigger: GGCCTCAGTGATTCCAGACCACCCCAACCTATTTTG...TTGCTCATCGAAGCCTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | GGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCAGATTCAAAATAGGTTaGGGTGGTCTGGAATCACTG | + |
|
Preference number: 2 (lower is better) Translates to: GWAQALGIQGKTHGLEGPRFKIG*GGLESL Trigger: CAGTGATTCCAGACCACCCCAACCTATTTTGAATCT...GGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACCTGGAAGGTAGGGTGGATATTTCGCCTGGGTCCTCCTGGAGGAAGAAACCTTGTGTGCTGGAGCTaGGCACATACTGTGGATACT | + |
|
Preference number: 2 (lower is better) Translates to: GTWKVGWIFRLGPPGGRNLVCWS*AHTVDT Trigger: AGTATCCACAGTATGTGCCCAGCTCCAGCACACAAG...GTTTCTTCCTCCAGGAGGACCCAGGCGAAATATCCACCCTACCTTCCAGGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | CGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCTTCGATGAGCAACTTGTGTGCTGGAGCTaGGCACATACTGTGGATACT | + |
|
Preference number: 2 (lower is better) Translates to: RTAAVAEKVIRLAGFDEQLVCWS*AHTVDT Trigger: AGTATCCACAGTATGTGCCCAGCTCCAGCACACAAG...TTGCTCATCGAAGCCTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | ACCTGGAAGGTAGGGTGGATATTTCGCCTGGGTCCTCCTGGAGGAAGAAACATCGGCTTCTCTTCAAGTTaGCCAGGTGGATGGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: TWKVGWIFRLGPPGGRNIGFSSS*PGGWRQ Trigger: CTGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCC...GATGTTTCTTCCTCCAGGAGGACCCAGGCGAAATATCCACCCTACCTTCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCAAGGAGACCTTGTCCTGGCAGTAGCTGAGAAAGTGCCTAAGGGAAAGCTTTGCAGGCTGAGGGGCTaGGGCTGTAGATTCAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: AQGDLVLAVAEKVPKGKLCRLRG*GCRFKI Trigger: TATTTTGAATCTACAGCCTCAGCCCCTCAGCCTGCA...AAGCTTTCCCTTAGGCACTTTCTCAGCTACTGCCAGGACAAGGTCTCCTTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTTCTCCTCACCTCCAGCTATGGCTTTCCCCACAGGTGGAGCTCATTGCAAAAGCACAGCAGGTTTaGTTCTGGGCACACCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSSPHLQLWLSPQVELIAKAQQV*FWAHLF Trigger: AAACAGGTGTGCCCAGAATCAAACCTGCTGTGCTTT...TGCAATGAGCTCCACCTGTGGGGAAAGCCATAGCTGGAGGTGAGGAGAACTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | CGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCTTCGATGAGCAAAAAGCACAGCAGGTTTaGTTCTGGGCACACCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: RTAAVAEKVIRLAGFDEQKAQQV*FWAHLF Trigger: AAACAGGTGTGCCCAGAATCAAACCTGCTGTGCTTT...TTGCTCATCGAAGCCTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAGGCTTCTCTTCAAGTTGGCCAGGTGGATGGAGACAGGTGTGGGAAAGGGGAGGATAGCTGTCTGCTaGGATAGCACAAGTACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GRLLFKLARWMETGVGKGRIAVC*DSTSTS Trigger: AGAAGTACTTGTGCTATCTCAGCAGACAGCTATCCT...CCCCTTTCCCACACCTGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 |
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| 3UTR-3UTR CCA 90 bp | GATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCAAGATTCAAAATAGGTTaGGGTGGTCTGGAATCACTG | + |
|
Preference number: 2 (lower is better) Translates to: DGLRLLGFKGRLMAWKGPRFKIG*GGLESL Trigger: CAGTGATTCCAGACCACCCCAACCTATTTTGAATCT...TGGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CCA 90 bp | CACCGACCTCGGTATTACTTAAGGGATCTGCAGCTACTGGAGGCCCATGCTCTGATGCTATGGTCAGGCTaGGGAGGCATTCTTTTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: HRPRYYLRDLQLLEAHALMLWSG*GGILFN Trigger: GTTGAAAAGAATGCCTCCCCAGCCTGACCATAGCAT...CAGAGCATGGGCCTCCAGTAGCTGCAGATCCCTTAAGTAATACCGAGGTCGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGGAAAGCAGCCTGTCAGCCTCACACATAAACACCACATTCAGAAAAGCACATACAGCAGCAGTGGCTaGAAAAGTCATCCGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RGKQPVSLTHKHHIQKSTYSSSG*KSHPAG Trigger: GCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTA...TGTGCTTTTCTGAATGTGGTGTTTATGTGTGAGGCTGACAGGCTGCTTTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR GCA 90 bp | ATCGCCCCAACGCTGATCTCTTCAGCTATCCCAGGAATTGCTCAGACCAGGCCTTTTGCACTTACTTCCTaGGGGGTTACAAAAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: IAPTLISSAIPGIAQTRPFALTS*GVTKAA Trigger: TGCTGCTTTTGTAACCCCGCAGGAAGTAAGTGCAAA...AGGCCTGGTCTGAGCAATTCCTGGGATAGCTGAAGAGATCAGCGTTGGGGCGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR GCA 90 bp | CGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCTTCGATGAGCAATTTGCACTTACTTCCTaGGGGGTTACAAAAGCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RTAAVAEKVIRLAGFDEQFALTS*GVTKAA Trigger: TGCTGCTTTTGTAACCCCGCAGGAAGTAAGTGCAAA...TTGCTCATCGAAGCCTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGAGATTCAAAATAGGTTaGGGTGGTCTGGAATCACTG | + |
|
Preference number: 2 (lower is better) Translates to: RWDGLRLLGFKGRLMAWKRFKIG*GGLESL Trigger: CAGTGATTCCAGACCACCCCAACCTATTTTGAATCT...CTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCTGGAAGGTAGGGTGGATATTTCGCCTGGGTCCTCCTGGAGGAAGAAACATCTCCATTAGGTTTGCTTaGGAGTCCTTACATAACCCC | + |
|
Preference number: 2 (lower is better) Translates to: TWKVGWIFRLGPPGGRNISIRFA*ESLHNP Trigger: GGGGTTATGTAAGGACTCTCAAGCAAACCTAATGGA...GATGTTTCTTCCTCCAGGAGGACCCAGGCGAAATATCCACCCTACCTTCCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCTGGAAGGTAGGGTGGATATTTCGCCTGGGTCCTCCTGGAGGAAGAAACATCGAAACACATAGCCTCTaGTTCTCAGCTTCTTCATGG | + |
|
Preference number: 2 (lower is better) Translates to: TWKVGWIFRLGPPGGRNIETHSL*FSASSW Trigger: CCATGAAGAAGCTGAGAATCAGAGGCTATGTGTTTC...GATGTTTCTTCCTCCAGGAGGACCCAGGCGAAATATCCACCCTACCTTCCAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGCCCAAGGAGACCTTGTCCTGGCAGTAGCTGAGAAAGTGCCTAAGGGAAAGAGATTCAAAATAGGTTaGGGTGGTCTGGAATCACTG | + |
|
Preference number: 2 (lower is better) Translates to: RAQGDLVLAVAEKVPKGKRFKIG*GGLESL Trigger: CAGTGATTCCAGACCACCCCAACCTATTTTGAATCT...CTTTCCCTTAGGCACTTTCTCAGCTACTGCCAGGACAAGGTCTCCTTGGGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGCATGCTGCTCCTACCCACAATCCCGAGTCTTTTGCACTTACTTCCTGCGATAGCTCAGCAAGTCTaGGTCCAAATCTTAGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: EGMLLLPTIPSLLHLLPAIAQQV*VQILVF Trigger: AAAGACTAAGATTTGGACTCAGACTTGCTGAGCTAT...CGCAGGAAGTAAGTGCAAAAGACTCGGGATTGTGGGTAGGAGCAGCATGCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAAAGCACAGCAGGTTTGATTCTGGGCACACCTGTTTTCAATGTCTTCTAAAAGGAAGAGAAGGCCCCTaGTTGTGTGCTGGAGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: EKHSRFDSGHTCFQCLLKGREGP*LCAGAG Trigger: CCCAGCTCCAGCACACAAGCAGGGGCCTTCTCTTCC...TTTTAGAAGACATTGAAAACAGGTGTGCCCAGAATCAAACCTGCTGTGCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAATAGCCATCTTGACCCATAGGTCAGATTCTGATGCGGCTGGTGGAAGAGAATGCAGGCTGAGGGGCTaGGGCTGTAGATTCAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: KIAILTHRSDSDAAGGRECRLRG*GCRFKI Trigger: TATTTTGAATCTACAGCCTCAGCCCCTCAGCCTGCA...TTCTCTTCCACCAGCCGCATCAGAATCTGACCTATGGGTCAAGATGGCTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAAAGCACAGCAGGTTTGATTCTGGGCACACCTGTTTTCAATGTCTTCTAAAAACTACAGCCACAAGCTaGTTCTGCAGGCTGAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: EKHSRFDSGHTCFQCLLKTTATS*FCRLRG Trigger: GCCCCTCAGCCTGCAGAACCAGCTTGTGGCTGTAGT...TTTTAGAAGACATTGAAAACAGGTGTGCCCAGAATCAAACCTGCTGTGCTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGACCCGGCTGAGGTCCAGGACCTGAGATATTTACTAATACAATTCCAACCCAAAGATTCTGAACTCTaGGTCCCACCAACAAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: LDPAEVQDLRYLLIQFQPKDSEL*VPPTNR Trigger: CCTGTTTGTTGGTGGGACCCAGAGTTCAGAATCTTT...GGGTTGGAATTGTATTAGTAAATATCTCAGGTCCTGGACCTCAGCCGGGTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCTCCCTCCAAGTGAATCTTTCCCTCCTCTGAGATTCAGTTTACTCTTAACATTCAAGTTGGCCAGGTaGATGGAGACAGGTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LLPPSESFPPLRFSLLLTFKLAR*METGVG Trigger: TCCCACACCTGTCTCCATCCACCTGGCCAACTTGAA...TGTTAAGAGTAAACTGAATCTCAGAGGAGGGAAAGATTCACTTGGAGGGAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTTCAATGTCTTCTAAAATAGCCATCTTGACCCATAGGTCAGATTCTGATGCGTACAGCAGCAGTGGCTaGAAAAGTCATCCGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: FSMSSKIAILTHRSDSDAYSSSG*KSHPAG Trigger: GCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTA...CGCATCAGAATCTGACCTATGGGTCAAGATGGCTATTTTAGAAGACATTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR TCA 90 bp | CACCTGTTTTCAATGTCTTCTAAAATAGCCATCTTGACCCATAGGTCAGATTCTTTTTGTGCCAGGTGCTaGGGGAGGCAGAGATCACAG | + |
|
Preference number: 2 (lower is better) Translates to: HLFSMSSKIAILTHRSDSFCARC*GRQRSQ Trigger: CTGTGATCTCTGCCTCCCTCAGCACCTGGCACAAAA...AGAATCTGACCTATGGGTCAAGATGGCTATTTTAGAAGACATTGAAAACAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 |
||
| 3UTR-3UTR GCA 90 bp | TTGCTCCCTCCAAGTGAATCTTTCCCTCCTCTGAGATTCAGTTTACTCTTAACAGTGGATACTCTACACTaGTTATTGCGCGAGCCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LLPPSESFPPLRFSLLLTVDTLH*LLREPC Trigger: GCAAGGCTCGCGCAATAAGCAGTGTAGAGTATCCAC...TGTTAAGAGTAAACTGAATCTCAGAGGAGGGAAAGATTCACTTGGAGGGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTCAATTCCAAAATCAAAGACAATCAGCAATGGGGAAGTGCATTTGAGCATGCTTGTGTGCTGGAGCTaGGCACATACTGTGGATACT | + |
|
Preference number: 2 (lower is better) Translates to: YSIPKSKTISNGEVHLSMLVCWS*AHTVDT Trigger: AGTATCCACAGTATGTGCCCAGCTCCAGCACACAAG...CATGCTCAAATGCACTTCCCCATTGCTGATTGTCTTTGATTTTGGAATTGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCATAACTCAGAGGTTTGTAATTATCTGTTCTAGACTTTCTTCCCTACCAAAGCCAGCAGACATTTATTaGCACTCTTTTGTGCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: AITQRFVIICSRLSSLPKPADIY*HSFVPG Trigger: ACCTGGCACAAAAGAGTGGCAATAAATGTCTGCTGG...CTTTGGTAGGGAAGAAAGTCTAGAACAGATAATTACAAACCTCTGAGTTATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 |
||
| 3UTR CCA 72 bp | CGCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCACTGTaGAGCGGGACTCACGTACAGCAGCAGTGGCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: REPCPLEVAFSL*SGTHVQQQWLK Trigger: TTTCAGCCACTGCTGCTGTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | TGGTGCACCCCGCTTCCTACAGTACACCAAGAGCTGTaGTCGCTATCGCTGCCGCCTTCACCACACCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WCTPLPTVHQEL*SLSLPPSPHQP Trigger: AGGCTGGTGTGGTGAAGGCGGCAGCGATAGCGACCACAGCTCTTGGTGTACTGTAGGAAGCGGGGTGCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGAGGGAGGCAGAGATCACAGAGGGTAACCAGCCACAAATGCTGGCCTCAAGAGAAGGCCCCTGCTaGTGTGCTGGAGCTGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VLREAEITEGNQPQMLASREGPC*CAGAGH Trigger: GTGCCCAGCTCCAGCACACAAGCAGGGGCCTTCTCT...TGAGGCCAGCATTTGTGGCTGGTTACCCTCTGTGATCTCTGCCTCCCTCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 |
||
| 3UTR GCA 72 bp | GCAGCTCCACTCAGGCAGCTGGCATCCTGGAGGGCATaGTGCTCCTACCCACAATCCCGAGTCTTTTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: AAPLRQLASWRA*CSYPQSRVFCT Trigger: AGTGCAAAAGACTCGGGATTGTGGGTAGGAGCAGCATGCCCTCCAGGATGCCAGCTGCCTGAGTGGAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | AGGCCCATGCTCTGCTCCCACATGGCGCCACTGTATTaGCTGACCATGTGCTTTTTCCTGGTGCACCCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: RPMLCSHMAPLY*LTMCFFLVHPA Trigger: AGCGGGGTGCACCAGGAAAAAGCACATGGTCAGCCAATACAGTGGCGCCATGTGGGAGCAGAGCATGGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | TTCAAGGAAGCAGCTCCACTCAGGCAGCTGGCATCCTaGAGGGCATGCTGCTCCTACCCACAATCCCGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FKEAAPLRQLAS*RACCSYPQSRV Trigger: GACTCGGGATTGTGGGTAGGAGCAGCATGCCCTCCAGGATGCCAGCTGCCTGAGTGGAGCTGCTTCCTTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR TCA 72 bp | CCATGCTCTGCTCCCACATGGCGCCACTGTATTGGCTaGCCATGTGCTTTTTCCTGGTGCACCCCGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PCSAPTWRHCIG*PCAFSWCTPLP Trigger: AGGAAGCGGGGTGCACCAGGAAAAAGCACATGGTCAGCCAATACAGTGGCGCCATGTGGGAGCAGAGCATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR GCA 72 bp | ACTGTGGATACTCTACACTGCTTATTGCGCGAGCCTTaGCCCCTGGAAGTCGCCTTCTCACTGTGGAGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: TVDTLHCLLREP*PLEVAFSLWSG Trigger: CCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAGTATCCACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR GCA 72 bp | TTCCTACAGTACACCAAGAGCTGTGGTCGCTATCGCTaGCGCCTTCACCACACCAGCCTCCCAGACTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FLQYTKSCGRYR*RLHHTSLPDFP Trigger: AGGGAAGTCTGGGAGGCTGGTGTGGTGAAGGCGGCAGCGATAGCGACCACAGCTCTTGGTGTACTGTAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR GCA 72 bp | GCTCCACTCAGGCAGCTGGCATCCTGGAGGGCATGCTaGTCCTACCCACAATCCCGAGTCTTTTGCACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: APLRQLASWRAC*SYPQSRVFCTY Trigger: GTAAGTGCAAAAGACTCGGGATTGTGGGTAGGAGCAGCATGCCCTCCAGGATGCCAGCTGCCTGAGTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | ATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATaGCCTGGAAGGGCCCAAGGAGACCTTGTCCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: MGSGSWDSREDS*PGRAQGDLVLA Trigger: TGCCAGGACAAGGTCTCCTTGGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | ATACTCTACACTGCTTATTGCGCGAGCCTTGCCCCCTaGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACG | + |
|
Preference number: 3 (lower is better) Translates to: ILYTAYCASLAP*KSPSHCGAGLT Trigger: CGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | GACTCCCATTCAAGGAAGCAGCTCCACTCAGGCAGCTaGCATCCTGGAGGGCATGCTGCTCCTACCCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: DSHSRKQLHSGS*HPGGHAAPTHN Trigger: ATTGTGGGTAGGAGCAGCATGCCCTCCAGGATGCCAGCTGCCTGAGTGGAGCTGCTTCCTTGAATGGGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR GCA 72 bp | GCTGGGCACATACTGTGGATACTCTACACTGCTTATTaGGCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: AGHILWILYTAY*ASLAPWKSPSH Trigger: GTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAGTATCCACAGTATGTGCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | TTCTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTaGCTGAAAAAGTCATCCGGCTGGCAGGCTTCGATG | + |
|
Preference number: 3 (lower is better) Translates to: FSLWSGTHVQQQ*LKKSSGWQASM Trigger: CATCGAAGCCTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACGTGAGTCCCGCTCCACAGTGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CAA 90 bp | GTCAGCCCCTATCGCCCCAACGCTGATCTCTTCAGCTATCCCAGGAATTGCTCAGATGGGCTCAGGCTCTaGGGATTCAAGGGAAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: VSPYRPNADLFSYPRNCSDGLRL*GFKGRL Trigger: GAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATC...TGAGCAATTCCTGGGATAGCTGAAGAGATCAGCGTTGGGGCGATAGGGGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR GCA 72 bp | TCAGATTCTGATGCGGCTGGTGGAAGAGAAGGCCCCTaGTTGTGTGCTGGAGCTGGGCACATACTGTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: SDSDAAGGREGP*LCAGAGHILWI Trigger: TATCCACAGTATGTGCCCAGCTCCAGCACACAAGCAGGGGCCTTCTCTTCCACCAGCCGCATCAGAATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR GCA 72 bp | TGCTCCCACATGGCGCCACTGTATTGGCTGACCATGTaGTTTTTCCTGGTGCACCCCGCTTCCTACAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: CSHMAPLYWLTM*FFLVHPASYST Trigger: TGTACTGTAGGAAGCGGGGTGCACCAGGAAAAAGCACATGGTCAGCCAATACAGTGGCGCCATGTGGGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR GCA 72 bp | CGCCCCAACGCTGATCTCTTCAGCTATCCCAGGAATTaGTCAGACCAGGCCTCTTTCATGAGGGACTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RPNADLFSYPRN*SDQASFMRDSH Trigger: ATGGGAGTCCCTCATGAAAGAGGCCTGGTCTGAGCAATTCCTGGGATAGCTGAAGAGATCAGCGTTGGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR CCA 72 bp | CACGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTaGCAGGCTTCGATGAGCAAATGGTCAGCCCCTATC | + |
|
Preference number: 3 (lower is better) Translates to: HVQQQWLKKSSG*QASMSKWSAPI Trigger: GATAGGGGCTGACCATTTGCTCATCGAAGCCTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR TCA 72 bp | GCTATCCCAGGAATTGCTCAGACCAGGCCTCTTTCATaGGGGACTCCCATTCAAGGAAGCAGCTCCACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AIPGIAQTRPLS*GTPIQGSSSTQ Trigger: CTGAGTGGAGCTGCTTCCTTGAATGGGAGTCCCTCATGAAAGAGGCCTGGTCTGAGCAATTCCTGGGATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTTAACACTGAGACAGCTGGCTGAAGGGGCTGGAGAGATAATTCAACAGTTAAGAGAAGGCCCCTGCTaGTGTGCTGGAGCTGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LLTLRQLAEGAGEIIQQLREGPC*CAGAGH Trigger: GTGCCCAGCTCCAGCACACAAGCAGGGGCCTTCTCT...TAACTGTTGAATTATCTCTCCAGCCCCTTCAGCCAGCTGTCTCAGTGTTAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR TCA 72 bp | TCGCCTGGGTCCTCCTGGAGGAAGAAACATCTAAACTaGGACTGGAAGGCTTCTCTTCAAGTTGGCCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SPGSSWRKKHLN*DWKASLQVGQV Trigger: CACCTGGCCAACTTGAAGAGAAGCCTTCCAGTCTCAGTTTAGATGTTTCTTCCTCCAGGAGGACCCAGGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | TGGTGGAAGAGAAGGCCCCTGCTTGTGTGCTGGAGCTaGGCACATACTGTGGATACTCTACACTGCTTATTG | + |
|
Preference number: 3 (lower is better) Translates to: WWKRRPLLVCWS*AHTVDTLHCLL Trigger: CAATAAGCAGTGTAGAGTATCCACAGTATGTGCCCAGCTCCAGCACACAAGCAGGGGCCTTCTCTTCCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| 3UTR-3UTR CAA 90 bp | ATCGCCCCAACGCTGATCTCTTCAGCTATCCCAGGAATTGCTCAGACCAGGCCTGCATTCTTTTCAACTTaGTCCCCCTCCAACCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: IAPTLISSAIPGIAQTRPAFFST*SPSNLH Trigger: ATGGAGGTTGGAGGGGGACAAAGTTGAAAAGAATGC...AGGCCTGGTCTGAGCAATTCCTGGGATAGCTGAAGAGATCAGCGTTGGGGCGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACCCGGCTGAGGTCCAGGACCTGAGATATTTACTAATACAATTCCAACCCAGGCTTCTCTTCAAGTaGGCCAGGTGGATGGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: LDPAEVQDLRYLLIQFQPRLLFK*ARWMET Trigger: TGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCCT...GGGTTGGAATTGTATTAGTAAATATCTCAGGTCCTGGACCTCAGCCGGGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCGACCTCGGTATTACTTAAGGGATCTGCAGCTACTGGAGGCCCATGCTCTGATTCTATTAGCCTTTTaGGTCCTACAAGGTCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HRPRYYLRDLQLLEAHALILLAF*VLQGPL Trigger: GAGGGGACCTTGTAGGACCAAAAAGGCTAATAGAAT...CAGAGCATGGGCCTCCAGTAGCTGCAGATCCCTTAAGTAATACCGAGGTCGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | ACATCTAAACTGAGACTGGAAGGCTTCTCTTCAAGTTaGCCAGGTGGATGGAGACAGGTGTGGGAAAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TSKLRLEGFSSS*PGGWRQVWERG Trigger: TCCCCTTTCCCACACCTGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCCTTCCAGTCTCAGTTTAGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | GAAACTGAAAATGTCTCGGGAACCTGGAAGGTAGGGTaGATATTTCGCCTGGGTCCTCCTGGAGGAAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ETENVSGTWKVG*IFRLGPPGGRN Trigger: GTTTCTTCCTCCAGGAGGACCCAGGCGAAATATCCACCCTACCTTCCAGGTTCCCGAGACATTTTCAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGCTTCTCTTCAAGTTGGCCAGGTGGATGGAGACAGGTGTGGGAAAGGGGAATGGGGAAGTGCATTaGAGCATGAAACTGAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: GRLLFKLARWMETGVGKGNGEVH*SMKLKM Trigger: CATTTTCAGTTTCATGCTCAAATGCACTTCCCCATT...CCCCTTTCCCACACCTGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | GCATTTGAGCATGAAACTGAAAATGTCTCGGGAACCTaGAAGGTAGGGTGGATATTTCGCCTGGGTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: AFEHETENVSGT*KVGWIFRLGPP Trigger: AGGAGGACCCAGGCGAAATATCCACCCTACCTTCCAGGTTCCCGAGACATTTTCAGTTTCATGCTCAAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | TCTCTGTCTTGTATCCAACACATGCTATGGTCAGGCTaGGGAGGCATTCTTTTCAACTTTGTCCCCCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLSCIQHMLWSG*GGILFNFVPLQ Trigger: TTGGAGGGGGACAAAGTTGAAAAGAATGCCTCCCCAGCCTGACCATAGCATGTGTTGGATACAAGACAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CCA 72 bp | TCGTTTCCCTCTCTGTCTTGTATCCAACACATGCTATaGTCAGGCTGGGGAGGCATTCTTTTCAACTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SFPSLSCIQHML*SGWGGILFNFV Trigger: GACAAAGTTGAAAAGAATGCCTCCCCAGCCTGACCATAGCATGTGTTGGATACAAGACAGAGAGGGAAACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR TCA 72 bp | CTGGAAGCAAGAGGCTTGAGCTGTCAATTTAGTTATTaGTTGCTCCCTCCAAGTGAATCTTTCCCTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LEARGLSCQFSY*LLPPSESFPPL Trigger: CAGAGGAGGGAAAGATTCACTTGGAGGGAGCAATCAATAACTAAATTGACAGCTCAAGCCTCTTGCTTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR TCA 72 bp | GTTAGTCATGTGACCCCAGGGGAAACACATAGCCTCTaGTTCTCAGCTTCTTCATGGGCACACAATAGAATT | + |
|
Preference number: 3 (lower is better) Translates to: VSHVTPGETHSL*FSASSWAHNRI Trigger: AATTCTATTGTGTGCCCATGAAGAAGCTGAGAATCAGAGGCTATGTGTTTCCCCTGGGGTCACATGACTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR TCA 72 bp | AGTCTGAGTCCAAATCTTAGTCTTTGGTTAGTCATGTaGCCCCAGGGGAAACACATAGCCTCTGATTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SLSPNLSLWLVM*PQGKHIASDSQ Trigger: CTGAGAATCAGAGGCTATGTGTTTCCCCTGGGGTCACATGACTAACCAAAGACTAAGATTTGGACTCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR GCA 72 bp | ATATCTCGTTTCCCTCTCTGTCTTGTATCCAACACATaGTATGGTCAGGCTGGGGAGGCATTCTTTTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: ISRFPLCLVSNT*YGQAGEAFFST Trigger: AGTTGAAAAGAATGCCTCCCCAGCCTGACCATAGCATGTGTTGGATACAAGACAGAGAGGGAAACGAGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR TCA 90 bp | GCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACATCATCGTAGTGCTCTaGGGCCGGCTTGCCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLAPWKSPSHCGAGLTYIIVVL*GRLANW Trigger: CCAATTGGCAAGCCGGCCTCAGAGCACTACGATGAT...GTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CAA 72 bp | GAGGCCCATGCTCTGCTCCCACATGGCGCCACTGTATaGGCTGACCATGTGCTTTTTCCTGGTGCACCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EAHALLPHGATV*ADHVLFPGAPR Trigger: GCGGGGTGCACCAGGAAAAAGCACATGGTCAGCCAATACAGTGGCGCCATGTGGGAGCAGAGCATGGGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR GCA 90 bp | GGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCTGCTGCTCCTGCTGCTaGAGCTCTGTCTCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GWAQALGIQGKTHGLEGPCCSCC*SSVSST Trigger: TGTGGAGGAGACAGAGCTGCAGCAGCAGGAGCAGCA...GGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTGGCTCACACGAGGGAAGAGTaGCGGGAACAAGGTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGSRLLTVERDSRTAAVAHTREE*REQGGH Trigger: ATGTCCACCTTGTTCCCGTCACTCTTCCCTCGTGTG...AGCCACTGCTGCTGTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR TCA 90 bp | GGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCCACACGAGGGAAGAGTaGCGGGAACAAGGTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: GWAQALGIQGKTHGLEGPHTREE*REQGGH Trigger: ATGTCCACCTTGTTCCCGTCACTCTTCCCTCGTGTG...GGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGCGGGACTCACGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGTGCTGCTCCTGCTGCTaGAGCTCTGTCTCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: WSGTHVQQQWLKKSSGWQCCSCC*SSVSST Trigger: TGTGGAGGAGACAGAGCTGCAGCAGCAGGAGCAGCA...CTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACGTGAGTCCCGCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTACACTGCTTATTGCGCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCACTGAGGCAGCTGGCATCCTaGAGGGCATGCTGCTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TLHCLLREPCPLEVAFSLRQLAS*RACCSY Trigger: GTAGGAGCAGCATGCCCTCCAGGATGCCAGCTGCCT...CAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098237.9 |
||
| CDS-3UTR TCA 90 bp | AGCTTTAGGCACTACAGCCACAAGCTGGTTCTGCAGGCTGAGGGGCTGAGGCTGCACACGAGGGAAGAGTaGCGGGAACAAGGTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SFRHYSHKLVLQAEGLRLHTREE*REQGGH Trigger: ATGTCCACCTTGTTCCCGTCACTCTTCCCTCGTGTG...CAGCCTCAGCCCCTCAGCCTGCAGAACCAGCTTGTGGCTGTAGTGCCTAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR TCA 90 bp | GATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCAATCATCGTAGTGCTCTaGGGCCGGCTTGCCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: DGLRLLGFKGRLMAWKGPIIVVL*GRLANW Trigger: CCAATTGGCAAGCCGGCCTCAGAGCACTACGATGAT...TGGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CCA 90 bp | CGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCTTCGATGAGCAACTCCACTCAGGCAGCTaGCATCCTGGAGGGCATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTAAVAEKVIRLAGFDEQLHSGS*HPGGHA Trigger: AGCATGCCCTCCAGGATGCCAGCTGCCTGAGTGGAG...TTGCTCATCGAAGCCTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098237.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGAAGGGCCCAAGGAGACCTTGTCCTGGCAGTAGCTGAGAAAGTGCCTAAGCACACGAGGGAAGAGTaGCGGGAACAAGGTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRAQGDLVLAVAEKVPKHTREE*REQGGH Trigger: ATGTCCACCTTGTTCCCGTCACTCTTCCCTCGTGTG...CTTAGGCACTTTCTCAGCTACTGCCAGGACAAGGTCTCCTTGGGCCCTTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR TCA 90 bp | GAAAGCTTTAGGCACTACAGCCACAAGCTGGTTCTGCAGGCTGAGGGGCTGAGGATCATCGTAGTGCTCTaGGGCCGGCTTGCCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESFRHYSHKLVLQAEGLRIIVVL*GRLANW Trigger: CCAATTGGCAAGCCGGCCTCAGAGCACTACGATGAT...CCTCAGCCCCTCAGCCTGCAGAACCAGCTTGTGGCTGTAGTGCCTAAAGCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGATCATCGTAGTGCTCTaGGGCCGGCTTGCCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RWDGLRLLGFKGRLMAWKIIVVL*GRLANW Trigger: CCAATTGGCAAGCCGGCCTCAGAGCACTACGATGAT...CTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTACAGTACACCAAGAGCTGTGGTCGCTATCGCTGCCGCCTTCACCACAATCATCGTAGTGCTCTaGGGCCGGCTTGCCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASYSTPRAVVAIAAAFTTIIVVL*GRLANW Trigger: CCAATTGGCAAGCCGGCCTCAGAGCACTACGATGAT...TGTGGTGAAGGCGGCAGCGATAGCGACCACAGCTCTTGGTGTACTGTAGGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR GCA 90 bp | GTCAGCCCCTATCGCCCCAACGCTGATCTCTTCAGCTATCCCAGGAATTGCTCATGCTGCTCCTGCTGCTaGAGCTCTGTCTCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VSPYRPNADLFSYPRNCSCCSCC*SSVSST Trigger: TGTGGAGGAGACAGAGCTGCAGCAGCAGGAGCAGCA...TGAGCAATTCCTGGGATAGCTGAAGAGATCAGCGTTGGGGCGATAGGGGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CAA 72 bp | TACTGTGGATACTCTACACTGCTTATTGCGCGAGCCTaGCCCCCTGGAAGTCGCCTTCTCACTGTGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YCGYSTLLIARA*PPGSRLLTVER Trigger: CCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAGTATCCACAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR TCA 90 bp | TGGAAGGCTTCTCTTCAAGTTGGCCAGGTGGATGGAGACAGGTGTGGGAAAGGGCACACGAGGGAAGAGTaGCGGGAACAAGGTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: WKASLQVGQVDGDRCGKGHTREE*REQGGH Trigger: ATGTCCACCTTGTTCCCGTCACTCTTCCCTCGTGTG...CCCTTTCCCACACCTGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCCTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR TCA 90 bp | CGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCTGGCAGGCTTCGATGAGCAAATCATCGTAGTGCTCTaGGGCCGGCTTGCCAATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTAAVAEKVIRLAGFDEQIIVVL*GRLANW Trigger: CCAATTGGCAAGCCGGCCTCAGAGCACTACGATGAT...TTGCTCATCGAAGCCTGCCAGCCGGATGACTTTTTCAGCCACTGCTGCTGTACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGGAGACCTTGTCCTGGCAGTAGCTGAGAAAGTGCCTAAGGGAAAGCTTTGCTGCTCCTGCTGCTaGAGCTCTGTCTCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: AQGDLVLAVAEKVPKGKLCCSCC*SSVSST Trigger: TGTGGAGGAGACAGAGCTGCAGCAGCAGGAGCAGCA...AAGCTTTCCCTTAGGCACTTTCTCAGCTACTGCCAGGACAAGGTCTCCTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CAA 72 bp | AGCTGGGCACATACTGTGGATACTCTACACTGCTTATaGCGCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SWAHTVDTLHCL*REPCPLEVAFS Trigger: TGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAGTATCCACAGTATGTGCCCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CAA 72 bp | GAGGGCATGCTGCTCCTACCCACAATCCCGAGTCTTTaGCACTTACTTCCTGCGGGGTTACAAAAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EGMLLLPTIPSL*HLLPAGLQKQQ Trigger: CTGCTGCTTTTGTAACCCCGCAGGAAGTAAGTGCAAAAGACTCGGGATTGTGGGTAGGAGCAGCATGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR TCA 90 bp | TCACTGTGGAGCGGGACTCACGTACAGCAGCAGTGGCTGAAAAAGTCATCCGGCCACTTACTTCCTCATTaGCCTCTCCATCATCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLWSGTHVQQQWLKKSSGHLLPH*PLHHQV Trigger: CACCTGATGATGGAGAGGTCAATGAGGAAGTAAGTG...GCCGGATGACTTTTTCAGCCACTGCTGCTGTACGTGAGTCCCGCTCCACAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098237.9 |
||
| CDS-3UTR GCA 90 bp | TTGACCCATAGGTCAGATTCTGATGCGGCTGGTGGAAGAGAAGGCCCCTGCTTGCAATCCCGAGTCTTTTaGACTTACTTCCTCATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTHRSDSDAAGGREGPCLQSRVF*TYFLID Trigger: GTCAATGAGGAAGTAAGTGCAAAAGACTCGGGATTG...CAAGCAGGGGCCTTCTCTTCCACCAGCCGCATCAGAATCTGACCTATGGGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098237.9 |
||
| CDS-3UTR GCA 90 bp | CACCTGTTTTCAATGTCTTCTAAAATAGCCATCTTGACCCATAGGTCAGATTCTTGCTGCTCCTGCTGCTaGAGCTCTGTCTCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HLFSMSSKIAILTHRSDSCCSCC*SSVSST Trigger: TGTGGAGGAGACAGAGCTGCAGCAGCAGGAGCAGCA...AGAATCTGACCTATGGGTCAAGATGGCTATTTTAGAAGACATTGAAAACAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| 3UTR CAA 72 bp | GCACACCTGTTTTCAATGTCTTCTAAAATAGCCATCTaGACCCATAGGTCAGATTCTGATGCGGCTGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AHLFSMSSKIAI*THRSDSDAAGG Trigger: TCCACCAGCCGCATCAGAATCTGACCTATGGGTCAAGATGGCTATTTTAGAAGACATTGAAAACAGGTGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACAGCAGCAGTGGCTGAATGCTCTGAGGCCGGCTaGCCAATTGGTACCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSRLLTVERDSRTAAVAECSEAG*PIGTRL Trigger: CAACCTGGTACCAATTGGCAAGCCGGCCTCAGAGCA...TTCAGCCACTGCTGCTGTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| CDS-3UTR CAA 90 bp | AGCTTTAGGCACTACAGCCACAAGCTGGTTCTGCAGGCTGAGGGGCTGAGGCTGTGCTCTGAGGCCGGCTaGCCAATTGGTACCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFRHYSHKLVLQAEGLRLCSEAG*PIGTRL Trigger: CAACCTGGTACCAATTGGCAAGCCGGCCTCAGAGCA...CAGCCTCAGCCCCTCAGCCTGCAGAACCAGCTTGTGGCTGTAGTGCCTAAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| CDS-3UTR CAA 90 bp | AGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGTGCTCTGAGGCCGGCTaGCCAATTGGTACCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RWDGLRLLGFKGRLMAWKCSEAG*PIGTRL Trigger: CAACCTGGTACCAATTGGCAAGCCGGCCTCAGAGCA...CTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| CDS-3UTR CAA 90 bp | GAAAGCTTTAGGCACTACAGCCACAAGCTGGTTCTGCAGGCTGAGGGGCTGAGGTTTCTCTGCGATGCTTaGGAGCCAGGCCTGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESFRHYSHKLVLQAEGLRFLCDA*EPGLML Trigger: CAGCATCAGGCCTGGCTCCAAAGCATCGCAGAGAAA...CCTCAGCCCCTCAGCCTGCAGAACCAGCTTGTGGCTGTAGTGCCTAAAGCTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| CDS-3UTR CAA 90 bp | CTCTACACTGCTTATTGCGCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCACTGTTTTCTCTGCGATGCTTaGGAGCCAGGCCTGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LYTAYCASLAPWKSPSHCFLCDA*EPGLML Trigger: CAGCATCAGGCCTGGCTCCAAAGCATCGCAGAGAAA...ACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGTTTCTCTGCGATGCTTaGGAGCCAGGCCTGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKVGWAQALGIQGKTHGLFLCDA*EPGLML Trigger: CAGCATCAGGCCTGGCTCCAAAGCATCGCAGAGAAA...CAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CAA 90 bp | TACACTGCTTATTGCGCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCACTGTGGATTTCTCTGCGATGCTTaGGAGCCAGGCCTGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: YTAYCASLAPWKSPSHCGFLCDA*EPGLML Trigger: CAGCATCAGGCCTGGCTCCAAAGCATCGCAGAGAAA...TCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CAA 90 bp | GCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCACTGTGGAGCGGGACTCACGTACATTGGTACCAGGTTGTaGTCTTTCTCTGCGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASLAPWKSPSHCGAGLTYIGTRL*SFSAML Trigger: AAGCATCGCAGAGAAAGACAACAACCTGGTACCAAT...GTACGTGAGTCCCGCTCCACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCCCAAGGAGACCTTGTCCTGGCAGTAGCTGAGAAAGTGCCTAAGGGAAAGTGCTCTGAGGCCGGCTaGCCAATTGGTACCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RAQGDLVLAVAEKVPKGKCSEAG*PIGTRL Trigger: CAACCTGGTACCAATTGGCAAGCCGGCCTCAGAGCA...CTTTCCCTTAGGCACTTTCTCAGCTACTGCCAGGACAAGGTCTCCTTGGGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAATGCTCTGAGGCCGGCTaGCCAATTGGTACCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KVGWAQALGIQGKTHGLECSEAG*PIGTRL Trigger: CAACCTGGTACCAATTGGCAAGCCGGCCTCAGAGCA...TTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS GCA 90 bp | TTCAAGGAAGCAGCTCCACTCAGGCAGCTGGCATCCTGGAGGGCATaGTGCTCCTACCCACAATCCCGAGTCTTTTGCACTTACTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FKEAAPLRQLASWRA*CSYPQSRVFCTYFL Trigger: GAGGAAGTAAGTGCAAAAGACTCGGGATTGTGGGTAGGAGCAGCATGCCCTCCAGGATGCCAGCTGCCTGAGTGGAGCTGCTTCCTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098237.9 |
||
| CDS-3UTR CAA 90 bp | AGGGCCCAAGGAGACCTTGTCCTGGCAGTAGCTGAGAAAGTGCCTAAGGGAAAGTTTCTCTGCGATGCTTaGGAGCCAGGCCTGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAQGDLVLAVAEKVPKGKFLCDA*EPGLML Trigger: CAGCATCAGGCCTGGCTCCAAAGCATCGCAGAGAAA...CTTTCCCTTAGGCACTTTCTCAGCTACTGCCAGGACAAGGTCTCCTTGGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS GCA 90 bp | AAGGAAGCAGCTCCACTCAGGCAGCTGGCATCCTGGAGGGCATGCTaGTCCTACCCACAATCCCGAGTCTTTTGCACTTACTTCCTCATT | + |
|
Preference number: 5 (lower is better) Translates to: KEAAPLRQLASWRAC*SYPQSRVFCTYFLI Trigger: AATGAGGAAGTAAGTGCAAAAGACTCGGGATTGTGGGTAGGAGCAGCATGCCCTCCAGGATGCCAGCTGCCTGAGTGGAGCTGCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098237.9 |
||
| CDS-3UTR CAA 90 bp | GTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGATTGGTACCAGGTTGTaGTCTTTCTCTGCGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VGWAQALGIQGKTHGLEGIGTRL*SFSAML Trigger: AAGCATCGCAGAGAAAGACAACAACCTGGTACCAAT...CCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CAA 90 bp | GATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAGGGCCCAATTGGTACCAGGTTGTaGTCTTTCTCTGCGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: DGLRLLGFKGRLMAWKGPIGTRL*SFSAML Trigger: AAGCATCGCAGAGAAAGACAACAACCTGGTACCAAT...TGGGCCCTTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCTTCTCTTCAAGTTGGCCAGGTGGATGGAGACAGGTGTGGGAAAGGGGGCACTTACTTCCTCATaGACCTCTCCATCATCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRLLFKLARWMETGVGKGALTSS*TSPSSG Trigger: ACCTGATGATGGAGAGGTCAATGAGGAAGTAAGTGC...CCCCTTTCCCACACCTGTCTCCATCCACCTGGCCAACTTGAAGAGAAGCCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098237.9 |
||
| CDS-3UTR CAA 90 bp | CTCTACACTGCTTATTGCGCGAGCCTTGCCCCCTGGAAGTCGCCTTCTCACTGTATTGGTACCAGGTTGTaGTCTTTCTCTGCGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LYTAYCASLAPWKSPSHCIGTRL*SFSAML Trigger: AAGCATCGCAGAGAAAGACAACAACCTGGTACCAAT...ACAGTGAGAAGGCGACTTCCAGGGGGCAAGGCTCGCGCAATAAGCAGTGTAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTGGGATGGGCTCAGGCTCTTGGGATTCAAGGGAAGACTCATGGCCTGGAAATTGGTACCAGGTTGTaGTCTTTCTCTGCGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KVGWAQALGIQGKTHGLEIGTRL*SFSAML Trigger: AAGCATCGCAGAGAAAGACAACAACCTGGTACCAAT...TTCCAGGCCATGAGTCTTCCCTTGAATCCCAAGAGCCTGAGCCCATCCCACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035395.14 ENSMUST00000106973.8 ENSMUST00000106978.8 ENSMUST00000144207.9 ENSMUST00000178851.2 |
||
| CDS-3UTR CAA 90 bp | AAAATAGCCATCTTGACCCATAGGTCAGATTCTGATGCGGCTGGTGGAAGAGAATGCTCTGAGGCCGGCTaGCCAATTGGTACCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: KIAILTHRSDSDAAGGRECSEAG*PIGTRL Trigger: CAACCTGGTACCAATTGGCAAGCCGGCCTCAGAGCA...TTCTCTTCCACCAGCCGCATCAGAATCTGACCTATGGGTCAAGATGGCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| CDS-3UTR CAA 90 bp | AGACAGGTGTGGGAAAGGGGAAAGCAGCCTGTCAGCCTCACACATAAACACCACATTGGTACCAGGTTGTaGTCTTTCTCTGCGATGCTT | + |
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Preference number: 5 (lower is better) Translates to: RQVWERGKQPVSLTHKHHIGTRL*SFSAML Trigger: AAGCATCGCAGAGAAAGACAACAACCTGGTACCAAT...GTGGTGTTTATGTGTGAGGCTGACAGGCTGCTTTCCCCTTTCCCACACCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098237.9 ENSMUST00000144207.9 ENSMUST00000178851.2 |
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| CDS GCA 72 bp | AGGGCATGCTGCTCCTACCCACAATCCCGAGTCTTTTaGACTTACTTCCTCATTGACCTCTCCATCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: RACCSYPQSRVF*TYFLIDLSIIR Trigger: CCTGATGATGGAGAGGTCAATGAGGAAGTAAGTGCAAAAGACTCGGGATTGTGGGTAGGAGCAGCATGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098237.9 |
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| CDS CAA 72 bp | CGGGAACAAGGTGGACATGGCTCTAGCTCTTTGATTTaGGCCAATACACTTAACCTCTCTGGGCCTCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: REQGGHGSSSLI*ANTLNLSGPQF Trigger: AAACTGAGGCCCAGAGAGGTTAAGTGTATTGGCCAAAATCAAAGAGCTAGAGCCATGTCCACCTTGTTCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035395.14 |
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