Pregenerated sensors for AMY2A4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096770

Ensembl transcript IDs: ENSMUST00000179568.3

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	ATAGCACAGCAGGTACAAGTGCATGCCTTCCAGGTCTCCATATCTTaGCCCATAGCTCCAGCAGAATCACCCTGCTCTATCAGGTCAGGC	+
Preference number: 1 (lower is better) Translates to: IAQQVQVHAFQVSIS*PIAPAESPCSIRSG Trigger: GCCTGACCTGATAGAGCAGGGTGATTCTGCTGGAGCTATGGGTCAAGATATGGAGACCTGGAAGGCATGCACTTGTACCTGCTGTGCTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179568.3
3UTR TCA 90 bp	ATTAGTGATCAAGCAGGGAGGTTCCTTTGTGGGTGGTGCCATCTCTaGGCTGATAGTCTTGGTTCTATAAGAGAACAGGCTGAGCAAGCC	+
Preference number: 1 (lower is better) Translates to: ISDQAGRFLCGWCHL*ADSLGSIREQAEQA Trigger: GGCTTGCTCAGCCTGTTCTCTTATAGAACCAAGACTATCAGCTCAGAGATGGCACCACCCACAAAGGAACCTCCCTGCTTGATCACTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179568.3
3UTR TCA 90 bp	CCATACCACAACTCTGGCAGAAGCTCTTTGCTCTACCAGAGACAATaGCTTATCCAGAATCCAAGGTTATGCCAGTTCCTAAAACCCCAG	+
Preference number: 1 (lower is better) Translates to: PYHNSGRSSLLYQRQ*LIQNPRLCQFLKPQ Trigger: CTGGGGTTTTAGGAACTGGCATAACCTTGGATTCTGGATAAGTCATTGTCTCTGGTAGAGCAAAGAGCTTCTGCCAGAGTTGTGGTATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179568.3
3UTR TCA 90 bp	AGTCCTGACTTCCTTGGTGATGAACAGCAGTATAGAAGTTTAAGCTaGATAAACCCTTTCCTTCCCAACTTGCTTCTTGGTCATGATGTT	+
Preference number: 1 (lower is better) Translates to: SPDFLGDEQQYRSLS*INPFLPNLLLGHDV Trigger: AACATCATGACCAAGAAGCAAGTTGGGAAGGAAAGGGTTTATTCAGCTTAAACTTCTATACTGCTGTTCATCACCAAGGAAGTCAGGACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179568.3
3UTR CAA 90 bp	TTTAAGATATTTGCCTATTCAAGTTTATTGTTGTACTGGCTAGTTTaGTGTCAACTTGACACAGGCTGGAGTTATCTCAGAGAAAAGAGA	+
Preference number: 2 (lower is better) Translates to: FKIFAYSSLLLYWLV*CQLDTGWSYLREKR Trigger: TCTCTTTTCTCTGAGATAACTCCAGCCTGTGTCAAGTTGACACAAAACTAGCCAGTACAACAATAAACTTGAATAGGCAAATATCTTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179568.3
3UTR TCA 72 bp	TCCAGCAGAATCACCCTGCTCTATCAGGTCAGGCCCTaGGGCAGACCACCAACATTTCCTCAGAGCCTGTGG	+
Preference number: 3 (lower is better) Translates to: SSRITLLYQVRP*GRPPTFPQSLW Trigger: CCACAGGCTCTGAGGAAATGTTGGTGGTCTGCCTCAGGGCCTGACCTGATAGAGCAGGGTGATTCTGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179568.3
3UTR TCA 72 bp	AACTCTGGCAGAAGCTCTTTGCTCTACCAGAGACAATaGCTTATCCAGAATCCAAGGTTATGCCAGTTCCTA	+
Preference number: 3 (lower is better) Translates to: NSGRSSLLYQRQ*LIQNPRLCQFL Trigger: TAGGAACTGGCATAACCTTGGATTCTGGATAAGTCATTGTCTCTGGTAGAGCAAAGAGCTTCTGCCAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179568.3
3UTR TCA 72 bp	TTCCTTGGTGATGAACAGCAGTATAGAAGTTTAAGCTaGATAAACCCTTTCCTTCCCAACTTGCTTCTTGGT	+
Preference number: 3 (lower is better) Translates to: FLGDEQQYRSLS*INPFLPNLLLG Trigger: ACCAAGAAGCAAGTTGGGAAGGAAAGGGTTTATTCAGCTTAAACTTCTATACTGCTGTTCATCACCAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179568.3
3UTR TCA 72 bp	AAGTTTATTGTTGTACTGGCTAGTTTTGTGTCAACTTaGCACAGGCTGGAGTTATCTCAGAGAAAAGAGATT	+
Preference number: 3 (lower is better) Translates to: KFIVVLASFVST*HRLELSQRKEI Trigger: AATCTCTTTTCTCTGAGATAACTCCAGCCTGTGTCAAGTTGACACAAAACTAGCCAGTACAACAATAAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000179568.3