Pregenerated sensors for ANAPC11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025135Ensembl transcript IDs: ENSMUST00000026128.10, ENSMUST00000093140.5
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCACCCAGGGCAGGCACAGGTGGATTAGAGCAGAGAGAGCTTCCTaGGGTCAGTGGTGTAGGCTTCCTCCTCCAAGGCCTCCTGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: ATQGRHRWIRAERAS*GQWCRLPPPRPPAP Trigger: GGGAGCAGGAGGCCTTGGAGGAGGAAGCCTACACCACTGACCTCAGGAAGCTCTCTCTGCTCTAATCCACCTGTGCCTGCCCTGGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR CCA 90 bp | GCTGTTCCAGAGGACACAGGTTGGATTCCCAGTACCATGCGCAGGTaGCTCACAGGGCAGTTCACATCTGTCTGGAACTCTAGTTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: AVPEDTGWIPSTMRR*LTGQFTSVWNSSSR Trigger: CCTGGAACTAGAGTTCCAGACAGATGTGAACTGCCCTGTGAGCCACCTGCGCATGGTACTGGGAATCCAACCTGTGTCCTCTGGAACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR GCA 90 bp | GTGGAAGACTCTGATGCTGGGCTTGCCCTTTCTGAGGAGAAGTGTTaGGCTCAGGCTCCAACCTTCAGAAAAGCCTGGGCAAGCAACTCT | + |
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Preference number: 1 (lower is better) Translates to: VEDSDAGLALSEEKC*AQAPTFRKAWASNS Trigger: AGAGTTGCTTGCCCAGGCTTTTCTGAAGGTTGGAGCCTGAGCGCAACACTTCTCCTCAGAAAGGGCAAGCCCAGCATCAGAGTCTTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR CCA 90 bp | GGATGGCCCGGAATGAAGTCCCAGAGAATGTTCCTAGAAGAGGCATaGAGGACCCTCCAAGAAAATGAGCAGACTGGAGATGGAAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: GWPGMKSQRMFLEEA*RTLQENEQTGDGRH Trigger: GTGCCTTCCATCTCCAGTCTGCTCATTTTCTTGGAGGGTCCTCCATGCCTCTTCTAGGAACATTCTCTGGGACTTCATTCCGGGCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR TCA 90 bp | GGACCCTCCAAGAAAATGAGCAGACTGGAGATGGAAGGCACAAGCTaGACAAGCCAGGGTACACCATACCTGTCAGCTCAAGGACTTCCA | + |
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Preference number: 1 (lower is better) Translates to: GPSKKMSRLEMEGTS*TSQGTPYLSAQGLP Trigger: TGGAAGTCCTTGAGCTGACAGGTATGGTGTACCCTGGCTTGTTCAGCTTGTGCCTTCCATCTCCAGTCTGCTCATTTTCTTGGAGGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR TCA 90 bp | AGGGTAACATGTAAGAGACTTGTGGTATGTGCAGGAGCCAGAACATaGATAGGACTGTGTCTGGCCACCCAGGGCAGGCACAGGTGGATT | + |
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Preference number: 1 (lower is better) Translates to: RVTCKRLVVCAGART*IGLCLATQGRHRWI Trigger: AATCCACCTGTGCCTGCCCTGGGTGGCCAGACACAGTCCTATTCATGTTCTGGCTCCTGCACATACCACAAGTCTCTTACATGTTACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR GCA 90 bp | TGGGCAACAAGTCTCAGAGCCAACAAACATGTAGATGATCCAGATTaGTTGGAACCAGCCCCTAGTAGTCTACTTCCCCGGCTGTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: WATSLRANKHVDDPD*LEPAPSSLLPRLWS Trigger: GCTCCACAGCCGGGGAAGTAGACTACTAGGGGCTGGTTCCAAGCAATCTGGATCATCTACATGTTTGTTGGCTCTGAGACTTGTTGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR GCA 90 bp | AACTCATCTTGCCAATGCAACAAGGTTGGAGTTGTTTTGGTGTGGTaGTCACGGTGGAAGACTCTGATGCTGGGCTTGCCCTTTCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: NSSCQCNKVGVVLVW*SRWKTLMLGLPFLR Trigger: CCTCAGAAAGGGCAAGCCCAGCATCAGAGTCTTCCACCGTGAGCACCACACCAAAACAACTCCAACCTTGTTGCATTGGCAAGATGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR CCA 90 bp | TGCCAATGCAACAAGGTTGGAGTTGTTTTGGTGTGGTGCTCACGGTaGAAGACTCTGATGCTGGGCTTGCCCTTTCTGAGGAGAAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: CQCNKVGVVLVWCSR*KTLMLGLPFLRRSV Trigger: AACACTTCTCCTCAGAAAGGGCAAGCCCAGCATCAGAGTCTTCCACCGTGAGCACCACACCAAAACAACTCCAACCTTGTTGCATTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR TCA 90 bp | TATAAAGAGGAAGAAAGAAAATGTCCTACAGGCCTGCCCTCAGCCTaGTCTTACGGAGGCATTTTCCCAACTGAGGATCACGCCTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: YKEEERKCPTGLPSA*SYGGIFPTEDHASQ Trigger: CTGAGAGGCGTGATCCTCAGTTGGGAAAATGCCTCCGTAAGATCAGGCTGAGGGCAGGCCTGTAGGACATTTTCTTTCTTCCTCTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR CCA 90 bp | AATAACTCATCTTGCCAATGCAACAAGGTTGGAGTTGTTTTGGTGTaGTGCTCACGGTGGAAGACTCTGATGCTGGGCTTGCCCTTTCTG | + |
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Preference number: 1 (lower is better) Translates to: NNSSCQCNKVGVVLV*CSRWKTLMLGLPFL Trigger: CAGAAAGGGCAAGCCCAGCATCAGAGTCTTCCACCGTGAGCACCACACCAAAACAACTCCAACCTTGTTGCATTGGCAAGATGAGTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR GCA 90 bp | ATTTTTCCAAGCTGGAGAGATGGCTCAACAGTTAAAAGCACTAACTaGTGTTCCAGAGGACACAGGTTGGATTCCCAGTACCATGCGCAG | + |
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Preference number: 1 (lower is better) Translates to: IFPSWRDGSTVKSTN*CSRGHRLDSQYHAQ Trigger: CTGCGCATGGTACTGGGAATCCAACCTGTGTCCTCTGGAACAGCAGTTAGTGCTTTTAACTGTTGAGCCATCTCTCCAGCTTGGAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR GCA 90 bp | AGATGCCTTCTTCTGGCCTCTATAGGCACTGGGAGAATGCATGTATaGACAGAAACGCTTGCAGGCAAAACATCCACACACATAAAATGT | + |
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Preference number: 1 (lower is better) Translates to: RCLLLASIGTGRMHV*TETLAGKTSTHIKC Trigger: ACATTTTATGTGTGTGGATGTTTTGCCTGCAAGCGTTTCTGTGCATACATGCATTCTCCCAGTGCCTATAGAGGCCAGAAGAAGGCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CCA 90 bp | GCCATGAAGGATTCTGAGGTTAGCCCGGGAACAGAAGCACTCAGGAGCACTGCCCTACTTCCCCGGCTGTaGAGCACACAGGGAGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: AMKDSEVSPGTEALRSTALLPRL*STQGVQ Trigger: CTGCACTCCCTGTGTGCTCCACAGCCGGGGAAGTAG...GGCAGTGCTCCTGAGTGCTTCTGTTCCCGGGCTAACCTCAGAATCCTTCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCCTTTCAACCTTGTCCCAGCCAAACAGAAAGCATCCTTGTCCCCGGCACCACCACTGTGCTGTGTaGAGGGGACTTGGGGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: KLLSTLSQPNRKHPCPRHHHCAV*RGLGVL Trigger: CAGCACCCCAAGTCCCCTCCACACAGCACAGTGGTG...GTGCCGGGGACAAGGATGCTTTCTGTTTGGCTGGGACAAGGTTGAAAGGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| 3UTR-3UTR TCA 90 bp | GGTGGATTAGAGCAGAGAGAGCTTCCTGAGGTCAGTGGTGTAGGCTTCCTCCTCCCTCCTCCTCCTGTCTaGGCTGTGACTCAGATTACG | + |
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Preference number: 2 (lower is better) Translates to: GGLEQRELPEVSGVGFLLPPPPV*AVTQIT Trigger: CGTAATCTGAGTCACAGCTCAGACAGGAGGAGGAGG...GAGGAGGAAGCCTACACCACTGACCTCAGGAAGCTCTCTCTGCTCTAATCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR TCA 90 bp | GTACACCATACCTGTCAGCTCAAGGACTTCCAAATCCACCAATCCTGGCTCCCCCAGCTTGGCTCTGCCTaGATCTCTCCTCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VHHTCQLKDFQIHQSWLPQLGSA*ISPPPP Trigger: AGGAGGAGGAGGAGAGATTCAGGCAGAGCCAAGCTG...GGGGAGCCAGGATTGGTGGATTTGGAAGTCCTTGAGCTGACAGGTATGGTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR GCA 90 bp | GTACACCATACCTGTCAGCTCAAGGACTTCCAAATCCACCAATCCTGGCTCCCCTGCCCAGCTTGGCTCTaGCTGAATCTCTCCTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: VHHTCQLKDFQIHQSWLPCPAWL*LNLSSS Trigger: GGAGGAGGAGAGATTCAGGCAGAGCCAAGCTGGGCA...GGGGAGCCAGGATTGGTGGATTTGGAAGTCCTTGAGCTGACAGGTATGGTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR GCA 90 bp | GTACACCATACCTGTCAGCTCAAGGACTTCCAAATCCACCAATCCTGGCTCCCCAGCAGCTGCCAGCTTTaGTCAGCTAGGGCTGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: VHHTCQLKDFQIHQSWLPSSCQL*SARAGD Trigger: ATCCCCAGCCCTAGCTGAGCAAAGCTGGCAGCTGCT...GGGGAGCCAGGATTGGTGGATTTGGAAGTCCTTGAGCTGACAGGTATGGTGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR CAA 90 bp | GTTGTTTTGGTGTGGTGCTCACGGTGGAAGACTCTGATGCTGGGCTaGCCCTTTCTGAGGAGAAGTGTTGCGCTCAGGCTCCAACCTTCA | + |
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Preference number: 2 (lower is better) Translates to: VVLVWCSRWKTLMLG*PFLRRSVALRLQPS Trigger: TGAAGGTTGGAGCCTGAGCGCAACACTTCTCCTCAGAAAGGGCAAGCCCAGCATCAGAGTCTTCCACCGTGAGCACCACACCAAAACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CCA 90 bp | GTACACCATACCTGTCAGCTCAAGGACTTCCAAATCCACCAATCCTGGCTCCCCGGTCTTTGCCCAGCTTaGCTCTGCCTGAATCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: VHHTCQLKDFQIHQSWLPGLCPA*LCLNLS Trigger: GGAGAGATTCAGGCAGAGCCAAGCTGGGCAAAGACC...GGGGAGCCAGGATTGGTGGATTTGGAAGTCCTTGAGCTGACAGGTATGGTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGGACTTCCAAATCCACCAATCCTGGCTCCCCTCTGCAGCTCTTGGGGGTGTGCAGAGGTGTTACTaGGAAGAGTCAGAGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: LKDFQIHQSWLPSAALGGVQRCY*EESESE Trigger: CTCACTCTCTGACTCTTCCCAGTAACACCTCTGCAC...ACCCCCAAGAGCTGCAGAGGGGAGCCAGGATTGGTGGATTTGGAAGTCCTTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CCA 90 bp | AAACATGCTGCTAGCAGCATCAGTATGTCAAGAAACCAGGCAAGCAGAGGCCTCACAGACCGAGATCTCTaGGCACCACTGTGCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: KHAASSISMSRNQASRGLTDRDL*APLCCV Trigger: CACACAGCACAGTGGTGCCCAGAGATCTCGGTCTGT...GAGGCCTCTGCTTGCCTGGTTTCTTGACATACTGATGCTGCTAGCAGCATGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAAGGACTTCCAAATCCACCAATCCTGGCTCCCCTCTGCAGCTCTTGGGGGTGATGCCAGCCTAAATTaGTTTCTACCCAGGAGCTTA | + |
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Preference number: 2 (lower is better) Translates to: LKDFQIHQSWLPSAALGGDASLN*FLPRSL Trigger: TAAGCTCCTGGGTAGAAACCAATTTAGGCTGGCATC...ACCCCCAAGAGCTGCAGAGGGGAGCCAGGATTGGTGGATTTGGAAGTCCTTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAGATGGAAGGCACAAGCTGAACAAGCCAGGGTACACCATACCTGTCAGCGACAAGGTGGTAAGTTaGCCAGAACTCCTAGATGCC | + |
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Preference number: 2 (lower is better) Translates to: TGDGRHKLNKPGYTIPVSDKVVS*PELLDA Trigger: GGCATCTAGGAGTTCTGGCCAACTTACCACCTTGTC...GCTGACAGGTATGGTGTACCCTGGCTTGTTCAGCTTGTGCCTTCCATCTCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CCA 90 bp | GGTGGATTAGAGCAGAGAGAGCTTCCTGAGGTCAGTGGTGTAGGCTTCCTCCTCTCCTTACCCCTGAAATaGCCCTCTTCACTCCTGATA | + |
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Preference number: 2 (lower is better) Translates to: GGLEQRELPEVSGVGFLLSLPLK*PSSLLI Trigger: TATCAGGAGTGAAGAGGGCCATTTCAGGGGTAAGGA...GAGGAGGAAGCCTACACCACTGACCTCAGGAAGCTCTCTCTGCTCTAATCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CCA 90 bp | CATCTTGCCAATGCAACAAGGTTGGAGTTGTTTTGGTGTGGTGCTCACGGTGGAAGCGGACATGCTACATaGGTGGAGTTGACCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: HLANATRLELFWCGAHGGSGHAT*VELTLR Trigger: CCTCAGGGTCAACTCCACCCATGTAGCATGTCCGCT...TCCACCGTGAGCACCACACCAAAACAACTCCAACCTTGTTGCATTGGCAAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR TCA 90 bp | CACTGGGAGAATGCATGTATGCACAGAAACGCTTGCAGGCAAAACATCCACACACCCTGCCTGTCTCCTTaGCACAAACACACCCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: HWENACMHRNACRQNIHTPCLSP*HKHTLR Trigger: CCTTAGGGTGTGTTTGTGTCAAGGAGACAGGCAGGG...TGTGTGGATGTTTTGCCTGCAAGCGTTTCTGTGCATACATGCATTCTCCCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR CAA 90 bp | GGAGAAAATAACTCATCTTGCCAATGCAACAAGGTTGGAGTTGTTTaGGTGTGGTGCTCACGGTGGAAGACTCTGATGCTGGGCTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GENNSSCQCNKVGVV*VWCSRWKTLMLGLP Trigger: GGGCAAGCCCAGCATCAGAGTCTTCCACCGTGAGCACCACACCAAAACAACTCCAACCTTGTTGCATTGGCAAGATGAGTTATTTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR GCA 90 bp | GGTGGATTAGAGCAGAGAGAGCTTCCTGAGGTCAGTGGTGTAGGCTTCCTCCTCCTCCTACACTATATCTaGCTTCATCCAAGGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: GGLEQRELPEVSGVGFLLLLHYI*LHPRKT Trigger: TGTCTTCCTTGGATGAAGGCAGATATAGTGTAGGAG...GAGGAGGAAGCCTACACCACTGACCTCAGGAAGCTCTCTCTGCTCTAATCCACC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR GCA 90 bp | CACTGGGAGAATGCATGTATGCACAGAAACGCTTGCAGGCAAAACATCCACACATCTGAGGAGAAGTGTTaGGCTCAGGCTCCAACCTTC | + |
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Preference number: 2 (lower is better) Translates to: HWENACMHRNACRQNIHTSEEKC*AQAPTF Trigger: GAAGGTTGGAGCCTGAGCGCAACACTTCTCCTCAGA...TGTGTGGATGTTTTGCCTGCAAGCGTTTCTGTGCATACATGCATTCTCCCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CCA 90 bp | ACGGTGGAAGACTCTGATGCTGGGCTTGCCCTTTCTGAGGAGAAGTGTTGCGCTATAATAGTTTCCAAATaGCCTTCCTTCCCTAAGACA | + |
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Preference number: 2 (lower is better) Translates to: TVEDSDAGLALSEEKCCAIIVSK*PSFPKT Trigger: TGTCTTAGGGAAGGAAGGCCATTTGGAAACTATTAT...AGCGCAACACTTCTCCTCAGAAAGGGCAAGCCCAGCATCAGAGTCTTCCACCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CCA 90 bp | ACCTATATTGGCCTCGAACTTGGAGAAAATAACTCATCTTGCCAATGCAACAAGACAGACCGAGATCTCTaGGCACCACTGTGCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: TYIGLELGENNSSCQCNKTDRDL*APLCCV Trigger: CACACAGCACAGTGGTGCCCAGAGATCTCGGTCTGT...CTTGTTGCATTGGCAAGATGAGTTATTTTCTCCAAGTTCGAGGCCAATATAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CCA 90 bp | CACTGGGAGAATGCATGTATGCACAGAAACGCTTGCAGGCAAAACATCCACACATTCCTAGAAGAGGCATaGAGGACCCTCCAAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: HWENACMHRNACRQNIHTFLEEA*RTLQEN Trigger: ATTTTCTTGGAGGGTCCTCCATGCCTCTTCTAGGAA...TGTGTGGATGTTTTGCCTGCAAGCGTTTCTGTGCATACATGCATTCTCCCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR TCA 90 bp | AGAATGCATGTATGCACAGAAACGCTTGCAGGCAAAACATCCACACACATAAAAATGGAAGGCACAAGCTaGACAAGCCAGGGTACACCA | + |
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Preference number: 2 (lower is better) Translates to: RMHVCTETLAGKTSTHIKMEGTS*TSQGTP Trigger: TGGTGTACCCTGGCTTGTTCAGCTTGTGCCTTCCAT...TTTTATGTGTGTGGATGTTTTGCCTGCAAGCGTTTCTGTGCATACATGCATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR GCA 72 bp | ACCGAGGTGGAAGCTGATGCAGGGGCCATGGAGGGGTaGTGCTTACTCTCAGGGCTTCCTCAGCCTGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: TEVEADAGAMEG*CLLSGLPQPAF Trigger: AAAAGCAGGCTGAGGAAGCCCTGAGAGTAAGCAGCACCCCTCCATGGCCCCTGCATCAGCTTCCACCTCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR CCA 72 bp | GGCTCCAACCTTCAGAAAAGCCTGGGCAAGCAACTCTaGACCCTAGGGGCAAGTAACTGCCCTGCCCACGCT | + |
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Preference number: 3 (lower is better) Translates to: GSNLQKSLGKQL*TLGASNCPAHA Trigger: AGCGTGGGCAGGGCAGTTACTTGCCCCTAGGGTCCAGAGTTGCTTGCCCAGGCTTTTCTGAAGGTTGGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CAA 90 bp | TCAGAGAGGATGGCCCGGAATGAAGTCCCAGAGAATGTTCCTAGAAGAGGCATGCTGTGTGGAGGGGACTaGGGGTGCTGTATCTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: SERMARNEVPENVPRRGMLCGGD*GCCIWG Trigger: CCCCCAGATACAGCACCCCAAGTCCCCTCCACACAG...CATGCCTCTTCTAGGAACATTCTCTGGGACTTCATTCCGGGCCATCCTCTCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR TCA 72 bp | GCAGCTGATGGGCTACGTGCACCCTGCCTGTCTCCTTaGCACAAACACACCCTAAGGTCTTTGCCCAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: AADGLRAPCLSP*HKHTLRSLPSL Trigger: CAAGCTGGGCAAAGACCTTAGGGTGTGTTTGTGTCAAGGAGACAGGCAGGGTGCACGTAGCCCATCAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR GCA 72 bp | GTAGTCTACTTCCCCGGCTGTGGAGCACACAGGGAGTaGAGAGGTGTTACTGGGAAGAGTCAGAGAGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: VVYFPGCGAHRE*RGVTGKSQRVR Trigger: CCTCACTCTCTGACTCTTCCCAGTAACACCTCTGCACTCCCTGTGTGCTCCACAGCCGGGGAAGTAGACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR GCA 72 bp | AGCCCGGGAACAGAAGCACTCAGGAGCACTGCCAACTaGACAGGAAGTTGTTTCAGAGAGGATGGCCCGGAA | + |
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Preference number: 3 (lower is better) Translates to: SPGTEALRSTAN*TGSCFREDGPE Trigger: TTCCGGGCCATCCTCTCTGAAACAACTTCCTGTGCAGTTGGCAGTGCTCCTGAGTGCTTCTGTTCCCGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR CCA 72 bp | TTGGAACCAGCCCCTAGTAGTCTACTTCCCCGGCTGTaGAGCACACAGGGAGTGCAGAGGTGTTACTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: LEPAPSSLLPRL*STQGVQRCYWE Trigger: TTCCCAGTAACACCTCTGCACTCCCTGTGTGCTCCACAGCCGGGGAAGTAGACTACTAGGGGCTGGTTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CAA 90 bp | AAACATGCTGCTAGCAGCATCAGTATGTCAAGAAACCAGGCAAGCAGAGGCCTCCTGTGTGGAGGGGACTaGGGGTGCTGTATCTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: KHAASSISMSRNQASRGLLCGGD*GCCIWG Trigger: CCCCCAGATACAGCACCCCAAGTCCCCTCCACACAG...GAGGCCTCTGCTTGCCTGGTTTCTTGACATACTGATGCTGCTAGCAGCATGTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| 3UTR-3UTR CAA 90 bp | CTGTGGAGCACACAGGGAGTGCAGAGGTGTTACTGGGAAGAGTCAGAGAGTGAGAAACAGAAAGCATCCTaGTCCCCGGCACAGACCGAG | + |
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Preference number: 3 (lower is better) Translates to: LWSTQGVQRCYWEESESEKQKAS*SPAQTE Trigger: CTCGGTCTGTGCCGGGGACAAGGATGCTTTCTGTTT...CTCACTCTCTGACTCTTCCCAGTAACACCTCTGCACTCCCTGTGTGCTCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CAA 90 bp | GTACACCATACCTGTCAGCTCAAGGACTTCCAAATCCACCAATCCTGGCTCCCCCACACCCTAAGGTCTTaGCCCAGCTTGGCTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: VHHTCQLKDFQIHQSWLPHTLRS*PSLALP Trigger: AGGCAGAGCCAAGCTGGGCAAAGACCTTAGGGTGTG...GGGGAGCCAGGATTGGTGGATTTGGAAGTCCTTGAGCTGACAGGTATGGTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR-3UTR CAA 90 bp | CTCAAGGACTTCCAAATCCACCAATCCTGGCTCCCCTCTGCAGCTCTTGGGGGTACCCTGCCTGTCTCCTaGACACAAACACACCCTAAG | + |
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Preference number: 3 (lower is better) Translates to: LKDFQIHQSWLPSAALGGTLPVS*TQTHPK Trigger: CTTAGGGTGTGTTTGTGTCAAGGAGACAGGCAGGGT...ACCCCCAAGAGCTGCAGAGGGGAGCCAGGATTGGTGGATTTGGAAGTCCTTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| 3UTR TCA 72 bp | GCTACATGGGTGGAGTTGACCCTGAGGAAAGGCTGCTaGCACCGTGAGACAACACACCAGGAAGAACCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ATWVELTLRKGC*HRETTHQEEPQ Trigger: CTGAGGTTCTTCCTGGTGTGTTGTCTCACGGTGTCAGCAGCCTTTCCTCAGGGTCAACTCCACCCATGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR GCA 72 bp | TCTGATGCTGGGCTTGCCCTTTCTGAGGAGAAGTGTTaGGCTCAGGCTCCAACCTTCAGAAAAGCCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SDAGLALSEEKC*AQAPTFRKAWA Trigger: TGCCCAGGCTTTTCTGAAGGTTGGAGCCTGAGCGCAACACTTCTCCTCAGAAAGGGCAAGCCCAGCATCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR GCA 72 bp | CTGTTCCAGAGGACACAGGTTGGATTCCCAGTACCATaGGCAGGTGGCTCACAGGGCAGTTCACATCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LFQRTQVGFPVP*AGGSQGSSHLS Trigger: AGACAGATGTGAACTGCCCTGTGAGCCACCTGCGCATGGTACTGGGAATCCAACCTGTGTCCTCTGGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR CCA 72 bp | CGGCTGTGGAGCACACAGGGAGTGCAGAGGTGTTACTaGGAAGAGTCAGAGAGTGAGGACAAGGTGGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RLWSTQGVQRCY*EESESEDKVVS Trigger: ACTTACCACCTTGTCCTCACTCTCTGACTCTTCCCAGTAACACCTCTGCACTCCCTGTGTGCTCCACAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR CCA 72 bp | GAGGACACAGGTTGGATTCCCAGTACCATGCGCAGGTaGCTCACAGGGCAGTTCACATCTGTCTGGAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: EDTGWIPSTMRR*LTGQFTSVWNS Trigger: AGAGTTCCAGACAGATGTGAACTGCCCTGTGAGCCACCTGCGCATGGTACTGGGAATCCAACCTGTGTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTCTCATCTCTAGAGAGCGGACATGCTACATGGGTGGAGTTGACCCTGAGGAGGTCTTTGCCCAGCTaGGCTCTGCCTGAATCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AFSSLESGHATWVELTLRRSLPS*ALPESL Trigger: GAGAGATTCAGGCAGAGCCAAGCTGGGCAAAGACCT...CCTCAGGGTCAACTCCACCCATGTAGCATGTCCGCTCTCTAGAGATGAGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR TCA 72 bp | GGTGGAGTTGACCCTGAGGAAAGGCTGCTGACACCGTaGGACAACACACCAGGAAGAACCTCAGTGGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GGVDPEERLLTP*DNTPGRTSVVS Trigger: ACTTACCACTGAGGTTCTTCCTGGTGTGTTGTCTCACGGTGTCAGCAGCCTTTCCTCAGGGTCAACTCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR TCA 72 bp | GCCCTCAGCCTGATCTTACGGAGGCATTTTCCCAACTaGGGATCACGCCTCTCAGAGGACTCTAGTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: ALSLILRRHFPN*GSRLSEDSSSH Trigger: ATGTGAACTAGAGTCCTCTGAGAGGCGTGATCCTCAGTTGGGAAAATGCCTCCGTAAGATCAGGCTGAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR CCA 72 bp | AACAAGGTTGGAGTTGTTTTGGTGTGGTGCTCACGGTaGAAGACTCTGATGCTGGGCTTGCCCTTTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NKVGVVLVWCSR*KTLMLGLPFLR Trigger: CCTCAGAAAGGGCAAGCCCAGCATCAGAGTCTTCCACCGTGAGCACCACACCAAAACAACTCCAACCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR CCA 72 bp | TTAAAAGCACTAACTGCTGTTCCAGAGGACACAGGTTaGATTCCCAGTACCATGCGCAGGTGGCTCACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LKALTAVPEDTG*IPSTMRRWLTG Trigger: CCCTGTGAGCCACCTGCGCATGGTACTGGGAATCCAACCTGTGTCCTCTGGAACAGCAGTTAGTGCTTTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR CCA 72 bp | ATAACATCAGCCACCACAGGGGCCTTGCTTATTCTTTaGTCCTGTCTAGGCTCACCAACAGGGTCTCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: ITSATTGALLIL*SCLGSPTGSHS Trigger: AGAGTGAGACCCTGTTGGTGAGCCTAGACAGGACCAAAGAATAAGCAAGGCCCCTGTGGTGGCTGATGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR-3UTR CAA 90 bp | CACTGGGAGAATGCATGTATGCACAGAAACGCTTGCAGGCAAAACATCCACACACAACTGCACAGGAAGTaGTTTCAGAGAGGATGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: HWENACMHRNACRQNIHTQLHRK*FQRGWP Trigger: GGGCCATCCTCTCTGAAACAACTTCCTGTGCAGTTG...TGTGTGGATGTTTTGCCTGCAAGCGTTTCTGTGCATACATGCATTCTCCCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR TCA 72 bp | GAAGAAAGAAAATGTCCTACAGGCCTGCCCTCAGCCTaGTCTTACGGAGGCATTTTCCCAACTGAGGATCAC | + |
|
Preference number: 3 (lower is better) Translates to: EERKCPTGLPSA*SYGGIFPTEDH Trigger: GTGATCCTCAGTTGGGAAAATGCCTCCGTAAGATCAGGCTGAGGGCAGGCCTGTAGGACATTTTCTTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR GCA 72 bp | AGTCTCAGAGCCAACAAACATGTAGATGATCCAGATTaGTTGGAACCAGCCCCTAGTAGTCTACTTCCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: SLRANKHVDDPD*LEPAPSSLLPR Trigger: CCGGGGAAGTAGACTACTAGGGGCTGGTTCCAAGCAATCTGGATCATCTACATGTTTGTTGGCTCTGAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR GCA 72 bp | GTTAGTTATGGCTTTCTCATCTCTAGAGAGCGGACATaGTACATGGGTGGAGTTGACCCTGAGGAAAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VSYGFLISRERT*YMGGVDPEERL Trigger: CAGCCTTTCCTCAGGGTCAACTCCACCCATGTAGCATGTCCGCTCTCTAGAGATGAGAAAGCCATAACTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR CCA 72 bp | GTAAGTTGGCCAGAACTCCTAGATGCCAGCCTAAATTaGTTTCTACCCAGGAGCTTAACACATCAGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSWPELLDASLN*FLPRSLTHQGW Trigger: CCAGCCCTGATGTGTTAAGCTCCTGGGTAGAAACCAATTTAGGCTGGCATCTAGGAGTTCTGGCCAACTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR-3UTR CAA 90 bp | AAACATGCTGCTAGCAGCATCAGTATGTCAAGAAACCAGGCAAGCAGAGGCCTCAAGCTCCTTTCAACCTaGTCCCAGCCAAACAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KHAASSISMSRNQASRGLKLLST*SQPNRK Trigger: CTTTCTGTTTGGCTGGGACAAGGTTGAAAGGAGCTT...GAGGCCTCTGCTTGCCTGGTTTCTTGACATACTGATGCTGCTAGCAGCATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| 3UTR-3UTR CAA 90 bp | CACTGGGAGAATGCATGTATGCACAGAAACGCTTGCAGGCAAAACATCCACACAAAGAGACTGAAAAGCTaGCTGCAGTTGTCCCCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HWENACMHRNACRQNIHTKRLKS*LQLSPK Trigger: CTTCGGGGACAACTGCAGCAAGCTTTTCAGTCTCTT...TGTGTGGATGTTTTGCCTGCAAGCGTTTCTGTGCATACATGCATTCTCCCAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR-3UTR CAA 90 bp | CATCTTGCCAATGCAACAAGGTTGGAGTTGTTTTGGTGTGGTGCTCACGGTGGAAGATGCCAGCCTAAATaGGTTTCTACCCAGGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HLANATRLELFWCGAHGGRCQPK*VSTQEL Trigger: AAGCTCCTGGGTAGAAACCAATTTAGGCTGGCATCT...TCCACCGTGAGCACCACACCAAAACAACTCCAACCTTGTTGCATTGGCAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR TCA 72 bp | AAGAAAATGAGCAGACTGGAGATGGAAGGCACAAGCTaGACAAGCCAGGGTACACCATACCTGTCAGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KKMSRLEMEGTS*TSQGTPYLSAQ Trigger: TTGAGCTGACAGGTATGGTGTACCCTGGCTTGTTCAGCTTGTGCCTTCCATCTCCAGTCTGCTCATTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAATGTGATGGGAAAACAAAACAGTCAGCAAAGCTCCTTTCAACCTTGTCCAAACAGAAAGCATCCTaGTCCCCGGCACAGACCGAG | + |
|
Preference number: 3 (lower is better) Translates to: CQCDGKTKQSAKLLSTLSKQKAS*SPAQTE Trigger: CTCGGTCTGTGCCGGGGACAAGGATGCTTTCTGTTT...GGACAAGGTTGAAAGGAGCTTTGCTGACTGTTTTGTTTTCCCATCACATTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTCTCATCTCTAGAGAGCGGACATGCTACATGGGTGGAGTTGACCCTGAGGATTACGATGAAGGTTTaGGCCATTATTTCATCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: AFSSLESGHATWVELTLRITMKV*AIISSS Trigger: GCTTGATGAAATAATGGCCAAAACCTTCATCGTAAT...CCTCAGGGTCAACTCCACCCATGTAGCATGTCCGCTCTCTAGAGATGAGAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR GCA 72 bp | AGACACCAGAGGACCCACATCCTCCTACACTATATCTaGCTTCATCCAAGGAAGACACAAGAGACTGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RHQRTHILLHYI*LHPRKTQETEK Trigger: CTTTTCAGTCTCTTGTGTCTTCCTTGGATGAAGGCAGATATAGTGTAGGAGGATGTGGGTCCTCTGGTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR TCA 72 bp | CAAAATCTGCTGGGCCCTCCCTCATCATTCGCTAATTaGTTTTTCCAAGCTGGAGAGATGGCTCAACAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QNLLGPPSSFAN*FFQAGEMAQQL Trigger: TAACTGTTGAGCCATCTCTCCAGCTTGGAAAAATCAATTAGCGAATGATGAGGGAGGGCCCAGCAGATTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR GCA 72 bp | GGCCTCGAACTTGGAGAAAATAACTCATCTTGCCAATaGAACAAGGTTGGAGTTGTTTTGGTGTGGTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GLELGENNSSCQ*NKVGVVLVWCS Trigger: TGAGCACCACACCAAAACAACTCCAACCTTGTTGCATTGGCAAGATGAGTTATTTTCTCCAAGTTCGAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR TCA 72 bp | CTATATCTGCCTTCATCCAAGGAAGACACAAGAGACTaGAAAGCTTGCTGCAGTTGTCCCCGAAGATTATCT | + |
|
Preference number: 3 (lower is better) Translates to: LYLPSSKEDTRD*KACCSCPRRLS Trigger: AGATAATCTTCGGGGACAACTGCAGCAAGCTTTTCAGTCTCTTGTGTCTTCCTTGGATGAAGGCAGATATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| CDS-3UTR GCA 90 bp | CCGAGATCTCTGGGCACCACTGTGCTGTGTGGAGGGGACTTGGGGTGCTGTATCTGCTGCTGCACCTGCTaGGCATTCAGCCACTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRSLGTTVLCGGDLGCCICCCTC*AFSHLR Trigger: CCTCAAGTGGCTGAATGCGCAGCAGGTGCAGCAGCA...GATACAGCACCCCAAGTCCCCTCCACACAGCACAGTGGTGCCCAGAGATCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| CDS-3UTR GCA 90 bp | CTCAAGGACTTCCAAATCCACCAATCCTGGCTCCCCTCTGCAGCTCTTGGGGGTATGGGGCAGTGCTGCTaGACCTGCTGCGCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKDFQIHQSWLPSAALGGMGQCC*TCCAFS Trigger: GCTGAATGCGCAGCAGGTGCAGCAGCACTGCCCCAT...ACCCCCAAGAGCTGCAGAGGGGAGCCAGGATTGGTGGATTTGGAAGTCCTTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| CDS-3UTR GCA 90 bp | GGTGGATTAGAGCAGAGAGAGCTTCCTGAGGTCAGTGGTGTAGGCTTCCTCCTCCGACACATGGGGCAGTaGTGCTGCACCTGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLEQRELPEVSGVGFLLRHMGQ*CCTCCA Trigger: TGCGCAGCAGGTGCAGCAGCACTGCCCCATGTGTCG...GAGGAGGAAGCCTACACCACTGACCTCAGGAAGCTCTCTCTGCTCTAATCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR CAA 72 bp | GTGTGGTGCTCACGGTGGAAGACTCTGATGCTGGGCTaGCCCTTTCTGAGGAGAAGTGTTGCGCTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VWCSRWKTLMLG*PFLRRSVALRL Trigger: GAGCCTGAGCGCAACACTTCTCCTCAGAAAGGGCAAGCCCAGCATCAGAGTCTTCCACCGTGAGCACCACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCTTTCAACCTTGTCCCAGCCAAACAGAAAGCATCCTTGTCCCCGGCACACTCCTGGCGACACATaGGGCAGTGCTGCTGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLSTLSQPNRKHPCPRHTPGDT*GSAAAP Trigger: AGGTGCAGCAGCACTGCCCCATGTGTCGCCAGGAGT...GTGCCGGGGACAAGGATGCTTTCTGTTTGGCTGGGACAAGGTTGAAAGGAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGACTTCCAAATCCACCAATCCTGGCTCCCCTCTGCAGCTCTTGGGGGTTTGAACTTCCACTCCTaGCGACACATGGGGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKDFQIHQSWLPSAALGGLNFHS*RHMGQC Trigger: GCACTGCCCCATGTGTCGCCAGGAGTGGAAGTTCAA...ACCCCCAAGAGCTGCAGAGGGGAGCCAGGATTGGTGGATTTGGAAGTCCTTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR CAA 72 bp | CCTTTCAACCTTGTCCCAGCCAAACAGAAAGCATCCTaGTCCCCGGCACAGACCGAGATCTCTGGGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFNLVPAKQKAS*SPAQTEISGHH Trigger: GTGGTGCCCAGAGATCTCGGTCTGTGCCGGGGACAAGGATGCTTTCTGTTTGGCTGGGACAAGGTTGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| CDS-3UTR GCA 90 bp | CAAAGCTCCTTTCAACCTTGTCCCAGCCAAACAGAAAGCATCCTTGTCCCCGGCTGCTGCTGCACCTGCTaGGCATTCAGCCACTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSFQPCPSQTESILVPGCCCTC*AFSHLR Trigger: CCTCAAGTGGCTGAATGCGCAGCAGGTGCAGCAGCA...GCCGGGGACAAGGATGCTTTCTGTTTGGCTGGGACAAGGTTGAAAGGAGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| CDS-3UTR GCA 90 bp | AAACATGCTGCTAGCAGCATCAGTATGTCAAGAAACCAGGCAAGCAGAGGCCTCCGACACATGGGGCAGTaGTGCTGCACCTGCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KHAASSISMSRNQASRGLRHMGQ*CCTCCA Trigger: TGCGCAGCAGGTGCAGCAGCACTGCCCCATGTGTCG...GAGGCCTCTGCTTGCCTGGTTTCTTGACATACTGATGCTGCTAGCAGCATGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| CDS-3UTR GCA 90 bp | CTGTGGAGCACACAGGGAGTGCAGAGGTGTTACTGGGAAGAGTCAGAGAGTGAGACGCCATCCTGCAGATaGCGCAGTTCTCATCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWSTQGVQRCYWEESESETPSCR*RSSHHW Trigger: CCAATGATGAGAACTGCGGCATCTGCAGGATGGCGT...CTCACTCTCTGACTCTTCCCAGTAACACCTCTGCACTCCCTGTGTGCTCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| CDS-3UTR GCA 90 bp | CATCTTGCCAATGCAACAAGGTTGGAGTTGTTTTGGTGTGGTGCTCACGGTGGACACATGGGGCAGTGCTaGTGCACCTGCTGCGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: HLANATRLELFWCGAHGGHMGQC*CTCCAF Trigger: GAATGCGCAGCAGGTGCAGCAGCACTGCCCCATGTG...TCCACCGTGAGCACCACACCAAAACAACTCCAACCTTGTTGCATTGGCAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGACTTCCAAATCCACCAATCCTGGCTCCCCTCTGCAGCTCTTGGGGGTAGGCACCTTACAGTCTaGACAGCAGCCATTAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: LKDFQIHQSWLPSAALGGRHLTV*TAAIKR Trigger: GCGTTTAATGGCTGCTGTCCAGACTGTAAGGTGCCT...ACCCCCAAGAGCTGCAGAGGGGAGCCAGGATTGGTGGATTTGGAAGTCCTTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| 3UTR CAA 72 bp | AGAAGCACTCAGGAGCACTGCCAACTGCACAGGAAGTaGTTTCAGAGAGGATGGCCCGGAATGAAGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSTQEHCQLHRK*FQRGWPGMKSQ Trigger: CTGGGACTTCATTCCGGGCCATCCTCTCTGAAACAACTTCCTGTGCAGTTGGCAGTGCTCCTGAGTGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| CDS-3UTR GCA 90 bp | AAGCTCCTTTCAACCTTGTCCCAGCCAAACAGAAAGCATCCTTGTCCCCGGCACACGCCATCCTGCAGATaGCGCAGTTCTCATCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLSTLSQPNRKHPCPRHTPSCR*RSSHHW Trigger: CCAATGATGAGAACTGCGGCATCTGCAGGATGGCGT...GTGCCGGGGACAAGGATGCTTTCTGTTTGGCTGGGACAAGGTTGAAAGGAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| CDS-3UTR GCA 90 bp | ACAGTCAGCAAAGCTCCTTTCAACCTTGTCCCAGCCAAACAGAAAGCATCCTTGCACATGGGGCAGTGCTaGTGCACCTGCTGCGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: TVSKAPFNLVPAKQKASLHMGQC*CTCCAF Trigger: GAATGCGCAGCAGGTGCAGCAGCACTGCCCCATGTG...CAAGGATGCTTTCTGTTTGGCTGGGACAAGGTTGAAAGGAGCTTTGCTGACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGATGGAAGGCACAAGCTGAACAAGCCAGGGTACACCATACCTGTCAGCAGGATGCAGTGCATGTaGAAGCAGTGGGAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGDGRHKLNKPGYTIPVSRMQCM*KQWEHC Trigger: ACAGTGCTCCCACTGCTTCCACATGCACTGCATCCT...GCTGACAGGTATGGTGTACCCTGGCTTGTTCAGCTTGTGCCTTCCATCTCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| CDS-3UTR CCA 90 bp | AAGCTCCTTTCAACCTTGTCCCAGCCAAACAGAAAGCATCCTTGTCCCCGGCACAGGATGCAGTGCATGTaGAAGCAGTGGGAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLLSTLSQPNRKHPCPRHRMQCM*KQWEHC Trigger: ACAGTGCTCCCACTGCTTCCACATGCACTGCATCCT...GTGCCGGGGACAAGGATGCTTTCTGTTTGGCTGGGACAAGGTTGAAAGGAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| 3UTR CAA 72 bp | CATAACATCAGCCACCACAGGGGCCTTGCTTATTCTTaGGTCCTGTCTAGGCTCACCAACAGGGTCTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HNISHHRGLAYS*VLSRLTNRVSL Trigger: GAGTGAGACCCTGTTGGTGAGCCTAGACAGGACCAAAGAATAAGCAAGGCCCCTGTGGTGGCTGATGTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| CDS-3UTR TCA 90 bp | TCAGCAAAGCTCCTTTCAACCTTGTCCCAGCCAAACAGAAAGCATCCTTGTCCCGCGCATTCAGCCACTTaGGGATGCAGTGCATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAKLLSTLSQPNRKHPCPAHSAT*GCSACG Trigger: TCCACATGCACTGCATCCTCAAGTGGCTGAATGCGC...GGGACAAGGATGCTTTCTGTTTGGCTGGGACAAGGTTGAAAGGAGCTTTGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGATGGAAGGCACAAGCTGAACAAGCCAGGGTACACCATACCTGTCAGCCTACCCAGAGCCAAGTaGCCACACCATTCCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: TGDGRHKLNKPGYTIPVSLPRAK*PHHSNI Trigger: AATGTTGGAATGGTGTGGCCACTTGGCTCTGGGTAG...GCTGACAGGTATGGTGTACCCTGGCTTGTTCAGCTTGTGCCTTCCATCTCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
||
| CDS-3UTR CCA 90 bp | ACAGTCAGCAAAGCTCCTTTCAACCTTGTCCCAGCCAAACAGAAAGCATCCTTGTGCATGTGGAAGCAGTaGGAGCACTGTCCCCACACG | + |
|
Preference number: 4 (lower is better) Translates to: TVSKAPFNLVPAKQKASLCMWKQ*EHCPHT Trigger: CGTGTGGGGACAGTGCTCCCACTGCTTCCACATGCA...CAAGGATGCTTTCTGTTTGGCTGGGACAAGGTTGAAAGGAGCTTTGCTGACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| CDS-3UTR GCA 90 bp | TGTCAATGTGATGGGAAAACAAAACAGTCAGCAAAGCTCCTTTCAACCTTGTCCATGGGGCAGTGCTGCTaGACCTGCTGCGCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CQCDGKTKQSAKLLSTLSMGQCC*TCCAFS Trigger: GCTGAATGCGCAGCAGGTGCAGCAGCACTGCCCCAT...GGACAAGGTTGAAAGGAGCTTTGCTGACTGTTTTGTTTTCCCATCACATTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
||
| CDS-3UTR TCA 90 bp | GTCAATGTGATGGGAAAACAAAACAGTCAGCAAAGCTCCTTTCAACCTTGTCCCGCGCATTCAGCCACTTaGGGATGCAGTGCATGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNVMGKQNSQQSSFQPCPAHSAT*GCSACG Trigger: TCCACATGCACTGCATCCTCAAGTGGCTGAATGCGC...GGGACAAGGTTGAAAGGAGCTTTGCTGACTGTTTTGTTTTCCCATCACATTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| 3UTR CAA 72 bp | AACTCATCTTGCCAATGCAACAAGGTTGGAGTTGTTTaGGTGTGGTGCTCACGGTGGAAGACTCTGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: NSSCQCNKVGVV*VWCSRWKTLML Trigger: CAGCATCAGAGTCTTCCACCGTGAGCACCACACCAAAACAACTCCAACCTTGTTGCATTGGCAAGATGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| CDS-3UTR GCA 90 bp | TGTCTGAGCTGTGACTCAGATTACGATGAAGGTTTTGGCCATTATTTCATCAAGCAGTGCTGCTGCACCTaGTGCGCATTCAGCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: CLSCDSDYDEGFGHYFIKQCCCT*CAFSHL Trigger: CAAGTGGCTGAATGCGCAGCAGGTGCAGCAGCACTG...CTTGATGAAATAATGGCCAAAACCTTCATCGTAATCTGAGTCACAGCTCAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| CDS-3UTR CCA 90 bp | GTCAATGTGATGGGAAAACAAAACAGTCAGCAAAGCTCCTTTCAACCTTGTCCCCGCAGTTCTCATCATTaGCTACCCAGAGCCAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: VNVMGKQNSQQSSFQPCPRSSHH*LPRAKW Trigger: CCACTTGGCTCTGGGTAGCCAATGATGAGAACTGCG...GGGACAAGGTTGAAAGGAGCTTTGCTGACTGTTTTGTTTTCCCATCACATTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS-3UTR CCA 90 bp | TGTCTGAGCTGTGACTCAGATTACGATGAAGGTTTTGGCCATTATTTCATCAAGTGCATGTGGAAGCAGTaGGAGCACTGTCCCCACACG | + |
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Preference number: 4 (lower is better) Translates to: CLSCDSDYDEGFGHYFIKCMWKQ*EHCPHT Trigger: CGTGTGGGGACAGTGCTCCCACTGCTTCCACATGCA...CTTGATGAAATAATGGCCAAAACCTTCATCGTAATCTGAGTCACAGCTCAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| CDS-3UTR CCA 90 bp | GCTGTGACTCAGATTACGATGAAGGTTTTGGCCATTATTTCATCAAGCTGTTTAACTCCTGGCGACACATaGGGCAGTGCTGCTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: AVTQITMKVLAIISSSCLTPGDT*GSAAAP Trigger: AGGTGCAGCAGCACTGCCCCATGTGTCGCCAGGAGT...TAAACAGCTTGATGAAATAATGGCCAAAACCTTCATCGTAATCTGAGTCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| CDS-3UTR CCA 90 bp | TGTCAATGTGATGGGAAAACAAAACAGTCAGCAAAGCTCCTTTCAACCTTGTCCTTGAACTTCCACTCCTaGCGACACATGGGGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: CQCDGKTKQSAKLLSTLSLNFHS*RHMGQC Trigger: GCACTGCCCCATGTGTCGCCAGGAGTGGAAGTTCAA...GGACAAGGTTGAAAGGAGCTTTGCTGACTGTTTTGTTTTCCCATCACATTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS-3UTR CCA 90 bp | TCCAGCACGGCTCGGAACTGTAATGAGTTTTACTTATTGAATAAAGTGTCAATGCGCAGTTCTCATCATTaGCTACCCAGAGCCAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSTARNCNEFYLLNKVSMRSSHH*LPRAKW Trigger: CCACTTGGCTCTGGGTAGCCAATGATGAGAACTGCG...CATTGACACTTTATTCAATAAGTAAAACTCATTACAGTTCCGAGCCGTGCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS-3UTR CCA 90 bp | TCCAGCACGGCTCGGAACTGTAATGAGTTTTACTTATTGAATAAAGTGTCAATGCTACCCAGAGCCAAGTaGCCACACCATTCCAACATT | + |
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Preference number: 4 (lower is better) Translates to: SSTARNCNEFYLLNKVSMLPRAK*PHHSNI Trigger: AATGTTGGAATGGTGTGGCCACTTGGCTCTGGGTAG...CATTGACACTTTATTCAATAAGTAAAACTCATTACAGTTCCGAGCCGTGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS CCA 90 bp | TGCTGCGCATTCAGCCACTTGAGGATGCAGTGCATGTGGAAGCAGTaGGAGCACTGTCCCCACACGAGGGGGCAGTCATCACCAGGCACC | + |
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Preference number: 5 (lower is better) Translates to: CCAFSHLRMQCMWKQ*EHCPHTRGQSSPGT Trigger: GGTGCCTGGTGATGACTGCCCCCTCGTGTGGGGACAGTGCTCCCACTGCTTCCACATGCACTGCATCCTCAAGTGGCTGAATGCGCAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS GCA 90 bp | AACTTCCACTCCTGGCGACACATGGGGCAGTGCTGCTGCACCTGCTaGGCATTCAGCCACTTGAGGATGCAGTGCATGTGGAAGCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: NFHSWRHMGQCCCTC*AFSHLRMQCMWKQW Trigger: CCACTGCTTCCACATGCACTGCATCCTCAAGTGGCTGAATGCGCAGCAGGTGCAGCAGCACTGCCCCATGTGTCGCCAGGAGTGGAAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS CCA 90 bp | CTGTCCCCACACGAGGGGGCAGTCATCACCAGGCACCTTACAGTCTaGACAGCAGCCATTAAACGCCATCCTGCAGATGCCGCAGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LSPHEGAVITRHLTV*TAAIKRHPADAAVL Trigger: GAGAACTGCGGCATCTGCAGGATGGCGTTTAATGGCTGCTGTCCAGACTGTAAGGTGCCTGGTGATGACTGCCCCCTCGTGTGGGGACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS-3UTR CAA 90 bp | CCGAGATCTCTGGGCACCACTGTGCTGTGTGGAGGGGACTTGGGGTGCTGTATCTGCGCATTCAGCCACTaGAGGATGCAGTGCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: PRSLGTTVLCGGDLGCCICAFSH*RMQCMW Trigger: CCACATGCACTGCATCCTCAAGTGGCTGAATGCGCA...GATACAGCACCCCAAGTCCCCTCCACACAGCACAGTGGTGCCCAGAGATCTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS GCA 90 bp | TTGAACTTCCACTCCTGGCGACACATGGGGCAGTGCTGCTGCACCTaGTGCGCATTCAGCCACTTGAGGATGCAGTGCATGTGGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LNFHSWRHMGQCCCT*CAFSHLRMQCMWKQ Trigger: CTGCTTCCACATGCACTGCATCCTCAAGTGGCTGAATGCGCAGCAGGTGCAGCAGCACTGCCCCATGTGTCGCCAGGAGTGGAAGTTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS GCA 90 bp | CACTCTTTGAACTTCCACTCCTGGCGACACATGGGGCAGTGCTGCTaGACCTGCTGCGCATTCAGCCACTTGAGGATGCAGTGCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: HSLNFHSWRHMGQCC*TCCAFSHLRMQCMW Trigger: CCACATGCACTGCATCCTCAAGTGGCTGAATGCGCAGCAGGTGCAGCAGCACTGCCCCATGTGTCGCCAGGAGTGGAAGTTCAAAGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS-3UTR CAA 90 bp | TCAGAGAGGATGGCCCGGAATGAAGTCCCAGAGAATGTTCCTAGAAGAGGCATGCCGCAGTTCTCATCATaGGCTACCCAGAGCCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: SERMARNEVPENVPRRGMPQFSS*ATQSQV Trigger: CACTTGGCTCTGGGTAGCCAATGATGAGAACTGCGG...CATGCCTCTTCTAGGAACATTCTCTGGGACTTCATTCCGGGCCATCCTCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026128.10 |
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| CDS-3UTR CAA 90 bp | GTCAATGTGATGGGAAAACAAAACAGTCAGCAAAGCTCCTTTCAACCTTGTCCCTGCGCATTCAGCCACTaGAGGATGCAGTGCATGTGG | + |
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Preference number: 5 (lower is better) Translates to: VNVMGKQNSQQSSFQPCPCAFSH*RMQCMW Trigger: CCACATGCACTGCATCCTCAAGTGGCTGAATGCGCA...GGGACAAGGTTGAAAGGAGCTTTGCTGACTGTTTTGTTTTCCCATCACATTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS-3UTR CAA 90 bp | TCCAGCACGGCTCGGAACTGTAATGAGTTTTACTTATTGAATAAAGTGTCAATGCCGCAGTTCTCATCATaGGCTACCCAGAGCCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: SSTARNCNEFYLLNKVSMPQFSS*ATQSQV Trigger: CACTTGGCTCTGGGTAGCCAATGATGAGAACTGCGG...CATTGACACTTTATTCAATAAGTAAAACTCATTACAGTTCCGAGCCGTGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS GCA 72 bp | AACTTCCACTCCTGGCGACACATGGGGCAGTGCTGCTaGACCTGCTGCGCATTCAGCCACTTGAGGATGCAG | + |
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Preference number: 6 (lower is better) Translates to: NFHSWRHMGQCC*TCCAFSHLRMQ Trigger: CTGCATCCTCAAGTGGCTGAATGCGCAGCAGGTGCAGCAGCACTGCCCCATGTGTCGCCAGGAGTGGAAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS GCA 72 bp | TCTTTGAACTTCCACTCCTGGCGACACATGGGGCAGTaGTGCTGCACCTGCTGCGCATTCAGCCACTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SLNFHSWRHMGQ*CCTCCAFSHLR Trigger: CCTCAAGTGGCTGAATGCGCAGCAGGTGCAGCAGCACTGCCCCATGTGTCGCCAGGAGTGGAAGTTCAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS CCA 72 bp | CACGAGGGGGCAGTCATCACCAGGCACCTTACAGTCTaGACAGCAGCCATTAAACGCCATCCTGCAGATGCC | + |
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Preference number: 6 (lower is better) Translates to: HEGAVITRHLTV*TAAIKRHPADA Trigger: GGCATCTGCAGGATGGCGTTTAATGGCTGCTGTCCAGACTGTAAGGTGCCTGGTGATGACTGCCCCCTCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS CAA 72 bp | TTAAACGCCATCCTGCAGATGCCGCAGTTCTCATCATaGGCTACCCAGAGCCAAGTGGCCACACCATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LNAILQMPQFSS*ATQSQVATPFQ Trigger: TTGGAATGGTGTGGCCACTTGGCTCTGGGTAGCCAATGATGAGAACTGCGGCATCTGCAGGATGGCGTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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| CDS CAA 90 bp | CAGCAGCCATTAAACGCCATCCTGCAGATGCCGCAGTTCTCATCATaGGCTACCCAGAGCCAAGTGGCCACACCATTCCAACATTTAATT | + |
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Preference number: 6 (lower is better) Translates to: QQPLNAILQMPQFSS*ATQSQVATPFQHLI Trigger: AATTAAATGTTGGAATGGTGTGGCCACTTGGCTCTGGGTAGCCAATGATGAGAACTGCGGCATCTGCAGGATGGCGTTTAATGGCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026128.10 ENSMUST00000093140.5 |
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