Pregenerated sensors for AMY2A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074268Ensembl transcript IDs: ENSMUST00000098673.5
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCTATAGCTCCAGCAGAATCACCCTGCTCTACCAGGTCAGGCCCTaGGGCAGACCACCAACATTTCCTCAGAGCCTGTGGAACTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: TYSSSRITLLYQVRP*GRPPTFPQSLWNFP Trigger: GGGAAAGTTCCACAGGCTCTGAGGAAATGTTGGTGGTCTGCCTCAGGGCCTGACCTGGTAGAGCAGGGTGATTCTGCTGGAGCTATAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR TCA 90 bp | CCATACCACAATTCTGGCAGAAGCTCTTTGCTCTACCAGAGACCATaGCTTATCCAGAATCCCAGGTTATGCCAGTTCCTAAAACCCCAG | + |
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Preference number: 1 (lower is better) Translates to: PYHNSGRSSLLYQRP*LIQNPRLCQFLKPQ Trigger: CTGGGGTTTTAGGAACTGGCATAACCTGGGATTCTGGATAAGTCATGGTCTCTGGTAGAGCAAAGAGCTTCTGCCAGAATTGTGGTATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR GCA 90 bp | AAAGTACATATGAGCCAGCAACATAGCACAGCAGGTACAAGTGCATaGTTTCCAGGTCTCCATATCCTGACCTATAGCTCCAGCAGAATC | + |
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Preference number: 1 (lower is better) Translates to: KVHMSQQHSTAGTSA*FPGLHILTYSSSRI Trigger: GATTCTGCTGGAGCTATAGGTCAGGATATGGAGACCTGGAAAGCATGCACTTGTACCTGCTGTGCTATGTTGCTGGCTCATATGTACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR CCA 90 bp | CAACTTGACACAGGCTGGAGTTATCTCAGAGAAAGGAGATTCAATTaGGGAAATGCCTCCATGAGATCCACCTGCAATGCATTTTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: QLDTGWSYLRERRFN*GNASMRSTCNAFSQ Trigger: TTGAGAAAATGCATTGCAGGTGGATCTCATGGAGGCATTTCCCCAATTGAATCTCCTTTCTCTGAGATAACTCCAGCCTGTGTCAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR GCA 90 bp | AGAGAAAGGAGATTCAATTGGGGAAATGCCTCCATGAGATCCACCTaGAATGCATTTTCTCAATTAGTGATCAAGCAGGGAGGTTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: RERRFNWGNASMRST*NAFSQLVIKQGGSF Trigger: AAAGGAACCTCCCTGCTTGATCACTAATTGAGAAAATGCATTGCAGGTGGATCTCATGGAGGCATTTCCCCAATTGAATCTCCTTTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR GCA 90 bp | CACAGGCTGGAGTTATCTCAGAGAAAGGAGATTCAATTGGGGAAATaGCTCCATGAGATCCACCTGCAATGCATTTTCTCAATTAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: HRLELSQRKEIQLGK*LHEIHLQCIFSISD Trigger: ATCACTAATTGAGAAAATGCATTGCAGGTGGATCTCATGGAGGCATTTCCCCAATTGAATCTCCTTTCTCTGAGATAACTCCAGCCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR CAA 90 bp | CACAGCTCATGGGAAAATGTAGAGAGGTTATGCCACAGCACAGGGTaGTTTAAACATGCTACATACACTCCAGAGCTCAGAAGACAAAGC | + |
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Preference number: 2 (lower is better) Translates to: HSSWENVERLCHSTG*FKHATYTPELRRQS Trigger: GCTTTGTCTTCTGAGCTCTGGAGTGTATGTAGCATGTTTAAACAACCCTGTGCTGTGGCATAACCTCTCTACATTTTCCCATGAGCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR-3UTR GCA 90 bp | ACAAGCTGCCAAATCCCCAGCAGAGACATTCTACTGAACAAGGGTCTCCCTGATTCCATGAGATCCACCTaGAATGCATTTTCTCAATTA | + |
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Preference number: 2 (lower is better) Translates to: TSCQIPSRDILLNKGLPDSMRST*NAFSQL Trigger: TAATTGAGAAAATGCATTGCAGGTGGATCTCATGGA...ATCAGGGAGACCCTTGTTCAGTAGAATGTCTCTGCTGGGGATTTGGCAGCTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR CCA 72 bp | GCCAGGGGAGACAAGCCAGTAAAGAACATCACTCCATaGCCTTGCATCAGCTCCTGCTTCCTGACCTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: ARGDKPVKNITP*PCISSCFLTCL Trigger: CAAGCAGGTCAGGAAGCAGGAGCTGATGCAAGGCCATGGAGTGATGTTCTTTACTGGCTTGTCTCCCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR TCA 72 bp | ACACAAGCTGCCAAATCCCCAGCAGAGACATTCTACTaGACAAGGGTCTCCCTGATCACAAGAACCACAGGC | + |
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Preference number: 3 (lower is better) Translates to: TQAAKSPAETFY*TRVSLITRTTG Trigger: GCCTGTGGTTCTTGTGATCAGGGAGACCCTTGTTCAGTAGAATGTCTCTGCTGGGGATTTGGCAGCTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR TCA 72 bp | CAAGCAGGGAGGTTCCTTTGTGGGTGGTGCCATCTCTaGGCTGATAGTCTTGGTTCTATAAGAGAACAGGCT | + |
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Preference number: 3 (lower is better) Translates to: QAGRFLCGWCHL*ADSLGSIREQA Trigger: AGCCTGTTCTCTTATAGAACCAAGACTATCAGCTCAGAGATGGCACCACCCACAAAGGAACCTCCCTGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR GCA 72 bp | AACCCCAGTACCCTAAACACCAGAGGTCACACAAGCTaGCAAATCCCCAGCAGAGACATTCTACTGAACAAG | + |
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Preference number: 3 (lower is better) Translates to: NPSTLNTRGHTS*QIPSRDILLNK Trigger: CTTGTTCAGTAGAATGTCTCTGCTGGGGATTTGGCAGCTTGTGTGACCTCTGGTGTTTAGGGTACTGGGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR CCA 72 bp | ACATTTCCTCAGAGCCTGTGGAACTTTCCCCAACAGTaGCCCCTTCACTCATATCCATGTCCCATACCACAA | + |
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Preference number: 3 (lower is better) Translates to: TFPQSLWNFPQQ*PLHSYPCPIPQ Trigger: TTGTGGTATGGGACATGGATATGAGTGAAGGGGCCACTGTTGGGGAAAGTTCCACAGGCTCTGAGGAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR CCA 72 bp | ACAGGCTGGAGTTATCTCAGAGAAAGGAGATTCAATTaGGGAAATGCCTCCATGAGATCCACCTGCAATGCA | + |
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Preference number: 3 (lower is better) Translates to: TGWSYLRERRFN*GNASMRSTCNA Trigger: TGCATTGCAGGTGGATCTCATGGAGGCATTTCCCCAATTGAATCTCCTTTCTCTGAGATAACTCCAGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR TCA 72 bp | AATTCTGGCAGAAGCTCTTTGCTCTACCAGAGACCATaGCTTATCCAGAATCCCAGGTTATGCCAGTTCCTA | + |
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Preference number: 3 (lower is better) Translates to: NSGRSSLLYQRP*LIQNPRLCQFL Trigger: TAGGAACTGGCATAACCTGGGATTCTGGATAAGTCATGGTCTCTGGTAGAGCAAAGAGCTTCTGCCAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR GCA 72 bp | CAATTGGGGAAATGCCTCCATGAGATCCACCTGCAATaGATTTTCTCAATTAGTGATCAAGCAGGGAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: QLGKCLHEIHLQ*IFSISDQAGRF Trigger: GAACCTCCCTGCTTGATCACTAATTGAGAAAATGCATTGCAGGTGGATCTCATGGAGGCATTTCCCCAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR GCA 72 bp | GATCAGCACAGCTCATGGGAAAATGTAGAGAGGTTATaGCACAGCACAGGGTTGTTTAAACATGCTACATAC | + |
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Preference number: 3 (lower is better) Translates to: DQHSSWENVERL*HSTGLFKHATY Trigger: GTATGTAGCATGTTTAAACAACCCTGTGCTGTGGCATAACCTCTCTACATTTTCCCATGAGCTGTGCTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR GCA 72 bp | AGATTCAATTGGGGAAATGCCTCCATGAGATCCACCTaGAATGCATTTTCTCAATTAGTGATCAAGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: RFNWGNASMRST*NAFSQLVIKQG Trigger: TCCCTGCTTGATCACTAATTGAGAAAATGCATTGCAGGTGGATCTCATGGAGGCATTTCCCCAATTGAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR GCA 72 bp | GAGTTATCTCAGAGAAAGGAGATTCAATTGGGGAAATaGCTCCATGAGATCCACCTGCAATGCATTTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: ELSQRKEIQLGK*LHEIHLQCIFS Trigger: TGAGAAAATGCATTGCAGGTGGATCTCATGGAGGCATTTCCCCAATTGAATCTCCTTTCTCTGAGATAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR CCA 72 bp | TTGTACTGGCTAGTTTTGTGTCAACTTGACACAGGCTaGAGTTATCTCAGAGAAAGGAGATTCAATTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: LYWLVLCQLDTG*SYLRERRFNWG Trigger: TCCCCAATTGAATCTCCTTTCTCTGAGATAACTCCAGCCTGTGTCAAGTTGACACAAAACTAGCCAGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR TCA 72 bp | AAGTTTATTGTTGTACTGGCTAGTTTTGTGTCAACTTaGCACAGGCTGGAGTTATCTCAGAGAAAGGAGATT | + |
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Preference number: 3 (lower is better) Translates to: KFIVVLASFVST*HRLELSQRKEI Trigger: AATCTCCTTTCTCTGAGATAACTCCAGCCTGTGTCAAGTTGACACAAAACTAGCCAGTACAACAATAAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR GCA 72 bp | ATGACACTAAAATGCTTCTGTACACCAAACAAAGAATaGCATCAACTGAGTAACAAGATAGGTTACAATATG | + |
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Preference number: 3 (lower is better) Translates to: MTLKCFCTPNKE*HQLSNKIGYNM Trigger: CATATTGTAACCTATCTTGTTACTCAGTTGATGGCATTCTTTGTTTGGTGTACAGAAGCATTTTAGTGTCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR CAA 72 bp | CCATGGCCTTGCATCAGCTCCTGCTTCCTGACCTGCTaGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAG | + |
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Preference number: 4 (lower is better) Translates to: PWPCISSCFLTC*SSSPDFLGDEQ Trigger: CTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAAGGCCATGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR CAA 72 bp | TGGGAAAATGTAGAGAGGTTATGCCACAGCACAGGGTaGTTTAAACATGCTACATACACTCCAGAGCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: WENVERLCHSTG*FKHATYTPELR Trigger: TCTGAGCTCTGGAGTGTATGTAGCATGTTTAAACAACCCTGTGCTGTGGCATAACCTCTCTACATTTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| CDS-3UTR CCA 90 bp | AACTTGACACAGGCTGGAGTTATCTCAGAGAAAGGAGATTCAATTGGGGAAATGAGATCAATGACCTCTTaGAAAATGAAAGGTCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: NLTQAGVISEKGDSIGEMRSMTS*KMKGLL Trigger: AAGCAGACCTTTCATTTTCCAAGAGGTCATTGATCT...CATTTCCCCAATTGAATCTCCTTTCTCTGAGATAACTCCAGCCTGTGTCAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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| 3UTR CAA 72 bp | TTTGCCTATTCAAGTTTATTGTTGTACTGGCTAGTTTaGTGTCAACTTGACACAGGCTGGAGTTATCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: FAYSSLLLYWLV*CQLDTGWSYLR Trigger: TCTGAGATAACTCCAGCCTGTGTCAAGTTGACACAAAACTAGCCAGTACAACAATAAACTTGAATAGGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098673.5 |
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