Pregenerated sensors for AMZ2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020610Ensembl transcript IDs: ENSMUST00000020929.17, ENSMUST00000092500.11, ENSMUST00000103061.3, ENSMUST00000238825.2
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCATCGCTTCCTGCAGGGACAGGCTCAGAAATGGCCAGGAAAGAGTaGAGGGCACCCACGGGTCAGAAGGATGGCAGCCTGTGCAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: PSLPAGTGSEMARKE*RAPTGQKDGSLCKA Trigger: GGCCTTGCACAGGCTGCCATCCTTCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCTGCAGGAAGCGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR CCA 90 bp | AGAAATGGCCAGGAAAGAGTGCAGGGCACCCACGGGTCAGAAGGATaGCAGCCTGTGCAAGGCCAAAGCCCTGGTGACTCGGCTGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: RNGQERVQGTHGSEG*QPVQGQSPGDSAGP Trigger: AGGCCCAGCCGAGTCACCAGGGCTTTGGCCTTGCACAGGCTGCCATCCTTCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR TCA 90 bp | CCCGCCCCAGCTGCTGTGGGAAAGGACCACTGCTGTTCTCACTGCTaGGAACTGATAGAAGCCATCGCTTCCTGCAGGGACAGGCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: PAPAAVGKDHCCSHC*ELIEAIASCRDRLR Trigger: TCTGAGCCTGTCCCTGCAGGAAGCGATGGCTTCTATCAGTTCTCAGCAGTGAGAACAGCAGTGGTCCTTTCCCACAGCAGCTGGGGCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR CCA 90 bp | AGAACTGATAGAAGCCATCGCTTCCTGCAGGGACAGGCTCAGAAATaGCCAGGAAAGAGTGCAGGGCACCCACGGGTCAGAAGGATGGCA | + |
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Preference number: 1 (lower is better) Translates to: RTDRSHRFLQGQAQK*PGKSAGHPRVRRMA Trigger: TGCCATCCTTCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCTGCAGGAAGCGATGGCTTCTATCAGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR GCA 90 bp | AAGGAAGGCAGAGAGGGTTTTGTTGTTCTTAGTGAACCTTGTTCCTaGCCCAGGGCTCAGACAAGCTCTAGTCTGTCACCTGGCCTCCGC | + |
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Preference number: 1 (lower is better) Translates to: KEGREGFVVLSEPCS*PRAQTSSSLSPGLR Trigger: GCGGAGGCCAGGTGACAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAACAAAACCCTCTCTGCCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| 3UTR TCA 90 bp | TATCTGAAGGGCAGAGGTGATGGAGTTACTGCCACAGACCAGCTGTaGTACGGGAAGGAAGGCAGAGAGGGTTTTGTTGTTCTTAGTGAA | + |
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Preference number: 1 (lower is better) Translates to: YLKGRGDGVTATDQL*YGKEGREGFVVLSE Trigger: TTCACTAAGAACAACAAAACCCTCTCTGCCTTCCTTCCCGTATCACAGCTGGTCTGTGGCAGTAACTCCATCACCTCTGCCCTTCAGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGACAGGCTCAGAAATGGCCAGGAAAGAGTGCAGGGCACCCACGGGTCAGAAAGGCCAAAGCCCTGGTaGCTCGGCTGGGCCTCACAA | + |
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Preference number: 2 (lower is better) Translates to: RDRLRNGQERVQGTHGSERPKPW*LGWASQ Trigger: TTGTGAGGCCCAGCCGAGTCACCAGGGCTTTGGCCT...TTCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGAAATGGCCAGGAAAGAGTGCAGGGCACCCACGGGTCAGAAGGATGGCATCACCTAATCCTATCTaGAGGGCAGAGGTGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: AQKWPGKSAGHPRVRRMASPNPI*RAEVME Trigger: CTCCATCACCTCTGCCCTTCAGATAGGATTAGGTGA...TGCCATCCTTCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTGATGGAGTTACTGCCACAGACCAGCTGTGATACGGGAAGGAAGGCAGAGAGTGAACCTTGTTCCTaGCCCAGGGCTCAGACAAGC | + |
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Preference number: 2 (lower is better) Translates to: EVMELLPQTSCDTGRKAESEPCS*PRAQTS Trigger: GCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACT...CTCTGCCTTCCTTCCCGTATCACAGCTGGTCTGTGGCAGTAACTCCATCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| 3UTR-3UTR TCA 90 bp | CCATCGCTTCCTGCAGGGACAGGCTCAGAAATGGCCAGGAAAGAGTGCAGGGCAAACCTGGAAAAGTGCTaGTTCATTCCTAGGGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: PSLPAGTGSEMARKECRANLEKC*FIPRAT Trigger: TGTGGCCCTAGGAATGAATCAGCACTTTTCCAGGTT...TGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCTGCAGGAAGCGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR CAA 90 bp | CCACAGACCAGCTGTGATACGGGAAGGAAGGCAGAGAGGGTTTTGTaGTTCTTAGTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: PQTSCDTGRKAERVL*FLVNLVPAPGLRQA Trigger: AGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAACAAAACCCTCTCTGCCTTCCTTCCCGTATCACAGCTGGTCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| 3UTR CAA 90 bp | CTGCCACAGACCAGCTGTGATACGGGAAGGAAGGCAGAGAGGGTTTaGTTGTTCTTAGTGAACCTTGTTCCTGCCCCAGGGCTCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: LPQTSCDTGRKAERV*LFLVNLVPAPGLRQ Trigger: TTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAACAAAACCCTCTCTGCCTTCCTTCCCGTATCACAGCTGGTCTGTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| 3UTR CAA 90 bp | TGTTTTCCAAGATGCATTGACCTCACAGATGGGTTGAGCCTGAGGTaGCCAACCTGCTTACCGCAGCTCACTGAGATCCAGGCTGACAGA | + |
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Preference number: 2 (lower is better) Translates to: CFPRCIDLTDGLSLR*PTCLPQLTEIQADR Trigger: TCTGTCAGCCTGGATCTCAGTGAGCTGCGGTAAGCAGGTTGGCAACCTCAGGCTCAACCCATCTGTGAGGTCAATGCATCTTGGAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGTGGGGAGCTGGGGGCCAGAGTTGTTGCTCAACTGTAGAGTGCTAAGCTTGTCACCTAATCCTATCTaGAGGGCAGAGGTGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: KVGSWGPELLLNCRVLSLSPNPI*RAEVME Trigger: CTCCATCACCTCTGCCCTTCAGATAGGATTAGGTGA...CAAGCTTAGCACTCTACAGTTGAGCAACAACTCTGGCCCCCAGCTCCCCACTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAAGTTGCCTGCCACCAAGTCTGACAATCTGAGTTCAATTCCTAGGACCCACGCTATGACATGCATGTaGCTGCACACAGACACACAC | + |
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Preference number: 2 (lower is better) Translates to: VKLPATKSDNLSSIPRTHAMTCM*LHTDTH Trigger: GTGTGTGTCTGTGTGCAGGCACATGCATGTCATAGC...GTGGGTCCTAGGAATTGAACTCAGATTGTCAGACTTGGTGGCAGGCAACTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGGCTCAGACAAGCTCTAGTCTGTCACCTGGCCTCCGCAGACAGTGTATCCACGAACACCTAGTGTaGCAGTATTTATTTCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: PRAQTSSSLSPGLRRQCIHEHLV*QYLFQL Trigger: TAACTGAAATAAATACTGGCACACTAGGTGTTCGTG...GATACACTGTCTGCGGAGGCCAGGTGACAGACTAGAGCTTGTCTGAGCCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| 3UTR-3UTR TCA 90 bp | GCATTCACGGCCAGCCAGGGCTACTTAAAGAGACCCTGTCTCAAAGGACAACAACATGTCACAGTACAATaGAGTAGACAAAACACCGTA | + |
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Preference number: 2 (lower is better) Translates to: AFTASQGYLKRPCLKGQQHVTVQ*SRQNTV Trigger: TACGGTGTTTTGTCTACTTCATTGTACTGTGACATG...TTGTTGTCCTTTGAGACAGGGTCTCTTTAAGTAGCCCTGGCTGGCCGTGAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR-3UTR GCA 90 bp | AAAACAGTACTACAAATAAGGAATATGCTGCCAGGTCACTTTCTGTTTTCCAAGAAGGATGGCAGCCTGTaGAAGGCCAAAGCCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: KTVLQIRNMLPGHFLFSKKDGSL*KAKALV Trigger: CACCAGGGCTTTGGCCTTGCACAGGCTGCCATCCTT...CTTGGAAAACAGAAAGTGACCTGGCAGCATATTCCTTATTTGTAGTACTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR CAA 90 bp | ACAGCCCAAGTTGTAACGATTCTTCAGGTGTTGTTAAAGGCAATGTaGTGCTATTTAAAGGGGAGGGGGATAACAGACGACAAATCGCCT | + |
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Preference number: 2 (lower is better) Translates to: TAQVVTILQVLLKAM*CYLKGRGITDDKSP Trigger: AGGCGATTTGTCGTCTGTTATCCCCCTCCCCTTTAAATAGCACAACATTGCCTTTAACAACACCTGAAGAATCGTTACAACTTGGGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGCTCTTTAAATGCTTCAGAGAGCTTTTCTGGTCTCATAATGTAAGTTTTTTAAAGGCAATGTTGTaGTATTTAAAGGGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: LWLFKCFRELFWSHNVSFLKAML*YLKGRG Trigger: CCCCCTCCCCTTTAAATAGCACAACATTGCCTTTAA...AAAACTTACATTATGAGACCAGAAAAGCTCTCTGAAGCATTTAAAGAGCCACAG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
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| 3UTR-3UTR GCA 90 bp | AAAACAGTACTACAAATAAGGAATATGCTGCCAGGTCACTTTCTGTTTTCCAAGCACGAACACCTAGTGTaGCAGTATTTATTTCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: KTVLQIRNMLPGHFLFSKHEHLV*QYLFQL Trigger: TAACTGAAATAAATACTGGCACACTAGGTGTTCGTG...CTTGGAAAACAGAAAGTGACCTGGCAGCATATTCCTTATTTGTAGTACTGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR GCA 72 bp | TGCAGGGCACCCACGGGTCAGAAGGATGGCAGCCTGTaGAAGGCCAAAGCCCTGGTGACTCGGCTGGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: CRAPTGQKDGSL*KAKALVTRLGL Trigger: GAGGCCCAGCCGAGTCACCAGGGCTTTGGCCTTGCACAGGCTGCCATCCTTCTGACCCGTGGGTGCCCTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR GCA 72 bp | CCTGCAGGGACAGGCTCAGAAATGGCCAGGAAAGAGTaGAGGGCACCCACGGGTCAGAAGGATGGCAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: PAGTGSEMARKE*RAPTGQKDGSL Trigger: CAGGCTGCCATCCTTCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCTGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR CCA 72 bp | CAGGAAAGAGTGCAGGGCACCCACGGGTCAGAAGGATaGCAGCCTGTGCAAGGCCAAAGCCCTGGTGACTCG | + |
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Preference number: 3 (lower is better) Translates to: QERVQGTHGSEG*QPVQGQSPGDS Trigger: CGAGTCACCAGGGCTTTGGCCTTGCACAGGCTGCCATCCTTCTGACCCGTGGGTGCCCTGCACTCTTTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR CCA 72 bp | AGAAGCCATCGCTTCCTGCAGGGACAGGCTCAGAAATaGCCAGGAAAGAGTGCAGGGCACCCACGGGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: RSHRFLQGQAQK*PGKSAGHPRVR Trigger: TCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCTGCAGGAAGCGATGGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR GCA 72 bp | GACCTCACAGATGGGTTGAGCCTGAGGTTGCCAACCTaGTTACCGCAGCTCACTGAGATCCAGGCTGACAGA | + |
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Preference number: 3 (lower is better) Translates to: DLTDGLSLRLPT*LPQLTEIQADR Trigger: TCTGTCAGCCTGGATCTCAGTGAGCTGCGGTAAGCAGGTTGGCAACCTCAGGCTCAACCCATCTGTGAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR GCA 72 bp | TCCCAGCTCTTGAGAGGCAGAGGAAGGGGTTCTCTGTaGATTCACGGCCAGCCAGGGCTACTTAAAGAGACC | + |
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Preference number: 3 (lower is better) Translates to: SQLLRGRGRGSL*IHGQPGLLKET Trigger: GGTCTCTTTAAGTAGCCCTGGCTGGCCGTGAATGCACAGAGAACCCCTTCCTCTGCCTCTCAAGAGCTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGTGGGGAGCTGGGGGCCAGAGTTGTTGCTCAACTGTAGAGTGCTAAGCTTGGACCTCACAGATGGGTaGAGCCTGAGGTTGCCAACC | + |
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Preference number: 3 (lower is better) Translates to: KVGSWGPELLLNCRVLSLDLTDG*SLRLPT Trigger: GGTTGGCAACCTCAGGCTCAACCCATCTGTGAGGTC...CAAGCTTAGCACTCTACAGTTGAGCAACAACTCTGGCCCCCAGCTCCCCACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR TCA 72 bp | GCTGCTGTGGGAAAGGACCACTGCTGTTCTCACTGCTaGGAACTGATAGAAGCCATCGCTTCCTGCAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: AAVGKDHCCSHC*ELIEAIASCRD Trigger: GTCCCTGCAGGAAGCGATGGCTTCTATCAGTTCTCAGCAGTGAGAACAGCAGTGGTCCTTTCCCACAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR TCA 72 bp | CCAGGTGTGGTAGCAAACACCTTCAGTCCCAGCTCTTaGGAGGCAGAGGAAGGGGTTCTCTGTGCATTCACG | + |
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Preference number: 3 (lower is better) Translates to: PGVVANTFSPSS*EAEEGVLCAFT Trigger: CGTGAATGCACAGAGAACCCCTTCCTCTGCCTCTCAAGAGCTGGGACTGAAGGTGTTTGCTACCACACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR TCA 72 bp | GGCAGAGGTGATGGAGTTACTGCCACAGACCAGCTGTaGTACGGGAAGGAAGGCAGAGAGGGTTTTGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: GRGDGVTATDQL*YGKEGREGFVV Trigger: AACAACAAAACCCTCTCTGCCTTCCTTCCCGTATCACAGCTGGTCTGTGGCAGTAACTCCATCACCTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGACAGGCTCAGAAATGGCCAGGAAAGAGTGCAGGGCACCCACGGGTCAGAAAAGGCAGAGAGGGTTTaGTTGTTCTTAGTGAACCTT | + |
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Preference number: 3 (lower is better) Translates to: RDRLRNGQERVQGTHGSEKAERV*LFLVNL Trigger: AAGGTTCACTAAGAACAACAAAACCCTCTCTGCCTT...TTCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR TCA 72 bp | ATGCTGCCAGGTCACTTTCTGTTTTCCAAGATGCATTaGCCTCACAGATGGGTTGAGCCTGAGGTTGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: MLPGHFLFSKMH*PHRWVEPEVAN Trigger: GTTGGCAACCTCAGGCTCAACCCATCTGTGAGGTCAATGCATCTTGGAAAACAGAAAGTGACCTGGCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR GCA 72 bp | AGAGAGGGTTTTGTTGTTCTTAGTGAACCTTGTTCCTaGCCCAGGGCTCAGACAAGCTCTAGTCTGTCACCT | + |
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Preference number: 3 (lower is better) Translates to: REGFVVLSEPCS*PRAQTSSSLSP Trigger: AGGTGACAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAACAAAACCCTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAGAAAGGGCCAGCGAGATGGCTCAGTAGGTGAAGTTGCCTGCCACCAAGTCACGATTCTTCAGGTGTaGTTAAAGGCAATGTTGTGC | + |
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Preference number: 3 (lower is better) Translates to: KRKGQRDGSVGEVACHQVTILQV*LKAMLC Trigger: GCACAACATTGCCTTTAACAACACCTGAAGAATCGT...GACTTGGTGGCAGGCAACTTCACCTACTGAGCCATCTCGCTGGCCCTTTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
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| 3UTR GCA 72 bp | GGAATATGCTGCCAGGTCACTTTCTGTTTTCCAAGATaGATTGACCTCACAGATGGGTTGAGCCTGAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: GICCQVTFCFPR*IDLTDGLSLRL Trigger: CAACCTCAGGCTCAACCCATCTGTGAGGTCAATGCATCTTGGAAAACAGAAAGTGACCTGGCAGCATATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAAAAGAAAGGGCCAGCGAGATGGCTCAGTAGGTGAAGTTGCCTGCCACCAATTGTTAAAGGCAATGTaGTGCTATTTAAAGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: IKRKGQRDGSVGEVACHQLLKAM*CYLKGR Trigger: CCTCCCCTTTAAATAGCACAACATTGCCTTTAACAA...TTGGTGGCAGGCAACTTCACCTACTGAGCCATCTCGCTGGCCCTTTCTTTTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
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| 3UTR TCA 72 bp | TTATTTGTTTGCCGTCTAGCTTCACCTAATCCTATCTaGAGGGCAGAGGTGATGGAGTTACTGCCACAGACC | + |
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Preference number: 3 (lower is better) Translates to: LFVCRLASPNPI*RAEVMELLPQT Trigger: GGTCTGTGGCAGTAACTCCATCACCTCTGCCCTTCAGATAGGATTAGGTGAAGCTAGACGGCAAACAAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| 3UTR GCA 72 bp | GTAACGATTCTTCAGGTGTTGTTAAAGGCAATGTTGTaGTATTTAAAGGGGAGGGGGATAACAGACGACAAA | + |
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Preference number: 3 (lower is better) Translates to: VTILQVLLKAML*YLKGRGITDDK Trigger: TTTGTCGTCTGTTATCCCCCTCCCCTTTAAATAGCACAACATTGCCTTTAACAACACCTGAAGAATCGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
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| 3UTR GCA 72 bp | ATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTaGCAGTATTTATTTCAGTTACTCCTGTCTCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: IPMKNSTHEHLV*QYLFQLLLSQS Trigger: ACTTTGAGACAGGAGTAACTGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS-3UTR TCA 90 bp | AGGGACAGGCTCAGAAATGGCCAGGAAAGAGTGCAGGGCACCCACGGGTCAGAATATGCCCACACCACTTaGCAAGGAGGCCTGTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: RDRLRNGQERVQGTHGSEYAHTT*QGGLSK Trigger: TTTGGACAGGCCTCCTTGTCAAGTGGTGTGGGCATA...TTCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| CDS-3UTR GCA 90 bp | TGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCTGTCACCTGGCCTCCGCAGACAGTCTGACTGGGAGTaGACAGTAATGGGCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: CSCPRAQTSSSLSPGLRRQSDWE*TVMGSN Trigger: GTTTGAGCCCATTACTGTGCACTCCCAGTCAGACTG...TCTGCGGAGGCCAGGTGACAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS-3UTR GCA 90 bp | TGGCAGCCTGTGCAAGGCCAAAGCCCTGGTGACTCGGCTGGGCCTCACAAGGGGCAAACCGTAGAAAAATaGTTCACAGTAGCCCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: WQPVQGQSPGDSAGPHKGQTVEK*FTVALE Trigger: CTCAAGGGCTACTGTGAAGCATTTTTCTACGGTTTG...CCCCTTGTGAGGCCCAGCCGAGTCACCAGGGCTTTGGCCTTGCACAGGCTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| CDS-3UTR GCA 90 bp | AGGGACAGGCTCAGAAATGGCCAGGAAAGAGTGCAGGGCACCCACGGGTCAGAACAGTCTGACTGGGAGTaGACAGTAATGGGCTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: RDRLRNGQERVQGTHGSEQSDWE*TVMGSN Trigger: GTTTGAGCCCATTACTGTGCACTCCCAGTCAGACTG...TTCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| CDS-3UTR TCA 90 bp | AGGGACAGGCTCAGAAATGGCCAGGAAAGAGTGCAGGGCACCCACGGGTCAGAAAAGCACTGGGTTCTTTaGGAGGAGAGCTGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDRLRNGQERVQGTHGSEKHWVL*EESCFQ Trigger: CTGAAAACAGCTCTCCTCTCAAAGAACCCAGTGCTT...TTCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTGATGGAGTTACTGCCACAGACCAGCTGTGATACGGGAAGGAAGGCAGAGTATGCCCACACCACTTaGCAAGGAGGCCTGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EVMELLPQTSCDTGRKAEYAHTT*QGGLSK Trigger: TTTGGACAGGCCTCCTTGTCAAGTGGTGTGGGCATA...CTCTGCCTTCCTTCCCGTATCACAGCTGGTCTGTGGCAGTAACTCCATCACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCTGTCACCTGGCCTCCGCAGATGTCCTGTGTGGATTTaGAGGTTTTGTGTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CSCPRAQTSSSLSPGLRRCPVWI*RFCVCS Trigger: TGAGCACACACAAAACCTGCAAATCCACACAGGACA...TCTGCGGAGGCCAGGTGACAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| 3UTR CAA 72 bp | AGATGCATTGACCTCACAGATGGGTTGAGCCTGAGGTaGCCAACCTGCTTACCGCAGCTCACTGAGATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCIDLTDGLSLR*PTCLPQLTEIQ Trigger: CTGGATCTCAGTGAGCTGCGGTAAGCAGGTTGGCAACCTCAGGCTCAACCCATCTGTGAGGTCAATGCATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTCACCTGGCCTCCGCAGACAGTGTATCCCAATGAAGAACTCTACCCACGAGCTGTTTTCAGTGTGTaGTCGGAGTGCCGTAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SVTWPPQTVYPNEELYPRAVFSV*SECRST Trigger: GGTACTACGGCACTCCGAGCACACACTGAAAACAGC...TCGTGGGTAGAGTTCTTCATTGGGATACACTGTCTGCGGAGGCCAGGTGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCACCTGGCCTCCGCAGACAGTGTATCCCAATGAAGAACTCTACCCACGAAGCTGTTTTCAGTGTGTaGTCGGAGTGCCGTAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LSPGLRRQCIPMKNSTHEAVFSV*SECRST Trigger: GGTACTACGGCACTCCGAGCACACACTGAAAACAGC...TTCGTGGGTAGAGTTCTTCATTGGGATACACTGTCTGCGGAGGCCAGGTGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCTGTCACCTGGCCTCCGCAGAAATCCACTTCACCAGTaGTCTGTATCTCTCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: CSCPRAQTSSSLSPGLRRNPLHQ*SVSLHN Trigger: ATTGTGGAGAGATACAGAGCACTGGTGAAGTGGATT...TCTGCGGAGGCCAGGTGACAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | GTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCTGTCACCTGGCCTCTCAAGGAGAGCAATaGATCTCATTAGCCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VNLVPAPGLRQALVCHLASQGEQ*ISLATL Trigger: GAGAGTGGCTAATGAGATGCATTGCTCTCCTTGAGA...GGCCAGGTGACAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| 3UTR CAA 72 bp | AGCTGTGATACGGGAAGGAAGGCAGAGAGGGTTTTGTaGTTCTTAGTGAACCTTGTTCCTGCCCCAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SCDTGRKAERVL*FLVNLVPAPGL Trigger: GAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAACAAAACCCTCTCTGCCTTCCTTCCCGTATCACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR TCA 90 bp | ATCAAAAGAAAGGGCCAGCGAGATGGCTCAGTAGGTGAAGTTGCCTGCCACCAAGGAGGAGATCCAGTCTaGCTGGGAGTGCACAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IKRKGQRDGSVGEVACHQGGDPV*LGVHSN Trigger: ATTACTGTGCACTCCCAGTCAGACTGGATCTCCTCC...TTGGTGGCAGGCAACTTCACCTACTGAGCCATCTCGCTGGCCCTTTCTTTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR TCA 90 bp | ATCAAAAGAAAGGGCCAGCGAGATGGCTCAGTAGGTGAAGTTGCCTGCCACCAATATGCCCACACCACTTaGCAAGGAGGCCTGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IKRKGQRDGSVGEVACHQYAHTT*QGGLSK Trigger: TTTGGACAGGCCTCCTTGTCAAGTGGTGTGGGCATA...TTGGTGGCAGGCAACTTCACCTACTGAGCCATCTCGCTGGCCCTTTCTTTTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAAGGGCCAGCGAGATGGCTCAGTAGGTGAAGTTGCCTGCCACCAAGTCGCTCAAACAGGTTACTaGGTGGCTGGAAGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRKGQRDGSVGEVACHQVAQTGY*VAGRLH Trigger: ATGAAGCCTTCCAGCCACGCAGTAACCTGTTTGAGC...GACTTGGTGGCAGGCAACTTCACCTACTGAGCCATCTCGCTGGCCCTTTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CCA 90 bp | ACGATTCTTCAGGTGTTGTTAAAGGCAATGTTGTGCTATTTAAAGGGGAGGGGGTGGGGAGCCTCGGGGTaGGAGGAGATCCAGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TILQVLLKAMLCYLKGRGWGASG*EEIQSD Trigger: GTCAGACTGGATCTCCTCCCACCCCGAGGCTCCCCA...CCCCCTCCCCTTTAAATAGCACAACATTGCCTTTAACAACACCTGAAGAATCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAAGGGCCAGCGAGATGGCTCAGTAGGTGAAGTTGCCTGCCACCAAGTCAAGCACTGGGTTCTTTaGGAGGAGAGCTGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRKGQRDGSVGEVACHQVKHWVL*EESCFQ Trigger: CTGAAAACAGCTCTCCTCTCAAAGAACCCAGTGCTT...GACTTGGTGGCAGGCAACTTCACCTACTGAGCCATCTCGCTGGCCCTTTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR TCA 90 bp | GTTGTTCTTAGTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCTGAGAGATCGATCATTGTaGTCCCCACGATGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVLSEPCSCPRAQTSSSLRDRSL*SPRCRR Trigger: CCTTCTGCATCGTGGGGATCACAATGATCGATCTCT...CAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | GTTGTTCTTAGTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCTGCAGTCTGACTGGGAGTaGACAGTAATGGGCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VVLSEPCSCPRAQTSSSLQSDWE*TVMGSN Trigger: GTTTGAGCCCATTACTGTGCACTCCCAGTCAGACTG...CAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | GCTCAGAAATGGCCAGGAAAGAGTGCAGGGCACCCACGGGTCAGAAGGATGGCAATTCTTCTTCAAGAATaGCAGGATATGTCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQKWPGKSAGHPRVRRMAILLQE*QDMSCV Trigger: CACACAGGACATATCCTGGCATTCTTGAAGAAGAAT...TGCCATCCTTCTGACCCGTGGGTGCCCTGCACTCTTTCCTGGCCATTTCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| CDS-3UTR GCA 90 bp | GTGAAGTTGCCTGCCACCAAGTCTGACAATCTGAGTTCAATTCCTAGGACCCACCAGTCTGACTGGGAGTaGACAGTAATGGGCTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VKLPATKSDNLSSIPRTHQSDWE*TVMGSN Trigger: GTTTGAGCCCATTACTGTGCACTCCCAGTCAGACTG...GTGGGTCCTAGGAATTGAACTCAGATTGTCAGACTTGGTGGCAGGCAACTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR GCA 90 bp | TCTGTCACCTGGCCTCCGCAGACAGTGTATCCCAATGAAGAACTCTACCCACGATCTCAAGGAGAGCAATaGATCTCATTAGCCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVTWPPQTVYPNEELYPRSQGEQ*ISLATL Trigger: GAGAGTGGCTAATGAGATGCATTGCTCTCCTTGAGA...TCGTGGGTAGAGTTCTTCATTGGGATACACTGTCTGCGGAGGCCAGGTGACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAAGGGCCAGCGAGATGGCTCAGTAGGTGAAGTTGCCTGCCACCAAGTCAAACAGGTTACTGCGTaGCTGGAAGGCTTCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KRKGQRDGSVGEVACHQVKQVTA*LEGFIH Trigger: ATGAATGAAGCCTTCCAGCCACGCAGTAACCTGTTT...GACTTGGTGGCAGGCAACTTCACCTACTGAGCCATCTCGCTGGCCCTTTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CCA 90 bp | TGTGGTAGCAAACACCTTCAGTCCCAGCTCTTGAGAGGCAGAGGAAGGGGTTCTAAACAGGTTACTGCGTaGCTGGAAGGCTTCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CGSKHLQSQLLRGRGRGSKQVTA*LEGFIH Trigger: ATGAATGAAGCCTTCCAGCCACGCAGTAACCTGTTT...AGAACCCCTTCCTCTGCCTCTCAAGAGCTGGGACTGAAGGTGTTTGCTACCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| CDS-3UTR CCA 90 bp | AAAGTGGGGAGCTGGGGGCCAGAGTTGTTGCTCAACTGTAGAGTGCTAAGCTTGAAACAGGTTACTGCGTaGCTGGAAGGCTTCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KVGSWGPELLLNCRVLSLKQVTA*LEGFIH Trigger: ATGAATGAAGCCTTCCAGCCACGCAGTAACCTGTTT...CAAGCTTAGCACTCTACAGTTGAGCAACAACTCTGGCCCCCAGCTCCCCACTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| CDS-3UTR TCA 90 bp | GAGTTACTGCCACAGACCAGCTGTGATACGGGAAGGAAGGCAGAGAGGGTTTTGTCAGATTCCTCCAAGTaGTTGGAGCCTTGCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: ELLPQTSCDTGRKAERVLSDSSK*LEPCIK Trigger: TTTAATGCAAGGCTCCAATCACTTGGAGGAATCTGA...CAAAACCCTCTCTGCCTTCCTTCCCGTATCACAGCTGGTCTGTGGCAGTAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS-3UTR TCA 90 bp | CTGTCACCTGGCCTCCGCAGACAGTGTATCCCAATGAAGAACTCTACCCACGAATCAGATTCCTCCAAGTaGTTGGAGCCTTGCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPGLRRQCIPMKNSTHESDSSK*LEPCIK Trigger: TTTAATGCAAGGCTCCAATCACTTGGAGGAATCTGA...TTCGTGGGTAGAGTTCTTCATTGGGATACACTGTCTGCGGAGGCCAGGTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS-3UTR GCA 90 bp | CGCAGACAGTGTATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTCTCAAGGAGAGCAATaGATCTCATTAGCCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRQCIPMKNSTHEHLVCQSQGEQ*ISLATL Trigger: GAGAGTGGCTAATGAGATGCATTGCTCTCCTTGAGA...CTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGATACACTGTCTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS-3UTR CCA 90 bp | AAAGTGGGGAGCTGGGGGCCAGAGTTGTTGCTCAACTGTAGAGTGCTAAGCTTGAGGATATGTCCTGTGTaGATTTGCAGGTTTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KVGSWGPELLLNCRVLSLRICPV*ICRFCV Trigger: CACACAAAACCTGCAAATCCACACAGGACATATCCT...CAAGCTTAGCACTCTACAGTTGAGCAACAACTCTGGCCCCCAGCTCCCCACTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
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| CDS-3UTR CCA 90 bp | TCTGTCACCTGGCCTCCGCAGACAGTGTATCCCAATGAAGAACTCTACCCACGAATTCCTCCAAGTGATTaGAGCCTTGCATTAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: SVTWPPQTVYPNEELYPRIPPSD*SLALNT Trigger: CGTGTTTAATGCAAGGCTCCAATCACTTGGAGGAAT...TCGTGGGTAGAGTTCTTCATTGGGATACACTGTCTGCGGAGGCCAGGTGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS-3UTR TCA 90 bp | GTTGTGCTATTTAAAGGGGAGGGGGATAACAGACGACAAATCGCCTCAGCTTTTAGAGATCGATCATTGTaGTCCCCACGATGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVLFKGEGDNRRQIASAFRDRSL*SPRCRR Trigger: CCTTCTGCATCGTGGGGATCACAATGATCGATCTCT...AAAAGCTGAGGCGATTTGTCGTCTGTTATCCCCCTCCCCTTTAAATAGCACAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
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| CDS-3UTR TCA 90 bp | CCTGCCACCAAGTCTGACAATCTGAGTTCAATTCCTAGGACCCACACGGTAGGTTCAGATTCCTCCAAGTaGTTGGAGCCTTGCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PATKSDNLSSIPRTHTVGSDSSK*LEPCIK Trigger: TTTAATGCAAGGCTCCAATCACTTGGAGGAATCTGA...ACCTACCGTGTGGGTCCTAGGAATTGAACTCAGATTGTCAGACTTGGTGGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
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| CDS-3UTR GCA 90 bp | ACAGTGTATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTGCTGTTTTCAGTGTGTaGTCGGAGTGCCGTAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TVYPNEELYPRTPSVPVFAVFSV*SECRST Trigger: GGTACTACGGCACTCCGAGCACACACTGAAAACAGC...AAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGATACACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS-3UTR CCA 90 bp | CCTGCCACCAAGTCTGACAATCTGAGTTCAATTCCTAGGACCCACACGGTAGGTAGGATATGTCCTGTGTaGATTTGCAGGTTTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PATKSDNLSSIPRTHTVGRICPV*ICRFCV Trigger: CACACAAAACCTGCAAATCCACACAGGACATATCCT...ACCTACCGTGTGGGTCCTAGGAATTGAACTCAGATTGTCAGACTTGGTGGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CCA 90 bp | ATCAAAAGAAAGGGCCAGCGAGATGGCTCAGTAGGTGAAGTTGCCTGCCACCAAATTCCTCCAAGTGATTaGAGCCTTGCATTAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: IKRKGQRDGSVGEVACHQIPPSD*SLALNT Trigger: CGTGTTTAATGCAAGGCTCCAATCACTTGGAGGAAT...TTGGTGGCAGGCAACTTCACCTACTGAGCCATCTCGCTGGCCCTTTCTTTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CCA 90 bp | GTTGTTCTTAGTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCTGATTCCTCCAAGTGATTaGAGCCTTGCATTAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: VVLSEPCSCPRAQTSSSLIPPSD*SLALNT Trigger: CGTGTTTAATGCAAGGCTCCAATCACTTGGAGGAAT...CAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS-3UTR TCA 90 bp | ACAGTGTATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTAGAGATCGATCATTGTaGTCCCCACGATGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVYPNEELYPRTPSVPVFRDRSL*SPRCRR Trigger: CCTTCTGCATCGTGGGGATCACAATGATCGATCTCT...AAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGATACACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS-3UTR TCA 90 bp | ATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAGTATGCCCACACCACTTaGCAAGGAGGCCTGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IPMKNSTHEHLVCQYLFQYAHTT*QGGLSK Trigger: TTTGGACAGGCCTCCTTGTCAAGTGGTGTGGGCATA...CTGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | TTGTTGTTCTTAGTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCAATCCACTTCACCAGTaGTCTGTATCTCTCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLFLVNLVPAPGLRQALVNPLHQ*SVSLHN Trigger: ATTGTGGAGAGATACAGAGCACTGGTGAAGTGGATT...GACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTTTTGTTGTTCTTAGTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCTAGGATATGTCCTGTGTaGATTTGCAGGTTTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVLLFLVNLVPAPGLRQARICPV*ICRFCV Trigger: CACACAAAACCTGCAAATCCACACAGGACATATCCT...AGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAACAAAACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR TCA 90 bp | AACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAGTTACTCCTGTCTAGAGATCGATCATTGTaGTCCCCACGATGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSTHEHLVCQYLFQLLLSRDRSL*SPRCRR Trigger: CCTTCTGCATCGTGGGGATCACAATGATCGATCTCT...AGACAGGAGTAACTGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAGAAGCACTGGGTTCTTTaGGAGGAGAGCTGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPMKNSTHEHLVCQYLFQKHWVL*EESCFQ Trigger: CTGAAAACAGCTCTCCTCTCAAAGAACCCAGTGCTT...CTGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | ACGATTCTTCAGGTGTTGTTAAAGGCAATGTTGTGCTATTTAAAGGGGAGGGGGTGTCCTGTGTGGATTTaGAGGTTTTGTGTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TILQVLLKAMLCYLKGRGCPVWI*RFCVCS Trigger: TGAGCACACACAAAACCTGCAAATCCACACAGGACA...CCCCCTCCCCTTTAAATAGCACAACATTGCCTTTAACAACACCTGAAGAATCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR TCA 90 bp | TATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAAAGCACTGGGTTCTTTaGGAGGAGAGCTGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YPNEELYPRTPSVPVFISKHWVL*EESCFQ Trigger: CTGAAAACAGCTCTCCTCTCAAAGAACCCAGTGCTT...TGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTCTTTAAATGCTTCAGAGAGCTTTTCTGGTCTCATAATGTAAGTTTTGCTGTTTTCAGTGTGTaGTCGGAGTGCCGTAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: LWLFKCFRELFWSHNVSFAVFSV*SECRST Trigger: GGTACTACGGCACTCCGAGCACACACTGAAAACAGC...AAAACTTACATTATGAGACCAGAAAAGCTCTCTGAAGCATTTAAAGAGCCACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR GCA 90 bp | TGTGATACGGGAAGGAAGGCAGAGAGGGTTTTGTTGTTCTTAGTGAACCTTGTTCAAACCGTAGAAAAATaGTTCACAGTAGCCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CDTGRKAERVLLFLVNLVQTVEK*FTVALE Trigger: CTCAAGGGCTACTGTGAAGCATTTTTCTACGGTTTG...AACAAGGTTCACTAAGAACAACAAAACCCTCTCTGCCTTCCTTCCCGTATCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTGTATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTAATCCACTTCACCAGTaGTCTGTATCTCTCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: TVYPNEELYPRTPSVPVFNPLHQ*SVSLHN Trigger: ATTGTGGAGAGATACAGAGCACTGGTGAAGTGGATT...AAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGATACACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAGAAACAGGTTACTGCGTaGCTGGAAGGCTTCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IPMKNSTHEHLVCQYLFQKQVTA*LEGFIH Trigger: ATGAATGAAGCCTTCCAGCCACGCAGTAACCTGTTT...CTGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGTATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTAGGATATGTCCTGTGTaGATTTGCAGGTTTTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TVYPNEELYPRTPSVPVFRICPV*ICRFCV Trigger: CACACAAAACCTGCAAATCCACACAGGACATATCCT...AAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGATACACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| 3UTR CAA 72 bp | GTTGTAACGATTCTTCAGGTGTTGTTAAAGGCAATGTaGTGCTATTTAAAGGGGAGGGGGATAACAGACGAC | + |
|
Preference number: 4 (lower is better) Translates to: VVTILQVLLKAM*CYLKGRGITDD Trigger: GTCGTCTGTTATCCCCCTCCCCTTTAAATAGCACAACATTGCCTTTAACAACACCTGAAGAATCGTTACAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR GCA 90 bp | CTTCAGGTGTTGTTAAAGGCAATGTTGTGCTATTTAAAGGGGAGGGGGATAACACAAACCGTAGAAAAATaGTTCACAGTAGCCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQVLLKAMLCYLKGRGITQTVEK*FTVALE Trigger: CTCAAGGGCTACTGTGAAGCATTTTTCTACGGTTTG...TGTTATCCCCCTCCCCTTTAAATAGCACAACATTGCCTTTAACAACACCTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR GCA 90 bp | AACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAGTTACTCCTGTCTCAAACCGTAGAAAAATaGTTCACAGTAGCCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSTHEHLVCQYLFQLLLSQTVEK*FTVALE Trigger: CTCAAGGGCTACTGTGAAGCATTTTTCTACGGTTTG...AGACAGGAGTAACTGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAGTTACTCTGTCCTGTGTGGATTTaGAGGTTTTGTGTGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MKNSTHEHLVCQYLFQLLCPVWI*RFCVCS Trigger: TGAGCACACACAAAACCTGCAAATCCACACAGGACA...GAGTAACTGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | TGTGATACGGGAAGGAAGGCAGAGAGGGTTTTGTTGTTCTTAGTGAACCTTGTTATTCTTCTTCAAGAATaGCAGGATATGTCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CDTGRKAERVLLFLVNLVILLQE*QDMSCV Trigger: CACACAGGACATATCCTGGCATTCTTGAAGAAGAAT...AACAAGGTTCACTAAGAACAACAAAACCCTCTCTGCCTTCCTTCCCGTATCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAGATTCCTCCAAGTGATTaGAGCCTTGCATTAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: IPMKNSTHEHLVCQYLFQIPPSD*SLALNT Trigger: CGTGTTTAATGCAAGGCTCCAATCACTTGGAGGAAT...CTGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| 3UTR CAA 72 bp | TTTTCCACAGCCCAAGTTGTAACGATTCTTCAGGTGTaGTTAAAGGCAATGTTGTGCTATTTAAAGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSTAQVVTILQV*LKAMLCYLKGR Trigger: CCTCCCCTTTAAATAGCACAACATTGCCTTTAACAACACCTGAAGAATCGTTACAACTTGGGCTGTGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR TCA 90 bp | ATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAGTTACTCTCAGATTCCTCCAAGTaGTTGGAGCCTTGCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: MKNSTHEHLVCQYLFQLLSDSSK*LEPCIK Trigger: TTTAATGCAAGGCTCCAATCACTTGGAGGAATCTGA...GAGTAACTGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | TATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAATTCTTCTTCAAGAATaGCAGGATATGTCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YPNEELYPRTPSVPVFISILLQE*QDMSCV Trigger: CACACAGGACATATCCTGGCATTCTTGAAGAAGAAT...TGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTCTTTAAATGCTTCAGAGAGCTTTTCTGGTCTCATAATGTAAGTTTTATTCTTCTTCAAGAATaGCAGGATATGTCCTGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWLFKCFRELFWSHNVSFILLQE*QDMSCV Trigger: CACACAGGACATATCCTGGCATTCTTGAAGAAGAAT...AAAACTTACATTATGAGACCAGAAAAGCTCTCTGAAGCATTTAAAGAGCCACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CAA 90 bp | GTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCTGTCACCTGGCCCTGATGACTCTGGTGTaGCCTAGAGAGCCAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VNLVPAPGLRQALVCHLALMTLV*PREPMD Trigger: GTCCATTGGCTCTCTAGGCAACACCAGAGTCATCAG...GGCCAGGTGACAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | CCATCGCTTCCTGCAGGGACAGGCTCAGAAATGGCCAGGAAAGAGTGCAGGGCACTGATGACTCTGGTGTaGCCTAGAGAGCCAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSLPAGTGSEMARKECRALMTLV*PREPMD Trigger: GTCCATTGGCTCTCTAGGCAACACCAGAGTCATCAG...TGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCTGCAGGAAGCGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | GTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCTGTCACCTGGCCATATGCCCACACCACTaGACAAGGAGGCCTGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: VNLVPAPGLRQALVCHLAICPHH*TRRPVQ Trigger: TTGGACAGGCCTCCTTGTCAAGTGGTGTGGGCATAT...GGCCAGGTGACAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCTGTCACCTGGCCTCCGCAGAGTGGATTTGCAGGTTTaGTGTGTGCTCATTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSCPRAQTSSSLSPGLRRVDLQV*CVLIHS Trigger: AGAGTGAATGAGCACACACAAAACCTGCAAATCCAC...TCTGCGGAGGCCAGGTGACAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAGTTGCCTGCCACCAAGTCTGACAATCTGAGTTCAATTCCTAGGACCCACAAACTGCTCAAAGTCTaGGGGAGCCTCGGGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VKLPATKSDNLSSIPRTHKLLKV*GSLGVG Trigger: TCCCACCCCGAGGCTCCCCAAGACTTTGAGCAGTTT...GTGGGTCCTAGGAATTGAACTCAGATTGTCAGACTTGGTGGCAGGCAACTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CAA 90 bp | CTGTCACCTGGCCTCCGCAGACAGTGTATCCCAATGAAGAACTCTACCCACGAAATATGCCCACACCACTaGACAAGGAGGCCTGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSPGLRRQCIPMKNSTHEICPHH*TRRPVQ Trigger: TTGGACAGGCCTCCTTGTCAAGTGGTGTGGGCATAT...TTCGTGGGTAGAGTTCTTCATTGGGATACACTGTCTGCGGAGGCCAGGTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCCACCAAGTCTGACAATCTGAGTTCAATTCCTAGGACCCACACGGTAGGTCTGATGACTCTGGTGTaGCCTAGAGAGCCAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PATKSDNLSSIPRTHTVGLMTLV*PREPMD Trigger: GTCCATTGGCTCTCTAGGCAACACCAGAGTCATCAG...ACCTACCGTGTGGGTCCTAGGAATTGAACTCAGATTGTCAGACTTGGTGGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CAA 90 bp | CCATCGCTTCCTGCAGGGACAGGCTCAGAAATGGCCAGGAAAGAGTGCAGGGCAACTCTAAAGGAACACTaGGTTTCAGAGACCGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: PSLPAGTGSEMARKECRATLKEH*VSETET Trigger: TGTTTCGGTCTCTGAAACCAAGTGTTCCTTTAGAGT...TGCCCTGCACTCTTTCCTGGCCATTTCTGAGCCTGTCCCTGCAGGAAGCGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGCTCAGACAAGCTCTAGTCTGTCACCTGGCCTCCGCAGACAGTGTATCACTCTAAAGGAACACTaGGTTTCAGAGACCGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: PRAQTSSSLSPGLRRQCITLKEH*VSETET Trigger: TGTTTCGGTCTCTGAAACCAAGTGTTCCTTTAGAGT...GATACACTGTCTGCGGAGGCCAGGTGACAGACTAGAGCTTGTCTGAGCCCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCACCTGGCCTCCGCAGACAGTGTATCCCAATGAAGAACTCTACCCACGAACAAGCACTGGGTTCTTaGAGAGGAGAGCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LSPGLRRQCIPMKNSTHEQALGS*RGELFS Trigger: TGAAAACAGCTCTCCTCTCAAAGAACCCAGTGCTTG...TTCGTGGGTAGAGTTCTTCATTGGGATACACTGTCTGCGGAGGCCAGGTGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTACTGCCACAGACCAGCTGTGATACGGGAAGGAAGGCAGAGAGGGTTTTGATGTCCTGTGTGGATTaGCAGGTTTTGTGTGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ELLPQTSCDTGRKAERVLMSCVD*QVLCVL Trigger: GAGCACACACAAAACCTGCAAATCCACACAGGACAT...CAAAACCCTCTCTGCCTTCCTTCCCGTATCACAGCTGGTCTGTGGCAGTAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTACTGCCACAGACCAGCTGTGATACGGGAAGGAAGGCAGAGAGGGTTTTGTATCTCTCCACAATATaGAAGCCAATGGCACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ELLPQTSCDTGRKAERVLYLSTI*KPMALC Trigger: GCAGAGTGCCATTGGCTTCAATATTGTGGAGAGATA...CAAAACCCTCTCTGCCTTCCTTCCCGTATCACAGCTGGTCTGTGGCAGTAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCACCTGGCCTCCGCAGACAGTGTATCCCAATGAAGAACTCTACCCACGAATATCTCTCCACAATATaGAAGCCAATGGCACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSPGLRRQCIPMKNSTHEYLSTI*KPMALC Trigger: GCAGAGTGCCATTGGCTTCAATATTGTGGAGAGATA...TTCGTGGGTAGAGTTCTTCATTGGGATACACTGTCTGCGGAGGCCAGGTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAGTTGCCTGCCACCAAGTCTGACAATCTGAGTTCAATTCCTAGGACCCACCAAGCACTGGGTTCTTaGAGAGGAGAGCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VKLPATKSDNLSSIPRTHQALGS*RGELFS Trigger: TGAAAACAGCTCTCCTCTCAAAGAACCCAGTGCTTG...GTGGGTCCTAGGAATTGAACTCAGATTGTCAGACTTGGTGGCAGGCAACTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CAA 90 bp | TTGTTGTTCTTAGTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCCAAGCACTGGGTTCTTaGAGAGGAGAGCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLFLVNLVPAPGLRQALVQALGS*RGELFS Trigger: TGAAAACAGCTCTCCTCTCAAAGAACCCAGTGCTTG...GACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGTAGCAAACACCTTCAGTCCCAGCTCTTGAGAGGCAGAGGAAGGGGTTCTACTCTAAAGGAACACTaGGTTTCAGAGACCGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: CGSKHLQSQLLRGRGRGSTLKEH*VSETET Trigger: TGTTTCGGTCTCTGAAACCAAGTGTTCCTTTAGAGT...AGAACCCCTTCCTCTGCCTCTCAAGAGCTGGGACTGAAGGTGTTTGCTACCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | GTTGTTCTTAGTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCTCTAGTCTGGTGGATTTGCAGGTTTaGTGTGTGCTCATTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVLSEPCSCPRAQTSSSLVDLQV*CVLIHS Trigger: AGAGTGAATGAGCACACACAAAACCTGCAAATCCAC...CAGACTAGAGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTTTTGTTGTTCTTAGTGAACCTTGTTCCTGCCCCAGGGCTCAGACAAGCTATGTCCTGTGTGGATTaGCAGGTTTTGTGTGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RVLLFLVNLVPAPGLRQAMSCVD*QVLCVL Trigger: GAGCACACACAAAACCTGCAAATCCACACAGGACAT...AGCTTGTCTGAGCCCTGGGGCAGGAACAAGGTTCACTAAGAACAACAAAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | TGTGATACGGGAAGGAAGGCAGAGAGGGTTTTGTTGTTCTTAGTGAACCTTGTTCTGATGACTCTGGTGTaGCCTAGAGAGCCAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CDTGRKAERVLLFLVNLVLMTLV*PREPMD Trigger: GTCCATTGGCTCTCTAGGCAACACCAGAGTCATCAG...AACAAGGTTCACTAAGAACAACAAAACCCTCTCTGCCTTCCTTCCCGTATCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAGTTGCCTGCCACCAAGTCTGACAATCTGAGTTCAATTCCTAGGACCCACTATCTCTCCACAATATaGAAGCCAATGGCACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VKLPATKSDNLSSIPRTHYLSTI*KPMALC Trigger: GCAGAGTGCCATTGGCTTCAATATTGTGGAGAGATA...GTGGGTCCTAGGAATTGAACTCAGATTGTCAGACTTGGTGGCAGGCAACTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CAA 90 bp | ACGATTCTTCAGGTGTTGTTAAAGGCAATGTTGTGCTATTTAAAGGGGAGGGGGATGTCCTGTGTGGATTaGCAGGTTTTGTGTGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TILQVLLKAMLCYLKGRGMSCVD*QVLCVL Trigger: GAGCACACACAAAACCTGCAAATCCACACAGGACAT...CCCCCTCCCCTTTAAATAGCACAACATTGCCTTTAACAACACCTGAAGAATCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CAA 90 bp | ATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAGCAAGCACTGGGTTCTTaGAGAGGAGAGCTGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IPMKNSTHEHLVCQYLFQQALGS*RGELFS Trigger: TGAAAACAGCTCTCCTCTCAAAGAACCCAGTGCTTG...CTGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | TGTAACGATTCTTCAGGTGTTGTTAAAGGCAATGTTGTGCTATTTAAAGGGGAGATATGCCCACACCACTaGACAAGGAGGCCTGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CNDSSGVVKGNVVLFKGEICPHH*TRRPVQ Trigger: TTGGACAGGCCTCCTTGTCAAGTGGTGTGGGCATAT...CTCCCCTTTAAATAGCACAACATTGCCTTTAACAACACCTGAAGAATCGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CAA 90 bp | TATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAATGTCCTGTGTGGATTaGCAGGTTTTGTGTGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YPNEELYPRTPSVPVFISMSCVD*QVLCVL Trigger: GAGCACACACAAAACCTGCAAATCCACACAGGACAT...TGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | AAAACAGTACTACAAATAAGGAATATGCTGCCAGGTCACTTTCTGTTTTCCAAGATATGCCCACACCACTaGACAAGGAGGCCTGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KTVLQIRNMLPGHFLFSKICPHH*TRRPVQ Trigger: TTGGACAGGCCTCCTTGTCAAGTGGTGTGGGCATAT...CTTGGAAAACAGAAAGTGACCTGGCAGCATATTCCTTATTTGTAGTACTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092500.11 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCAGTTACTCGTGGATTTGCAGGTTTaGTGTGTGCTCATTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: MKNSTHEHLVCQYLFQLLVDLQV*CVLIHS Trigger: AGAGTGAATGAGCACACACAAAACCTGCAAATCCAC...GAGTAACTGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | TATCCCAATGAAGAACTCTACCCACGAACACCTAGTGTGCCAGTATTTATTTCATATCTCTCCACAATATaGAAGCCAATGGCACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YPNEELYPRTPSVPVFISYLSTI*KPMALC Trigger: GCAGAGTGCCATTGGCTTCAATATTGTGGAGAGATA...TGAAATAAATACTGGCACACTAGGTGTTCGTGGGTAGAGTTCTTCATTGGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
||
| CDS-3UTR CAA 90 bp | CTGTGGCTCTTTAAATGCTTCAGAGAGCTTTTCTGGTCTCATAATGTAAGTTTTGTGGATTTGCAGGTTTaGTGTGTGCTCATTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWLFKCFRELFWSHNVSFVDLQV*CVLIHS Trigger: AGAGTGAATGAGCACACACAAAACCTGCAAATCCAC...AAAACTTACATTATGAGACCAGAAAAGCTCTCTGAAGCATTTAAAGAGCCACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS-3UTR CAA 90 bp | CTGTGGCTCTTTAAATGCTTCAGAGAGCTTTTCTGGTCTCATAATGTAAGTTTTACTCTAAAGGAACACTaGGTTTCAGAGACCGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LWLFKCFRELFWSHNVSFTLKEH*VSETET Trigger: TGTTTCGGTCTCTGAAACCAAGTGTTCCTTTAGAGT...AAAACTTACATTATGAGACCAGAAAAGCTCTCTGAAGCATTTAAAGAGCCACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
||
| CDS TCA 72 bp | CAAACATTCAGAGGACGCCGGTCAGATTCCTCCAAGTaGTTGGAGCCTTGCATTAAACACGCAAGCCACTGG | + |
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Preference number: 6 (lower is better) Translates to: QTFRGRRSDSSK*LEPCIKHASHW Trigger: CCAGTGGCTTGCGTGTTTAATGCAAGGCTCCAATCACTTGGAGGAATCTGACCGGCGTCCTCTGAATGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020929.17 ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS CAA 72 bp | TCGGCAAATGCGCATGCTCAGAACTACTTTTCGGAGTaGCTCCTGATTCGTTGCAAGATTCGTCGTCAATCC | + |
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Preference number: 6 (lower is better) Translates to: SANAHAQNYFSE*LLIRCKIRRQS Trigger: GGATTGACGACGAATCTTGCAACGAATCAGGAGCAACTCCGAAAAGTAGTTCTGAGCATGCGCATTTGCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS TCA 72 bp | TCCACTTCACCAGTGCTCTGTATCTCTCCACAATATTaGAGCCAATGGCACTCTGCAGCTTTCGTAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: STSPVLCISPQY*SQWHSAAFVSR Trigger: TCTGCTTACGAAAGCTGCAGAGTGCCATTGGCTTCAATATTGTGGAGAGATACAGAGCACTGGTGAAGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS CAA 72 bp | ATCCACTTCACCAGTGCTCTGTATCTCTCCACAATATaGAAGCCAATGGCACTCTGCAGCTTTCGTAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: IHFTSALYLSTI*KPMALCSFRKQ Trigger: CTGCTTACGAAAGCTGCAGAGTGCCATTGGCTTCAATATTGTGGAGAGATACAGAGCACTGGTGAAGTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS CCA 72 bp | CAGGGATGTAATAGTTATCAAAAATGGAGTAGTCAGTaGGAGACGTTAGCTGCAGAGACGTCACATTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: QGCNSYQKWSSQ*ETLAAETSHCL Trigger: AAGGCAATGTGACGTCTCTGCAGCTAACGTCTCCCACTGACTACTCCATTTTTGATAACTATTACATCCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020929.17 ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS TCA 72 bp | GCCTTTCTTCATTCATTCTGTATCTCTCCACAATATTaGAGCCAATGGCACTCTGCAGCTTTCGTAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: AFLHSFCISPQY*SQWHSAAFVSR Trigger: TCTGCTTACGAAAGCTGCAGAGTGCCATTGGCTTCAATATTGTGGAGAGATACAGAATGAATGAAGAAAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
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| CDS CAA 72 bp | AGCCTTTCTTCATTCATTCTGTATCTCTCCACAATATaGAAGCCAATGGCACTCTGCAGCTTTCGTAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SLSSFILYLSTI*KPMALCSFRKQ Trigger: CTGCTTACGAAAGCTGCAGAGTGCCATTGGCTTCAATATTGTGGAGAGATACAGAATGAATGAAGAAAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020929.17 |
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| CDS GCA 72 bp | GGACTGAATGTAGATTATATGTTTCTTTGGACAGGGTaGCTTTCTGTAGCGGTCAGAGAAAAACTGCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GLNVDYMFLWTG*LSVAVREKLLK Trigger: TTTGAGCAGTTTTTCTCTGACCGCTACAGAAAGGCACCCTGTCCAAAGAAACATATAATCTACATTCAGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020929.17 ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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| CDS CCA 72 bp | AGAGCCAATGGACTGAATGTAGATTATATGTTTCTTTaGACAGGGTGCCTTTCTGTAGCGGTCAGAGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: RANGLNVDYMFL*TGCLSVAVREK Trigger: TTTTTCTCTGACCGCTACAGAAAGGCACCCTGTCCAAAGAAACATATAATCTACATTCAGTCCATTGGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020929.17 ENSMUST00000092500.11 ENSMUST00000103061.3 ENSMUST00000238825.2 |
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