RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMY2A2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096569

Ensembl transcript IDs: ENSMUST00000098667.5

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGCCAGAGGAGACAAGCCAGTAAAGAACATCACTCCATGGCCTTaGATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTGAC +
Preference number: 1 (lower is better)
Translates to: QARGDKPVKNITPWP*ISSCFLTCLSSSPD
Trigger: GTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAAGGCCATGGAGTGATGTTCTTTACTGGCTTGTCTCCTCTGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
3UTR CCA 90 bp GCTGAGCAAGCCAGAGGAGACAAGCCAGTAAAGAACATCACTCCATaGCCTTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGT +
Preference number: 1 (lower is better)
Translates to: AEQARGDKPVKNITP*PCISSCFLTCLSSS
Trigger: ACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAAGGCCATGGAGTGATGTTCTTTACTGGCTTGTCTCCTCTGGCTTGCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
3UTR GCA 90 bp AAGAACATCACTCCATGGCCTTGCATCAGCTCCTGCTTCCTGACCTaGTTGAGTTCCAGTCCTGACTTCCTTGGTGATGAACAGCAGTAT +
Preference number: 1 (lower is better)
Translates to: KNITPWPCISSCFLT*LSSSPDFLGDEQQY
Trigger: ATACTGCTGTTCATCACCAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAAGGCCATGGAGTGATGTTCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
3UTR GCA 90 bp TCACTCATCTCCATGTCCCATACCACAACTCTGGCAGAAGCTCTTTaGTCTACCAGAGACAATGACTTATCCAGAATCCAAGGTTATGCC +
Preference number: 1 (lower is better)
Translates to: SLISMSHTTTLAEAL*STRDNDLSRIQGYA
Trigger: GGCATAACCTTGGATTCTGGATAAGTCATTGTCTCTGGTAGAGCAAAGAGCTTCTGCCAGAGTTGTGGTATGGGACATGGAGATGAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
3UTR CCA 90 bp CAACTTGACACAGGCTGGAGTTATCTCAGAGAAAAGAGATTCAATTaGGGAAATGCCTCCATGAGATCCAGCTGCAATGCATTTTCTCAA +
Preference number: 1 (lower is better)
Translates to: QLDTGWSYLREKRFN*GNASMRSSCNAFSQ
Trigger: TTGAGAAAATGCATTGCAGCTGGATCTCATGGAGGCATTTCCCCAATTGAATCTCTTTTCTCTGAGATAACTCCAGCCTGTGTCAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
3UTR CCA 90 bp TATGTGAGTTTTAAGATATTTGCCTATTCAAGTTTATTGTTGTACTaGCTAGTTTTGTGTCAACTTGACACAGGCTGGAGTTATCTCAGA +
Preference number: 1 (lower is better)
Translates to: YVSFKIFAYSSLLLY*LVLCQLDTGWSYLR
Trigger: TCTGAGATAACTCCAGCCTGTGTCAAGTTGACACAAAACTAGCCAGTACAACAATAAACTTGAATAGGCAAATATCTTAAAACTCACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
3UTR-3UTR TCA 90 bp GCTGATAGTCTTGGTTCTATAAGAGAACAGGCTGAGCAAGCCAGAGGAGACAAGCTCATGGATTTAGTTTaGTCAGCACAGCTCATGGGA +
Preference number: 2 (lower is better)
Translates to: ADSLGSIREQAEQARGDKLMDLV*SAQLMG
Trigger: TCCCATGAGCTGTGCTGATCAAACTAAATCCATGAG...CTTGTCTCCTCTGGCTTGCTCAGCCTGTTCTCTTATAGAACCAAGACTATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
3UTR-3UTR TCA 90 bp AAGCCAGTAAAGAACATCACTCCATGGCCTTGCATCAGCTCCTGCTTCCTGACCTATAGAAGTTTAAGCTaGATAAACCCTTTCCTTCCC +
Preference number: 2 (lower is better)
Translates to: KPVKNITPWPCISSCFLTYRSLS*INPFLP
Trigger: GGGAAGGAAAGGGTTTATTCAGCTTAAACTTCTATA...GGTCAGGAAGCAGGAGCTGATGCAAGGCCATGGAGTGATGTTCTTTACTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
3UTR-3UTR TCA 90 bp GCCTATTCAAGTTTATTGTTGTACTGGCTAGTTTTGTGTCAACTTGACACAGGCCTTGCTTCTTGGTCATaGTGTTTGTGCAGGAATAGA +
Preference number: 2 (lower is better)
Translates to: AYSSLLLYWLVLCQLDTGLASWS*CLCRNR
Trigger: TCTATTCCTGCACAAACATCATGACCAAGAAGCAAG...GCCTGTGTCAAGTTGACACAAAACTAGCCAGTACAACAATAAACTTGAATAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
3UTR CAA 72 bp CACAGGCTGGAGTTATCTCAGAGAAAAGAGATTCAATaGGGGAAATGCCTCCATGAGATCCAGCTGCAATGC +
Preference number: 4 (lower is better)
Translates to: HRLELSQRKEIQ*GKCLHEIQLQC
Trigger: GCATTGCAGCTGGATCTCATGGAGGCATTTCCCCAATTGAATCTCTTTTCTCTGAGATAACTCCAGCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
CDS-3UTR CAA 90 bp AAGCCAGTAAAGAACATCACTCCATGGCCTTGCATCAGCTCCTGCTTCCTGACCCTAAAAGCTACTTGGTaGCTGTTATTATCCCACCAG +
Preference number: 5 (lower is better)
Translates to: KPVKNITPWPCISSCFLTLKATW*LLLSHQ
Trigger: CTGGTGGGATAATAACAGCAACCAAGTAGCTTTTAG...GGTCAGGAAGCAGGAGCTGATGCAAGGCCATGGAGTGATGTTCTTTACTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
CDS-3UTR CAA 90 bp GCTGATAGTCTTGGTTCTATAAGAGAACAGGCTGAGCAAGCCAGAGGAGACAAGGTTACTCCATTGTTATaGGGTGGTCCAATCCAGTCA +
Preference number: 5 (lower is better)
Translates to: ADSLGSIREQAEQARGDKVTPLL*GGPIQS
Trigger: TGACTGGATTGGACCACCCAATAACAATGGAGTAAC...CTTGTCTCCTCTGGCTTGCTCAGCCTGTTCTCTTATAGAACCAAGACTATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
CDS-3UTR CAA 90 bp GCTCTACCAGAGACAATGACTTATCCAGAATCCAAGGTTATGCCAGTTCCTAAACAGATCAATGACCTCTaGGAAAATGAAAGGTCTGCT +
Preference number: 5 (lower is better)
Translates to: ALPETMTYPESKVMPVPKQINDL*ENERSA
Trigger: AGCAGACCTTTCATTTTCCAAGAGGTCATTGATCTG...TTTAGGAACTGGCATAACCTTGGATTCTGGATAAGTCATTGTCTCTGGTAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
CDS-3UTR CAA 90 bp GCTCTACCAGAGACAATGACTTATCCAGAATCCAAGGTTATGCCAGTTCCTAAATCTGCTAAAAGCTACTaGGTTGCTGTTATTATCCCA +
Preference number: 5 (lower is better)
Translates to: ALPETMTYPESKVMPVPKSAKSY*VAVIIP
Trigger: TGGGATAATAACAGCAACCAAGTAGCTTTTAGCAGA...TTTAGGAACTGGCATAACCTTGGATTCTGGATAAGTCATTGTCTCTGGTAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5
CDS-3UTR CAA 90 bp GCCTATTCAAGTTTATTGTTGTACTGGCTAGTTTTGTGTCAACTTGACACAGGCTCTTTTGTTACTCCATaGTTATTGGGTGGTCCAATC +
Preference number: 5 (lower is better)
Translates to: AYSSLLLYWLVLCQLDTGSFVTP*LLGGPI
Trigger: GATTGGACCACCCAATAACAATGGAGTAACAAAAGA...GCCTGTGTCAAGTTGACACAAAACTAGCCAGTACAACAATAAACTTGAATAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000098667.5