RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMPD2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027889

Ensembl transcript IDs: ENSMUST00000078912.7, ENSMUST00000102637.8, ENSMUST00000102638.8

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCCCAGCGCAGACCAGCTGGAACTTCAGAGGCTGAGCAGCCAGTaGCACAGCAGAGAGATAACGAGCCCCTCCTGTCCCACAGCCACA +
Preference number: 1 (lower is better)
Translates to: LPSADQLELQRLSSQ*HSREITSPSCPTAT
Trigger: TGTGGCTGTGGGACAGGAGGGGCTCGTTATCTCTCTGCTGTGGCACTGGCTGCTCAGCCTCTGAAGTTCCAGCTGGTCTGCGCTGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR GCA 90 bp AAGGTGCCACCTCCAGAGCTAGTAACAGTTCCAGCACCCTCCAACTaGAATAGCCTCCAACTGAGACAGGTCAGGGCAGCTGCCCCCTCC +
Preference number: 1 (lower is better)
Translates to: KVPPPELVTVPAPSN*NSLQLRQVRAAAPS
Trigger: GGAGGGGGCAGCTGCCCTGACCTGTCTCAGTTGGAGGCTATTGCAGTTGGAGGGTGCTGGAACTGTTACTAGCTCTGGAGGTGGCACCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR TCA 90 bp GCCCCTCCTGTCCCACAGCCACATAAACAAGAGGGAAACTCAACTTaGACTCTAACCAAAGCCTGGGTTCCCGGTGCTCAAGGGGCCAGC +
Preference number: 1 (lower is better)
Translates to: APPVPQPHKQEGNST*TLTKAWVPGAQGAS
Trigger: GCTGGCCCCTTGAGCACCGGGAACCCAGGCTTTGGTTAGAGTTCAAGTTGAGTTTCCCTCTTGTTTATGTGGCTGTGGGACAGGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR GCA 90 bp AGAGGGAAACTCAACTTGAACTCTAACCAAAGCCTGGGTTCCCGGTaGTCAAGGGGCCAGCCCTACACAACCATCCCAAGCCCCTGTGGA +
Preference number: 1 (lower is better)
Translates to: RGKLNLNSNQSLGSR*SRGQPYTTIPSPCG
Trigger: TCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGCCCCTTGAGCACCGGGAACCCAGGCTTTGGTTAGAGTTCAAGTTGAGTTTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR TCA 90 bp TCAAGGGGCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTaGGGATACCATAGGACAGCCAGACTTCTGACAATTCTGAGATGG +
Preference number: 1 (lower is better)
Translates to: SRGQPYTTIPSPCGH*GYHRTARLLTILRW
Trigger: CCATCTCAGAATTGTCAGAAGTCTGGCTGTCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGCCCCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR CCA 90 bp GTTCTTCATAGCAAAGGCCTCGGTCTAGAACATAACACAAGAGGCTaGCTGGGAACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGA +
Preference number: 1 (lower is better)
Translates to: VLHSKGLGLEHNTRG*LGTGSGQRPGNPQR
Trigger: TCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCCTTTGCTATGAAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR CCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAACTCAGCAGGGACAGTaGGCCAGCCCCTCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGTQQGQ*ASPSGQ
Trigger: CTGGCCTGAGGGGCTGGCCCACTGTCCCTGCTGAGT...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR TCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGGGGCTGATGGGCAGTaGCTCAGCAGGGACAGTGGG +
Preference number: 2 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNGADGQ*LSRDSG
Trigger: CCCACTGTCCCTGCTGAGTCACTGCCCATCAGCCCC...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACACTCAGCAGGGACAGTaGGCCAGCCCCTCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNTQQGQ*ASPSGQ
Trigger: CTGGCCTGAGGGGCTGGCCCACTGTCCCTGCTGAGT...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR TCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGAGGCCTCCAGGGCCGTaGGTGAGCCTAAGTCCTGCT +
Preference number: 2 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTRPPGP*VSLSPA
Trigger: AGCAGGACTTAGGCTCACTCACGGCCCTGGAGGCCT...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR TCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGGGGGCTGATGGGCAGTaGCTCAGCAGGGACAGTGGG +
Preference number: 2 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEGADGQ*LSRDSG
Trigger: CCCACTGTCCCTGCTGAGTCACTGCCCATCAGCCCC...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR CCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGACTGACAATTCTGAGATaGGTCACGAGCAGGGCCAAC +
Preference number: 2 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGLTILR*VTSRAN
Trigger: GTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAG...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR TCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGAGCCCCTGTGGACACTaGGGATACCATAGGACAGCC +
Preference number: 2 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPESPCGH*GYHRTA
Trigger: GGCTGTCCTATGGTATCCTCAGTGTCCACAGGGGCT...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR TCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAAGCCCCTGTGGACACTaGGGATACCATAGGACAGCC +
Preference number: 2 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQSPCGH*GYHRTA
Trigger: GGCTGTCCTATGGTATCCTCAGTGTCCACAGGGGCT...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR TCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTTGGAACTTCAGAGGCTaGGCAGCCAGTGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: GLVKDLETPKEGATSRASWNFRG*AASATA
Trigger: TGCTGTGGCACTGGCTGCTCAGCCTCTGAAGTTCCA...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR TCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGGCAATAGCCTCCAACTaGGACAGGTCAGGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEAIASN*DRSGQL
Trigger: CAGCTGCCCTGACCTGTCTCAGTTGGAGGCTATTGC...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR CCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGTTGCTTTCACTGAGGTaGCCCAGAGGCAAGACATGG +
Preference number: 2 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTLLSLR*PRGKTW
Trigger: CCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR TCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGAGGGAAACTCAACTTaGACTCTAACCAAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGEGNST*TLTKAW
Trigger: CCAGGCTTTGGTTAGAGTTCAAGTTGAGTTTCCCTC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR CCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGACTGACAATTCTGAGATaGGTCACGAGCAGGGCCAAC +
Preference number: 2 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGLTILR*VTSRAN
Trigger: GTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAG...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR CCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGACTCTAACCAAAGCCTaGGTTCCCGGTGCTCAAGGG +
Preference number: 2 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPETLTKA*VPGAQG
Trigger: CCCTTGAGCACCGGGAACCCAGGCTTTGGTTAGAGT...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR CCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAATTGCTTTCACTGAGGTaGCCCAGAGGCAAGACATGG +
Preference number: 2 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQLLSLR*PRGKTW
Trigger: CCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR CCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGTTGCTTTCACTGAGGTaGCCCAGAGGCAAGACATGG +
Preference number: 2 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPELLSLR*PRGKTW
Trigger: CCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR-3UTR TCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAGAGGGAAACTCAACTTaGACTCTAACCAAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQEGNST*TLTKAW
Trigger: CCAGGCTTTGGTTAGAGTTCAAGTTGAGTTTCCCTC...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR GCA 72 bp GGCCAGGCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTaGTCTGCCCAGCGCAGACCAGCTGGAACTTCAGAG +
Preference number: 3 (lower is better)
Translates to: GQASRAVSEPKS*SAQRRPAGTSE
Trigger: CTCTGAAGTTCCAGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGCCTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR TCA 72 bp CAGTTCCAGCACCCTCCAACTGCAATAGCCTCCAACTaGGACAGGTCAGGGCAGCTGCCCCCTCCCACAGGG +
Preference number: 3 (lower is better)
Translates to: QFQHPPTAIASN*DRSGQLPPPTG
Trigger: CCCTGTGGGAGGGGGCAGCTGCCCTGACCTGTCTCAGTTGGAGGCTATTGCAGTTGGAGGGTGCTGGAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR GCA 72 bp CTCAACTTGAACTCTAACCAAAGCCTGGGTTCCCGGTaGTCAAGGGGCCAGCCCTACACAACCATCCCAAGC +
Preference number: 3 (lower is better)
Translates to: LNLNSNQSLGSR*SRGQPYTTIPS
Trigger: GCTTGGGATGGTTGTGTAGGGCTGGCCCCTTGAGCACCGGGAACCCAGGCTTTGGTTAGAGTTCAAGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR CCA 72 bp AAGAGGCTGGCTGGGAACTGGGTCTGGTCAAAGACCTaGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTA +
Preference number: 3 (lower is better)
Translates to: KRLAGNWVWSKT*KPPKKVPPPEL
Trigger: TAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTTCCCAGCCAGCCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR TCA 72 bp CAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTaGGGATACCATAGGACAGCCAGACTTCTGACAATT +
Preference number: 3 (lower is better)
Translates to: QPYTTIPSPCGH*GYHRTARLLTI
Trigger: AATTGTCAGAAGTCTGGCTGTCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR GCA 72 bp CGAAGACATGCAGGACAGAAACATAGCACGGAGACATaGAGAGACCACATCAGGTGGGAGGGGTCTAATCAC +
Preference number: 3 (lower is better)
Translates to: RRHAGQKHSTET*RDHIRWEGSNH
Trigger: GTGATTAGACCCCTCCCACCTGATGTGGTCTCTGCATGTCTCCGTGCTATGTTTCTGTCCTGCATGTCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR CCA 72 bp AGCAAAGGCCTCGGTCTAGAACATAACACAAGAGGCTaGCTGGGAACTGGGTCTGGTCAAAGACCTGGAAAC +
Preference number: 3 (lower is better)
Translates to: SKGLGLEHNTRG*LGTGSGQRPGN
Trigger: GTTTCCAGGTCTTTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCCTTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR TCA 72 bp GTCCCACAGCCACATAAACAAGAGGGAAACTCAACTTaGACTCTAACCAAAGCCTGGGTTCCCGGTGCTCAA +
Preference number: 3 (lower is better)
Translates to: VPQPHKQEGNST*TLTKAWVPGAQ
Trigger: TTGAGCACCGGGAACCCAGGCTTTGGTTAGAGTTCAAGTTGAGTTTCCCTCTTGTTTATGTGGCTGTGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
3UTR TCA 72 bp GACAATAATGAAGCAGATTCCTGGACTTGCTTTCACTaGGGTGGCCCAGAGGCAAGACATGGTCGAAGACAT +
Preference number: 3 (lower is better)
Translates to: DNNEADSWTCFH*GGPEARHGRRH
Trigger: ATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCTTCATTATTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGCAGGACGGGGGCCTTaGGCAGGAGCAGCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGAGRGP*AGAARG
Trigger: CCCACGGGCTGCTCCTGCGCAAGGCCCCCGTCCTGC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTCAAGCGGGAAGTGCTTaGGGCAAGGGGCGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAQAGSA*GKGRCL
Trigger: CAGGCAACGCCCCTTGCCTCAAGCACTTCCCGCTTG...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTCCACACCACGCACCATaGGCAGACCCAAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAPHHAP*ADPSPG
Trigger: ACCTGGGCTTGGGTCTGCGCATGGTGCGTGGTGTGG...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTAAGGCTGATACCAGGTaGTGGATGGGCCCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAKADTR*WMGPAS
Trigger: GGAGGCCGGGCCCATCCACCACCTGGTATCAGCCTT...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTGGCCAGCATGAAGGCTaGTACCAGGTGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAGQHEG*YQVVDG
Trigger: CCCATCCACCACCTGGTATCAGCCTTCATGCTGGCC...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGACGGGTGCTGCTCCAGTaGAGGGGGATGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGRVLLQ*RGMHWG
Trigger: GCCCCAGTGCATCCCCCTGCACTGGAGCAGCACCCG...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTGGTTCCGGTGGTAGCTaGGGAACAGGCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAGSGGS*GTGCCC
Trigger: GCAACAACAGCCTGTTCCTCAGCTACCACCGGAACC...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTACATATCGCAGGAGCTaGGCTTCCACACCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPATYRRS*ASTPGW
Trigger: CCACCCAGGTGTGGAAGCTCAGCTCCTGCGATATGT...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTGCGGGGACATGGCGATaGCGATCTGAGCCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAAGTWR*RSEPGN
Trigger: ATTACCTGGCTCAGATCGGCATCGCCATGTCCCCGC...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTACACCTGGGTGGCGATaGTGTACTCCTCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPATPGWR*CTPPSG
Trigger: CCCTGATGGAGGAGTACAGCATCGCCACCCAGGTGT...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTCTCCACCCAAGCTTCTaGGAGGGGACTCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPALHPSF*EGTLQV
Trigger: AACCTGGAGAGTCCCCTCCCAGAAGCTTGGGTGGAG...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAGCAGGACGGGGGCCTTaGGCAGGAGCAGCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTAGRGP*AGAARG
Trigger: CCCACGGGCTGCTCCTGCGCAAGGCCCCCGTCCTGC...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGGCAAGGGGCGTTGCCTaGCAGGGATCGGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTARGVA*QGSGRL
Trigger: CAGTCTGCCCGATCCCTGCCAGGCAACGCCCCTTGC...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGCAAGGGGCGTTGCCTaGCAGGGATCGGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNARGVA*QGSGRL
Trigger: CAGTCTGCCCGATCCCTGCCAGGCAACGCCCCTTGC...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTGATGGGGCTTTCCTCTaGGAACTCATAAGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPADGAFL*ELIRGA
Trigger: AGCGCCCCTTATGAGTTCCCAGAGGAAAGCCCCATC...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACCGCAGGAGCAGCCCGTaGGAGATGTTCTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNRRSSP*EMFSAS
Trigger: GCTGGCCGAGAACATCTCCCACGGGCTGCTCCTGCG...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTTGTACTTCTCCCGGATaGAAAGTGCCCGAACCACAC +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPACTSPG*KVPEPH
Trigger: GTGTGGTTCGGGCACTTTTCATCCGGGAGAAGTACA...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTCCCTGTCCCTCTCCTTaGTCCTTGTACAGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAPCPSP*SLYSCK
Trigger: CTTACAGCTGTACAAGGAGCAAGGAGAGGGACAGGG...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTCGGGTGCTGCTCCAGTaGAGGGGGATGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASRVLLQ*RGMHWG
Trigger: GCCCCAGTGCATCCCCCTGCACTGGAGCAGCACCCG...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGATGCTCATACGGGTGCTaGTCCAGTGCAGGGGGATGC +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGCSYGC*SSAGGC
Trigger: GCATCCCCCTGCACTGGAGCAGCACCCGTATGAGCA...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGCCACACCACGCACCATaGGCAGACCCAAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTPHHAP*ADPSPG
Trigger: ACCTGGGCTTGGGTCTGCGCATGGTGCGTGGTGTGG...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTGGACAGCCGGAGCTCTaGATTCTGGTATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAGQPEL*ILVFAL
Trigger: GAGAGCAAATACCAGAATGCAGAGCTCCGGCTGTCC...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGAAGAGGCGGGGCACCTaGACCAGCCAGCGGACATTG +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTKRRGT*TSQRTL
Trigger: CAATGTCCGCTGGCTGGTGCAGGTGCCCCGCCTCTT...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGACCCAGGCATGGCGCTTaGCTCACAGTGCTCATACGG +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGPRHGA*LTVLIR
Trigger: CCGTATGAGCACTGTGAGCCAAGCGCCATGCCTGGG...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGAGGTGCAGCTCCGGGTaGCTGGCAGGGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTRCSSG*LAGCTV
Trigger: TACTGTGCACCCTGCCAGCCACCCGGAGCTGCACCT...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACATACCAGGTGGTGGATaGGCCCGGCCTCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNIPGGG*ARPPHS
Trigger: ACTGTGGGGAGGCCGGGCCCATCCACCACCTGGTAT...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGAAGGCTGATACCAGGTaGTGGATGGGCCCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTKADTR*WMGPAS
Trigger: GGAGGCCGGGCCCATCCACCACCTGGTATCAGCCTT...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGACGCAGGAGCAGCCCGTaGGAGATGTTCTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGRRSSP*EMFSAS
Trigger: GCTGGCCGAGAACATCTCCCACGGGCTGCTCCTGCG...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGACAAGCGGGAAGTGCTTaGGGCAAGGGGCGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGQAGSA*GKGRCL
Trigger: CAGGCAACGCCCCTTGCCTCAAGCACTTCCCGCTTG...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTGGGCCATCAGCACATTaGCGTCAGCTACAAATTCCT +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAGPSAH*RQLQIP
Trigger: AGGAATTTGTAGCTGACGTCAATGTGCTGATGGCCC...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTTGGCTTTTCACCTTGTaGGAGAAGCCACTCATGAGC +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAWLFTL*EKPLMS
Trigger: GCTCATGAGTGGCTTCTCTCACAAGGTGAAAAGCCA...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAAAGGCCCTGGGCTCATaGCAATGCCCACTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGKALGS*QCPLPL
Trigger: CAGAGGAAGTGGGCATTGTCATGAGCCCAGGGCCTT...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGCAGTGCTCATACGGGTaGTGCTCCAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTQCSYG*CSSAGG
Trigger: TCCCCCTGCACTGGAGCAGCACCCGTATGAGCACTG...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGCTCATCAGGGTCCCTaGGGGTGTAGACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNAHQGP*GCRRAP
Trigger: TGGTGCACGTCTACACCCGCAGGGACCCTGATGAGC...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGAAAGAGGCGGGGCACCTaGACCAGCCAGCGGACATTG +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGKRRGT*TSQRTL
Trigger: CAATGTCCGCTGGCTGGTGCAGGTGCCCCGCCTCTT...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGATACGGCGGATATCATTaGCCTCAGGGCCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGYGGYH*PQGPPW
Trigger: CCAAGGAGGGCCCTGAGGGCAATGATATCCGCCGTA...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGCCTTGGACTTGCCTaGGCCAGGATAGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGGLGLA*ARIGCH
Trigger: ATGGCATCCTATCCTGGCCCAGGCAAGTCCAAGGCC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078912.7
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGGTAACGGCGGGTGGTaGGACAGAAGCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNGNGGW*DRSSAV
Trigger: CACTGCAGAGCTTCTGTCCCACCACCCGCCGTTACC...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGGCAGGTAACGGCGGGTaGTGGGACAGAAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTAGNGG*WDRSSA
Trigger: TGCAGAGCTTCTGTCCCACCACCCGCCGTTACCTGC...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGCATCTCTTGGAAGTTaGCCAGCTGGCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGASLGS*PAGPWC
Trigger: GCACCAAGGGCCAGCTGGCCAACTTCCAAGAGATGC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGAAGGTGCAGCTCCGGGTaGCTGGCAGGGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGRCSSG*LAGCTV
Trigger: TACTGTGCACCCTGCCAGCCACCCGGAGCTGCACCT...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGAATACCAGGTGGTGGATaGGCCCGGCCTCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGIPGGG*ARPPHS
Trigger: ACTGTGGGGAGGCCGGGCCCATCCACCACCTGGTAT...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAACGCAGGAGCAGCCCGTaGGAGATGTTCTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQRRSSP*EMFSAS
Trigger: GCTGGCCGAGAACATCTCCCACGGGCTGCTCCTGCG...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGCTTCCACACCTGGGTaGCGATGCTGTACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGASTPG*RCCTPP
Trigger: TGGAGGAGTACAGCATCGCCACCCAGGTGTGGAAGC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGCCTCAGGGCCCTCCTTaGTATAGTTGGGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTPQGPP*YSWVPA
Trigger: GGCTGGGACCCAACTATACCAAGGAGGGCCCTGAGG...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTCCACTTCCTCTGGGATaGTCTCCAGCATCTCACTTT +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAPLPLG*SPASHF
Trigger: AAAGTGAGATGCTGGAGACCATCCCAGAGGAAGTGG...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTCAAGCGGGAAGTGCTTaGGGCAAGGGGCGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASQAGSA*GKGRCL
Trigger: CAGGCAACGCCCCTTGCCTCAAGCACTTCCCGCTTG...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGGGGGACTCTCCAGGTTaGAGACGTGGTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTGDSPG*RRGSLA
Trigger: AGCCAGAGAACCACGTCTTCAACCTGGAGAGTCCCC...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGATCAGGGGCTCCTTGGTaGAGTGGAACTGCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGSGAPW*SGTARD
Trigger: ATCCCTTGCAGTTCCACTTCACCAAGGAGCCCCTGA...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGATGCTCATACGGGTGCTaGTCCAGTGCAGGGGGATGC +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGCSYGC*SSAGGC
Trigger: GCATCCCCCTGCACTGGAGCAGCACCCGTATGAGCA...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGAGCGCTTGGCTCACAGTaGTCATACGGGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGALGSQ*SYGCCS
Trigger: GGAGCAGCACCCGTATGAGCACTGTGAGCCAAGCGC...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGAGCTCATCAGGGTCCCTaGGGGTGTAGACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGAHQGP*GCRRAP
Trigger: TGGTGCACGTCTACACCCGCAGGGACCCTGATGAGC...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGCGGCCCTGTTCCACATaGACAATCTCCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTRPCST*TISSRC
Trigger: GCACCTGGAGGAGATTGTGCATGTGGAACAGGGCCG...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACCGGCCCTGTTCCACATaGACAATCTCCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNRPCST*TISSRC
Trigger: GCACCTGGAGGAGATTGTGCATGTGGAACAGGGCCG...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACACACCTGGGTGGCGATaGTGTACTCCTCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNTPGWR*CTPPSG
Trigger: CCCTGATGGAGGAGTACAGCATCGCCACCCAGGTGT...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGAGGTAACGGCGGGTGGTaGGACAGAAGCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGGNGGW*DRSSAV
Trigger: CACTGCAGAGCTTCTGTCCCACCACCCGCCGTTACC...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACTGGAAGTTGGCCAGCTaGCCCTTGGTGCGGTACACA +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNWKLAS*PLVRYT
Trigger: TGTGTACCGCACCAAGGGCCAGCTGGCCAACTTCCA...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGCATCTCTTGGAAGTTaGCCAGCTGGCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNASLGS*PAGPWC
Trigger: GCACCAAGGGCCAGCTGGCCAACTTCCAAGAGATGC...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGATTCTCCAGCATCTCTTaGAAGTTGGCCAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGFSSIS*KLASWP
Trigger: GGGCCAGCTGGCCAACTTCCAAGAGATGCTGGAGAA...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAGGTGCAGCTCCGGGTaGCTGGCAGGGTGCACAGTA +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSRCSSG*LAGCTV
Trigger: TACTGTGCACCCTGCCAGCCACCCGGAGCTGCACCT...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACCTCCACCCAAGCTTCTaGGAGGGGACTCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNLHPSF*EGTLQV
Trigger: AACCTGGAGAGTCCCCTCCCAGAAGCTTGGGTGGAG...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAGGCCAGCATGAAGGCTaGTACCAGGTGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQGQHEG*YQVVDG
Trigger: CCCATCCACCACCTGGTATCAGCCTTCATGCTGGCC...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGGGCCAGCATGAAGGCTaGTACCAGGTGGTGGATGGG +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEGQHEG*YQVVDG
Trigger: CCCATCCACCACCTGGTATCAGCCTTCATGCTGGCC...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGACCCTGTCCCTCTCCTTaGTCCTTGTACAGCTGTAAG +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGPCPSP*SLYSCK
Trigger: CTTACAGCTGTACAAGGAGCAAGGAGAGGGACAGGG...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGATCCAGTGCAGGGGGATaGACTGGGGCATCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGSSAGG*TGASAD
Trigger: ATCTGCTGATGCCCCAGTGCATCCCCCTGCACTGGA...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTCAGTGCTCATACGGGTaGTGCTCCAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASQCSYG*CSSAGG
Trigger: TCCCCCTGCACTGGAGCAGCACCCGTATGAGCACTG...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTGCGCTTGGCTCACAGTaGTCATACGGGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASALGSQ*SYGCCS
Trigger: GGAGCAGCACCCGTATGAGCACTGTGAGCCAAGCGC...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACACCACACCACGCACCATaGGCAGACCCAAGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTPHHAP*ADPSPG
Trigger: ACCTGGGCTTGGGTCTGCGCATGGTGCGTGGTGTGG...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGACAGCCGGAGCTCTaGATTCTGGTATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGGQPEL*ILVFAL
Trigger: GAGAGCAAATACCAGAATGCAGAGCTCCGGCTGTCC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCCAGCTGGCCCTTGGTaGGGTACACATCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEPAGPW*GTHRRG
Trigger: GCCTCTTCGATGTGTACCGCACCAAGGGCCAGCTGG...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGGCAGGTAACGGCGGGTaGTGGGACAGAAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSAGNGG*WDRSSA
Trigger: TGCAGAGCTTCTGTCCCACCACCCGCCGTTACCTGC...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGTAGAAGTCCCGGTGTaGCACTTTCTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGVEVPV*HFLLSS
Trigger: GCTGCTCAGAAGAAAGTGCCACACCGGGACTTCTAC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGATGGCCAGCTGGCCCTTaGTGCGGTACACATCGAAGA +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGWPAGP*CGTHRR
Trigger: TCTTCGATGTGTACCGCACCAAGGGCCAGCTGGCCA...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGAGCATCTCTTGGAAGTTaGCCAGCTGGCCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGASLGS*PAGPWC
Trigger: GCACCAAGGGCCAGCTGGCCAACTTCCAAGAGATGC...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAATACCAGGTGGTGGATaGGCCCGGCCTCCCCACAGT +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTIPGGG*ARPPHS
Trigger: ACTGTGGGGAGGCCGGGCCCATCCACCACCTGGTAT...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGACTGAGCTTCCACACCTaGGTGGCGATGCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGLSFHT*VAMLYS
Trigger: GGAGTACAGCATCGCCACCCAGGTGTGGAAGCTCAG...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCCTCAGGGCCCTCCTTaGTATAGTTGGGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEPQGPP*YSWVPA
Trigger: GGCTGGGACCCAACTATACCAAGGAGGGCCCTGAGG...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGCCTCAGGGCCCTCCTTaGTATAGTTGGGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSPQGPP*YSWVPA
Trigger: GGCTGGGACCCAACTATACCAAGGAGGGCCCTGAGG...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAAATGCCCACTTCCTCTaGGATGGTCTCCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGNAHFL*DGLQHL
Trigger: GAGATGCTGGAGACCATCCCAGAGGAAGTGGGCATT...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGACCGGCGGTAGCAGAATaGCTTTATGGGACCATTGAT +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGPAVAE*LYGTID
Trigger: ATCAATGGTCCCATAAAGTCATTCTGCTACCGCCGG...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGTGTGGCACTTTCTTCTaGGCAGCGAGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTCGTFF*AASSFI
Trigger: GATGAAGGAGCTCGCTGCTCAGAAGAAAGTGCCACA...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGGGGGACTCTCCAGGTTaGAGACGTGGTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEGDSPG*RRGSLA
Trigger: AGCCAGAGAACCACGTCTTCAACCTGGAGAGTCCCC...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAGGTTCCGGTGGTAGCTaGGGAACAGGCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQGSGGS*GTGCCC
Trigger: GCAACAACAGCCTGTTCCTCAGCTACCACCGGAACC...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAAAGGCCCTGGGCTCATaGCAATGCCCACTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQKALGS*QCPLPL
Trigger: CAGAGGAAGTGGGCATTGTCATGAGCCCAGGGCCTT...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGTCCAGTGCAGGGGGATaGACTGGGGCATCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPESSAGG*TGASAD
Trigger: ATCTGCTGATGCCCCAGTGCATCCCCCTGCACTGGA...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTTCCAGTGCAGGGGGATaGACTGGGGCATCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASSSAGG*TGASAD
Trigger: ATCTGCTGATGCCCCAGTGCATCCCCCTGCACTGGA...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCGGGTGCTGCTCCAGTaGAGGGGGATGCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNRVLLQ*RGMHWG
Trigger: GCCCCAGTGCATCCCCCTGCACTGGAGCAGCACCCG...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTTCATTGAGCAAAACGTaGATCTGGAATTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPASLSKT*IWNLEL
Trigger: GAGCTCCAAATTCCAGATGCACGTTTTGCTCAATGA...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTACAATCTCCTCCAGGTaGCGCTTCATGGCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASTISSR*RFMARL
Trigger: CAAGCGGGCCATGAAGCGGCACCTGGAGGAGATTGT...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGACAATCTCCTCCAGGTaGCGCTTCATGGCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPETISSR*RFMARL
Trigger: CAAGCGGGCCATGAAGCGGCACCTGGAGGAGATTGT...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGCGGCCCTGTTCCACATaGACAATCTCCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSRPCST*TISSRC
Trigger: GCACCTGGAGGAGATTGTGCATGTGGAACAGGGCCG...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGGTATTCCTGTCCGCATaGACATCCAGCGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTVFLSA*TSSVST
Trigger: TGTGGACACGCTGGATGTGCATGCGGACAGGAATAC...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGCTCTCCTCCAAGTCTaGCATCACCTCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGALLQV*HHLLDD
Trigger: ATCATCAAGGAGGTGATGGCAGACTTGGAGGAGAGC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGGTTCACTGCCCAGCGTaGCAGCTTGTCCCACTCATC +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEVHCPA*QLVPLI
Trigger: GATGAGTGGGACAAGCTGGCACGCTGGGCAGTGAAC...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGCGGACATTGGGAGAGTaGACTTTGTGGTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTRTLGE*TLWFTA
Trigger: GGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCG...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACATGCTCCAGAAAGAGGTaGAGCTCCGGGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTCSRKR*SSGWLA
Trigger: TGCCAGCCACCCGGAGCTGCACCTCTTTCTGGAGCA...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACAGGGATATTTGGCCTTaGACTTGCCTGGGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNRDIWP*TCLGQD
Trigger: ATCCTGGCCCAGGCAAGTCCAAGGCCAAATATCCCT...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078912.7
CDS-3UTR CCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACGCAAGGGGCGTTGCCTaGCAGGGATCGGGCAGACTG +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHARGVA*QGSGRL
Trigger: CAGTCTGCCCGATCCCTGCCAGGCAACGCCCCTTGC...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTTCCAGCTTGACATCCTaGCTGATCTGGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASSSLTS*LIWRSS
Trigger: GCTGGAGCGCCAGATCAGCCAGGATGTCAAGCTGGA...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAATCCAGCTTGACATCCTaGCTGATCTGGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQSSLTS*LIWRSS
Trigger: GCTGGAGCGCCAGATCAGCCAGGATGTCAAGCTGGA...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACCGTGCATCTGGAATTTaGAGCTCAGGTACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNRASGI*SSGTAA
Trigger: GGCTGCAGTACCTGAGCTCCAAATTCCAGATGCACG...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGGTAGAAGTCCCGGTGTaGCACTTTCTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTVEVPV*HFLLSS
Trigger: GCTGCTCAGAAGAAAGTGCCACACCGGGACTTCTAC...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACCGCAGTAGATGTTTCTaGTTCATGCAGGACGAGGCG +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNRSRCF*FMQDEA
Trigger: CGCCTCGTCCTGCATGAACCAGAAACATCTACTGCG...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTTGGCCAGCTGGCCCTTaGTGCGGTACACATCGAAGA +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASWPAGP*CGTHRR
Trigger: TCTTCGATGTGTACCGCACCAAGGGCCAGCTGGCCA...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGTGGCCAGCTGGCCCTTaGTGCGGTACACATCGAAGA +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSWPAGP*CGTHRR
Trigger: TCTTCGATGTGTACCGCACCAAGGGCCAGCTGGCCA...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGAAGACGTGGTTCTCTaGCTTGGACTCATCATCCAC +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGEDVVL*LGLIIH
Trigger: GTGGATGATGAGTCCAAGCCAGAGAACCACGTCTTC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGCTCCTTGGTGAAGTaGAACTGCAAGGGATCATCT +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGGSLVK*NCKGSS
Trigger: AGATGATCCCTTGCAGTTCCACTTCACCAAGGAGCC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTGCTTCCACACCTGGGTaGCGATGCTGTACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASASTPG*RCCTPP
Trigger: TGGAGGAGTACAGCATCGCCACCCAGGTGTGGAAGC...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACCCTCCTTGGTATAGTTaGGTCCCAGCCAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNPPWYS*VPASGF
Trigger: AAAGCCACTGGCTGGGACCCAACTATACCAAGGAGG...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGACGTCTAAGAGGTCTGTaGATGGCACCCCACACTTCT +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGRLRGL*MAPHTS
Trigger: AGAAGTGTGGGGTGCCATTCACAGACCTCTTAGACG...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGATTAAGTCGTAGGCAGTaGGGTTCATGCTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGLSRRQ*GSCSRR
Trigger: TCTTCGAGAGCATGAACCTCACTGCCTACGACTTAA...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAGGGGACTCTCCAGGTTaGAGACGTGGTTCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTGDSPG*RRGSLA
Trigger: AGCCAGAGAACCACGTCTTCAACCTGGAGAGTCCCC...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAACATATCGCAGGAGCTaGGCTTCCACACCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTTYRRS*ASTPGW
Trigger: CCACCCAGGTGTGGAAGCTCAGCTCCTGCGATATGT...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGAGTGGGACAGAAGCTCTaGAGTGATAGGGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGVGQKL*SDRAMY
Trigger: GTACATGGCCCTATCACTGCAGAGCTTCTGTCCCAC...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGGATGTTTCTGGTTCATaGAGGACGAGGCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTDVSGS*RTRRGC
Trigger: ACATCCACGCCTCGTCCTGCATGAACCAGAAACATC...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAACACCTGGGTGGCGATaGTGTACTCCTCCATCAGGG +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTTPGWR*CTPPSG
Trigger: CCCTGATGGAGGAGTACAGCATCGCCACCCAGGTGT...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAGATGGGGCTTTCCTCTaGGAACTCATAAGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQDGAFL*ELIRGA
Trigger: AGCGCCCCTTATGAGTTCCCAGAGGAAAGCCCCATC...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACATCCAGCTTGACATCCTaGCTGATCTGGCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTSSLTS*LIWRSS
Trigger: GCTGGAGCGCCAGATCAGCCAGGATGTCAAGCTGGA...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTTCAGGAAATCTTGCTTaGCTCGAAGAAGAATATCTG +
Preference number: 4 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPASGNLA*LEEEYL
Trigger: CAGATATTCTTCTTCGAGCCAAGCAAGATTTCCTGA...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAATTCTCCAGCATCTCTTaGAAGTTGGCCAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQFSSIS*KLASWP
Trigger: GGGCCAGCTGGCCAACTTCCAAGAGATGCTGGAGAA...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTTTCTCCAGCATCTCTTaGAAGTTGGCCAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASFSSIS*KLASWP
Trigger: GGGCCAGCTGGCCAACTTCCAAGAGATGCTGGAGAA...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGTCCAGGTTGAAGACGTaGTTCTCTGGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTSRLKT*FSGLDS
Trigger: TGAGTCCAAGCCAGAGAACCACGTCTTCAACCTGGA...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACAAGGCTGATACCAGGTaGTGGATGGGCCCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHKADTR*WMGPAS
Trigger: GGAGGCCGGGCCCATCCACCACCTGGTATCAGCCTT...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGGCTCCTTGGTGAAGTaGAACTGCAAGGGATCATCT +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNGSLVK*NCKGSS
Trigger: AGATGATCCCTTGCAGTTCCACTTCACCAAGGAGCC...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCGTCTAAGAGGTCTGTaGATGGCACCCCACACTTCT +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPERLRGL*MAPHTS
Trigger: AGAAGTGTGGGGTGCCATTCACAGACCTCTTAGACG...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAATGTACTTCTCCCGGATaGAAAGTGCCCGAACCACAC +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQCTSPG*KVPEPH
Trigger: GTGTGGTTCGGGCACTTTTCATCCGGGAGAAGTACA...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGACCGGCGGTAGCAGAATaGCTTTATGGGACCATTGAT +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGPAVAE*LYGTID
Trigger: ATCAATGGTCCCATAAAGTCATTCTGCTACCGCCGG...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGTGTGGCACTTTCTTCTaGGCAGCGAGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSCGTFF*AASSFI
Trigger: GATGAAGGAGCTCGCTGCTCAGAAGAAAGTGCCACA...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGTTAAGTCGTAGGCAGTaGGGTTCATGCTCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTLSRRQ*GSCSRR
Trigger: TCTTCGAGAGCATGAACCTCACTGCCTACGACTTAA...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAACCTCCTTGATGATGTaGGCAAAGTACTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGTSLMM*AKYFPE
Trigger: TTCTGGGAAGTACTTTGCTCACATCATCAAGGAGGT...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACATCAGGGGCTCCTTGGTaGAGTGGAACTGCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTSGAPW*SGTARD
Trigger: ATCCCTTGCAGTTCCACTTCACCAAGGAGCCCCTGA...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAACTCCCGGATGAAAAGTaGCCGAACCACACTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQLPDEK*PNHTFG
Trigger: GCCAAAAGTGTGGTTCGGGCACTTTTCATCCGGGAG...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTCCCGGATGAAAAGTaGCCGAACCACACTTTTGGC +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPELPDEK*PNHTFG
Trigger: GCCAAAAGTGTGGTTCGGGCACTTTTCATCCGGGAG...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGGTGGGACAGAAGCTCTaGAGTGATAGGGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEVGQKL*SDRAMY
Trigger: GTACATGGCCCTATCACTGCAGAGCTTCTGTCCCAC...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAGTGGGACAGAAGCTCTaGAGTGATAGGGCCATGTAC +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQVGQKL*SDRAMY
Trigger: GTACATGGCCCTATCACTGCAGAGCTTCTGTCCCAC...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGAGATGTTTCTGGTTCATaGAGGACGAGGCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGDVSGS*RTRRGC
Trigger: ACATCCACGCCTCGTCCTGCATGAACCAGAAACATC...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAACGGACATTGGGAGAGTaGACTTTGTGGTTCACTGCC +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQRTLGE*TLWFTA
Trigger: GGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCG...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATAAGAGGCGGGGCACCTaGACCAGCCAGCGGACATTG +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNKRRGT*TSQRTL
Trigger: CAATGTCCGCTGGCTGGTGCAGGTGCCCCGCCTCTT...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACCCAGCTGGCCCTTGGTaGGGTACACATCGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHPAGPW*GTHRRG
Trigger: GCCTCTTCGATGTGTACCGCACCAAGGGCCAGCTGG...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACTGCTCCAGAAAGAGGTaGAGCTCCGGGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHCSRKR*SSGWLA
Trigger: TGCCAGCCACCCGGAGCTGCACCTCTTTCTGGAGCA...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGTTGGTGAAGTGGAACTaGAAGGGATCATCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTLVKWN*KGSSVD
Trigger: GTCCACAGATGATCCCTTGCAGTTCCACTTCACCAA...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACCCCAGGCATGGCGCTTaGCTCACAGTGCTCATACGG +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHPRHGA*LTVLIR
Trigger: CCGTATGAGCACTGTGAGCCAAGCGCCATGCCTGGG...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGCGTGCATCTGGAATTTaGAGCTCAGGTACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSRASGI*SSGTAA
Trigger: GGCTGCAGTACCTGAGCTCCAAATTCCAGATGCACG...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAGTAGAAGTCCCGGTGTaGCACTTTCTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQVEVPV*HFLLSS
Trigger: GCTGCTCAGAAGAAAGTGCCACACCGGGACTTCTAC...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGCGCAGTAGATGTTTCTaGTTCATGCAGGACGAGGCG +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSRSRCF*FMQDEA
Trigger: CGCCTCGTCCTGCATGAACCAGAAACATCTACTGCG...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGACGGAGCTCTGCATTCTaGTATTTGCTCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGRSSAF*YLLSSK
Trigger: CTTGGAGGAGAGCAAATACCAGAATGCAGAGCTCCG...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTCCTCCTTGGTATAGTTaGGTCCCAGCCAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASPPWYS*VPASGF
Trigger: AAAGCCACTGGCTGGGACCCAACTATACCAAGGAGG...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAACCTCCTTGGTATAGTTaGGTCCCAGCCAGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQPPWYS*VPASGF
Trigger: AAAGCCACTGGCTGGGACCCAACTATACCAAGGAGG...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGGGATGTCTGGCACGTTaGTACGGCGGATATCATTGC +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSGCLAR*YGGYHC
Trigger: GCAATGATATCCGCCGTACCAACGTGCCAGACATCC...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAAATGCCCACTTCCTCTaGGATGGTCTCCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQNAHFL*DGLQHL
Trigger: GAGATGCTGGAGACCATCCCAGAGGAAGTGGGCATT...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGAATGCCCACTTCCTCTaGGATGGTCTCCAGCATCTC +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPENAHFL*DGLQHL
Trigger: GAGATGCTGGAGACCATCCCAGAGGAAGTGGGCATT...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTGGGCCATCAGCACATTaGCGTCAGCTACAAATTCCT +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASGPSAH*RQLQIP
Trigger: AGGAATTTGTAGCTGACGTCAATGTGCTGATGGCCC...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGGGGCCATCAGCACATTaGCGTCAGCTACAAATTCCT +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSGPSAH*RQLQIP
Trigger: AGGAATTTGTAGCTGACGTCAATGTGCTGATGGCCC...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTCCGGCGGTAGCAGAATaGCTTTATGGGACCATTGAT +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASPAVAE*LYGTID
Trigger: ATCAATGGTCCCATAAAGTCATTCTGCTACCGCCGG...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGACCTCCTTGATGATGTaGGCAAAGTACTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTTSLMM*AKYFPE
Trigger: TTCTGGGAAGTACTTTGCTCACATCATCAAGGAGGT...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACGGTTCCGGTGGTAGCTaGGGAACAGGCTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHGSGGS*GTGCCC
Trigger: GCAACAACAGCCTGTTCCTCAGCTACCACCGGAACC...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGTGGCTTTTCACCTTGTaGGAGAAGCCACTCATGAGC +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEWLFTL*EKPLMS
Trigger: GCTCATGAGTGGCTTCTCTCACAAGGTGAAAAGCCA...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAATTTGGCCTTGGACTTaGCTGGGCCAGGATAGGATG +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTIWPWT*LGQDRM
Trigger: CATCCTATCCTGGCCCAGGCAAGTCCAAGGCCAAAT...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078912.7
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCAGTGCTCATACGGGTaGTGCTCCAGTGCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNQCSYG*CSSAGG
Trigger: TCCCCCTGCACTGGAGCAGCACCCGTATGAGCACTG...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATGCGCTTGGCTCACAGTaGTCATACGGGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNALGSQ*SYGCCS
Trigger: GGAGCAGCACCCGTATGAGCACTGTGAGCCAAGCGC...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATGCTCATCAGGGTCCCTaGGGGTGTAGACGTGCACCA +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNAHQGP*GCRRAP
Trigger: TGGTGCACGTCTACACCCGCAGGGACCCTGATGAGC...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTGATGTTTCTGGTTCATaGAGGACGAGGCGTGGATGT +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASDVSGS*RTRRGC
Trigger: ACATCCACGCCTCGTCCTGCATGAACCAGAAACATC...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATTGCTCCAGAAAGAGGTaGAGCTCCGGGTGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNCSRKR*SSGWLA
Trigger: TGCCAGCCACCCGGAGCTGCACCTCTTTCTGGAGCA...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACTACGGCGGATATCATTaGCCTCAGGGCCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHYGGYH*PQGPPW
Trigger: CCAAGGAGGGCCCTGAGGGCAATGATATCCGCCGTA...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGAGCAAAACGTGCATCTaGAATTTGGAGCTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTSKTCI*NLELRY
Trigger: GTACCTGAGCTCCAAATTCCAGATGCACGTTTTGCT...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCGGAGCTCTGCATTCTaGTATTTGCTCTCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPERSSAF*YLLSSK
Trigger: CTTGGAGGAGAGCAAATACCAGAATGCAGAGCTCCG...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACTGGAAGTTGGCCAGCTaGCCCTTGGTGCGGTACACA +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHWKLAS*PLVRYT
Trigger: TGTGTACCGCACCAAGGGCCAGCTGGCCAACTTCCA...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTGAAGACGTGGTTCTCTaGCTTGGACTCATCATCCAC +
Preference number: 4 (lower is better)
Translates to: GLVKDLETPKEGATSRASEDVVL*LGLIIH
Trigger: GTGGATGATGAGTCCAAGCCAGAGAACCACGTCTTC...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAGAAGACGTGGTTCTCTaGCTTGGACTCATCATCCAC +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQEDVVL*LGLIIH
Trigger: GTGGATGATGAGTCCAAGCCAGAGAACCACGTCTTC...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGTCCAGGTTGAAGACGTaGTTCTCTGGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSSRLKT*FSGLDS
Trigger: TGAGTCCAAGCCAGAGAACCACGTCTTCAACCTGGA...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACCTCCACCCAAGCTTCTaGGAGGGGACTCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHLHPSF*EGTLQV
Trigger: AACCTGGAGAGTCCCCTCCCAGAAGCTTGGGTGGAG...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAGGCTCCTTGGTGAAGTaGAACTGCAAGGGATCATCT +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQGSLVK*NCKGSS
Trigger: AGATGATCCCTTGCAGTTCCACTTCACCAAGGAGCC...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACGCTTCCACACCTGGGTaGCGATGCTGTACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHASTPG*RCCTPP
Trigger: TGGAGGAGTACAGCATCGCCACCCAGGTGTGGAAGC...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACCTGAGCTTCCACACCTaGGTGGCGATGCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHLSFHT*VAMLYS
Trigger: GGAGTACAGCATCGCCACCCAGGTGTGGAAGCTCAG...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAGGATGTCTGGCACGTTaGTACGGCGGATATCATTGC +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTGCLAR*YGGYHC
Trigger: GCAATGATATCCGCCGTACCAACGTGCCAGACATCC...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGCCACTTCCTCTGGGATaGTCTCCAGCATCTCACTTT +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSPLPLG*SPASHF
Trigger: AAAGTGAGATGCTGGAGACCATCCCAGAGGAAGTGG...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAGCTCCTTCATCTCATTaGGCAAAACGTGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQAPSSH*AKRASG
Trigger: TCCAGATGCACGTTTTGCTCAATGAGATGAAGGAGC...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGGCTCCTTCATCTCATTaGGCAAAACGTGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEAPSSH*AKRASG
Trigger: TCCAGATGCACGTTTTGCTCAATGAGATGAAGGAGC...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGGCTCCTTCATCTCATTaGGCAAAACGTGCATCTGGA +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSAPSSH*AKRASG
Trigger: TCCAGATGCACGTTTTGCTCAATGAGATGAAGGAGC...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATACATATCGCAGGAGCTaGGCTTCCACACCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNTYRRS*ASTPGW
Trigger: CCACCCAGGTGTGGAAGCTCAGCTCCTGCGATATGT...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACATGGCTTTTCACCTTGTaGGAGAAGCCACTCATGAGC +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTWLFTL*EKPLMS
Trigger: GCTCATGAGTGGCTTCTCTCACAAGGTGAAAAGCCA...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATACAATCTCCTCCAGGTaGCGCTTCATGGCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNTISSR*RFMARL
Trigger: CAAGCGGGCCATGAAGCGGCACCTGGAGGAGATTGT...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAGCTCTCCTCCAAGTCTaGCATCACCTCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTALLQV*HHLLDD
Trigger: ATCATCAAGGAGGTGATGGCAGACTTGGAGGAGAGC...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATGTTCACTGCCCAGCGTaGCAGCTTGTCCCACTCATC +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNVHCPA*QLVPLI
Trigger: GATGAGTGGGACAAGCTGGCACGCTGGGCAGTGAAC...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATGCGGGGACATGGCGATaGCGATCTGAGCCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNAGTWR*RSEPGN
Trigger: ATTACCTGGCTCAGATCGGCATCGCCATGTCCCCGC...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACATCCAGGTTGAAGACGTaGTTCTCTGGCTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTSRLKT*FSGLDS
Trigger: TGAGTCCAAGCCAGAGAACCACGTCTTCAACCTGGA...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTGAGCTTCCACACCTaGGTGGCGATGCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNLSFHT*VAMLYS
Trigger: GGAGTACAGCATCGCCACCCAGGTGTGGAAGCTCAG...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGTCCAGCATCTCACTTTaGACGGCCTGTGTGATAAGT +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPESSISL*TACVIS
Trigger: ACTTATCACACAGGCCGTCCAAAGTGAGATGCTGGA...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACACCACTTCCTCTGGGATaGTCTCCAGCATCTCACTTT +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTPLPLG*SPASHF
Trigger: AAAGTGAGATGCTGGAGACCATCCCAGAGGAAGTGG...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACTGTGGCACTTTCTTCTaGGCAGCGAGCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHCGTFF*AASSFI
Trigger: GATGAAGGAGCTCGCTGCTCAGAAGAAAGTGCCACA...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGAATTTGTCAAATCGATaGAAGGTATTCCTGTCCGCA +
Preference number: 4 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTNLSNR*KVFLSA
Trigger: TGCGGACAGGAATACCTTTCATCGATTTGACAAATT...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAACCTCCTTGATGATGTaGGCAAAGTACTTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQTSLMM*AKYFPE
Trigger: TTCTGGGAAGTACTTTGCTCACATCATCAAGGAGGT...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGATCATTGAGCAAAACGTaGATCTGGAATTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGSLSKT*IWNLEL
Trigger: GAGCTCCAAATTCCAGATGCACGTTTTGCTCAATGA...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACGTATTCCTGTCCGCATaGACATCCAGCGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHVFLSA*TSSVST
Trigger: TGTGGACACGCTGGATGTGCATGCGGACAGGAATAC...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATGATGGGGCTTTCCTCTaGGAACTCATAAGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNDGAFL*ELIRGA
Trigger: AGCGCCCCTTATGAGTTCCCAGAGGAAAGCCCCATC...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACTCAGGAAATCTTGCTTaGCTCGAAGAAGAATATCTG +
Preference number: 4 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNSGNLA*LEEEYL
Trigger: CAGATATTCTTCTTCGAGCCAAGCAAGATTTCCTGA...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAGCAAAACGTGCATCTaGAATTTGGAGCTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSSKTCI*NLELRY
Trigger: GTACCTGAGCTCCAAATTCCAGATGCACGTTTTGCT...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACATCCAGCATCTCACTTTaGACGGCCTGTGTGATAAGT +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTSSISL*TACVIS
Trigger: ACTTATCACACAGGCCGTCCAAAGTGAGATGCTGGA...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCCCGGATGAAAAGTaGCCGAACCACACTTTTGGC +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNLPDEK*PNHTFG
Trigger: GCCAAAAGTGTGGTTCGGGCACTTTTCATCCGGGAG...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGTCATTGAGCAAAACGTaGATCTGGAATTTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPESLSKT*IWNLEL
Trigger: GAGCTCCAAATTCCAGATGCACGTTTTGCTCAATGA...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATGTATTCCTGTCCGCATaGACATCCAGCGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNVFLSA*TSSVST
Trigger: TGTGGACACGCTGGATGTGCATGCGGACAGGAATAC...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACGCTCTCCTCCAAGTCTaGCATCACCTCCTTGATGAT +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHALLQV*HHLLDD
Trigger: ATCATCAAGGAGGTGATGGCAGACTTGGAGGAGAGC...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATGGACAGCCGGAGCTCTaGATTCTGGTATTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNGQPEL*ILVFAL
Trigger: GAGAGCAAATACCAGAATGCAGAGCTCCGGCTGTCC...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAAGCAAAACGTGCATCTaGAATTTGGAGCTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTSKTCI*NLELRY
Trigger: GTACCTGAGCTCCAAATTCCAGATGCACGTTTTGCT...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATGGATGTCTGGCACGTTaGTACGGCGGATATCATTGC +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNGCLAR*YGGYHC
Trigger: GCAATGATATCCGCCGTACCAACGTGCCAGACATCC...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGAATTTGTCAAATCGATaGAAGGTATTCCTGTCCGCA +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPENLSNR*KVFLSA
Trigger: TGCGGACAGGAATACCTTTCATCGATTTGACAAATT...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGGTCTTCAGGAAATCTTaGTTGGCTCGAAGAAGAATA +
Preference number: 4 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEVFRKS*LARRRI
Trigger: TATTCTTCTTCGAGCCAAGCAAGATTTCCTGAAGAC...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATTTGGTGAAGTGGAACTaGAAGGGATCATCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNLVKWN*KGSSVD
Trigger: GTCCACAGATGATCCCTTGCAGTTCCACTTCACCAA...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATTCCAGCATCTCACTTTaGACGGCCTGTGTGATAAGT +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNSSISL*TACVIS
Trigger: ACTTATCACACAGGCCGTCCAAAGTGAGATGCTGGA...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR GCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACGTCTTCAGGAAATCTTaGTTGGCTCGAAGAAGAATA +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHVFRKS*LARRRI
Trigger: TATTCTTCTTCGAGCCAAGCAAGATTTCCTGAAGAC...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CCA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACTCAGGAAATCTTGCTTaGCTCGAAGAAGAATATCTG +
Preference number: 4 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHSGNLA*LEEEYL
Trigger: CAGATATTCTTCTTCGAGCCAAGCAAGATTTCCTGA...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR TCA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATAATTTGTCAAATCGATaGAAGGTATTCCTGTCCGCA +
Preference number: 4 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNNLSNR*KVFLSA
Trigger: TGCGGACAGGAATACCTTTCATCGATTTGACAAATT...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 90 bp CATCAGGGTCCCTGCGGGTGTAGACGTGCACCACACCACGCACCATaGGCAGACCCAAGCCCAGGTCCCCAGGCATGGCGCTTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: HQGPCGCRRAPHHAP*ADPSPGPQAWRLAH
Trigger: GTGAGCCAAGCGCCATGCCTGGGGACCTGGGCTTGGGTCTGCGCATGGTGCGTGGTGTGGTGCACGTCTACACCCGCAGGGACCCTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 90 bp ACGCACCATGCGCAGACCCAAGCCCAGGTCCCCAGGCATGGCGCTTaGCTCACAGTGCTCATACGGGTGCTGCTCCAGTGCAGGGGGATG +
Preference number: 5 (lower is better)
Translates to: THHAQTQAQVPRHGA*LTVLIRVLLQCRGM
Trigger: CATCCCCCTGCACTGGAGCAGCACCCGTATGAGCACTGTGAGCCAAGCGCCATGCCTGGGGACCTGGGCTTGGGTCTGCGCATGGTGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 90 bp CCACACCACGCACCATGCGCAGACCCAAGCCCAGGTCCCCAGGCATaGCGCTTGGCTCACAGTGCTCATACGGGTGCTGCTCCAGTGCAG +
Preference number: 5 (lower is better)
Translates to: PHHAPCADPSPGPQA*RLAHSAHTGAAPVQ
Trigger: CTGCACTGGAGCAGCACCCGTATGAGCACTGTGAGCCAAGCGCCATGCCTGGGGACCTGGGCTTGGGTCTGCGCATGGTGCGTGGTGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTGCCCAGCGTGCCAGCTaGTCCCACTCATCCCTCGAA +
Preference number: 5 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAAQRAS*SHSSLE
Trigger: TTCGAGGGATGAGTGGGACAAGCTGGCACGCTGGGC...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAAGCGGCAGCGGAAGCTaGCAGGCCGGCCCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGSGSGS*QAGPLL
Trigger: AAGAAGCGGGCCGGCCTGCAAGCTTCCGCTGCCGCT...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000078912.7
CDS-3UTR CAA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGATGCAGGACGGGGGCCTaGCGCAGGAGCAGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGCRTGA*RRSSPW
Trigger: CCACGGGCTGCTCCTGCGCAAGGCCCCCGTCCTGCA...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTGTACGGCGGATATCATaGCCCTCAGGGCCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAVRRIS*PSGPSL
Trigger: CAAGGAGGGCCCTGAGGGCAATGATATCCGCCGTAC...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 90 bp CAGGGTATGGAAGCTCCACCTCCGGACAGTGCTCATCAGGGTCCCTaGGGGTGTAGACGTGCACCACACCACGCACCATGCGCAGACCCA +
Preference number: 5 (lower is better)
Translates to: QGMEAPPPDSAHQGP*GCRRAPHHAPCADP
Trigger: TGGGTCTGCGCATGGTGCGTGGTGTGGTGCACGTCTACACCCGCAGGGACCCTGATGAGCACTGTCCGGAGGTGGAGCTTCCATACCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 90 bp GAGGCCCCCAGACCGCTTCGAGCTTCTGGAGCGGCAGCGGAAGCTTaGAGGCCGGCCCGCTTCTTAAAGGGATATTTGGCCTTGGACTTG +
Preference number: 5 (lower is better)
Translates to: EAPRPLRASGAAAEA*RPARFLKGYLALDL
Trigger: CAAGTCCAAGGCCAAATATCCCTTTAAGAAGCGGGCCGGCCTGCAAGCTTCCGCTGCCGCTCCAGAAGCTCGAAGCGGTCTGGGGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078912.7
CDS-3UTR CAA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTCGCTTCATGGCCCGCTaGATGAAGCGCAGTAGATGT +
Preference number: 5 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPARFMAR*MKRSRC
Trigger: ACATCTACTGCGCTTCATCAAGCGGGCCATGAAGCG...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 90 bp CTGCACCAGCCAGCGGACATTGGGAGAGTGCACTTTGTGGTTCACTaGCCAGCGTGCCAGCTTGTCCCACTCATCCCTCGAACGCCCGTA +
Preference number: 5 (lower is better)
Translates to: LHQPADIGRVHFVVH*PACQLVPLIPRTPV
Trigger: TACGGGCGTTCGAGGGATGAGTGGGACAAGCTGGCACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCGCTGGCTGGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 90 bp GGTAGCCCACTCGGATGTCTGGCACGTTGGTACGGCGGATATCATTaGCCTCAGGGCCCTCCTTGGTATAGTTGGGTCCCAGCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: GSPLGCLARWYGGYH*PQGPPWYSWVPASG
Trigger: GCCACTGGCTGGGACCCAACTATACCAAGGAGGGCCCTGAGGGCAATGATATCCGCCGTACCAACGTGCCAGACATCCGAGTGGGCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 90 bp TCTCCAGGGGCTTCTCAGCCAGCTGCTGCAGGTAACGGCGGGTGGTaGGACAGAAGCTCTGCAGTGATAGGGCCATGTACTTCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: SPGASQPAAAGNGGW*DRSSAVIGPCTSPG
Trigger: TCCGGGAGAAGTACATGGCCCTATCACTGCAGAGCTTCTGTCCCACCACCCGCCGTTACCTGCAGCAGCTGGCTGAGAAGCCCCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 90 bp GAGTCTCCAGGGGCTTCTCAGCCAGCTGCTGCAGGTAACGGCGGGTaGTGGGACAGAAGCTCTGCAGTGATAGGGCCATGTACTTCTCCC +
Preference number: 5 (lower is better)
Translates to: ESPGASQPAAAGNGG*WDRSSAVIGPCTSP
Trigger: GGGAGAAGTACATGGCCCTATCACTGCAGAGCTTCTGTCCCACCACCCGCCGTTACCTGCAGCAGCTGGCTGAGAAGCCCCTGGAGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 90 bp GGTACACATCGAAGAGGCGGGGCACCTGCACCAGCCAGCGGACATTaGGAGAGTGCACTTTGTGGTTCACTGCCCAGCGTGCCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: GTHRRGGAPAPASGH*ESALCGSLPSVPAC
Trigger: ACAAGCTGGCACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCGCTGGCTGGTGCAGGTGCCCCGCCTCTTCGATGTGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTATATCTGGCTCCAGCTaGACATCCTGGCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPAISGSS*TSWLIW
Trigger: CCAGATCAGCCAGGATGTCAAGCTGGAGCCAGATAT...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGCCCCAGGCATGGCGCTaGGCTCACAGTGCTCATACG +
Preference number: 5 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTPQAWR*AHSAHT
Trigger: CGTATGAGCACTGTGAGCCAAGCGCCATGCCTGGGG...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGGCCCAGCGTGCCAGCTaGTCCCACTCATCCCTCGAA +
Preference number: 5 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTAQRAS*SHSSLE
Trigger: TTCGAGGGATGAGTGGGACAAGCTGGCACGCTGGGC...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGCCCAGCGTGCCAGCTaGTCCCACTCATCCCTCGAA +
Preference number: 5 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNAQRAS*SHSSLE
Trigger: TTCGAGGGATGAGTGGGACAAGCTGGCACGCTGGGC...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 90 bp TCCTTGCATTTGCCATCCATAGACGTGCGCAGGTCAAGCGGGAAGTaGTTGAGGCAAGGGGCGTTGCCTGGCAGGGATCGGGCAGACTGT +
Preference number: 5 (lower is better)
Translates to: SLHLPSIDVRRSSGK*LRQGALPGRDRADC
Trigger: ACAGTCTGCCCGATCCCTGCCAGGCAACGCCCCTTGCCTCAAGCACTTCCCGCTTGACCTGCGCACGTCTATGGATGGCAAATGCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 90 bp CCAGCGGACATTGGGAGAGTGCACTTTGTGGTTCACTGCCCAGCGTaGCAGCTTGTCCCACTCATCCCTCGAACGCCCGTAGATGGACAG +
Preference number: 5 (lower is better)
Translates to: PADIGRVHFVVHCPA*QLVPLIPRTPVDGQ
Trigger: CTGTCCATCTACGGGCGTTCGAGGGATGAGTGGGACAAGCTGGCACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACTCAAGCGGGAAGTGCTaGAGGCAAGGGGCGTTGCCT +
Preference number: 5 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNSSGKC*RQGALP
Trigger: AGGCAACGCCCCTTGCCTCAAGCACTTCCCGCTTGA...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACTTGGCCAGCTGGCCCTaGGTGCGGTACACATCGAAG +
Preference number: 5 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNLASWP*VRYTSK
Trigger: CTTCGATGTGTACCGCACCAAGGGCCAGCTGGCCAA...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGTTCTCCAGCATCTCTaGGAAGTTGGCCAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGVLQHL*EVGQLA
Trigger: GGCCAGCTGGCCAACTTCCAAGAGATGCTGGAGAAC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 90 bp CTCTCGAAGACTTCTCTCAGCGTCTGCTCGCGGCCCTGTTCCACATaGACAATCTCCTCCAGGTGCCGCTTCATGGCCCGCTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: LSKTSLSVCSRPCST*TISSRCRFMARLMK
Trigger: CTTCATCAAGCGGGCCATGAAGCGGCACCTGGAGGAGATTGTGCATGTGGAACAGGGCCGCGAGCAGACGCTGAGAGAAGTCTTCGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAACCCCAGGCATGGCGCTaGGCTCACAGTGCTCATACG +
Preference number: 5 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQPQAWR*AHSAHT
Trigger: CGTATGAGCACTGTGAGCCAAGCGCCATGCCTGGGG...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCCCCAGGCATGGCGCTaGGCTCACAGTGCTCATACG +
Preference number: 5 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEPQAWR*AHSAHT
Trigger: CGTATGAGCACTGTGAGCCAAGCGCCATGCCTGGGG...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGATTGGGAGAGTGCACTTaGTGGTTCACTGCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGLGECT*WFTAQR
Trigger: ACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAA...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGATTGGCCAGCTGGCCCTaGGTGCGGTACACATCGAAG +
Preference number: 5 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGLASWP*VRYTSK
Trigger: CTTCGATGTGTACCGCACCAAGGGCCAGCTGGCCAA...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGGTTCTCCAGCATCTCTaGGAAGTTGGCCAGCTGGCC +
Preference number: 5 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTVLQHL*EVGQLA
Trigger: GGCCAGCTGGCCAACTTCCAAGAGATGCTGGAGAAC...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATTGCAGGACGGGGGCCTaGCGCAGGAGCAGCCCGTGG +
Preference number: 5 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNCRTGA*RRSSPW
Trigger: CCACGGGCTGCTCCTGCGCAAGGCCCCCGTCCTGCA...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACCTGAGGAACAGGCTGTaGTTGCTGAGCGGGGACATG +
Preference number: 5 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNLRNRL*LLSGDM
Trigger: CATGTCCCCGCTCAGCAACAACAGCCTGTTCCTCAG...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAATCAAGCGGGAAGTGCTaGAGGCAAGGGGCGTTGCCT +
Preference number: 5 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQSSGKC*RQGALP
Trigger: AGGCAACGCCCCTTGCCTCAAGCACTTCCCGCTTGA...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGAACCAGCCAGCGGACATaGGGAGAGTGCACTTTGTGG +
Preference number: 5 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGTSQRT*GECTLW
Trigger: CCACAAAGTGCACTCTCCCAATGTCCGCTGGCTGGT...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAAGGAACAGGCTGTTGTaGCTGAGCGGGGACATGGCG +
Preference number: 5 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQRNRLL*LSGDMA
Trigger: CGCCATGTCCCCGCTCAGCAACAACAGCCTGTTCCT...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGTCCATCAGGGGCTCCTaGGTGAAGTGGAACTGCAAG +
Preference number: 5 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTSIRGS*VKWNCK
Trigger: CTTGCAGTTCCACTTCACCAAGGAGCCCCTGATGGA...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACTCCATCAGGGGCTCCTaGGTGAAGTGGAACTGCAAG +
Preference number: 5 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNSIRGS*VKWNCK
Trigger: CTTGCAGTTCCACTTCACCAAGGAGCCCCTGATGGA...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAGTACGGCGGATATCATaGCCCTCAGGGCCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQVRRIS*PSGPSL
Trigger: CAAGGAGGGCCCTGAGGGCAATGATATCCGCCGTAC...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS TCA 90 bp TGTCCGCATGCACATCCAGCGTGTCCACACTTAAGTCGTAGGCAGTaGGGTTCATGCTCTCGAAGACTTCTCTCAGCGTCTGCTCGCGGC +
Preference number: 5 (lower is better)
Translates to: CPHAHPACPHLSRRQ*GSCSRRLLSASARG
Trigger: GCCGCGAGCAGACGCTGAGAGAAGTCTTCGAGAGCATGAACCTCACTGCCTACGACTTAAGTGTGGACACGCTGGATGTGCATGCGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 90 bp CTCACAGTGCTCATACGGGTGCTGCTCCAGTGCAGGGGGATGCACTaGGGCATCAGCAGATACAGGGGTATCAGGACTCTGCTCATAAGT +
Preference number: 5 (lower is better)
Translates to: LTVLIRVLLQCRGMH*GISRYRGIRTLLIS
Trigger: ACTTATGAGCAGAGTCCTGATACCCCTGTATCTGCTGATGCCCCAGTGCATCCCCCTGCACTGGAGCAGCACCCGTATGAGCACTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 90 bp CTATCAAAACCATCCACGTGCTCCAGAAAGAGGTGCAGCTCCGGGTaGCTGGCAGGGTGCACAGTAGCCTCAAACAGGGGCAGAAAGATG +
Preference number: 5 (lower is better)
Translates to: LSKPSTCSRKRCSSG*LAGCTVASNRGRKM
Trigger: CATCTTTCTGCCCCTGTTTGAGGCTACTGTGCACCCTGCCAGCCACCCGGAGCTGCACCTCTTTCTGGAGCACGTGGATGGTTTTGATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GCCTCCAGGGCCGTGAGTGAGCCTAAGTCCTGCTCTGCCCAGCGCAGACCAGCTTGTCTTCAGGAAATCTaGCTTGGCTCGAAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: ASRAVSEPKSCSAQRRPACLQEI*LGSKKN
Trigger: ATTCTTCTTCGAGCCAAGCAAGATTTCCTGAAGACA...AGCTGGTCTGCGCTGGGCAGAGCAGGACTTAGGCTCACTCACGGCCCTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGACGTGCATCTGGAATTaGGAGCTCAGGTACTGCAGC +
Preference number: 5 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTTCIWN*ELRYCS
Trigger: GCTGCAGTACCTGAGCTCCAAATTCCAGATGCACGT...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGACGCTTCATGGCCCGCTaGATGAAGCGCAGTAGATGT +
Preference number: 5 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGRFMAR*MKRSRC
Trigger: ACATCTACTGCGCTTCATCAAGCGGGCCATGAAGCG...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGATCTGCATTCTGGTATTaGCTCTCCTCCAAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGSAFWY*LSSKSA
Trigger: GGCAGACTTGGAGGAGAGCAAATACCAGAATGCAGA...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAACCAGCCAGCGGACATaGGGAGAGTGCACTTTGTGG +
Preference number: 5 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQTSQRT*GECTLW
Trigger: CCACAAAGTGCACTCTCCCAATGTCCGCTGGCTGGT...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAGCATCTCTTGGAAGTaGGCCAGCTGGCCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSSISWK*ASWPLV
Trigger: CACCAAGGGCCAGCTGGCCAACTTCCAAGAGATGCT...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGACGGATGTCTGGCACGTaGGTACGGCGGATATCATTG +
Preference number: 5 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGRMSGT*VRRISL
Trigger: CAATGATATCCGCCGTACCAACGTGCCAGACATCCG...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 90 bp TGGTACGGCGGATATCATTGCCCTCAGGGCCCTCCTTGGTATAGTTaGGTCCCAGCCAGTGGCTTTTCACCTTGTGAGAGAAGCCACTCA +
Preference number: 5 (lower is better)
Translates to: WYGGYHCPQGPPWYS*VPASGFSPCERSHS
Trigger: TGAGTGGCTTCTCTCACAAGGTGAAAAGCCACTGGCTGGGACCCAACTATACCAAGGAGGGCCCTGAGGGCAATGATATCCGCCGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGGGATATTTGGCCTaGGACTTGCCTGGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSKGYLA*DLPGPG
Trigger: TCCTGGCCCAGGCAAGTCCAAGGCCAAATATCCCTT...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078912.7
CDS-3UTR CAA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGGCGATCTCCTTGCATTaGCCATCCATAGACGTGCGC +
Preference number: 5 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSAISLH*PSIDVR
Trigger: GCGCACGTCTATGGATGGCAAATGCAAGGAGATCGC...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAGCGATCTCCTTGCATTaGCCATCCATAGACGTGCGC +
Preference number: 5 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQAISLH*PSIDVR
Trigger: GCGCACGTCTATGGATGGCAAATGCAAGGAGATCGC...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGTCCTCAGCGATCTCCTaGCATTTGCCATCCATAGAC +
Preference number: 5 (lower is better)
Translates to: HRDTRGLVTKEHVGWGGTSSAIS*HLPSID
Trigger: GTCTATGGATGGCAAATGCAAGGAGATCGCTGAGGA...CGTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAAGCTCCTTCATCTCATaGAGCAAAACGTGCATCTGG +
Preference number: 5 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGSSFIS*SKTCIW
Trigger: CCAGATGCACGTTTTGCTCAATGAGATGAAGGAGCT...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCGCTTCATGGCCCGCTaGATGAAGCGCAGTAGATGT +
Preference number: 5 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPERFMAR*MKRSRC
Trigger: ACATCTACTGCGCTTCATCAAGCGGGCCATGAAGCG...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACTCTGCATTCTGGTATTaGCTCTCCTCCAAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNSAFWY*LSSKSA
Trigger: GGCAGACTTGGAGGAGAGCAAATACCAGAATGCAGA...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGTTGGGAGAGTGCACTTaGTGGTTCACTGCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSLGECT*WFTAQR
Trigger: ACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAA...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAACCAGCCAGCGGACATaGGGAGAGTGCACTTTGTGG +
Preference number: 5 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTTSQRT*GECTLW
Trigger: CCACAAAGTGCACTCTCCCAATGTCCGCTGGCTGGT...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAAGCATCTCTTGGAAGTaGGCCAGCTGGCCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTSISWK*ASWPLV
Trigger: CACCAAGGGCCAGCTGGCCAACTTCCAAGAGATGCT...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCGGATGTCTGGCACGTaGGTACGGCGGATATCATTG +
Preference number: 5 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPERMSGT*VRRISL
Trigger: CAATGATATCCGCCGTACCAACGTGCCAGACATCCG...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGACTCCAGCATCTCACTTaGGACGGCCTGTGTGATAAG +
Preference number: 5 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGLQHLT*DGLCDK
Trigger: CTTATCACACAGGCCGTCCAAAGTGAGATGCTGGAG...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 90 bp ATGACAATGCCCACTTCCTCTGGGATGGTCTCCAGCATCTCACTTTaGACGGCCTGTGTGATAAGTGCCAGCTCCTGGCATAGCGTCTCA +
Preference number: 5 (lower is better)
Translates to: MTMPTSSGMVSSISL*TACVISASSWHSVS
Trigger: TGAGACGCTATGCCAGGAGCTGGCACTTATCACACAGGCCGTCCAAAGTGAGATGCTGGAGACCATCCCAGAGGAAGTGGGCATTGTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GCCAGCCCTACACAACCATCCCAAGCCCCTGTGGACACTGAGGATACCATAGGATCCTCAGCGATCTCCTaGCATTTGCCATCCATAGAC +
Preference number: 5 (lower is better)
Translates to: ASPTQPSQAPVDTEDTIGSSAIS*HLPSID
Trigger: GTCTATGGATGGCAAATGCAAGGAGATCGCTGAGGA...TCCTATGGTATCCTCAGTGTCCACAGGGGCTTGGGATGGTTGTGTAGGGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTATATCTGGCTCCAGCTaGACATCCTGGCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: GLVKDLETPKEGATSRASISGSS*TSWLIW
Trigger: CCAGATCAGCCAGGATGTCAAGCTGGAGCCAGATAT...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGCCCTCTCCTTGCTCCTaGTACAGCTGTAAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSPSPCS*YSCKSE
Trigger: CTCAGACTTACAGCTGTACAAGGAGCAAGGAGAGGG...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AACTGGGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCCCTCTCCTTGCTCCTaGTACAGCTGTAAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: NWVWSKTWKPPKKVPPPEPSPCS*YSCKSE
Trigger: CTCAGACTTACAGCTGTACAAGGAGCAAGGAGAGGG...CTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACCCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGACGTGCATCTGGAATTaGGAGCTCAGGTACTGCAGC +
Preference number: 5 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSTCIWN*ELRYCS
Trigger: GCTGCAGTACCTGAGCTCCAAATTCCAGATGCACGT...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GGTCTGGTCAAAGACCTGGAAACCCCCAAAGAAGGTGCCACCTCCAGAGCTAGTACGTGCATCTGGAATTaGGAGCTCAGGTACTGCAGC +
Preference number: 5 (lower is better)
Translates to: GLVKDLETPKEGATSRASTCIWN*ELRYCS
Trigger: GCTGCAGTACCTGAGCTCCAAATTCCAGATGCACGT...ACTAGCTCTGGAGGTGGCACCTTCTTTGGGGGTTTCCAGGTCTTTGACCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACATTGGGAGAGTGCACTTaGTGGTTCACTGCCCAGCGT +
Preference number: 5 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTLGECT*WFTAQR
Trigger: ACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAA...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACAGGAACAGGCTGTTGTaGCTGAGCGGGGACATGGCG +
Preference number: 5 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHRNRLL*LSGDMA
Trigger: CGCCATGTCCCCGCTCAGCAACAACAGCCTGTTCCT...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAACTCCAGCATCTCACTTaGGACGGCCTGTGTGATAAG +
Preference number: 5 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQLQHLT*DGLCDK
Trigger: CTTATCACACAGGCCGTCCAAAGTGAGATGCTGGAG...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS TCA 90 bp TGGGACAGAAGCTCTGCAGTGATAGGGCCATGTACTTCTCCCGGATaGAAAGTGCCCGAACCACACTTTTGGCTGCGTCTAAGAGGTCTG +
Preference number: 5 (lower is better)
Translates to: WDRSSAVIGPCTSPG*KVPEPHFWLRLRGL
Trigger: CAGACCTCTTAGACGCAGCCAAAAGTGTGGTTCGGGCACTTTTCATCCGGGAGAAGTACATGGCCCTATCACTGCAGAGCTTCTGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS TCA 90 bp CCCGGTGTGGCACTTTCTTCTGAGCAGCGAGCTCCTTCATCTCATTaGGCAAAACGTGCATCTGGAATTTGGAGCTCAGGTACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: PGVALSSEQRAPSSH*AKRASGIWSSGTAA
Trigger: GGCTGCAGTACCTGAGCTCCAAATTCCAGATGCACGTTTTGCTCAATGAGATGAAGGAGCTCGCTGCTCAGAAGAAAGTGCCACACCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGACTCCCCAATAGGGTaGTATTTGGCATTGAATTTG +
Preference number: 5 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGDSPIG*YLALNL
Trigger: CAAATTCAATGCCAAATACAACCCTATTGGGGAGTC...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACAGCATCTCTTGGAAGTaGGCCAGCTGGCCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHSISWK*ASWPLV
Trigger: CACCAAGGGCCAGCTGGCCAACTTCCAAGAGATGCT...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATAGGAACAGGCTGTTGTaGCTGAGCGGGGACATGGCG +
Preference number: 5 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNRNRLL*LSGDMA
Trigger: CGCCATGTCCCCGCTCAGCAACAACAGCCTGTTCCT...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACCTGAGGAACAGGCTGTaGTTGCTGAGCGGGGACATG +
Preference number: 5 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHLRNRL*LLSGDM
Trigger: CATGTCCCCGCTCAGCAACAACAGCCTGTTCCTCAG...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATGTACGGCGGATATCATaGCCCTCAGGGCCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNVRRIS*PSGPSL
Trigger: CAAGGAGGGCCCTGAGGGCAATGATATCCGCCGTAC...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACACTCCAGCATCTCACTTaGGACGGCCTGTGTGATAAG +
Preference number: 5 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTLQHLT*DGLCDK
Trigger: CTTATCACACAGGCCGTCCAAAGTGAGATGCTGGAG...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCCTCCCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGATTCAGGAAATCTTGCTaGGCTCGAAGAAGAATATCT +
Preference number: 5 (lower is better)
Translates to: PSHRDTRGLVTKEHVGWGFRKSC*ARRRIS
Trigger: AGATATTCTTCTTCGAGCCAAGCAAGATTTCCTGAA...TCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACTGTCTTCAGGAAATCTaGCTTGGCTCGAAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNCLQEI*LGSKKN
Trigger: ATTCTTCTTCGAGCCAAGCAAGATTTCCTGAAGACA...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAAAGCTCCTTCATCTCATaGAGCAAAACGTGCATCTGG +
Preference number: 5 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQSSFIS*SKTCIW
Trigger: CCAGATGCACGTTTTGCTCAATGAGATGAAGGAGCT...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCAGATTCCTGGACTTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAGCTCCTTCATCTCATaGAGCAAAACGTGCATCTGG +
Preference number: 5 (lower is better)
Translates to: SRFLDLLSLRWPRGKTWSSSFIS*SKTCIW
Trigger: CCAGATGCACGTTTTGCTCAATGAGATGAAGGAGCT...CGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAAGTCCAGGAATCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACGACTCCCCAATAGGGTaGTATTTGGCATTGAATTTG +
Preference number: 5 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNDSPIG*YLALNL
Trigger: CAAATTCAATGCCAAATACAACCCTATTGGGGAGTC...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATGCGATCTCCTTGCATTaGCCATCCATAGACGTGCGC +
Preference number: 5 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNAISLH*PSIDVR
Trigger: GCGCACGTCTATGGATGGCAAATGCAAGGAGATCGC...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp CCACAGGGATACAAGGGGGCTGGTAACAAAGGAACACGTGGGCTGGGGAGGAACTTCAGGAAATCTTGCTaGGCTCGAAGAAGAATATCT +
Preference number: 5 (lower is better)
Translates to: PQGYKGAGNKGTRGLGRNFRKSC*ARRRIS
Trigger: AGATATTCTTCTTCGAGCCAAGCAAGATTTCCTGAA...GTTCCTCCCCAGCCCACGTGTTCCTTTGTTACCAGCCCCCTTGTATCCCTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACCCCTCTCCTTGCTCCTaGTACAGCTGTAAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHPSPCS*YSCKSE
Trigger: CTCAGACTTACAGCTGTACAAGGAGCAAGGAGAGGG...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 90 bp GTGGATGTGTGTGTCCACCTTACGGATATTGTAGAAGTCCCGGTGTaGCACTTTCTTCTGAGCAGCGAGCTCCTTCATCTCATTGAGCAA +
Preference number: 5 (lower is better)
Translates to: VDVCVHLTDIVEVPV*HFLLSSELLHLIEQ
Trigger: TTGCTCAATGAGATGAAGGAGCTCGCTGCTCAGAAGAAAGTGCCACACCGGGACTTCTACAATATCCGTAAGGTGGACACACACATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp TCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATCTCAGCCACTCCTCAGCGATCTCCTaGCATTTGCCATCCATAGAC +
Preference number: 5 (lower is better)
Translates to: SDNSEMGHEQGQLLNLSHSSAIS*HLPSID
Trigger: GTCTATGGATGGCAAATGCAAGGAGATCGCTGAGGA...GTGGCTGAGATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATATATCTGGCTCCAGCTaGACATCCTGGCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNISGSS*TSWLIW
Trigger: CCAGATCAGCCAGGATGTCAAGCTGGAGCCAGATAT...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp GGCCTCGGTCTAGAACATAACACAAGAGGCTGGCTGGGAACTGGGTCTGGTCAATGTCTTCAGGAAATCTaGCTTGGCTCGAAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: GLGLEHNTRGWLGTGSGQCLQEI*LGSKKN
Trigger: ATTCTTCTTCGAGCCAAGCAAGATTTCCTGAAGACA...TTGACCAGACCCAGTTCCCAGCCAGCCTCTTGTGTTATGTTCTAGACCGAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp TTGCTTTCACTGAGGTGGCCCAGAGGCAAGACATGGTCGAAGACATGCAGGACAGACTCCCCAATAGGGTaGTATTTGGCATTGAATTTG +
Preference number: 5 (lower is better)
Translates to: LLSLRWPRGKTWSKTCRTDSPIG*YLALNL
Trigger: CAAATTCAATGCCAAATACAACCCTATTGGGGAGTC...TGTCCTGCATGTCTTCGACCATGTCTTGCCTCTGGGCCACCTCAGTGAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATTCTGCATTCTGGTATTaGCTCTCCTCCAAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNSAFWY*LSSKSA
Trigger: GGCAGACTTGGAGGAGAGCAAATACCAGAATGCAGA...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 90 bp TTGTACAGCTGTAAGTCTGAGTCGCTGTCTGTCTTCAGGAAATCTTaGTTGGCTCGAAGAAGAATATCTGGCTCCAGCTTGACATCCTGG +
Preference number: 5 (lower is better)
Translates to: LYSCKSESLSVFRKS*LARRRISGSSLTSW
Trigger: CCAGGATGTCAAGCTGGAGCCAGATATTCTTCTTCGAGCCAAGCAAGATTTCCTGAAGACAGACAGCGACTCAGACTTACAGCTGTACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS-3UTR CAA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATTTCTTAAAGGGATATTaGGCCTTGGACTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNFLKGY*ALDLPG
Trigger: CCCAGGCAAGTCCAAGGCCAAATATCCCTTTAAGAA...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078912.7
CDS-3UTR CAA 90 bp AGCCAGACTTCTGACAATTCTGAGATGGGTCACGAGCAGGGCCAACTCTTAAATTTCAGGAAATCTTGCTaGGCTCGAAGAAGAATATCT +
Preference number: 5 (lower is better)
Translates to: SQTSDNSEMGHEQGQLLNFRKSC*ARRRIS
Trigger: AGATATTCTTCTTCGAGCCAAGCAAGATTTCCTGAA...ATTTAAGAGTTGGCCCTGCTCGTGACCCATCTCAGAATTGTCAGAAGTCTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 72 bp GCGCAGACCCAAGCCCAGGTCCCCAGGCATGGCGCTTaGCTCACAGTGCTCATACGGGTGCTGCTCCAGTGC +
Preference number: 6 (lower is better)
Translates to: AQTQAQVPRHGA*LTVLIRVLLQC
Trigger: GCACTGGAGCAGCACCCGTATGAGCACTGTGAGCCAAGCGCCATGCCTGGGGACCTGGGCTTGGGTCTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 90 bp CACGCACCATGCGCAGACCCAAGCCCAGGTCCCCAGGCATGGCGCTaGGCTCACAGTGCTCATACGGGTGCTGCTCCAGTGCAGGGGGAT +
Preference number: 6 (lower is better)
Translates to: HAPCADPSPGPQAWR*AHSAHTGAAPVQGD
Trigger: ATCCCCCTGCACTGGAGCAGCACCCGTATGAGCACTGTGAGCCAAGCGCCATGCCTGGGGACCTGGGCTTGGGTCTGCGCATGGTGCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp AAGCCCAGGTCCCCAGGCATGGCGCTTGGCTCACAGTaGTCATACGGGTGCTGCTCCAGTGCAGGGGGATGC +
Preference number: 6 (lower is better)
Translates to: KPRSPGMALGSQ*SYGCCSSAGGC
Trigger: GCATCCCCCTGCACTGGAGCAGCACCCGTATGAGCACTGTGAGCCAAGCGCCATGCCTGGGGACCTGGGCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 72 bp TGCGCAGACCCAAGCCCAGGTCCCCAGGCATGGCGCTaGGCTCACAGTGCTCATACGGGTGCTGCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: CADPSPGPQAWR*AHSAHTGAAPV
Trigger: CACTGGAGCAGCACCCGTATGAGCACTGTGAGCCAAGCGCCATGCCTGGGGACCTGGGCTTGGGTCTGCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 90 bp ATAGACGTGCGCAGGTCAAGCGGGAAGTGCTTGAGGCAAGGGGCGTaGCCTGGCAGGGATCGGGCAGACTGTAGCGGAGAGGCCCCCAGA +
Preference number: 6 (lower is better)
Translates to: IDVRRSSGKCLRQGA*PGRDRADCSGEAPR
Trigger: TCTGGGGGCCTCTCCGCTACAGTCTGCCCGATCCCTGCCAGGCAACGCCCCTTGCCTCAAGCACTTCCCGCTTGACCTGCGCACGTCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp GGCATGGCGCTTGGCTCACAGTGCTCATACGGGTGCTaGTCCAGTGCAGGGGGATGCACTGGGGCATCAGCA +
Preference number: 6 (lower is better)
Translates to: GMALGSQCSYGC*SSAGGCTGASA
Trigger: TGCTGATGCCCCAGTGCATCCCCCTGCACTGGAGCAGCACCCGTATGAGCACTGTGAGCCAAGCGCCATGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp GAAGCTCCACCTCCGGACAGTGCTCATCAGGGTCCCTaGGGGTGTAGACGTGCACCACACCACGCACCATGC +
Preference number: 6 (lower is better)
Translates to: EAPPPDSAHQGP*GCRRAPHHAPC
Trigger: GCATGGTGCGTGGTGTGGTGCACGTCTACACCCGCAGGGACCCTGATGAGCACTGTCCGGAGGTGGAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 72 bp CGAAGAGGCGGGGCACCTGCACCAGCCAGCGGACATTaGGAGAGTGCACTTTGTGGTTCACTGCCCAGCGTG +
Preference number: 6 (lower is better)
Translates to: RRGGAPAPASGH*ESALCGSLPSV
Trigger: CACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCGCTGGCTGGTGCAGGTGCCCCGCCTCTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 90 bp AGGCGGGGCACCTGCACCAGCCAGCGGACATTGGGAGAGTGCACTTaGTGGTTCACTGCCCAGCGTGCCAGCTTGTCCCACTCATCCCTC +
Preference number: 6 (lower is better)
Translates to: RRGTCTSQRTLGECT*WFTAQRASLSHSSL
Trigger: GAGGGATGAGTGGGACAAGCTGGCACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCGCTGGCTGGTGCAGGTGCCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 90 bp CGGTACACATCGAAGAGGCGGGGCACCTGCACCAGCCAGCGGACATaGGGAGAGTGCACTTTGTGGTTCACTGCCCAGCGTGCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: RYTSKRRGTCTSQRT*GECTLWFTAQRASL
Trigger: CAAGCTGGCACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCGCTGGCTGGTGCAGGTGCCCCGCCTCTTCGATGTGTACCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp ACTTCTCTCAGCGTCTGCTCGCGGCCCTGTTCCACATaGACAATCTCCTCCAGGTGCCGCTTCATGGCCCGC +
Preference number: 6 (lower is better)
Translates to: TSLSVCSRPCST*TISSRCRFMAR
Trigger: GCGGGCCATGAAGCGGCACCTGGAGGAGATTGTGCATGTGGAACAGGGCCGCGAGCAGACGCTGAGAGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp CCCTTGGTGCGGTACACATCGAAGAGGCGGGGCACCTaGACCAGCCAGCGGACATTGGGAGAGTGCACTTTG +
Preference number: 6 (lower is better)
Translates to: PLVRYTSKRRGT*TSQRTLGECTL
Trigger: CAAAGTGCACTCTCCCAATGTCCGCTGGCTGGTGCAGGTGCCCCGCCTCTTCGATGTGTACCGCACCAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 72 bp GGGGCTTCTCAGCCAGCTGCTGCAGGTAACGGCGGGTaGTGGGACAGAAGCTCTGCAGTGATAGGGCCATGT +
Preference number: 6 (lower is better)
Translates to: GASQPAAAGNGG*WDRSSAVIGPC
Trigger: ACATGGCCCTATCACTGCAGAGCTTCTGTCCCACCACCCGCCGTTACCTGCAGCAGCTGGCTGAGAAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 72 bp TCGAAGAGGCGGGGCACCTGCACCAGCCAGCGGACATaGGGAGAGTGCACTTTGTGGTTCACTGCCCAGCGT +
Preference number: 6 (lower is better)
Translates to: SKRRGTCTSQRT*GECTLWFTAQR
Trigger: ACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCGCTGGCTGGTGCAGGTGCCCCGCCTCTTCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 90 bp AGAGGCCCCCAGACCGCTTCGAGCTTCTGGAGCGGCAGCGGAAGCTaGCAGGCCGGCCCGCTTCTTAAAGGGATATTTGGCCTTGGACTT +
Preference number: 6 (lower is better)
Translates to: RGPQTASSFWSGSGS*QAGPLLKGIFGLGL
Trigger: AAGTCCAAGGCCAAATATCCCTTTAAGAAGCGGGCCGGCCTGCAAGCTTCCGCTGCCGCTCCAGAAGCTCGAAGCGGTCTGGGGGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000078912.7
CDS TCA 72 bp CGCTGTTACGGGCCAGCTCGCACATATCGCAGGAGCTaGGCTTCCACACCTGGGTGGCGATGCTGTACTCCT +
Preference number: 6 (lower is better)
Translates to: RCYGPARTYRRS*ASTPGWRCCTP
Trigger: AGGAGTACAGCATCGCCACCCAGGTGTGGAAGCTCAGCTCCTGCGATATGTGCGAGCTGGCCCGTAACAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp AGACCGCTTCGAGCTTCTGGAGCGGCAGCGGAAGCTTaGAGGCCGGCCCGCTTCTTAAAGGGATATTTGGCC +
Preference number: 6 (lower is better)
Translates to: RPLRASGAAAEA*RPARFLKGYLA
Trigger: GGCCAAATATCCCTTTAAGAAGCGGGCCGGCCTGCAAGCTTCCGCTGCCGCTCCAGAAGCTCGAAGCGGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078912.7
CDS GCA 72 bp GCTTGGCTCACAGTGCTCATACGGGTGCTGCTCCAGTaGAGGGGGATGCACTGGGGCATCAGCAGATACAGG +
Preference number: 6 (lower is better)
Translates to: AWLTVLIRVLLQ*RGMHWGISRYR
Trigger: CCTGTATCTGCTGATGCCCCAGTGCATCCCCCTGCACTGGAGCAGCACCCGTATGAGCACTGTGAGCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 72 bp GCTCCAGCCGCTGCCTCCGTTCTTCTAGCTGCTCGATaGGGCTTTCCTCTGGGAACTCATAAGGGGCGCTAC +
Preference number: 6 (lower is better)
Translates to: APAAASVLLAAR*GFPLGTHKGRY
Trigger: GTAGCGCCCCTTATGAGTTCCCAGAGGAAAGCCCCATCGAGCAGCTAGAAGAACGGAGGCAGCGGCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 72 bp TCTCCAGCATCTCTTGGAAGTTGGCCAGCTGGCCCTTaGTGCGGTACACATCGAAGAGGCGGGGCACCTGCA +
Preference number: 6 (lower is better)
Translates to: SPASLGSWPAGP*CGTHRRGGAPA
Trigger: TGCAGGTGCCCCGCCTCTTCGATGTGTACCGCACCAAGGGCCAGCTGGCCAACTTCCAAGAGATGCTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 72 bp CAGACCGCTTCGAGCTTCTGGAGCGGCAGCGGAAGCTaGCAGGCCGGCCCGCTTCTTAAAGGGATATTTGGC +
Preference number: 6 (lower is better)
Translates to: QTASSFWSGSGS*QAGPLLKGIFG
Trigger: GCCAAATATCCCTTTAAGAAGCGGGCCGGCCTGCAAGCTTCCGCTGCCGCTCCAGAAGCTCGAAGCGGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000078912.7
CDS CAA 72 bp ACCTGCACCAGCCAGCGGACATTGGGAGAGTGCACTTaGTGGTTCACTGCCCAGCGTGCCAGCTTGTCCCAC +
Preference number: 6 (lower is better)
Translates to: TCTSQRTLGECT*WFTAQRASLSH
Trigger: GTGGGACAAGCTGGCACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCGCTGGCTGGTGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 72 bp TTCTCCAGCATCTCTTGGAAGTTGGCCAGCTGGCCCTaGGTGCGGTACACATCGAAGAGGCGGGGCACCTGC +
Preference number: 6 (lower is better)
Translates to: FSSISWKLASWP*VRYTSKRRGTC
Trigger: GCAGGTGCCCCGCCTCTTCGATGTGTACCGCACCAAGGGCCAGCTGGCCAACTTCCAAGAGATGCTGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 90 bp TTGCATTTGCCATCCATAGACGTGCGCAGGTCAAGCGGGAAGTGCTaGAGGCAAGGGGCGTTGCCTGGCAGGGATCGGGCAGACTGTAGC +
Preference number: 6 (lower is better)
Translates to: LHLPSIDVRRSSGKC*RQGALPGRDRADCS
Trigger: GCTACAGTCTGCCCGATCCCTGCCAGGCAACGCCCCTTGCCTCAAGCACTTCCCGCTTGACCTGCGCACGTCTATGGATGGCAAATGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp CCAGCGGACATTGGGAGAGTGCACTTTGTGGTTCACTaGCCAGCGTGCCAGCTTGTCCCACTCATCCCTCGA +
Preference number: 6 (lower is better)
Translates to: PADIGRVHFVVH*PACQLVPLIPR
Trigger: TCGAGGGATGAGTGGGACAAGCTGGCACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp ACGCTATCAAAACCATCCACGTGCTCCAGAAAGAGGTaGAGCTCCGGGTGGCTGGCAGGGTGCACAGTAGCC +
Preference number: 6 (lower is better)
Translates to: TLSKPSTCSRKR*SSGWLAGCTVA
Trigger: GGCTACTGTGCACCCTGCCAGCCACCCGGAGCTGCACCTCTTTCTGGAGCACGTGGATGGTTTTGATAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 72 bp GCTTCTCAGCCAGCTGCTGCAGGTAACGGCGGGTGGTaGGACAGAAGCTCTGCAGTGATAGGGCCATGTACT +
Preference number: 6 (lower is better)
Translates to: ASQPAAAGNGGW*DRSSAVIGPCT
Trigger: AGTACATGGCCCTATCACTGCAGAGCTTCTGTCCCACCACCCGCCGTTACCTGCAGCAGCTGGCTGAGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 72 bp TGCACCAGCCAGCGGACATTGGGAGAGTGCACTTTGTaGTTCACTGCCCAGCGTGCCAGCTTGTCCCACTCA +
Preference number: 6 (lower is better)
Translates to: CTSQRTLGECTL*FTAQRASLSHS
Trigger: TGAGTGGGACAAGCTGGCACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAATGTCCGCTGGCTGGTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS TCA 72 bp GGAACTGCAAGGGATCATCTGTGGACAGCGAGACCATaGGGCCACGGGACAAGTACTCAGGGAGAGGGTTCC +
Preference number: 6 (lower is better)
Translates to: GTARDHLWTARP*GHGTSTQGEGS
Trigger: GGAACCCTCTCCCTGAGTACTTGTCCCGTGGCCTCATGGTCTCGCTGTCCACAGATGATCCCTTGCAGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp ATTGGGAGAGTGCACTTTGTGGTTCACTGCCCAGCGTaGCAGCTTGTCCCACTCATCCCTCGAACGCCCGTA +
Preference number: 6 (lower is better)
Translates to: IGRVHFVVHCPA*QLVPLIPRTPV
Trigger: TACGGGCGTTCGAGGGATGAGTGGGACAAGCTGGCACGCTGGGCAGTGAACCACAAAGTGCACTCTCCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp CTCGGATGTCTGGCACGTTGGTACGGCGGATATCATTaGCCTCAGGGCCCTCCTTGGTATAGTTGGGTCCCA +
Preference number: 6 (lower is better)
Translates to: LGCLARWYGGYH*PQGPPWYSWVP
Trigger: TGGGACCCAACTATACCAAGGAGGGCCCTGAGGGCAATGATATCCGCCGTACCAACGTGCCAGACATCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 72 bp AAGATGTTCTCCAGCATCTCTTGGAAGTTGGCCAGCTaGCCCTTGGTGCGGTACACATCGAAGAGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: KMFSSISWKLAS*PLVRYTSKRRG
Trigger: GCCCCGCCTCTTCGATGTGTACCGCACCAAGGGCCAGCTGGCCAACTTCCAAGAGATGCTGGAGAACATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS TCA 72 bp CTCATAAGGGGCGCTACGAAGCTCACTCTCAGCCAGTaGGCGGCTGAACAACTCCTCAGCGATCTCCTTGCA +
Preference number: 6 (lower is better)
Translates to: LIRGATKLTLSQ*AAEQLLSDLLA
Trigger: TGCAAGGAGATCGCTGAGGAGTTGTTCAGCCGCTCACTGGCTGAGAGTGAGCTTCGTAGCGCCCCTTATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS TCA 72 bp CCTCCACCCAAGCTTCTGGGAGGGGACTCTCCAGGTTaGAGACGTGGTTCTCTGGCTTGGACTCATCATCCA +
Preference number: 6 (lower is better)
Translates to: PPPKLLGGDSPG*RRGSLAWTHHP
Trigger: TGGATGATGAGTCCAAGCCAGAGAACCACGTCTTCAACCTGGAGAGTCCCCTCCCAGAAGCTTGGGTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS TCA 72 bp GCCAGTGGCTTTTCACCTTGTGAGAGAAGCCACTCATaGGCACGCTGTTACGGGCCAGCTCGCACATATCGC +
Preference number: 6 (lower is better)
Translates to: ASGFSPCERSHS*ARCYGPARTYR
Trigger: GCGATATGTGCGAGCTGGCCCGTAACAGCGTGCTCATGAGTGGCTTCTCTCACAAGGTGAAAAGCCACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp GTGAGGTTCATGCTCTCGAAGACTTCTCTCAGCGTCTaGTCGCGGCCCTGTTCCACATGCACAATCTCCTCC +
Preference number: 6 (lower is better)
Translates to: VRFMLSKTSLSV*SRPCSTCTISS
Trigger: GGAGGAGATTGTGCATGTGGAACAGGGCCGCGAGCAGACGCTGAGAGAAGTCTTCGAGAGCATGAACCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 72 bp CCAGCTTGTCCCACTCATCCCTCGAACGCCCGTAGATaGACAGCCGGAGCTCTGCATTCTGGTATTTGCTCT +
Preference number: 6 (lower is better)
Translates to: PACPTHPSNARR*TAGALHSGICS
Trigger: AGAGCAAATACCAGAATGCAGAGCTCCGGCTGTCCATCTACGGGCGTTCGAGGGATGAGTGGGACAAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 72 bp GCCAGTGAGCGGCTGAACAACTCCTCAGCGATCTCCTaGCATTTGCCATCCATAGACGTGCGCAGGTCAAGC +
Preference number: 6 (lower is better)
Translates to: ASERLNNSSAIS*HLPSIDVRRSS
Trigger: GCTTGACCTGCGCACGTCTATGGATGGCAAATGCAAGGAGATCGCTGAGGAGTTGTTCAGCCGCTCACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 72 bp TCCTCCACCCAAGCTTCTGGGAGGGGACTCTCCAGGTaGAAGACGTGGTTCTCTGGCTTGGACTCATCATCC +
Preference number: 6 (lower is better)
Translates to: SSTQASGRGLSR*KTWFSGLDSSS
Trigger: GGATGATGAGTCCAAGCCAGAGAACCACGTCTTCAACCTGGAGAGTCCCCTCCCAGAAGCTTGGGTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS GCA 72 bp TACTCCTCCATCAGGGGCTCCTTGGTGAAGTGGAACTaGAAGGGATCATCTGTGGACAGCGAGACCATGAGG +
Preference number: 6 (lower is better)
Translates to: YSSIRGSLVKWN*KGSSVDSETMR
Trigger: CCTCATGGTCTCGCTGTCCACAGATGATCCCTTGCAGTTCCACTTCACCAAGGAGCCCCTGATGGAGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 90 bp AGGGCCATGTACTTCTCCCGGATGAAAAGTGCCCGAACCACACTTTaGGCTGCGTCTAAGAGGTCTGTGAATGGCACCCCACACTTCTCC +
Preference number: 6 (lower is better)
Translates to: RAMYFSRMKSARTTL*AASKRSVNGTPHFS
Trigger: GGAGAAGTGTGGGGTGCCATTCACAGACCTCTTAGACGCAGCCAAAAGTGTGGTTCGGGCACTTTTCATCCGGGAGAAGTACATGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 72 bp GGATATCATTGCCCTCAGGGCCCTCCTTGGTATAGTTaGGTCCCAGCCAGTGGCTTTTCACCTTGTGAGAGA +
Preference number: 6 (lower is better)
Translates to: GYHCPQGPPWYS*VPASGFSPCER
Trigger: TCTCTCACAAGGTGAAAAGCCACTGGCTGGGACCCAACTATACCAAGGAGGGCCCTGAGGGCAATGATATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 72 bp CAAAGACCCCTGTCACCCTGTCCCTCTCCTTGCTCCTaGTACAGCTGTAAGTCTGAGTCGCTGTCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: QRPLSPCPSPCS*YSCKSESLSVF
Trigger: GAAGACAGACAGCGACTCAGACTTACAGCTGTACAAGGAGCAAGGAGAGGGACAGGGTGACAGGGGTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS TCA 72 bp ACCCCACACTTCTCCTCCCCAGAGATGATGACCCGCTaGAATTCCCGTTCCAATACCACATCACGTTCCCAA +
Preference number: 6 (lower is better)
Translates to: TPHFSSPEMMTR*NSRSNTTSRSQ
Trigger: TTGGGAACGTGATGTGGTATTGGAACGGGAATTTCAGCGGGTCATCATCTCTGGGGAGGAGAAGTGTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS TCA 72 bp AGCTCTGCAGTGATAGGGCCATGTACTTCTCCCGGATaGAAAGTGCCCGAACCACACTTTTGGCTGCGTCTA +
Preference number: 6 (lower is better)
Translates to: SSAVIGPCTSPG*KVPEPHFWLRL
Trigger: TAGACGCAGCCAAAAGTGTGGTTCGGGCACTTTTCATCCGGGAGAAGTACATGGCCCTATCACTGCAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS TCA 72 bp GCACATCCAGCGTGTCCACACTTAAGTCGTAGGCAGTaGGGTTCATGCTCTCGAAGACTTCTCTCAGCGTCT +
Preference number: 6 (lower is better)
Translates to: AHPACPHLSRRQ*GSCSRRLLSAS
Trigger: AGACGCTGAGAGAAGTCTTCGAGAGCATGAACCTCACTGCCTACGACTTAAGTGTGGACACGCTGGATGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 90 bp TCACGTTCCCAAAGACCCCTGTCACCCTGTCCCTCTCCTTGCTCCTaGTACAGCTGTAAGTCTGAGTCGCTGTCTGTCTTCAGGAAATCT +
Preference number: 6 (lower is better)
Translates to: SRSQRPLSPCPSPCS*YSCKSESLSVFRKS
Trigger: AGATTTCCTGAAGACAGACAGCGACTCAGACTTACAGCTGTACAAGGAGCAAGGAGAGGGACAGGGTGACAGGGGTCTTTGGGAACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CCA 72 bp TGTGTCCACCTTACGGATATTGTAGAAGTCCCGGTGTaGCACTTTCTTCTGAGCAGCGAGCTCCTTCATCTC +
Preference number: 6 (lower is better)
Translates to: CVHLTDIVEVPV*HFLLSSELLHL
Trigger: GAGATGAAGGAGCTCGCTGCTCAGAAGAAAGTGCCACACCGGGACTTCTACAATATCCGTAAGGTGGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 90 bp TACAGCTGTAAGTCTGAGTCGCTGTCTGTCTTCAGGAAATCTTGCTaGGCTCGAAGAAGAATATCTGGCTCCAGCTTGACATCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: YSCKSESLSVFRKSC*ARRRISGSSLTSWL
Trigger: CAGCCAGGATGTCAAGCTGGAGCCAGATATTCTTCTTCGAGCCAAGCAAGATTTCCTGAAGACAGACAGCGACTCAGACTTACAGCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS TCA 72 bp GCACTTTCTTCTGAGCAGCGAGCTCCTTCATCTCATTaGGCAAAACGTGCATCTGGAATTTGGAGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: ALSSEQRAPSSH*AKRASGIWSSG
Trigger: ACCTGAGCTCCAAATTCCAGATGCACGTTTTGCTCAATGAGATGAAGGAGCTCGCTGCTCAGAAGAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8
CDS CAA 72 bp AAGTCTGAGTCGCTGTCTGTCTTCAGGAAATCTTGCTaGGCTCGAAGAAGAATATCTGGCTCCAGCTTGACA +
Preference number: 6 (lower is better)
Translates to: KSESLSVFRKSC*ARRRISGSSLT
Trigger: TGTCAAGCTGGAGCCAGATATTCTTCTTCGAGCCAAGCAAGATTTCCTGAAGACAGACAGCGACTCAGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000078912.7
ENSMUST00000102637.8
ENSMUST00000102638.8