Pregenerated sensors for AMY1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074264

Ensembl transcript IDs: ENSMUST00000067980.12, ENSMUST00000106540.8, ENSMUST00000142505.9, ENSMUST00000174147.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTTGAAGGGCTGTGGACTACGATGTTTTCATTGGGTGGAGAGACCTaGACACCTGCAAATCCATTAGGAGCTAAGTATCTCTCACATTCC	+
Preference number: 5 (lower is better) Translates to: LEGLWTTMFSLGGET*TPANPLGAKYLSHS Trigger: GGAATGTGAGAGATACTTAGCTCCTAATGGATTTGCAGGTGTGCAGGTCTCTCCACCCAATGAAAACATCGTAGTCCACAGCCCTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067980.12 ENSMUST00000106540.8 ENSMUST00000142505.9 ENSMUST00000174147.2
CDS CCA 90 bp	GCTGTCTGGGTTAATGCTCACTTCTTTGGTTTTTCCATTGTTATTTaGTGGTCCAACCCAGTCATTGACATCTTTTCCATTCTGGAAATT	+
Preference number: 5 (lower is better) Translates to: AVWVNAHFFGFSIVI*WSNPVIDIFSILEI Trigger: AATTTCCAGAATGGAAAAGATGTCAATGACTGGGTTGGACCACCAAATAACAATGGAAAAACCAAAGAAGTGAGCATTAACCCAGACAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067980.12 ENSMUST00000106540.8
CDS GCA 72 bp	CTGTGGACTACGATGTTTTCATTGGGTGGAGAGACCTaGACACCTGCAAATCCATTAGGAGCTAAGTATCTC	+
Preference number: 6 (lower is better) Translates to: LWTTMFSLGGET*TPANPLGAKYL Trigger: GAGATACTTAGCTCCTAATGGATTTGCAGGTGTGCAGGTCTCTCCACCCAATGAAAACATCGTAGTCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067980.12 ENSMUST00000106540.8 ENSMUST00000142505.9 ENSMUST00000174147.2
CDS TCA 72 bp	TGGTTGCTGTCATTATCCCACCAGTTTGCAAAAGGCTaGCCATTGACGACATTTCTGAAGGCAACCATGTTC	+
Preference number: 6 (lower is better) Translates to: WLLSLSHQFAKG*PLTTFLKATMF Trigger: GAACATGGTTGCCTTCAGAAATGTCGTCAATGGTCAGCCTTTTGCAAACTGGTGGGATAATGACAGCAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067980.12 ENSMUST00000106540.8
CDS GCA 72 bp	AAAAGCTACCTGGTTGCTGTCATTATCCCACCAGTTTaGAAAAGGCTGACCATTGACGACATTTCTGAAGGC	+
Preference number: 6 (lower is better) Translates to: KSYLVAVIIPPV*KRLTIDDISEG Trigger: GCCTTCAGAAATGTCGTCAATGGTCAGCCTTTTGCAAACTGGTGGGATAATGACAGCAACCAGGTAGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067980.12 ENSMUST00000106540.8
CDS CCA 72 bp	GTTAATGCTCACTTCTTTGGTTTTTCCATTGTTATTTaGTGGTCCAACCCAGTCATTGACATCTTTTCCATT	+
Preference number: 6 (lower is better) Translates to: VNAHFFGFSIVI*WSNPVIDIFSI Trigger: AATGGAAAAGATGTCAATGACTGGGTTGGACCACCAAATAACAATGGAAAAACCAAAGAAGTGAGCATTAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067980.12 ENSMUST00000106540.8

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