Pregenerated sensors for ANAPC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014355Ensembl transcript IDs: ENSMUST00000014499.10, ENSMUST00000110332.2, ENSMUST00000110333.2
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGACTAGTCAGGGAATCTCCTCTCCCAGGCAGCCAGGCCTTCTCTaGGGAGCTCTGCTGGTAAGTCAATCTGTCCCATTCTGTCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: LTSQGISSPRQPGLL*GALLVSQSVPFCPV Trigger: AACAGGACAGAATGGGACAGATTGACTTACCAGCAGAGCTCCCCAGAGAAGGCCTGGCTGCCTGGGAGAGGAGATTCCCTGACTAGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR TCA 90 bp | CCCACATCATCATGGGTAACAACTCTACACAACTTGCAGGCTGCTTaGCTAGTCAGGGAATCTCCTCTCCCAGGCAGCCAGGCCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: PTSSWVTTLHNLQAA*LVRESPLPGSQAFS Trigger: AGAGAAGGCCTGGCTGCCTGGGAGAGGAGATTCCCTGACTAGTCAAGCAGCCTGCAAGTTGTGTAGAGTTGTTACCCATGATGATGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR TCA 90 bp | ACTCAAAGAAAGAGCAATGGAACAGTAGTCCAAAGGCTGCAGAAGTaGGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: TQRKSNGTVVQRLQK*AGPLRPQKQTETRE Trigger: TTCCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGCAGCCTTTGGACTACTGTTCCATTGCTCTTTCTTTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
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| 3UTR GCA 90 bp | CGCTCCATTGTCTGTCTGCTGGACAGTACCTACACTCAAAGCAGCTaGCCCTTGTGTCTCCATTCCACATGTATCAGAGGTGAAGCAACG | + |
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Preference number: 1 (lower is better) Translates to: RSIVCLLDSTYTQSS*PLCLHSTCIRGEAT Trigger: CGTTGCTTCACCTCTGATACATGTGGAATGGAGACACAAGGGGCAGCTGCTTTGAGTGTAGGTACTGTCCAGCAGACAGACAATGGAGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR GCA 90 bp | AAAGCCCACATCATCATGGGTAACAACTCTACACAACTTGCAGGCTaGTTGACTAGTCAGGGAATCTCCTCTCCCAGGCAGCCAGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: KAHIIMGNNSTQLAG*LTSQGISSPRQPGL Trigger: AAGGCCTGGCTGCCTGGGAGAGGAGATTCCCTGACTAGTCAAGCAGCCTGCAAGTTGTGTAGAGTTGTTACCCATGATGATGTGGGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR TCA 90 bp | GGTGTCCGTCCAGCGGACAAAAAGGCCCATCAATGCTGTTTCCACTaGATTCAGTCCTCTCTTTCAAGTCCTCCCATGGCAGCCATTAAC | + |
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Preference number: 1 (lower is better) Translates to: GVRPADKKAHQCCFH*IQSSLSSPPMAAIN Trigger: GTTAATGGCTGCCATGGGAGGACTTGAAAGAGAGGACTGAATTCAGTGGAAACAGCATTGATGGGCCTTTTTGTCCGCTGGACGGACACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR TCA 90 bp | TCAAAGCAGCTGCCCCTTGTGTCTCCATTCCACATGTATCAGAGGTaGAGCAACGTCCTGGGCAATCAGCCTTCCCTTGTAGTCACAAGT | + |
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Preference number: 1 (lower is better) Translates to: SKQLPLVSPFHMYQR*SNVLGNQPSLVVTS Trigger: ACTTGTGACTACAAGGGAAGGCTGATTGCCCAGGACGTTGCTTCACCTCTGATACATGTGGAATGGAGACACAAGGGGCAGCTGCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR TCA 90 bp | AGCTCTGCCAACGCTAAGACCTTCCAGTTCACATTGAGTTGTTTCTaGTTCTCTTGGACTCAGAATCCATGCAGGCAGCAGCAGACCAGA | + |
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Preference number: 1 (lower is better) Translates to: SSANAKTFQFTLSCF*FSWTQNPCRQQQTR Trigger: TCTGGTCTGCTGCTGCCTGCATGGATTCTGAGTCCAAGAGAATCAGAAACAACTCAATGTGAACTGGAAGGTCTTAGCGTTGGCAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR CCA 90 bp | AGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGAAGATaGCTAAATGGTTCTGAGTTAAGAGACACACTGATCAACACTTTA | + |
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Preference number: 1 (lower is better) Translates to: SRTTQAPEADRDKGR*LNGSELRDTLINTL Trigger: TAAAGTGTTGATCAGTGTGTCTCTTAACTCAGAACCATTTAGCCATCTTCCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
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| 3UTR CCA 90 bp | TACAGTCACACTGGTCTGAGAGAAAGCTGTGAGCACAGGTTGAAATaGAGTGAAAGGAGTGTTGTTCCTGTTACATGGGGCATCATGAGC | + |
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Preference number: 1 (lower is better) Translates to: YSHTGLRESCEHRLK*SERSVVPVTWGIMS Trigger: GCTCATGATGCCCCATGTAACAGGAACAACACTCCTTTCACTCCATTTCAACCTGTGCTCACAGCTTTCTCTCAGACCAGTGTGACTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR TCA 90 bp | ACATGTTCAGAAGCTCTGCCAACGCTAAGACCTTCCAGTTCACATTaGGTTGTTTCTGATTCTCTTGGACTCAGAATCCATGCAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: TCSEALPTLRPSSSH*VVSDSLGLRIHAGS Trigger: GCTGCCTGCATGGATTCTGAGTCCAAGAGAATCAGAAACAACTCAATGTGAACTGGAAGGTCTTAGCGTTGGCAGAGCTTCTGAACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR TCA 90 bp | TTCTTAACACTCCTCTGTGGCGGTAATTCTGTATTTTCAGTATTTTaGGCAGGTGTCATGCACAGCCTGCACAGGCTGCAAACACCAAGT | + |
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Preference number: 1 (lower is better) Translates to: FLTLLCGGNSVFSVF*AGVMHSLHRLQTPS Trigger: ACTTGGTGTTTGCAGCCTGTGCAGGCTGTGCATGACACCTGCTCAAAATACTGAAAATACAGAATTACCGCCACAGAGGAGTGTTAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR GCA 90 bp | GTAATTCTGTATTTTCAGTATTTTGAGCAGGTGTCATGCACAGCCTaGACAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: VILYFQYFEQVSCTA*TGCKHQVPQTSIRS Trigger: ACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTGTGCAGGCTGTGCATGACACCTGCTCAAAATACTGAAAATACAGAATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR CCA 90 bp | GAGCACAGGTTGAAATGGAGTGAAAGGAGTGTTGTTCCTGTTACATaGGGCATCATGAGCTGTCCTGAAACTCAGAATGCAAAAGCACTT | + |
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Preference number: 1 (lower is better) Translates to: EHRLKWSERSVVPVT*GIMSCPETQNAKAL Trigger: AAGTGCTTTTGCATTCTGAGTTTCAGGACAGCTCATGATGCCCCATGTAACAGGAACAACACTCCTTTCACTCCATTTCAACCTGTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR GCA 90 bp | GTCAATGGGAGAAACATCAAGAAAACACACAAAAGCCCATGTGATTaGAAAGGTGCTTGGCTGCTTTCAACATGTTCAGAAGCTCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: VNGRNIKKTHKSPCD*KGAWLLSTCSEALP Trigger: TGGCAGAGCTTCTGAACATGTTGAAAGCAGCCAAGCACCTTTGCAATCACATGGGCTTTTGTGTGTTTTCTTGATGTTTCTCCCATTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR TCA 90 bp | TATGACACGTGGACAGCACCAGCGTTATCTGTCTTATTTTCAACATaGATTTTAAGCACAGTGAGGCGTATGCAACTGAGTTCCATTGGT | + |
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Preference number: 1 (lower is better) Translates to: YDTWTAPALSVLFST*ILSTVRRMQLSSIG Trigger: ACCAATGGAACTCAGTTGCATACGCCTCACTGTGCTTAAAATTCATGTTGAAAATAAGACAGATAACGCTGGTGCTGTCCACGTGTCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR TCA 90 bp | TTCACAATGTGGCTTTTTAAGCCTTGCACTTCTGAGTACAGAACCTaGACCACTAAAGTTATAAGGCTTAAAAACTCAGCCTGTCCATCT | + |
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Preference number: 1 (lower is better) Translates to: FTMWLFKPCTSEYRT*TTKVIRLKNSACPS Trigger: AGATGGACAGGCTGAGTTTTTAAGCCTTATAACTTTAGTGGTTCAGGTTCTGTACTCAGAAGTGCAAGGCTTAAAAAGCCACATTGTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGAGCAGGAACGACTCAAAAAGCAGCTCTATCACCAAAGCCCACATCATCCTCGGGCTCTTCCCTTaGCGTGGTTCCCAGGAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SRSRNDSKSSSITKAHIILGLFP*RGSQEA Trigger: AGCCTCCTGGGAACCACGTCAAGGGAAGAGCCCGAG...GATGATGTGGGCTTTGGTGATAGAGCTGCTTTTTGAGTCGTTCCTGCTCCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR CAA 90 bp | GCCCACATCATCATGGGTAACAACTCTACACAACTTGCAGGCTGCTaGACTAGTCAGGGAATCTCCTCTCCCAGGCAGCCAGGCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: AHIIMGNNSTQLAGC*TSQGISSPRQPGLL Trigger: GAGAAGGCCTGGCTGCCTGGGAGAGGAGATTCCCTGACTAGTCAAGCAGCCTGCAAGTTGTGTAGAGTTGTTACCCATGATGATGTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGCAGGTGTCATGCACAGCCTGCACAGGCTGCAAACACCAAGTACCACAGCTGCCTTCACTTTGCTaGCATCAGGATTCTGTGCCG | + |
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Preference number: 2 (lower is better) Translates to: FEQVSCTACTGCKHQVPQLPSLC*HQDSVP Trigger: CGGCACAGAATCCTGATGGCAGCAAAGTGAAGGCAG...CTGTGGTACTTGGTGTTTGCAGCCTGTGCAGGCTGTGCATGACACCTGCTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR CAA 90 bp | TCTTGGACTCAGAATCCATGCAGGCAGCAGCAGACCAGAGCAGGGTaGGGTGTAGCAGATAGGGTAGAGTCCAGAATGTTGAGAACTATG | + |
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Preference number: 2 (lower is better) Translates to: SWTQNPCRQQQTRAG*GVADRVESRMLRTM Trigger: CATAGTTCTCAACATTCTGGACTCTACCCTATCTGCTACACCCAACCCTGCTCTGGTCTGCTGCTGCCTGCATGGATTCTGAGTCCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR GCA 90 bp | GGGGTCACTTGTAGGAATAGGGGTTTGTGTTGTTCCAGGAGCAGGAACGACTCAGCTCCATTGTCTGTCTaGTGGACAGTACCTACACTC | + |
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Preference number: 2 (lower is better) Translates to: GVTCRNRGLCCSRSRNDSAPLSV*WTVPTL Trigger: GAGTGTAGGTACTGTCCAGCAGACAGACAATGGAGC...TGAGTCGTTCCTGCTCCTGGAACAACACAAACCCCTATTCCTACAAGTGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTCTGCTGGACAGTACCTACACTCAAAGCAGCTGCCCCTTGTGTCTCCATGTTGTTCCTGTTACATaGGGCATCATGAGCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: VCLLDSTYTQSSCPLCLHVVPVT*GIMSCP Trigger: AGGACAGCTCATGATGCCCCATGTAACAGGAACAAC...ATGGAGACACAAGGGGCAGCTGCTTTGAGTGTAGGTACTGTCCAGCAGACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCCTTGACGTGGTTCCCAGGAGGCTGGCTGCTGTGCATGGTAAGACTGGTTTTCAAGTCCTCCCATaGCAGCCATTAACAATTGAG | + |
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Preference number: 2 (lower is better) Translates to: SSLDVVPRRLAAVHGKTGFQVLP*QPLTIE Trigger: CTCAATTGTTAATGGCTGCCATGGGAGGACTTGAAA...ACCAGTCTTACCATGCACAGCAGCCAGCCTCCTGGGAACCACGTCAAGGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTGTCCTTGTTTTAGGTACCCACCCTCCACCTATGAGGTGACCATGACACCAACACAAAAGCCCATGTaGTTGCAAAGGTGCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: FCPCFRYPPSTYEVTMTPTQKPM*LQRCLA Trigger: AGCCAAGCACCTTTGCAATCACATGGGCTTTTGTGT...TGGTGTCATGGTCACCTCATAGGTGGAGGGTGGGTACCTAAAACAAGGACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR GCA 90 bp | GGGGTCACTTGTAGGAATAGGGGTTTGTGTTGTTCCAGGAGCAGGAACGACTCATGGCTTTTTAAGCCTTaGACTTCTGAGTACAGAACC | + |
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Preference number: 2 (lower is better) Translates to: GVTCRNRGLCCSRSRNDSWLFKP*TSEYRT Trigger: GGTTCTGTACTCAGAAGTGCAAGGCTTAAAAAGCCA...TGAGTCGTTCCTGCTCCTGGAACAACACAAACCCCTATTCCTACAAGTGACCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTGTGTTGTTCCAGGAGCAGGAACGACTCAAAAAGCAGCTCTATCACCAAGACGTCAGTACCCTTTaGGGAAAGAATCTGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: GFVLFQEQERLKKQLYHQDVSTL*GKNLST Trigger: TGTGCTCAGATTCTTTCCCCAAAGGGTACTGACGTC...TTGGTGATAGAGCTGCTTTTTGAGTCGTTCCTGCTCCTGGAACAACACAAACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR CAA 90 bp | CTTGTTTACAGTCACACTGGTCTGAGAGAAAGCTGTGAGCACAGGTaGAAATGGAGTGAAAGGAGTGTTGTTCCTGTTACATGGGGCATC | + |
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Preference number: 2 (lower is better) Translates to: LVYSHTGLRESCEHR*KWSERSVVPVTWGI Trigger: GATGCCCCATGTAACAGGAACAACACTCCTTTCACTCCATTTCAACCTGTGCTCACAGCTTTCTCTCAGACCAGTGTGACTGTAAACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTGTCCTTGTTTTAGGTACCCACCCTCCACCTATGAGGTGACCATGACACCAGTTACAAAACAGAAATaGTGCCTTCACTTTGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: FCPCFRYPPSTYEVTMTPVTKQK*CLHFAA Trigger: GGCAGCAAAGTGAAGGCAGCATTTCTGTTTTGTAAC...TGGTGTCATGGTCACCTCATAGGTGGAGGGTGGGTACCTAAAACAAGGACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR GCA 90 bp | CCATACAGTTCCATTTCTACAACCTTGGGAAAGCACTTTGTGACTCTTAAGCTTAGCCACAAATTACCTTaGTGCAGGCAGGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PYSSISTTLGKHFVTLKLSHKLP*CRQAGR Trigger: CCTGCCTGCCTGCCTGCAGCAAGGTAATTTGTGGCT...AAGCTTAAGAGTCACAAAGTGCTTTCCCAAGGTTGTAGAAATGGAACTGTATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCTGGAAGGATGTTTCAAGCAGAAGAAAATTACCATGTAACACTAGCTGCACCAAGGTCAGGGCTTaGGCACAGTCCAGTACTCCA | + |
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Preference number: 2 (lower is better) Translates to: SSWKDVSSRRKLPCNTSCTKVRA*AQSSTP Trigger: TGGAGTACTGGACTGTGCCCAAGCCCTGACCTTGGT...GCAGCTAGTGTTACATGGTAATTTTCTTCTGCTTGAAACATCCTTCCAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR TCA 90 bp | TTCTGTCCTTGTTTTAGGTACCCACCCTCCACCTATGAGGTGACCATGACACCACCTTCCAGTTCACATTaGGTTGTTTCTGATTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: FCPCFRYPPSTYEVTMTPPSSSH*VVSDSL Trigger: AAGAGAATCAGAAACAACTCAATGTGAACTGGAAGG...TGGTGTCATGGTCACCTCATAGGTGGAGGGTGGGTACCTAAAACAAGGACAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR CCA 90 bp | CCATACAGTTCCATTTCTACAACCTTGGGAAAGCACTTTGTGACTCTTAAGCTTCAGTCATTTCTAGGGTaGGTTTCCCTCGGCAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: PYSSISTTLGKHFVTLKLQSFLG*VSLGRG Trigger: ACCTCTGCCGAGGGAAACCCACCCTAGAAATGACTG...AAGCTTAAGAGTCACAAAGTGCTTTCCCAAGGTTGTAGAAATGGAACTGTATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR CCA 90 bp | CCAAGGTCAGGGCTTGGGCACAGTCCAGTACTCCATGCTGAGCAATTCTTCATTGCAACTGAGTTCCATTaGTTACAAAACAGAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: PRSGLGHSPVLHAEQFFIATEFH*LQNRNA Trigger: AGCATTTCTGTTTTGTAACCAATGGAACTCAGTTGC...AATGAAGAATTGCTCAGCATGGAGTACTGGACTGTGCCCAAGCCCTGACCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR CAA 90 bp | CTGTCCCATTCTGTCCTGTTCCCATACAGTTCCATTTCTACAACCTaGGGAAAGCACTTTGTGACTCTTAAGCTTCAGCTTCCTAAGACA | + |
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Preference number: 2 (lower is better) Translates to: LSHSVLFPYSSISTT*GKHFVTLKLQLPKT Trigger: TGTCTTAGGAAGCTGAAGCTTAAGAGTCACAAAGTGCTTTCCCAAGGTTGTAGAAATGGAACTGTATGGGAACAGGACAGAATGGGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTTATCGCTTAATACTCTTTTTCCTCTTCTaGGCAGGACATCGATTCTAC | + |
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Preference number: 2 (lower is better) Translates to: QAANTKYHRQASGVYRLILFFLF*AGHRFY Trigger: GTAGAATCGATGTCCTGCTCAGAAGAGGAAAAAGAG...TATTAAGCGATAAACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR TCA 90 bp | CCATACAGTTCCATTTCTACAACCTTGGGAAAGCACTTTGTGACTCTTAAGCTTACAGTCACACTGGTCTaGGAGAAAGCTGTGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: PYSSISTTLGKHFVTLKLTVTLV*EKAVST Trigger: TGTGCTCACAGCTTTCTCTCAGACCAGTGTGACTGT...AAGCTTAAGAGTCACAAAGTGCTTTCCCAAGGTTGTAGAAATGGAACTGTATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTGTGTTGTTCCAGGAGCAGGAACGACTCAAAAAGCAGCTCTATCACCAATCCATTTTCACAATGTaGCTTTTTAAGCCTTGCACT | + |
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Preference number: 2 (lower is better) Translates to: GFVLFQEQERLKKQLYHQSIFTM*LFKPCT Trigger: AGTGCAAGGCTTAAAAAGCCACATTGTGAAAATGGA...TTGGTGATAGAGCTGCTTTTTGAGTCGTTCCTGCTCCTGGAACAACACAAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTGTGTTGTTCCAGGAGCAGGAACGACTCAAAAAGCAGCTCTATCACCAATCCCACAGCATGGTTTaGAGACTAGTAAATAGTTTA | + |
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Preference number: 2 (lower is better) Translates to: GFVLFQEQERLKKQLYHQSHSMV*RLVNSL Trigger: TAAACTATTTACTAGTCTCCAAACCATGCTGTGGGA...TTGGTGATAGAGCTGCTTTTTGAGTCGTTCCTGCTCCTGGAACAACACAAACCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCTGGAAGGATGTTTCAAGCAGAAGAAAATTACCATGTAACACTAGCTGCGTTTTATACATCATATaGCACGTGGACAGCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: SSWKDVSSRRKLPCNTSCVLYII*HVDSTS Trigger: GCTGGTGCTGTCCACGTGTCATATGATGTATAAAAC...GCAGCTAGTGTTACATGGTAATTTTCTTCTGCTTGAAACATCCTTCCAGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR TCA 90 bp | AAACGCTCCCGGAGAGCACAAAGTCCATTTTCACAATGTGGCTTTTTAAGCCTTTCTGAGTACAGAACCTaGACCACTAAAGTTATAAGG | + |
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Preference number: 2 (lower is better) Translates to: KRSRRAQSPFSQCGFLSLSEYRT*TTKVIR Trigger: CCTTATAACTTTAGTGGTTCAGGTTCTGTACTCAGA...AAGGCTTAAAAAGCCACATTGTGAAAATGGACTTTGTGCTCTCCGGGAGCGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCTGGAAGGATGTTTCAAGCAGAAGAAAATTACCATGTAACACTAGCTGCCAGGTTGAAATGGAGTaGAAGGAGTGTTGTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SSWKDVSSRRKLPCNTSCQVEME*KECCSC Trigger: ACAGGAACAACACTCCTTTCACTCCATTTCAACCTG...GCAGCTAGTGTTACATGGTAATTTTCTTCTGCTTGAAACATCCTTCCAGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR TCA 90 bp | CCATACAGTTCCATTTCTACAACCTTGGGAAAGCACTTTGTGACTCTTAAGCTTGTATTTTCAGTATTTTaGGCAGGTGTCATGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: PYSSISTTLGKHFVTLKLVFSVF*AGVMHS Trigger: GCTGTGCATGACACCTGCTCAAAATACTGAAAATAC...AAGCTTAAGAGTCACAAAGTGCTTTCCCAAGGTTGTAGAAATGGAACTGTATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTTCACAGCTGCAAATATATTATTTATCTTCTTCCCCTTGTCCCACACATGCTAACACCCTTATGTaGCATCAACCCTCTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: LASQLQIYYLSSSPCPTHANTLM*HQPSSR Trigger: TCTAGAAGAGGGTTGATGTCACATAAGGGTGTTAGC...ATGTGTGGGACAAGGGGAAGAAGATAAATAATATATTTGCAGCTGTGAAGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110332.2 |
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| 3UTR-3UTR GCA 90 bp | ACATTACCAAATCCCAACGCAGCAATTTCTATTGGCTTTTTCAGAAACAAGCGGGTTTGTGAGCAGTTGTaGTATGAGTTCTCACATGGT | + |
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Preference number: 2 (lower is better) Translates to: TLPNPNAAISIGFFRNKRVCEQL*YEFSHG Trigger: ACCATGTGAGAACTCATAGCACAACTGCTCACAAAC...CCGCTTGTTTCTGAAAAAGCCAATAGAAATTGCTGCGTTGGGATTTGGTAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR-3UTR TCA 90 bp | CTAAAAGTGAAGGAAAGCACATTTTGCCCTCAAGGTCAGCCACAAATTACCTTGTGTCCATCTATTCTCTaGAGTCCAAAGCAATCAATA | + |
|
Preference number: 2 (lower is better) Translates to: LKVKESTFCPQGQPQITLCPSIL*SPKQSI Trigger: TATTGATTGCTTTGGACTTCAGAGAATAGATGGACA...CAAGGTAATTTGTGGCTGACCTTGAGGGCAAAATGTGCTTTCCTTCACTTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR-3UTR CCA 90 bp | CTTGCTTCACAGCTGCAAATATATTATTTATCTTCTTCCCCTTGTCCCACACATACCACTTCTAACCTCTaGCATTTAGTCACCAAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LASQLQIYYLSSSPCPTHTTSNL*HLVTKE Trigger: CTCTTTGGTGACTAAATGCCAGAGGTTAGAAGTGGT...ATGTGTGGGACAAGGGGAAGAAGATAAATAATATATTTGCAGCTGTGAAGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110332.2 |
||
| 3UTR TCA 72 bp | ACTAGAACACTTCAGGTGTTTCTCGGGCTCTTCCCTTaGCGTGGTTCCCAGGAGGCTGGCTGCTGTGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: TRTLQVFLGLFP*RGSQEAGCCAW Trigger: CCATGCACAGCAGCCAGCCTCCTGGGAACCACGTCAAGGGAAGAGCCCGAGAAACACCTGAAGTGTTCTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR GCA 72 bp | CCTCGATTACCTCCAAAGAGCTGCAGCCTACACAGCTaGACCAAGGTCAGGGCTTGGGCACAGTCCAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: PRLPPKSCSLHS*TKVRAWAQSST Trigger: AGTACTGGACTGTGCCCAAGCCCTGACCTTGGTGCAGCTGTGTAGGCTGCAGCTCTTTGGAGGTAATCGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR GCA 72 bp | CTTCCCTTGACGTGGTTCCCAGGAGGCTGGCTGCTGTaGATGGTAAGACTGGTTCCCACAGCATGGTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPLTWFPGGWLL*MVRLVPTAWFG Trigger: TCCAAACCATGCTGTGGGAACCAGTCTTACCATGCACAGCAGCCAGCCTCCTGGGAACCACGTCAAGGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR TCA 72 bp | TCATGGGTAACAACTCTACACAACTTGCAGGCTGCTTaGCTAGTCAGGGAATCTCCTCTCCCAGGCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SWVTTLHNLQAA*LVRESPLPGSQ Trigger: CTGGCTGCCTGGGAGAGGAGATTCCCTGACTAGTCAAGCAGCCTGCAAGTTGTGTAGAGTTGTTACCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR GCA 72 bp | GTCTGTCTGCTGGACAGTACCTACACTCAAAGCAGCTaGCCCTTGTGTCTCCATTCCACATGTATCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VCLLDSTYTQSS*PLCLHSTCIRG Trigger: ACCTCTGATACATGTGGAATGGAGACACAAGGGGCAGCTGCTTTGAGTGTAGGTACTGTCCAGCAGACAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCTGTCCTTGTTTTAGGTACCCACCCTCCACCTATGAGGTGACCATGACACCAAGACGTCAGTACCCTTaGGGGAAAGAATCTGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: FCPCFRYPPSTYEVTMTPRRQYP*GKESEH Trigger: GTGCTCAGATTCTTTCCCCAAAGGGTACTGACGTCT...TGGTGTCATGGTCACCTCATAGGTGGAGGGTGGGTACCTAAAACAAGGACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR TCA 72 bp | AAGGTCAGGGCTTGGGCACAGTCCAGTACTCCATGCTaGGCAATTCTTCATTCAGTAGAAAACTGCTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KVRAWAQSSTPC*AILHSVENCWQ Trigger: CTGCCAGCAGTTTTCTACTGAATGAAGAATTGCTCAGCATGGAGTACTGGACTGTGCCCAAGCCCTGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR TCA 72 bp | CCAGCGGACAAAAAGGCCCATCAATGCTGTTTCCACTaGATTCAGTCCTCTCTTTCAAGTCCTCCCATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PADKKAHQCCFH*IQSSLSSPPMA Trigger: TGCCATGGGAGGACTTGAAAGAGAGGACTGAATTCAGTGGAAACAGCATTGATGGGCCTTTTTGTCCGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR GCA 72 bp | TATTTTGAGCAGGTGTCATGCACAGCCTGCACAGGCTaGAAACACCAAGTACCACAGACAAGCATCAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: YFEQVSCTACTG*KHQVPQTSIRS Trigger: ACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTGTGCAGGCTGTGCATGACACCTGCTCAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR CCA 72 bp | CAGCTTCCTAAGACACGTGATGCTTATTTAGTGTCTTaGGGCTCCCCTCCCCTTCTTCCTGGAAGGATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: QLPKTRDAYLVS*GSPPLLPGRMF Trigger: AAACATCCTTCCAGGAAGAAGGGGAGGGGAGCCCCAAGACACTAAATAAGCATCACGTGTCTTAGGAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTCACTTGTAGGAATAGGGGTTTGTGTTGTTCCAGGAGCAGGAACGACTCATCCATTTCTACAACCTaGGGAAAGCACTTTGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: GVTCRNRGLCCSRSRNDSSISTT*GKHFVT Trigger: AGTCACAAAGTGCTTTCCCAAGGTTGTAGAAATGGA...TGAGTCGTTCCTGCTCCTGGAACAACACAAACCCCTATTCCTACAAGTGACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR-3UTR CAA 90 bp | GGGGTCACTTGTAGGAATAGGGGTTTGTGTTGTTCCAGGAGCAGGAACGACTCATGTATTTTCAGTATTTaGAGCAGGTGTCATGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: GVTCRNRGLCCSRSRNDSCIFSI*SRCHAQ Trigger: CTGTGCATGACACCTGCTCAAAATACTGAAAATACA...TGAGTCGTTCCTGCTCCTGGAACAACACAAACCCCTATTCCTACAAGTGACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR TCA 72 bp | AAAACACGTGGTCTGCAGCCTCACAAGGCAGAGACTTaGGACATCATTAGCTACAGAGAAAAGCTAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KTRGLQPHKAET*DIISYREKLAA Trigger: AGCTGCTAGCTTTTCTCTGTAGCTAATGATGTCTCAAGTCTCTGCCTTGTGAGGCTGCAGACCACGTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR GCA 72 bp | TATTTTCAGTATTTTGAGCAGGTGTCATGCACAGCCTaGACAGGCTGCAAACACCAAGTACCACAGACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: YFQYFEQVSCTA*TGCKHQVPQTS Trigger: GCTTGTCTGTGGTACTTGGTGTTTGCAGCCTGTGCAGGCTGTGCATGACACCTGCTCAAAATACTGAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR TCA 72 bp | AACGCTAAGACCTTCCAGTTCACATTGAGTTGTTTCTaGTTCTCTTGGACTCAGAATCCATGCAGGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: NAKTFQFTLSCF*FSWTQNPCRQQ Trigger: CTGCTGCCTGCATGGATTCTGAGTCCAAGAGAATCAGAAACAACTCAATGTGAACTGGAAGGTCTTAGCGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR GCA 72 bp | ATTGGTTACAAAACAGAAATGCTGCCTTCACTTTGCTaGCATCAGGATTCTGTGCCGCAGTCATTTCTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: IGYKTEMLPSLC*HQDSVPQSFLG Trigger: CCCTAGAAATGACTGCGGCACAGAATCCTGATGGCAGCAAAGTGAAGGCAGCATTTCTGTTTTGTAACCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR CCA 72 bp | AAAACACACAAAAGCCCATGTGATTGCAAAGGTGCTTaGCTGCTTTCAACATGTTCAGAAGCTCTGCCAACG | + |
|
Preference number: 3 (lower is better) Translates to: KTHKSPCDCKGA*LLSTCSEALPT Trigger: CGTTGGCAGAGCTTCTGAACATGTTGAAAGCAGCCAAGCACCTTTGCAATCACATGGGCTTTTGTGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR TCA 72 bp | GTGAAAGGAGTGTTGTTCCTGTTACATGGGGCATCATaGGCTGTCCTGAAACTCAGAATGCAAAAGCACTTT | + |
|
Preference number: 3 (lower is better) Translates to: VKGVLFLLHGAS*AVLKLRMQKHF Trigger: AAAGTGCTTTTGCATTCTGAGTTTCAGGACAGCTCATGATGCCCCATGTAACAGGAACAACACTCCTTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR TCA 72 bp | GAAGCTCTGCCAACGCTAAGACCTTCCAGTTCACATTaGGTTGTTTCTGATTCTCTTGGACTCAGAATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: EALPTLRPSSSH*VVSDSLGLRIH Trigger: ATGGATTCTGAGTCCAAGAGAATCAGAAACAACTCAATGTGAACTGGAAGGTCTTAGCGTTGGCAGAGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR TCA 72 bp | AGCAGACCGAGACAAGGGAAGATGGCTAAATGGTTCTaGGTTAAGAGACACACTGATCAACACTTTAGACTC | + |
|
Preference number: 3 (lower is better) Translates to: SRPRQGKMAKWF*VKRHTDQHFRL Trigger: GAGTCTAAAGTGTTGATCAGTGTGTCTCTTAACTCAGAACCATTTAGCCATCTTCCCTTGTCTCGGTCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| 3UTR GCA 72 bp | TCCATTGGTTACAAAACAGAAATGCTGCCTTCACTTTaGTGCCATCAGGATTCTGTGCCGCAGTCATTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SIGYKTEMLPSL*CHQDSVPQSFL Trigger: TAGAAATGACTGCGGCACAGAATCCTGATGGCAGCAAAGTGAAGGCAGCATTTCTGTTTTGTAACCAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR GCA 72 bp | GTAATTCTGTATTTTCAGTATTTTGAGCAGGTGTCATaGACAGCCTGCACAGGCTGCAAACACCAAGTACCA | + |
|
Preference number: 3 (lower is better) Translates to: VILYFQYFEQVS*TACTGCKHQVP Trigger: TGGTACTTGGTGTTTGCAGCCTGTGCAGGCTGTGCATGACACCTGCTCAAAATACTGAAAATACAGAATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR GCA 72 bp | GCAATCCCTAATCTAAAAGTGAAGGAAAGCACATTTTaGCCTCAAGGTCAGCCACAAATTACCTTGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AIPNLKVKESTF*PQGQPQITLLQ Trigger: CTGCAGCAAGGTAATTTGTGGCTGACCTTGAGGGCAAAATGTGCTTTCCTTCACTTTTAGATTAGGGATTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR CCA 72 bp | TTGAAATGGAGTGAAAGGAGTGTTGTTCCTGTTACATaGGGCATCATGAGCTGTCCTGAAACTCAGAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: LKWSERSVVPVT*GIMSCPETQNA Trigger: TGCATTCTGAGTTTCAGGACAGCTCATGATGCCCCATGTAACAGGAACAACACTCCTTTCACTCCATTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR TCA 72 bp | ACAGTTCCATTTCTACAACCTTGGGAAAGCACTTTGTaGCTCTTAAGCTTCAGCTTCCTAAGACACGTGATG | + |
|
Preference number: 3 (lower is better) Translates to: TVPFLQPWESTL*LLSFSFLRHVM Trigger: CATCACGTGTCTTAGGAAGCTGAAGCTTAAGAGTCACAAAGTGCTTTCCCAAGGTTGTAGAAATGGAACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR CCA 72 bp | TTTAAGCACAGTGAGGCGTATGCAACTGAGTTCCATTaGTTACAAAACAGAAATGCTGCCTTCACTTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FKHSEAYATEFH*LQNRNAAFTLL Trigger: CAGCAAAGTGAAGGCAGCATTTCTGTTTTGTAACCAATGGAACTCAGTTGCATACGCCTCACTGTGCTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR GCA 72 bp | CCTCACAAGGGAATCTTCTTAGTTTGTGAGCAGTTGTaGTATGAGTTCTCACATGGTACAGAGAGAAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: PHKGIFLVCEQL*YEFSHGTERKS Trigger: TGATTTTCTCTCTGTACCATGTGAGAACTCATAGCACAACTGCTCACAAACTAAGAAGATTCCCTTGTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR-3UTR CAA 90 bp | TTAATTGCAATCCCTAATCTAAAAGTGAAGGAAAGCACATTTTGCCCTCAAGGTAATGCTGCCTTCACTTaGCTGCCATCAGGATTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LIAIPNLKVKESTFCPQGNAAFT*LPSGFC Trigger: ACAGAATCCTGATGGCAGCAAAGTGAAGGCAGCATT...ACCTTGAGGGCAAAATGTGCTTTCCTTCACTTTTAGATTAGGGATTGCAATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR TCA 72 bp | TGGCTTTTTAAGCCTTGCACTTCTGAGTACAGAACCTaGACCACTAAAGTTATAAGGCTTAAAAACTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WLFKPCTSEYRT*TTKVIRLKNSA Trigger: GGCTGAGTTTTTAAGCCTTATAACTTTAGTGGTTCAGGTTCTGTACTCAGAAGTGCAAGGCTTAAAAAGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR GCA 72 bp | TTAAAGTACTCAACTCTCATTACAAGTTACACAGCATaGCTATGTAGGCAGCACCATATTTCAGCACTGACT | + |
|
Preference number: 3 (lower is better) Translates to: LKYSTLITSYTA*LCRQHHISALT Trigger: AGTCAGTGCTGAAATATGGTGCTGCCTACATAGGCATGCTGTGTAACTTGTAATGAGAGTTGAGTACTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110332.2 |
||
| 3UTR TCA 72 bp | CAAAATAGAAAGTACTACTATGCTAACACCCTTATGTaGCATCAACCCTCTTCTAGAAACATGTGTTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QNRKYYYANTLM*HQPSSRNMCCR Trigger: CCTGCAACACATGTTTCTAGAAGAGGGTTGATGTCACATAAGGGTGTTAGCATAGTAGTACTTTCTATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110332.2 |
||
| CDS-3UTR GCA 90 bp | GCAGAAGTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGAAGAGCACCAGGTTCCCGTTaGCTTCTAGGACCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: AEVSRTTQAPEADRDKGRAPGSR*LLGPAW Trigger: CCATGCTGGTCCTAGAAGGCAACGGGAACCTGGTGC...TCTTCCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CCA 90 bp | CCCTTGACGTGGTTCCCAGGAGGCTGGCTGCTGTGCATGGTAAGACTGGTTCCCTACAGTTGTGTTTCGTaGAGGGGCTCGCCCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLTWFPGGWLLCMVRLVPYSCVS*RGSPCQ Trigger: CTGACAGGGCGAGCCCCTCCACGAAACACAACTGTA...GGGAACCAGTCTTACCATGCACAGCAGCCAGCCTCCTGGGAACCACGTCAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | TGCAGAAGTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGAAGGCCCCTGAGAAAGAGTaGACACCTAAGGCAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CRSEQDHSGPRSRPRQGKAPEKE*TPKAGE Trigger: CTCTCCTGCCTTAGGTGTGCACTCTTTCTCAGGGGC...CTTCCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGAAGTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGAAGCACCACAATGCCTGCTaGACAGTGCTGTCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CRSEQDHSGPRSRPRQGKHHNAC*TVLSTV Trigger: CACAGTGGACAGCACTGTCCAGCAGGCATTGTGGTG...CTTCCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGCAGAAGTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGGAAAGGTTGAATCTTTaGGCCCCTGAGAAAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCRSEQDHSGPRSRPRQGERLNL*APEKEC Trigger: GCACTCTTTCTCAGGGGCGCAAAGATTCAACCTTTC...CCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGAAGAGCCGAGGCATCATGTTaGACATTGTCAGGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AEVSRTTQAPEADRDKGRAEASC*TLSGKE Trigger: CTCCTTCCCTGACAATGTCCAACATGATGCCTCGGC...TCTTCCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| 3UTR CAA 72 bp | GAGCTGCAGCCTACACAGCTGCACCAAGGTCAGGGCTaGGGCACAGTCCAGTACTCCATGCTGAGCAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELQPTQLHQGQG*GTVQYSMLSNS Trigger: AGAATTGCTCAGCATGGAGTACTGGACTGTGCCCAAGCCCTGACCTTGGTGCAGCTGTGTAGGCTGCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | TGCAGAAGTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGAAGTGCAGGGTCCCTGCCTaGTCAGGGAACTTTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CRSEQDHSGPRSRPRQGKCRVPA*SGNFKT Trigger: TGTTTTAAAGTTCCCTGAGCAGGCAGGGACCCTGCA...CTTCCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CCA 90 bp | GTCTGTCTGCTGGACAGTACCTACACTCAAAGCAGCTGCCCCTTGTGTCTCCATCATGACCATCGGCTGTaGGTTCCCAAGCAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VCLLDSTYTQSSCPLCLHHDHRL*VPKQHR Trigger: CCTGTGCTGCTTGGGAACCCACAGCCGATGGTCATG...ATGGAGACACAAGGGGCAGCTGCTTTGAGTGTAGGTACTGTCCAGCAGACAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | GTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGAAGATGGCTAGTCTCAGTCCATAAGTaGTCAATGCACAGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSRTTQAPEADRDKGRWLVSVHK*SMHSSG Trigger: TCCTGAGCTGTGCATTGATCACTTATGGACTGAGAC...TAGCCATCTTCCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| 3UTR CAA 72 bp | CAGAATCCATGCAGGCAGCAGCAGACCAGAGCAGGGTaGGGTGTAGCAGATAGGGTAGAGTCCAGAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QNPCRQQQTRAG*GVADRVESRML Trigger: CAACATTCTGGACTCTACCCTATCTGCTACACCCAACCCTGCTCTGGTCTGCTGCTGCCTGCATGGATTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | GAGCAATGGAACAGTAGTCCAAAGGCTGCAGAAGTGAGCAGGACCACTCAGGCCTGTGGCTTGAAAGGTTaGATCTTTGCGCCCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQWNSSPKAAEVSRTTQACGLKG*IFAPLR Trigger: TCTCAGGGGCGCAAAGATTCAACCTTTCAAGCCACA...GGCCTGAGTGGTCCTGCTCACTTCTGCAGCCTTTGGACTACTGTTCCATTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGGTCAGGGCTTGGGCACAGTCCAGTACTCCATGCTGAGCAATTCTTCATTTCAGACCCAGGGCCATaGGAAAGCCGGCATACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRSGLGHSPVLHAEQFFISDPGP*ESRHTH Trigger: ATGAGTATGCCGGCTTTCTCATGGCCCTGGGTCTGA...AATGAAGAATTGCTCAGCATGGAGTACTGGACTGTGCCCAAGCCCTGACCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | GGCTGCAGAAGTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGATGAGAGCACAGATTTaGCTCTGGGTAAATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCRSEQDHSGPRSRPRQGMRAQI*LWVNFL Trigger: AAGGAAATTTACCCAGAGGCAAATCTGTGCTCTCAT...CCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR GCA 90 bp | GTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGAAGATGGCTAAACCTGTTTTCTTCTTaGTCTGCTTGTGGCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRTTQAPEADRDKGRWLNLFSS*SACGFW Trigger: CCAAAAGCCACAAGCAGAGCAAGAAGAAAACAGGTT...TAGCCATCTTCCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR GCA 90 bp | CTAAAAGTGAAGGAAAGCACATTTTGCCCTCAAGGTCAGCCACAAATTACCTTGGCCCCAAGCAAACCATaGCCAGGGCCAGGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKVKESTFCPQGQPQITLAPSKP*PGPGQQ Trigger: CTGCTGGCCTGGCCCTGGGCATGGTTTGCTTGGGGC...CAAGGTAATTTGTGGCTGACCTTGAGGGCAAAATGTGCTTTCCTTCACTTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | TCTTCCCTTGACGTGGTTCCCAGGAGGCTGGCTGCTGTGCATGGTAAGACTGGTACATGCCAATCAAATTaGTGCCATGCCCCAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLDVVPRRLAAVHGKTGTCQSN*CHAPSK Trigger: TTTGCTTGGGGCATGGCAGCAATTTGATTGGCATGT...ACCAGTCTTACCATGCACAGCAGCCAGCCTCCTGGGAACCACGTCAAGGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR GCA 90 bp | CCCTTGACGTGGTTCCCAGGAGGCTGGCTGCTGTGCATGGTAAGACTGGTTCCCAGAATAGACCTCAAGTaGTGTTCTCCCTTGCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PLTWFPGGWLLCMVRLVPRIDLK*CSPLLK Trigger: TTTAAGCAAGGGAGAACAGCACTTGAGGTCTATTCT...GGGAACCAGTCTTACCATGCACAGCAGCCAGCCTCCTGGGAACCACGTCAAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CCA 90 bp | GCACAGCCTGCACAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTTACACTGCCAGTGCCTaGCTTTTACTCCCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQPAQAANTKYHRQASGVYTASA*LLLPLL Trigger: GAGCAAAGGGAGTAAAAGCCAGGCACTGGCAGTGTA...AACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTGTGCAGGCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGCACATTTTGCCCTCAAGGTCAGCCACAAATTACCTTGCTGCAGGCAGCACCACAATGCCTGCTaGACAGTGCTGTCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKAHFALKVSHKLPCCRQHHNAC*TVLSTV Trigger: CACAGTGGACAGCACTGTCCAGCAGGCATTGTGGTG...CTGCCTGCAGCAAGGTAATTTGTGGCTGACCTTGAGGGCAAAATGTGCTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR CCA 90 bp | TTCTGTCCTTGTTTTAGGTACCCACCCTCCACCTATGAGGTGACCATGACACCAGTGGGCTGGGAAATGTaGGTAAAGGGCGCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FCPCFRYPPSTYEVTMTPVGWEM*VKGAEK Trigger: CTTCTCTGCGCCCTTTACCCACATTTCCCAGCCCAC...TGGTGTCATGGTCACCTCATAGGTGGAGGGTGGGTACCTAAAACAAGGACAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | GTCTGTCTGCTGGACAGTACCTACACTCAAAGCAGCTGCCCCTTGTGTCTCCATAAATTGTTTCAGGCTTaGAAGCCCGGGCTTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VCLLDSTYTQSSCPLCLHKLFQA*KPGLQS Trigger: ACTCTGAAGCCCGGGCTTTCAAGCCTGAAACAATTT...ATGGAGACACAAGGGGCAGCTGCTTTGAGTGTAGGTACTGTCCAGCAGACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | ACAAAACAGAAATGCTGCCTTCACTTTGCTGCCATCAGGATTCTGTGCCGCAGTGGAGCTGCTAGTAGTTaGATTCTGCAGGGTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKQKCCLHFAAIRILCRSGAASS*ILQGPC Trigger: GCAGGGACCCTGCAGAATGCAACTACTAGCAGCTCC...ACTGCGGCACAGAATCCTGATGGCAGCAAAGTGAAGGCAGCATTTCTGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR CAA 72 bp | CTGCTGGACAGTACCTACACTCAAAGCAGCTGCCCCTaGTGTCTCCATTCCACATGTATCAGAGGTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLDSTYTQSSCP*CLHSTCIRGEA Trigger: TGCTTCACCTCTGATACATGTGGAATGGAGACACAAGGGGCAGCTGCTTTGAGTGTAGGTACTGTCCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | TCCAGGAGCAGGAACGACTCAAAAAGCAGCTCTATCACCAAAGCCCACATCATCCTGCCACTCGGAGAGTaGGAAATGCTGTGTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRSRNDSKSSSITKAHIILPLGE*EMLCLF Trigger: AAAGAGACACAGCATTTCTCACTCTCCGAGTGGCAG...GATGATGTGGGCTTTGGTGATAGAGCTGCTTTTTGAGTCGTTCCTGCTCCTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | GGGGTCACTTGTAGGAATAGGGGTTTGTGTTGTTCCAGGAGCAGGAACGACTCAGTCTCAGTCCATAAGTaGTCAATGCACAGCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVTCRNRGLCCSRSRNDSVSVHK*SMHSSG Trigger: TCCTGAGCTGTGCATTGATCACTTATGGACTGAGAC...TGAGTCGTTCCTGCTCCTGGAACAACACAAACCCCTATTCCTACAAGTGACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | ACAAGTGCCACTTTTGATACTAGAACACTTCAGGTGTTTCTCGGGCTCTTCCCTAAGAGAGCAGGAACGTaGATGCTGAGGAGCCGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSATFDTRTLQVFLGLFPKRAGT*MLRSRV Trigger: TACCCGGCTCCTCAGCATTCACGTTCCTGCTCTCTT...AGGGAAGAGCCCGAGAAACACCTGAAGTGTTCTAGTATCAAAAGTGGCACTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | GCACAGCCTGCACAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTAGAGCTGTCCTGCCCTaGGCTTTACATATAAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: AQPAQAANTKYHRQASGVRAVLP*ALHIKL Trigger: GAGTTTTATATGTAAAGCTCAGGGCAGGACAGCTCT...AACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTGTGCAGGCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGCACATTTTGCCCTCAAGGTCAGCCACAAATTACCTTGCTGCAGGCAGTGCAGGGTCCCTGCCTaGTCAGGGAACTTTAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RKAHFALKVSHKLPCCRQCRVPA*SGNFKT Trigger: TGTTTTAAAGTTCCCTGAGCAGGCAGGGACCCTGCA...CTGCCTGCAGCAAGGTAATTTGTGGCTGACCTTGAGGGCAAAATGTGCTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CCA 90 bp | CCAAGGTCAGGGCTTGGGCACAGTCCAGTACTCCATGCTGAGCAATTCTTCATTTTTACTCAGAGGCTTTaGAGTACCAACACCGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRSGLGHSPVLHAEQFFIFTQRL*STNTVE Trigger: CTCGACGGTGTTGGTACTCCAAAGCCTCTGAGTAAA...AATGAAGAATTGCTCAGCATGGAGTACTGGACTGTGCCCAAGCCCTGACCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CCA 90 bp | GAGCAATGGAACAGTAGTCCAAAGGCTGCAGAAGTGAGCAGGACCACTCAGGCCTCTTCAATGAACTCATaGTCACTGAGTTCTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EQWNSSPKAAEVSRTTQASSMNS*SLSSGY Trigger: GTACCCAGAACTCAGTGACCATGAGTTCATTGAAGA...GGCCTGAGTGGTCCTGCTCACTTCTGCAGCCTTTGGACTACTGTTCCATTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
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| CDS-3UTR CCA 90 bp | CCTGCACAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTTATCGCTGCTGCCTATCCTGGTaGCTTCGGGAACTGAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAQAANTKYHRQASGVYRCCLSW*LRELKN Trigger: ATTTTTCAGTTCCCGAAGCCACCAGGATAGGCAGCA...GCGATAAACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTGTGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | AGAAGAAAGTGGGACACTCAAAGAAAGAGCAATGGAACAGTAGTCCAAAGGCTGTCAGACCCAGGGCCATaGGAAAGCCGGCATACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRKWDTQRKSNGTVVQRLSDPGP*ESRHTH Trigger: ATGAGTATGCCGGCTTTCTCATGGCCCTGGGTCTGA...CAGCCTTTGGACTACTGTTCCATTGCTCTTTCTTTGAGTGTCCCACTTTCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR GCA 90 bp | CCAAATCCCAACGCAGCAATTTCTATTGGCTTTTTCAGAAACAAGCGGGAAGTTGCACCAGGTTCCCGTTaGCTTCTAGGACCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PNPNAAISIGFFRNKREVAPGSR*LLGPAW Trigger: CCATGCTGGTCCTAGAAGGCAACGGGAACCTGGTGC...AACTTCCCGCTTGTTTCTGAAAAAGCCAATAGAAATTGCTGCGTTGGGATTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR CCA 90 bp | CCAAGGTCAGGGCTTGGGCACAGTCCAGTACTCCATGCTGAGCAATTCTTCATTTCTGCTTGTGGCTTTTaGGGAGTTGAGGTTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRSGLGHSPVLHAEQFFISACGF*GVEVTL Trigger: CAAAGTAACCTCAACTCCCCAAAAGCCACAAGCAGA...AATGAAGAATTGCTCAGCATGGAGTACTGGACTGTGCCCAAGCCCTGACCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CCA 90 bp | TTTGAGCAGGTGTCATGCACAGCCTGCACAGGCTGCAAACACCAAGTACCACAGGCACAGATTTGCCTCTaGGTAAATTTCCTTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: FEQVSCTACTGCKHQVPQAQICL*VNFLHK Trigger: CTTGTGAAGGAAATTTACCCAGAGGCAAATCTGTGC...CTGTGGTACTTGGTGTTTGCAGCCTGTGCAGGCTGTGCATGACACCTGCTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| 3UTR CAA 72 bp | GACCTTCCAGTTCACATTGAGTTGTTTCTGATTCTCTaGGACTCAGAATCCATGCAGGCAGCAGCAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLPVHIELFLIL*DSESMQAAADQ Trigger: CTGGTCTGCTGCTGCCTGCATGGATTCTGAGTCCAAGAGAATCAGAAACAACTCAATGTGAACTGGAAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | TTTGAGCAGGTGTCATGCACAGCCTGCACAGGCTGCAAACACCAAGTACCACAGGATTTGTTCAAAAGATaGGACTCAACATTGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FEQVSCTACTGCKHQVPQDLFKR*DSTLRW Trigger: CCATCGCAATGTTGAGTCTCATCTTTTGAACAAATC...CTGTGGTACTTGGTGTTTGCAGCCTGTGCAGGCTGTGCATGACACCTGCTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR TCA 90 bp | AAACGCTCCCGGAGAGCACAAAGTCCATTTTCACAATGTGGCTTTTTAAGCCTTGCCAGCATGTTTAGCTaGGACTTCTCAACAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRSRRAQSPFSQCGFLSLASMFS*DFSTGC Trigger: GCAGCCTGTTGAGAAGTCTCAGCTAAACATGCTGGC...AAGGCTTAAAAAGCCACATTGTGAAAATGGACTTTGTGCTCTCCGGGAGCGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR GCA 90 bp | GTCTGTCTGCTGGACAGTACCTACACTCAAAGCAGCTGCCCCTTGTGTCTCCATTTCCCGTCTATGCTATaGATGTTCATACATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: VCLLDSTYTQSSCPLCLHFPSML*MFIHEL Trigger: GAGTTCATGTATGAACATGCATAGCATAGACGGGAA...ATGGAGACACAAGGGGCAGCTGCTTTGAGTGTAGGTACTGTCCAGCAGACAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR GCA 90 bp | AGTAGTCCAAAGGCTGCAGAAGTGAGCAGGACCACTCAGGCCCCAGAAGCAGACAAACACAATTTTCACTaGTGGATCTACAACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSPKAAEVSRTTQAPEADKHNFH*WIYNIL Trigger: CAGTATGTTGTAGATCCAGCAGTGAAAATTGTGTTT...GTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGCAGCCTTTGGACTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
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| CDS-3UTR GCA 90 bp | GCGGTAATTCTGTATTTTCAGTATTTTGAGCAGGTGTCATGCACAGCCTGCACACTAGTAGTTGCATTCTaGAGGGTCCCTGCCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVILYFQYFEQVSCTACTLVVAF*RVPACS Trigger: TGAGCAGGCAGGGACCCTGCAGAATGCAACTACTAG...TGTGCAGGCTGTGCATGACACCTGCTCAAAATACTGAAAATACAGAATTACCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR GCA 90 bp | CTAAAAGTGAAGGAAAGCACATTTTGCCCTCAAGGTCAGCCACAAATTACCTTGGCCCCTGAGAAAGAGTaGACACCTAAGGCAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKVKESTFCPQGQPQITLAPEKE*TPKAGE Trigger: CTCTCCTGCCTTAGGTGTGCACTCTTTCTCAGGGGC...CAAGGTAATTTGTGGCTGACCTTGAGGGCAAAATGTGCTTTCCTTCACTTTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR CCA 90 bp | GAGCAATGGAACAGTAGTCCAAAGGCTGCAGAAGTGAGCAGGACCACTCAGGCCGAGTTGAGGTTACTTTaGATAAGTACTGGCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EQWNSSPKAAEVSRTTQAELRLL*ISTGKF Trigger: AAACTTGCCAGTACTTATCCAAAGTAACCTCAACTC...GGCCTGAGTGGTCCTGCTCACTTCTGCAGCCTTTGGACTACTGTTCCATTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTTATCGCTTAATACTGTGCATTCCAGTTTaGAATCGCCTATGGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAANTKYHRQASGVYRLILCIPV*NRLWPP Trigger: TGGAGGCCATAGGCGATTTCAAACTGGAATGCACAG...TATTAAGCGATAAACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR GCA 90 bp | TTAAGAGACACACTGATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACGGAGCTGCTAGTAGTTaGATTCTGCAGGGTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRDTLINTLDSVSCYERNGAASS*ILQGPC Trigger: GCAGGGACCCTGCAGAATGCAACTACTAGCAGCTCC...GTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGATCAGTGTGTCTCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
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| CDS-3UTR GCA 90 bp | AGGAAAGCACATTTTGCCCTCAAGGTCAGCCACAAATTACCTTGCTGCAGGCAGGAAACGGAAGCAGAATaGCGGAAAGTAAACCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKAHFALKVSHKLPCCRQETEAE*RKVNLF Trigger: AAACAGGTTTACTTTCCGGCATTCTGCTTCCGTTTC...CTGCCTGCAGCAAGGTAATTTGTGGCTGACCTTGAGGGCAAAATGTGCTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR CCA 90 bp | AGAAGAAAGTGGGACACTCAAAGAAAGAGCAATGGAACAGTAGTCCAAAGGCTGTACACTGCCAGTGCCTaGCTTTTACTCCCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRKWDTQRKSNGTVVQRLYTASA*LLLPLL Trigger: GAGCAAAGGGAGTAAAAGCCAGGCACTGGCAGTGTA...CAGCCTTTGGACTACTGTTCCATTGCTCTTTCTTTGAGTGTCCCACTTTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTTTTTCCTCTTCTGAGCAGGACATCGATTCTACCAAATAGACTCCCCCTTAGCATTCTCTTCCTCTaGCTTTACCCTCCGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLFPLLSRTSILPNRLPLSILFL*LYPPQS Trigger: ACTCTGCGGAGGGTAAAGCCAGAGGAAGAGAATGCT...AAGGGGGAGTCTATTTGGTAGAATCGATGTCCTGCTCAGAAGAGGAAAAAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR CCA 90 bp | CTAAAAGTGAAGGAAAGCACATTTTGCCCTCAAGGTCAGCCACAAATTACCTTGGCCGAGGCATCATGTTaGACATTGTCAGGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKVKESTFCPQGQPQITLAEASC*TLSGKE Trigger: CTCCTTCCCTGACAATGTCCAACATGATGCCTCGGC...CAAGGTAATTTGTGGCTGACCTTGAGGGCAAAATGTGCTTTCCTTCACTTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CCA 90 bp | GCTGCCTTCACTTTGCTGCCATCAGGATTCTGTGCCGCAGTCATTTCTAGGGTGGAGTTGAGGTTACTTTaGATAAGTACTGGCAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAFTLLPSGFCAAVISRVELRLL*ISTGKF Trigger: AAACTTGCCAGTACTTATCCAAAGTAACCTCAACTC...CACCCTAGAAATGACTGCGGCACAGAATCCTGATGGCAGCAAAGTGAAGGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR CCA 90 bp | ACACTGATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACACAGTTAGATACAGTTGTGTTTCGTaGAGGGGCTCGCCCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLINTLDSVSCYERNTVRYSCVS*RGSPCQ Trigger: CTGACAGGGCGAGCCCCTCCACGAAACACAACTGTA...TCTAACTGTGTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGATCAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
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| CDS-3UTR TCA 90 bp | TCCAGGAGCAGGAACGACTCAAAAAGCAGCTCTATCACCAAAGCCCACATCATCCAAACATTTGCCACCTaGAAAGGTAAGGAAGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: SRSRNDSKSSSITKAHIIQTFAT*KGKEAI Trigger: TATAGCTTCCTTACCTTTTCAGGTGGCAAATGTTTG...GATGATGTGGGCTTTGGTGATAGAGCTGCTTTTTGAGTCGTTCCTGCTCCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR TCA 90 bp | CCTGCACAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTTATCGCAAGATCAGATGTGTCTaGCATGTCTCTCTTTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PAQAANTKYHRQASGVYRKIRCV*HVSLFK Trigger: CTTAAAAAGAGAGACATGTCAGACACATCTGATCTT...GCGATAAACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTGTGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | ACATTACCAAATCCCAACGCAGCAATTTCTATTGGCTTTTTCAGAAACAAGCGGTCACACCACAATGCCTaGTGGACAGTGCTGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TLPNPNAAISIGFFRNKRSHHNA*WTVLST Trigger: AGTGGACAGCACTGTCCAGCAGGCATTGTGGTGTGA...CCGCTTGTTTCTGAAAAAGCCAATAGAAATTGCTGCGTTGGGATTTGGTAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | ACACTGATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACACAGTTAGATCACACCACAATGCCTaGTGGACAGTGCTGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TLINTLDSVSCYERNTVRSHHNA*WTVLST Trigger: AGTGGACAGCACTGTCCAGCAGGCATTGTGGTGTGA...TCTAACTGTGTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGATCAGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTTATCGCTTAATAGAAAGGTTGAATCTTTaGGCCCCTGAGAAAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAANTKYHRQASGVYRLIERLNL*APEKEC Trigger: GCACTCTTTCTCAGGGGCGCAAAGATTCAACCTTTC...TATTAAGCGATAAACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CCA 90 bp | AGAAGAAAGTGGGACACTCAAAGAAAGAGCAATGGAACAGTAGTCCAAAGGCTGTTTACTCAGAGGCTTTaGAGTACCAACACCGTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRKWDTQRKSNGTVVQRLFTQRL*STNTVE Trigger: CTCGACGGTGTTGGTACTCCAAAGCCTCTGAGTAAA...CAGCCTTTGGACTACTGTTCCATTGCTCTTTCTTTGAGTGTCCCACTTTCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCACAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTTATCGCACTTTGGATAAGTACTaGCAAGTTTCATCAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: PAQAANTKYHRQASGVYRTLDKY*QVSSDT Trigger: TGTGTCTGATGAAACTTGCCAGTACTTATCCAAAGT...GCGATAAACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTGTGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR CAA 72 bp | AGTCACACTGGTCTGAGAGAAAGCTGTGAGCACAGGTaGAAATGGAGTGAAAGGAGTGTTGTTCCTGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SHTGLRESCEHR*KWSERSVVPVT Trigger: TGTAACAGGAACAACACTCCTTTCACTCCATTTCAACCTGTGCTCACAGCTTTCTCTCAGACCAGTGTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | TCTTCCTGGAAGGATGTTTCAAGCAGAAGAAAATTACCATGTAACACTAGCTGCTGTGGCTTGAAAGGTTaGATCTTTGCGCCCCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSWKDVSSRRKLPCNTSCCGLKG*IFAPLR Trigger: TCTCAGGGGCGCAAAGATTCAACCTTTCAAGCCACA...GCAGCTAGTGTTACATGGTAATTTTCTTCTGCTTGAAACATCCTTCCAGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | TTCTGTCCTTGTTTTAGGTACCCACCCTCCACCTATGAGGTGACCATGACACCATTCATCCTTTGCATTTaGAACTTCCAAAGCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FCPCFRYPPSTYEVTMTPFILCI*NFQSSQ Trigger: TTGACTGCTTTGGAAGTTTCAAATGCAAAGGATGAA...TGGTGTCATGGTCACCTCATAGGTGGAGGGTGGGTACCTAAAACAAGGACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | GCGGTAATTCTGTATTTTCAGTATTTTGAGCAGGTGTCATGCACAGCCTGCACATGCATAAATCCCATCTaGCCTTGGTCAATGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVILYFQYFEQVSCTACTCINPI*PWSMVH Trigger: ATGCACCATTGACCAAGGTCAGATGGGATTTATGCA...TGTGCAGGCTGTGCATGACACCTGCTCAAAATACTGAAAATACAGAATTACCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | AGAAGAAAGTGGGACACTCAAAGAAAGAGCAATGGAACAGTAGTCCAAAGGCTGCCTCATGTGAAGAACTaGATCGTTCAAACAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRKWDTQRKSNGTVVQRLPHVKN*IVQTAS Trigger: GCTTGCTGTTTGAACGATGCAGTTCTTCACATGAGG...CAGCCTTTGGACTACTGTTCCATTGCTCTTTCTTTGAGTGTCCCACTTTCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTAAATGGTTCTGAGTTAAGAGACACACTGATCAACACTTTAGACTCTGTTCTAGTAGTTGCATTCTaGAGGGTCCCTGCCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WLNGSELRDTLINTLDSVLVVAF*RVPACS Trigger: TGAGCAGGCAGGGACCCTGCAGAATGCAACTACTAG...AACAGAGTCTAAAGTGTTGATCAGTGTGTCTCTTAACTCAGAACCATTTAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR GCA 90 bp | AAACGCTCCCGGAGAGCACAAAGTCCATTTTCACAATGTGGCTTTTTAAGCCTTCTTCTCCACTGGGGCTaGATCTTTTGCATGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KRSRRAQSPFSQCGFLSLLLHWG*IFCMYV Trigger: AACATACATGCAAAAGATGCAGCCCCAGTGGAGAAG...AAGGCTTAAAAAGCCACATTGTGAAAATGGACTTTGTGCTCTCCGGGAGCGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | ATGAACCTGATCACGTTGGCCGGTAAAGTAGAAGAAAGTGGGACACTCAAAGAACTTCTCCACTGGGGCTaGATCTTTTGCATGTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: MNLITLAGKVEESGTLKELLHWG*IFCMYV Trigger: AACATACATGCAAAAGATGCAGCCCCAGTGGAGAAG...TTCTTTGAGTGTCCCACTTTCTTCTACTTTACCGGCCAACGTGATCAGGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR GCA 90 bp | ACATTACCAAATCCCAACGCAGCAATTTCTATTGGCTTTTTCAGAAACAAGCGGAGACAAGCAGGCTCCTaGAATGATGTAGACGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLPNPNAAISIGFFRNKRRQAGS*NDVDVC Trigger: GCACACGTCTACATCATTGCAGGAGCCTGCTTGTCT...CCGCTTGTTTCTGAAAAAGCCAATAGAAATTGCTGCGTTGGGATTTGGTAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CCA 90 bp | ATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACACAGTTAGAGGTGCGTCTGCTTGTGGCTTTTaGGGAGTTGAGGTTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: INTLDSVSCYERNTVRGASACGF*GVEVTL Trigger: CAAAGTAACCTCAACTCCCCAAAAGCCACAAGCAGA...CGCACCTCTAACTGTGTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| 3UTR CAA 72 bp | TTCCATTGGTTACAAAACAGAAATGCTGCCTTCACTTaGCTGCCATCAGGATTCTGTGCCGCAGTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FHWLQNRNAAFT*LPSGFCAAVIS Trigger: AGAAATGACTGCGGCACAGAATCCTGATGGCAGCAAAGTGAAGGCAGCATTTCTGTTTTGTAACCAATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | ACACTGATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACACAGTTAGACTTGTCCAGTGGTTTTaGCAAGAGTTGGGGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLINTLDSVSCYERNTVRLVQWF*QELGNL Trigger: GAGATTCCCCAACTCTTGTCAAAACCACTGGACAAG...TCTAACTGTGTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGATCAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR TCA 90 bp | GCGGTAATTCTGTATTTTCAGTATTTTGAGCAGGTGTCATGCACAGCCTGCACATGGTGTCTCCTTCTTTaGTCTGATAACTTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: AVILYFQYFEQVSCTACTWCLLL*SDNLET Trigger: AGTCTCCAAGTTATCAGATCAAAGAAGGAGACACCA...TGTGCAGGCTGTGCATGACACCTGCTCAAAATACTGAAAATACAGAATTACCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR CAA 72 bp | TCTGTCCTGTTCCCATACAGTTCCATTTCTACAACCTaGGGAAAGCACTTTGTGACTCTTAAGCTTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLFPYSSISTT*GKHFVTLKLQL Trigger: AAGCTGAAGCTTAAGAGTCACAAAGTGCTTTCCCAAGGTTGTAGAAATGGAACTGTATGGGAACAGGACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | ATGAACCTGATCACGTTGGCCGGTAAAGTAGAAGAAAGTGGGACACTCAAAGAATTCCCGTCTATGCTATaGATGTTCATACATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: MNLITLAGKVEESGTLKEFPSML*MFIHEL Trigger: GAGTTCATGTATGAACATGCATAGCATAGACGGGAA...TTCTTTGAGTGTCCCACTTTCTTCTACTTTACCGGCCAACGTGATCAGGTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTGGAAGGATGTTTCAAGCAGAAGAAAATTACCATGTAACACTAGCTGCCCTCATGTGAAGAACTaGATCGTTCAAACAGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSWKDVSSRRKLPCNTSCPHVKN*IVQTAS Trigger: GCTTGCTGTTTGAACGATGCAGTTCTTCACATGAGG...GCAGCTAGTGTTACATGGTAATTTTCTTCTGCTTGAAACATCCTTCCAGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | CCAAATCCCAACGCAGCAATTTCTATTGGCTTTTTCAGAAACAAGCGGGAAGTTAACCTGTTTTCTTCTTaGTCTGCTTGTGGCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PNPNAAISIGFFRNKREVNLFSS*SACGFW Trigger: CCAAAAGCCACAAGCAGAGCAAGAAGAAAACAGGTT...AACTTCCCGCTTGTTTCTGAAAAAGCCAATAGAAATTGCTGCGTTGGGATTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | CTGATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACACAGTTAGAGGTGAAACGGAAGCAGAATaGCGGAAAGTAAACCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LINTLDSVSCYERNTVRGETEAE*RKVNLF Trigger: AAACAGGTTTACTTTCCGGCATTCTGCTTCCGTTTC...ACCTCTAACTGTGTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR GCA 90 bp | GCGGTAATTCTGTATTTTCAGTATTTTGAGCAGGTGTCATGCACAGCCTGCACAATGAGAGCACAGATTTaGCTCTGGGTAAATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AVILYFQYFEQVSCTACTMRAQI*LWVNFL Trigger: AAGGAAATTTACCCAGAGGCAAATCTGTGCTCTCAT...TGTGCAGGCTGTGCATGACACCTGCTCAAAATACTGAAAATACAGAATTACCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CCA 90 bp | CTGATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACACAGTTAGAGGTGCACAGATTTGCCTCTaGGTAAATTTCCTTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LINTLDSVSCYERNTVRGAQICL*VNFLHK Trigger: CTTGTGAAGGAAATTTACCCAGAGGCAAATCTGTGC...ACCTCTAACTGTGTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGATCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| 3UTR CAA 72 bp | GTTCCTCACAAGGGAATCTTCTTAGTTTGTGAGCAGTaGTGCTATGAGTTCTCACATGGTACAGAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VPHKGIFLVCEQ*CYEFSHGTERK Trigger: TTTTCTCTCTGTACCATGTGAGAACTCATAGCACAACTGCTCACAAACTAAGAAGATTCCCTTGTGAGGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | CTGATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACACAGTTAGAGGTGATTTGTTCAAAAGATaGGACTCAACATTGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LINTLDSVSCYERNTVRGDLFKR*DSTLRW Trigger: CCATCGCAATGTTGAGTCTCATCTTTTGAACAAATC...ACCTCTAACTGTGTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGATCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR TCA 90 bp | TTAATTGCAATCCCTAATCTAAAAGTGAAGGAAAGCACATTTTGCCCTCAAGGTCTTGTCCAGTGGTTTTaGCAAGAGTTGGGGAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIAIPNLKVKESTFCPQGLVQWF*QELGNL Trigger: GAGATTCCCCAACTCTTGTCAAAACCACTGGACAAG...ACCTTGAGGGCAAAATGTGCTTTCCTTCACTTTTAGATTAGGGATTGCAATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | TGGCTAAATGGTTCTGAGTTAAGAGACACACTGATCAACACTTTAGACTCTGTTTGCATAAATCCCATCTaGCCTTGGTCAATGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WLNGSELRDTLINTLDSVCINPI*PWSMVH Trigger: ATGCACCATTGACCAAGGTCAGATGGGATTTATGCA...AACAGAGTCTAAAGTGTTGATCAGTGTGTCTCTTAACTCAGAACCATTTAGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTTTTTCCTCTTCTGAGCAGGACATCGATTCTACCAAATAGACTCCCCCTTCAAATTCAAGTCCTCTaGACAAGGCAATTCAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLFPLLSRTSILPNRLPLQIQVL*TRQFNF Trigger: GAAATTGAATTGCCTTGTTCAGAGGACTTGAATTTG...AAGGGGGAGTCTATTTGGTAGAATCGATGTCCTGCTCAGAAGAGGAAAAAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | TTAATTGCAATCCCTAATCTAAAAGTGAAGGAAAGCACATTTTGCCCTCAAGGTAAGGGCAGCAATGGATaGGTTGGATGTGCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIAIPNLKVKESTFCPQGKGSNG*VGCAQR Trigger: TCTTTGAGCACATCCAACTCATCCATTGCTGCCCTT...ACCTTGAGGGCAAAATGTGCTTTCCTTCACTTTTAGATTAGGGATTGCAATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | TTAAGAGACACACTGATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACCAAACATTTGCCACCTaGAAAGGTAAGGAAGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: LRDTLINTLDSVSCYERNQTFAT*KGKEAI Trigger: TATAGCTTCCTTACCTTTTCAGGTGGCAAATGTTTG...GTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGATCAGTGTGTCTCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR TCA 90 bp | CTAAAAGTGAAGGAAAGCACATTTTGCCCTCAAGGTCAGCCACAAATTACCTTGTTTTCTCTTATAATCTaGGGAACATTGCTGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LKVKESTFCPQGQPQITLFSLII*GTLLST Trigger: GGTTGACAGCAATGTTCCTCAGATTATAAGAGAAAA...CAAGGTAATTTGTGGCTGACCTTGAGGGCAAAATGTGCTTTCCTTCACTTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | ACATTACCAAATCCCAACGCAGCAATTTCTATTGGCTTTTTCAGAAACAAGCGGAATCCTTCCCGTCTATaGTATGCATGTTCATACATG | + |
|
Preference number: 4 (lower is better) Translates to: TLPNPNAAISIGFFRNKRNPSRL*YACSYM Trigger: CATGTATGAACATGCATAGCATAGACGGGAAGGATT...CCGCTTGTTTCTGAAAAAGCCAATAGAAATTGCTGCGTTGGGATTTGGTAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR GCA 90 bp | GCGGTAATTCTGTATTTTCAGTATTTTGAGCAGGTGTCATGCACAGCCTGCACAAAACACAATTTTCACTaGTGGATCTACAACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: AVILYFQYFEQVSCTACTKHNFH*WIYNIL Trigger: CAGTATGTTGTAGATCCAGCAGTGAAAATTGTGTTT...TGTGCAGGCTGTGCATGACACCTGCTCAAAATACTGAAAATACAGAATTACCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| 3UTR CAA 72 bp | GGAGAATTATTAGAATGTCTAATGAACCTGATCACGTaGGCCGGTAAAGTAGAAGAAAGTGGGACACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GELLECLMNLIT*AGKVEESGTLK Trigger: TTTGAGTGTCCCACTTTCTTCTACTTTACCGGCCAACGTGATCAGGTTCATTAGACATTCTAATAATTCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CCA 90 bp | TTAATTGCAATCCCTAATCTAAAAGTGAAGGAAAGCACATTTTGCCCTCAAGGTTCTTCAATGAACTCATaGTCACTGAGTTCTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LIAIPNLKVKESTFCPQGSSMNS*SLSSGY Trigger: GTACCCAGAACTCAGTGACCATGAGTTCATTGAAGA...ACCTTGAGGGCAAAATGTGCTTTCCTTCACTTTTAGATTAGGGATTGCAATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR TCA 90 bp | TGGCTAAATGGTTCTGAGTTAAGAGACACACTGATCAACACTTTAGACTCTGTTTTCATCCTTTGCATTTaGAACTTCCAAAGCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WLNGSELRDTLINTLDSVFILCI*NFQSSQ Trigger: TTGACTGCTTTGGAAGTTTCAAATGCAAAGGATGAA...AACAGAGTCTAAAGTGTTGATCAGTGTGTCTCTTAACTCAGAACCATTTAGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTAAATGGTTCTGAGTTAAGAGACACACTGATCAACACTTTAGACTCTGTTACTTTGGATAAGTACTaGCAAGTTTCATCAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: WLNGSELRDTLINTLDSVTLDKY*QVSSDT Trigger: TGTGTCTGATGAAACTTGCCAGTACTTATCCAAAGT...AACAGAGTCTAAAGTGTTGATCAGTGTGTCTCTTAACTCAGAACCATTTAGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGAAGTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGAAGGCCCAGCTGGCCATGTaGGGAGGCACGTCGATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CRSEQDHSGPRSRPRQGKAQLAM*GGTSMF Trigger: AAACATCGACGTGCCTCCCAACATGGCCAGCTGGGC...CTTCCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGCAGAAGTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCGAGACAAGGGCTGTGGCTTGAAAGGTaGAATCTTTGCGCCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GCRSEQDHSGPRSRPRQGLWLER*NLCAPE Trigger: CTCAGGGGCGCAAAGATTCAACCTTTCAAGCCACAG...CCCTTGTCTCGGTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CAA 90 bp | TTCAGGTGTTTCTCGGGCTCTTCCCTTGACGTGGTTCCCAGGAGGCTGGCTGCTCCAGAATCTCCTGTTTaGGACCCATGCTCACAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FRCFSGSSLDVVPRRLAAPESPV*DPCSQS Trigger: CGACTGTGAGCATGGGTCCAAAACAGGAGATTCTGG...AGCAGCCAGCCTCCTGGGAACCACGTCAAGGGAAGAGCCCGAGAAACACCTGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CAA 90 bp | TTTGAGCAGGTGTCATGCACAGCCTGCACAGGCTGCAAACACCAAGTACCACAGGGAGTTCAGCAAAGCTaGTGCTCCCTTCCAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FEQVSCTACTGCKHQVPQGVQQS*CSLPVP Trigger: TGGGACTGGAAGGGAGCACAAGCTTTGCTGAACTCC...CTGTGGTACTTGGTGTTTGCAGCCTGTGCAGGCTGTGCATGACACCTGCTCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CAA 90 bp | CCTGCACAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTTATCGCCTGTGGCTTGAAAGGTaGAATCTTTGCGCCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PAQAANTKYHRQASGVYRLWLER*NLCAPE Trigger: CTCAGGGGCGCAAAGATTCAACCTTTCAAGCCACAG...GCGATAAACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTGTGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CAA 90 bp | GTCTGTCTGCTGGACAGTACCTACACTCAAAGCAGCTGCCCCTTGTGTCTCCATGCCAAAAATGAGTCGTaGAAACTGCCACTCGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VCLLDSTYTQSSCPLCLHAKNES*KLPLGE Trigger: CTCTCCGAGTGGCAGTTTCAACGACTCATTTTTGGC...ATGGAGACACAAGGGGCAGCTGCTTTGAGTGTAGGTACTGTCCAGCAGACAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CAA 90 bp | CCCTTGACGTGGTTCCCAGGAGGCTGGCTGCTGTGCATGGTAAGACTGGTTCCCCTTCATCCTTTGCATTaGAAACTTCCAAAGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLTWFPGGWLLCMVRLVPLHPLH*KLPKQS Trigger: TGACTGCTTTGGAAGTTTCAAATGCAAAGGATGAAG...GGGAACCAGTCTTACCATGCACAGCAGCCAGCCTCCTGGGAACCACGTCAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CAA 90 bp | CCTGCACAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTTATCGCCCTGTGCATTCCAGTTaGAAATCGCCTATGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PAQAANTKYHRQASGVYRPVHSS*KSPMAS Trigger: GGAGGCCATAGGCGATTTCAAACTGGAATGCACAGG...GCGATAAACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTGTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CAA 90 bp | AGTAGTCCAAAGGCTGCAGAAGTGAGCAGGACCACTCAGGCCCCAGAAGCAGACCTTCATCCTTTGCATTaGAAACTTCCAAAGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSPKAAEVSRTTQAPEADLHPLH*KLPKQS Trigger: TGACTGCTTTGGAAGTTTCAAATGCAAAGGATGAAG...GTCTGCTTCTGGGGCCTGAGTGGTCCTGCTCACTTCTGCAGCCTTTGGACTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CAA 90 bp | CCATACAGTTCCATTTCTACAACCTTGGGAAAGCACTTTGTGACTCTTAAGCTTGCCCAGCTGGCCATGTaGGGAGGCACGTCGATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PYSSISTTLGKHFVTLKLAQLAM*GGTSMF Trigger: AAACATCGACGTGCCTCCCAACATGGCCAGCTGGGC...AAGCTTAAGAGTCACAAAGTGCTTTCCCAAGGTTGTAGAAATGGAACTGTATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTTATCGCTTAATACAGGTACCAGGAGCCTaGGTTCTGCAGCTAGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: QAANTKYHRQASGVYRLIQVPGA*VLQLAH Trigger: ATGTGCTAGCTGCAGAACCAAGGCTCCTGGTACCTG...TATTAAGCGATAAACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CAA 90 bp | GCGGTAATTCTGTATTTTCAGTATTTTGAGCAGGTGTCATGCACAGCCTGCACAGCATCATGTTGGACATaGTCAGGGAAGGAGCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AVILYFQYFEQVSCTACTASCWT*SGKEPE Trigger: TTCCGGCTCCTTCCCTGACAATGTCCAACATGATGC...TGTGCAGGCTGTGCATGACACCTGCTCAAAATACTGAAAATACAGAATTACCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CAA 90 bp | ATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACACAGTTAGAGGTGCGGCATCATGTTGGACATaGTCAGGGAAGGAGCCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: INTLDSVSCYERNTVRGAASCWT*SGKEPE Trigger: TTCCGGCTCCTTCCCTGACAATGTCCAACATGATGC...CGCACCTCTAACTGTGTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CAA 90 bp | ACACTGATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACACAGTTAGAGCCAAAAATGAGTCGTaGAAACTGCCACTCGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TLINTLDSVSCYERNTVRAKNES*KLPLGE Trigger: CTCTCCGAGTGGCAGTTTCAACGACTCATTTTTGGC...TCTAACTGTGTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGATCAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
||
| CDS-3UTR CAA 90 bp | GCGGTAATTCTGTATTTTCAGTATTTTGAGCAGGTGTCATGCACAGCCTGCACAGTGGCTTTTGGGGAGTaGAGGTTACTTTGGATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AVILYFQYFEQVSCTACTVAFGE*RLLWIS Trigger: ACTTATCCAAAGTAACCTCAACTCCCCAAAAGCCAC...TGTGCAGGCTGTGCATGACACCTGCTCAAAATACTGAAAATACAGAATTACCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
||
| CDS-3UTR CAA 90 bp | ACATTACCAAATCCCAACGCAGCAATTTCTATTGGCTTTTTCAGAAACAAGCGGGAAATTGTTTCAGGCTaGAAAGCCCGGGCTTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: TLPNPNAAISIGFFRNKREIVSG*KARASE Trigger: CTCTGAAGCCCGGGCTTTCAAGCCTGAAACAATTTC...CCGCTTGTTTCTGAAAAAGCCAATAGAAATTGCTGCGTTGGGATTTGGTAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS CCA 90 bp | TGCCGGAAAGTAAACCTGTTTTCTTCTTGCTCTGCTTGTGGCTTTTaGGGAGTTGAGGTTACTTTGGATAAGTACTGGCAAGTTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: CRKVNLFSSCSACGF*GVEVTLDKYWQVSS Trigger: TGATGAAACTTGCCAGTACTTATCCAAAGTAACCTCAACTCCCCAAAAGCCACAAGCAGAGCAAGAAGAAAACAGGTTTACTTTCCGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014499.10 ENSMUST00000110333.2 |
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| CDS-3UTR CAA 90 bp | CCAAATCCCAACGCAGCAATTTCTATTGGCTTTTTCAGAAACAAGCGGGAAGTTAAATCCCATCTGACCTaGGTCAATGGTGCATACTTG | + |
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Preference number: 5 (lower is better) Translates to: PNPNAAISIGFFRNKREVKSHLT*VNGAYL Trigger: CAAGTATGCACCATTGACCAAGGTCAGATGGGATTT...AACTTCCCGCTTGTTTCTGAAAAAGCCAATAGAAATTGCTGCGTTGGGATTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR CAA 90 bp | CAGGCTGCAAACACCAAGTACCACAGACAAGCATCAGGAGTTTATCGCTTAATAAAACCTGTTTTCTTCTaGCTCTGCTTGTGGCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: QAANTKYHRQASGVYRLIKPVFF*LCLWLL Trigger: CAAAAGCCACAAGCAGAGCAAGAAGAAAACAGGTTT...TATTAAGCGATAAACTCCTGATGCTTGTCTGTGGTACTTGGTGTTTGCAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS-3UTR CAA 90 bp | TGGCTAAATGGTTCTGAGTTAAGAGACACACTGATCAACACTTTAGACTCTGTTAAATCCCATCTGACCTaGGTCAATGGTGCATACTTG | + |
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Preference number: 5 (lower is better) Translates to: WLNGSELRDTLINTLDSVKSHLT*VNGAYL Trigger: CAAGTATGCACCATTGACCAAGGTCAGATGGGATTT...AACAGAGTCTAAAGTGTTGATCAGTGTGTCTCTTAACTCAGAACCATTTAGCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
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| CDS-3UTR CAA 90 bp | TGGCTAAATGGTTCTGAGTTAAGAGACACACTGATCAACACTTTAGACTCTGTTGTGGCTTTTGGGGAGTaGAGGTTACTTTGGATAAGT | + |
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Preference number: 5 (lower is better) Translates to: WLNGSELRDTLINTLDSVVAFGE*RLLWIS Trigger: ACTTATCCAAAGTAACCTCAACTCCCCAAAAGCCAC...AACAGAGTCTAAAGTGTTGATCAGTGTGTCTCTTAACTCAGAACCATTTAGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
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| CDS-3UTR CAA 90 bp | TTAAGAGACACACTGATCAACACTTTAGACTCTGTTTCCTGCTATGAGAGGAACAAACCTGTTTTCTTCTaGCTCTGCTTGTGGCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: LRDTLINTLDSVSCYERNKPVFF*LCLWLL Trigger: CAAAAGCCACAAGCAGAGCAAGAAGAAAACAGGTTT...GTTCCTCTCATAGCAGGAAACAGAGTCTAAAGTGTTGATCAGTGTGTCTCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110333.2 |
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| CDS-3UTR CAA 90 bp | ACATTACCAAATCCCAACGCAGCAATTTCTATTGGCTTTTTCAGAAACAAGCGGTCTTTTGCATGTATGTaGGTGACAGAGCCAAAGATA | + |
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Preference number: 5 (lower is better) Translates to: TLPNPNAAISIGFFRNKRSFACM*VTEPKI Trigger: TATCTTTGGCTCTGTCACCAACATACATGCAAAAGA...CCGCTTGTTTCTGAAAAAGCCAATAGAAATTGCTGCGTTGGGATTTGGTAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS TCA 72 bp | GCATGTTTAGCTGAGACTTCTCAACAGGCTGCCCACTaGGGTAGGCATGCACACACACATCACCGCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: ACLAETSQQAAH*GRHAHTHHRQL Trigger: AAGCTGGCGGTGATGTGTGTGTGCATGCCTACCTCAGTGGGCAGCCTGTTGAGAAGTCTCAGCTAAACATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS GCA 72 bp | GGGCGCAGAGAAGGGCAGCAATGGATGAGTTGGATGTaGTCAAAGAGTACCTTCCTCCTCCCAAAAAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: GRREGQQWMSWM*SKSTFLLPKRE Trigger: TTCTCTTTTTGGGAGGAGGAAGGTACTCTTTGAGCACATCCAACTCATCCATTGCTGCCCTTCTCTGCGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014499.10 |
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| CDS GCA 72 bp | CATGGTGTGTATCTTCTCCACTGGGGCTGCATCTTTTaGATGTATGTTGGTGACAGAGCCAAAGATAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HGVYLLHWGCIF*MYVGDRAKDKL Trigger: CAGCTTATCTTTGGCTCTGTCACCAACATACATGCAAAAGATGCAGCCCCAGTGGAGAAGATACACACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014499.10 ENSMUST00000110333.2 |
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| CDS CCA 72 bp | GATGTTTCCGCTATTAAGATCTACAGTTGTGTTTCGTaGAGGGGCTCGCCCTGTCAGATTCAATTTAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: DVSAIKIYSCVS*RGSPCQIQFRN Trigger: GTTCCTAAATTGAATCTGACAGGGCGAGCCCCTCCACGAAACACAACTGTAGATCTTAATAGCGGAAACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014499.10 ENSMUST00000110333.2 |
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| CDS CAA 72 bp | TGCTCTGCTTGTGGCTTTTGGGGAGTTGAGGTTACTTaGGATAAGTACTGGCAAGTTTCATCAGACACACAG | + |
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Preference number: 6 (lower is better) Translates to: CSACGFWGVEVT*DKYWQVSSDTQ Trigger: CTGTGTGTCTGATGAAACTTGCCAGTACTTATCCAAAGTAACCTCAACTCCCCAAAAGCCACAAGCAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014499.10 ENSMUST00000110333.2 |
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| CDS CAA 90 bp | GGGATGATGCATAAATCCCATCTGACCTTGGTCAATGGTGCATACTaGTCCAGTGGTTTTGACAAGAGTTGGGGAATCTCGATAGTAATG | + |
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Preference number: 6 (lower is better) Translates to: GMMHKSHLTLVNGAY*SSGFDKSWGISIVM Trigger: CATTACTATCGAGATTCCCCAACTCTTGTCAAAACCACTGGACAAGTATGCACCATTGACCAAGGTCAGATGGGATTTATGCATCATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014499.10 ENSMUST00000110333.2 |
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