Pregenerated sensors for AMPD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070385Ensembl transcript IDs: ENSMUST00000090715.13, ENSMUST00000155034.6, ENSMUST00000176440.2, ENSMUST00000177250.2
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACTCAAATTAGTTCCTCGAAGGCTTGCGCTACCACTAAGCTGTATTCCCAGCCCCACACGTGCTCAGCTTaGAGACTTGCGCAGCGATGG | + |
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Preference number: 2 (lower is better) Translates to: TQISSSKACATTKLYSQPHTCSA*RLAQRW Trigger: CCATCGCTGCGCAAGTCTTCAAGCTGAGCACGTGTG...GGGCTGGGAATACAGCTTAGTGGTAGCGCAAGCCTTCGAGGAACTAATTTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR-3UTR CCA 90 bp | ACTCAAATTAGTTCCTCGAAGGCTTGCGCTACCACTAAGCTGTATTCCCAGCCCAGACTTGCGCAGCGATaGCGTATTCTTCCATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TQISSSKACATTKLYSQPRLAQR*RILPSG Trigger: CCCTGATGGAAGAATACGCCATCGCTGCGCAAGTCT...GGGCTGGGAATACAGCTTAGTGGTAGCGCAAGCCTTCGAGGAACTAATTTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR-3UTR GCA 90 bp | ACTCAAATTAGTTCCTCGAAGGCTTGCGCTACCACTAAGCTGTATTCCCAGCCCCTCAGCTTGAAGACTTaGGCAGCGATGGCGTATTCT | + |
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Preference number: 2 (lower is better) Translates to: TQISSSKACATTKLYSQPLSLKT*AAMAYS Trigger: AGAATACGCCATCGCTGCGCAAGTCTTCAAGCTGAG...GGGCTGGGAATACAGCTTAGTGGTAGCGCAAGCCTTCGAGGAACTAATTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR-3UTR CCA 90 bp | GTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGCATAGCAGCTGTATGTaGTCTGTGCAAAAGCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: VVPPSMGTFPEKSKVEPWHSSCM*SVQKLS Trigger: GGAAAGCTTTTGCACAGACCACATACAGCTGCTATG...CCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR CAA 90 bp | AAAGCTTTCCTGCCTGTTTTCCTCATTAATGATTCAGTGGTTAGATaGTTAGACCCAACTCTCAGAAGGGTAGGGAGCCACGGTCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: KAFLPVFLINDSVVR*LDPTLRRVGSHGQV Trigger: GACTTGACCGTGGCTCCCTACCCTTCTGAGAGTTGGGTCTAACAATCTAACCACTGAATCATTAATGAGGAAAACAGGCAGGAAAGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR CAA 90 bp | GAAAAGAGGTCTCTGAGTCTCTTTTTATACCGGGATAGGCAGCGATaGCTCCTCCACCGTAATCTTCATGTTACTCATAAACAAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: EKRSLSLFLYRDRQR*LLHRNLHVTHKQEE Trigger: CTCCTCTTGTTTATGAGTAACATGAAGATTACGGTGGAGGAGCAATCGCTGCCTATCCCGGTATAAAAAGAGACTCAGAGACCTCTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR-3UTR GCA 90 bp | GTTCATAACACCAAGTTTCATAACGATAGGCCATGCGAATCTGAGCGACATTTGGCTGTATGTGGTCTGTaGAAAAGCTTTCCTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VHNTKFHNDRPCESERHLAVCGL*KSFPAC Trigger: ACAGGCAGGAAAGCTTTTGCACAGACCACATACAGC...CAAATGTCGCTCAGATTCGCATGGCCTATCGTTATGAAACTTGGTGTTATGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR-3UTR TCA 90 bp | AAAGCTTTCCTGCCTGTTTTCCTCATTAATGATTCAGTGGTTAGATTGTTAGACGAGAAAGAAGCGCCCTaGTTTGACTTTCCATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: KAFLPVFLINDSVVRLLDEKEAP*FDFPFL Trigger: CAGAAATGGAAAGTCAAATCAGGGCGCTTCTTTCTC...GTCTAACAATCTAACCACTGAATCATTAATGAGGAAAACAGGCAGGAAAGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR-3UTR CAA 90 bp | CGGTCAAGTCTACCTCATGAGAAATCCCACACTGCAGGACACTGTTCCTTGCCAGCTCAGCTTGAAGACTaGCGCAGCGATGGCGTATTC | + |
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Preference number: 3 (lower is better) Translates to: RSSLPHEKSHTAGHCSLPAQLED*RSDGVF Trigger: GAATACGCCATCGCTGCGCAAGTCTTCAAGCTGAGC...TGGCAAGGAACAGTGTCCTGCAGTGTGGGATTTCTCATGAGGTAGACTTGACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR CCA 72 bp | ATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATaGCAGAGAATAGGGCTTGACGGAGGAGCTGTAGGG | + |
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Preference number: 3 (lower is better) Translates to: MGTFPEKSKVEP*QRIGLDGGAVG Trigger: CCCTACAGCTCCTCCGTCAAGCCCTATTCTCTGCCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR-3UTR CAA 90 bp | GCGCAGCGATGGCGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGAAGAAGCGCCCTGATTaGACTTTCCATTTCTGCGTG | + |
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Preference number: 3 (lower is better) Translates to: AQRWRILPSGAPVVIYVRKKRPD*TFHFCV Trigger: CACGCAGAAATGGAAAGTCAAATCAGGGCGCTTCTT...CCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACGCCATCGCTGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR TCA 72 bp | GTACACATCCTACAGAAAGCGGAGAAAGAAGCGCCCTaGTTTGACTTTCCATTTCTGCGTGGTGAGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: VHILQKAEKEAP*FDFPFLRGEGE Trigger: CTCTCCCTCACCACGCAGAAATGGAAAGTCAAATCAGGGCGCTTCTTTCTCCGCTTTCTGTAGGATGTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR TCA 72 bp | CATTTCTGTAGTGCCTCCCTCCATGGGCACATTTCCTaGGAAATCAAAGGTGGAGCCATGGCAGAGAATAGG | + |
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Preference number: 3 (lower is better) Translates to: HFCSASLHGHIS*EIKGGAMAENR Trigger: CCTATTCTCTGCCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTACAGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR CCA 72 bp | GACAGTCTTCTAGTCCCTAGCCATAGCAGCTGTATGTaGTCTGTGCAAAAGCTTTCCTGCCTGTTTTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: DSLLVPSHSSCM*SVQKLSCLFSS Trigger: TGAGGAAAACAGGCAGGAAAGCTTTTGCACAGACCACATACAGCTGCTATGGCTAGGGACTAGAAGACTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR GCA 72 bp | CATAGCAGCTGTATGTGGTCTGTGCAAAAGCTTTCCTaGCTGTTTTCCTCATTAATGATTCAGTGGTTAGAT | + |
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Preference number: 3 (lower is better) Translates to: HSSCMWSVQKLS*LFSSLMIQWLD Trigger: ATCTAACCACTGAATCATTAATGAGGAAAACAGGCAGGAAAGCTTTTGCACAGACCACATACAGCTGCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR TCA 90 bp | ATCCCACACTGCAGGACACTGTTCCTTGCCACCTCACACATGTCACACGTGCTCGCAGCTGCATGGATGTaGGTATCCACCTTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: IPHCRTLFLATSHMSHVLAAAWM*VSTFLQ Trigger: CTGCAGGAAGGTGGATACTCACATCCATGCAGCTGC...GAGCACGTGTGACATGTGTGAGGTGGCAAGGAACAGTGTCCTGCAGTGTGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | GTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGTGGGCTCATCTCTGTTaGCTGCCGCTTCATCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: VVPPSMGTFPEKSKVEPWWAHLC*LPLHQG Trigger: ACCCTGATGAAGCGGCAGCCAACAGAGATGAGCCCA...CCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | GTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGCTGCATGCTGATACTTaGCCTCCACCAGGTCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: VVPPSMGTFPEKSKVEPWLHADT*PPPGLH Trigger: GTGCAGACCTGGTGGAGGCCAAGTATCAGCATGCAG...CCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | ATCCCACACTGCAGGACACTGTTCCTTGCCACCTCACACATGTCACACGTGCTCGAAGACACTGAGGTCTaGGTGAGCTTGGGGGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: IPHCRTLFLATSHMSHVLEDTEV*VSLGVD Trigger: ATCAACCCCCAAGCTCACCCAGACCTCAGTGTCTTC...GAGCACGTGTGACATGTGTGAGGTGGCAAGGAACAGTGTCCTGCAGTGTGGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR TCA 90 bp | GTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGGCTCATCCATCTCGTTaGGCATCTGATGGACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VVPPSMGTFPEKSKVEPWAHPSR*ASDGPG Trigger: TCCAGGTCCATCAGATGCTCAACGAGATGGATGAGC...CCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR TCA 90 bp | ACTCAAATTAGTTCCTCGAAGGCTTGCGCTACCACTAAGCTGTATTCCCAGCCCACACTGAGGTCTGGGTaGGCTTGGGGGTTGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: TQISSSKACATTKLYSQPTLRSG*AWGLMV Trigger: CACCATCAACCCCCAAGCTCACCCAGACCTCAGTGT...GGGCTGGGAATACAGCTTAGTGGTAGCGCAAGCCTTCGAGGAACTAATTTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | CACGGTCAAGTCTACCTCATGAGAAATCCCACACTGCAGGACACTGTTCCTTGCGTGATAGCCCAGGTTTaGAGGAAGGTCCTCTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: HGQVYLMRNPTLQDTVPCVIAQV*RKVLCA Trigger: CGCACAGAGGACCTTCCTGCAAACCTGGGCTATCAC...GCAAGGAACAGTGTCCTGCAGTGTGGGATTTCTCATGAGGTAGACTTGACCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | ATCCCACACTGCAGGACACTGTTCCTTGCCACCTCACACATGTCACACGTGCTCACACATCATAGATCCTaGGGACCTGGATCATCCACG | + |
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Preference number: 4 (lower is better) Translates to: IPHCRTLFLATSHMSHVLTHHRS*GPGSST Trigger: CGTGGATGATCCAGGTCCCCAGGATCTATGATGTGT...GAGCACGTGTGACATGTGTGAGGTGGCAAGGAACAGTGTCCTGCAGTGTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | GTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGGCGGTGACATGGCGATaGGAATCTGGGCTAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: VVPPSMGTFPEKSKVEPWAVTWR*ESGLGK Trigger: TTTTCCTAGCCCAGATTCCCATCGCCATGTCACCGC...CCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | TGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGCAGATACTCAGCGGTGACATaGCGATGGGAATCTGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: CLPPWAHFLRNQRWSHGRYSAVT*RWESGL Trigger: TAGCCCAGATTCCCATCGCCATGTCACCGCTGAGTA...TCTGCCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR TCA 90 bp | GTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGCACCAGCTTTCATCTTaGGGTGATAGCCCAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: VVPPSMGTFPEKSKVEPWHQLSS*GDSPGL Trigger: CAAACCTGGGCTATCACCTCAAGATGAAAGCTGGTG...CCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | GGAGGAGCTGTAGGGACTCAAATTAGTTCCTCGAAGGCTTGCGCTACCACTAAGTTGGTGAAGTGGAACTaGATCGGGTCATCGGTCGAC | + |
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Preference number: 4 (lower is better) Translates to: GGAVGTQISSSKACATTKLVKWN*IGSSVD Trigger: GTCGACCGATGACCCGATGCAGTTCCACTTCACCAA...CTTAGTGGTAGCGCAAGCCTTCGAGGAACTAATTTGAGTCCCTACAGCTCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | GCGCAGCGATGGCGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGGATGGACCTGGAACTTaGAGGAGAGGAACTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: AQRWRILPSGAPVVIYVRDGPGT*RRGTSG Trigger: GCCTGAAGTTCCTCTCCTCCAAGTTCCAGGTCCATC...CCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACGCCATCGCTGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR TCA 90 bp | ATGGCGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGGAGGAAGTGGTGAGCTTGGGGGTTaGTGGTGGCCTCAAACACTG | + |
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Preference number: 4 (lower is better) Translates to: MAYSSIRGSCSYLRKGGSGELGG*WWPQTL Trigger: CAGTGTTTGAGGCCACCATCAACCCCCAAGCTCACC...ACTTCCTCCCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | ATAACGATAGGCCATGCGAATCTGAGCGACATTTGTCCTCCGGATGTCATTTCCCAGGAAGGTCCTCTGTaGGAAAGGGGTCTTCACCCT | + |
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Preference number: 4 (lower is better) Translates to: ITIGHANLSDICPPDVISQEGPL*ERGLHP Trigger: AGGGTGAAGACCCCTTTCGCACAGAGGACCTTCCTG...GGAAATGACATCCGGAGGACAAATGTCGCTCAGATTCGCATGGCCTATCGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | CTTGCGCAGCGATGGCGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAACTTGGAGGGGGTCTTaGGGAACCTCTGGAATGACT | + |
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Preference number: 4 (lower is better) Translates to: LAQRWRILPSGAPVVIYVTWRGS*GTSGMT Trigger: AGTCATTCCAGAGGTTCCCCAAGACCCCCTCCAAGT...TACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACGCCATCGCTGCGCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | ACTCAAATTAGTTCCTCGAAGGCTTGCGCTACCACTAAGCTGTATTCCCAGCCCTGTTCCTCAAGTACTTaGAGGGGGTCTTGGGGAACC | + |
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Preference number: 4 (lower is better) Translates to: TQISSSKACATTKLYSQPCSSST*RGSWGT Trigger: GGTTCCCCAAGACCCCCTCCAAGTACTTGAGGAACA...GGGCTGGGAATACAGCTTAGTGGTAGCGCAAGCCTTCGAGGAACTAATTTGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | ATAACGATAGGCCATGCGAATCTGAGCGACATTTGTCCTCCGGATGTCATTTCCCGCACCTTGGTGAAGTaGAACTGCATCGGGTCATCG | + |
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Preference number: 4 (lower is better) Translates to: ITIGHANLSDICPPDVISRTLVK*NCIGSS Trigger: CGATGACCCGATGCAGTTCCACTTCACCAAGGTGCG...GGAAATGACATCCGGAGGACAAATGTCGCTCAGATTCGCATGGCCTATCGTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | ATCCCACACTGCAGGACACTGTTCCTTGCCACCTCACACATGTCACACGTGCTCCTCTCGTATACACAATaGCCGATAGAGACCTTTACA | + |
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Preference number: 4 (lower is better) Translates to: IPHCRTLFLATSHMSHVLLSYTQ*PIETFT Trigger: TGTAAAGGTCTCTATCGGGCATTGTGTATACGAGAG...GAGCACGTGTGACATGTGTGAGGTGGCAAGGAACAGTGTCCTGCAGTGTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | CTTGCGCAGCGATGGCGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAGTTCATGCAGGCAGCTaGATGGATGTGAGTATCCAC | + |
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Preference number: 4 (lower is better) Translates to: LAQRWRILPSGAPVVIYVVHAGS*MDVSIH Trigger: GTGGATACTCACATCCATGCAGCTGCCTGCATGAAC...TACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACGCCATCGCTGCGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | CCAGGGGTCATTTCTGTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCATCAAAGCCAGTGATGTaGTTGAGGAAGACACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PGVISVVPPSMGTFPEKSSKPVM*LRKTLR Trigger: CCTCAGTGTCTTCCTCAAGCACATCACTGGCTTTGA...TGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTACAGAAATGACCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | CCAGGGGTCATTTCTGTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCATCATCCACGTCATGTTaGGGCAATAGATGCGATTGC | + |
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Preference number: 4 (lower is better) Translates to: PGVISVVPPSMGTFPEKSSSTSC*GNRCDC Trigger: GCAATCGCATCTATTGCCCCAACATGACGTGGATGA...TGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTACAGAAATGACCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR TCA 90 bp | ATAACGATAGGCCATGCGAATCTGAGCGACATTTGTCCTCCGGATGTCATTTCCATCTCGTTGAGCATCTaGTGGACCTGGAACTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: ITIGHANLSDICPPDVISISLSI*WTWNLE Trigger: CTCCAAGTTCCAGGTCCATCAGATGCTCAACGAGAT...GGAAATGACATCCGGAGGACAAATGTCGCTCAGATTCGCATGGCCTATCGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR TCA 90 bp | CGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGGAGGAAGTGCATGTTGTTACTCAGCGGTaGCATGGCGATGGGAATCTG | + |
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Preference number: 4 (lower is better) Translates to: RILPSGAPVVIYVREEVHVVTQR*HGDGNL Trigger: CAGATTCCCATCGCCATGTCACCGCTGAGTAACAAC...ATGCACTTCCTCCCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | CTTGCGCAGCGATGGCGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAACGCCTTTTTCTCCTaGCATCCATGGACAGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LAQRWRILPSGAPVVIYVNAFFS*HPWTGS Trigger: AGAACCTGTCCATGGATGGCAGGAGAAAAAGGCGTT...TACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACGCCATCGCTGCGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | GCGCAGCGATGGCGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGGGCAATAGATGCGATTaGAGACAAACCAAGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: AQRWRILPSGAPVVIYVRGNRCD*RQTKRR Trigger: TCTCCTCTTGGTTTGTCTGCAATCGCATCTATTGCC...CCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACGCCATCGCTGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | GCGCAGCGATGGCGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGGTCTTGGGGAACCTCTaGAATGACTTCTGCATGTAT | + |
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Preference number: 4 (lower is better) Translates to: AQRWRILPSGAPVVIYVRVLGNL*NDFCMY Trigger: ATACATGCAGAAGTCATTCCAGAGGTTCCCCAAGAC...CCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACGCCATCGCTGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | GCGCAGCGATGGCGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGAACTTATCAAAACGTTaGAACGTCTGGCGTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AQRWRILPSGAPVVIYVRNLSKR*NVWRPA Trigger: TGCTGGACGCCAGACGTTCCAACGTTTTGATAAGTT...CCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACGCCATCGCTGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | CCAGGGGTCATTTCTGTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAGGTGGCCTCAAACACTaGAAGGAAAATATTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: PGVISVVPPSMGTFPEKSGGLKH*KENILQ Trigger: CTGGAGAATATTTTCCTTCCAGTGTTTGAGGCCACC...TGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTACAGAAATGACCCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | CCAGGGGTCATTTCTGTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAATGGCGATGGGAATCTaGGCTAGGAAAAACAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: PGVISVVPPSMGTFPEKSMAMGI*ARKNKY Trigger: GTACTTGTTTTTCCTAGCCCAGATTCCCATCGCCAT...TGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTACAGAAATGACCCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR TCA 90 bp | TGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGCAGACTCGTAGGTTGGGGATaGAGAAATAAATTCTTCGAT | + |
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Preference number: 4 (lower is better) Translates to: CLPPWAHFLRNQRWSHGRLVGWG*RNKFFD Trigger: ATCGAAGAATTTATTTCTTCATCCCCAACCTACGAG...TCTGCCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
||
| CDS-3UTR CCA 90 bp | ATTAGTTCCTCGAAGGCTTGCGCTACCACTAAGCTGTATTCCCAGCCCAGGACATGTGACCACTGTGTTTaGATTCATCATCCACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISSSKACATTKLYSQPRTCDHCV*IHHPHC Trigger: ACAGTGTGGATGATGAATCCAAACACAGTGGTCACA...TGTCCTGGGCTGGGAATACAGCTTAGTGGTAGCGCAAGCCTTCGAGGAACTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | CGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGGAGGAAGTGCATTCCACTCCTCGGGTTTaGGACTCTTGGAGGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RILPSGAPVVIYVREEVHSTPRV*DSWRKT Trigger: TGTTTTCCTCCAAGAGTCCCAAACCCGAGGAGTGGA...ATGCACTTCCTCCCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | GTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGCTCTGGAATGACTTCTaGATGTATTTCTCTCGTATA | + |
|
Preference number: 4 (lower is better) Translates to: VVPPSMGTFPEKSKVEPWLWNDF*MYFSRI Trigger: TATACGAGAGAAATACATGCAGAAGTCATTCCAGAG...CCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | ATTAGTTCCTCGAAGGCTTGCGCTACCACTAAGCTGTATTCCCAGCCCAGGACAAGCAAAGCTACGCATTaGATCATCAATTTGTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISSSKACATTKLYSQPRTSKATH*IINLFS Trigger: GGAAAACAAATTGATGATGCAATGCGTAGCTTTGCT...TGTCCTGGGCTGGGAATACAGCTTAGTGGTAGCGCAAGCCTTCGAGGAACTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | ATGGCGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGGAGGAAGTTGTTGGGGCAATAGATaGGATTGCAGACAAACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MAYSSIRGSCSYLRKGGSCWGNR*DCRQTK Trigger: CTTGGTTTGTCTGCAATCGCATCTATTGCCCCAACA...ACTTCCTCCCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | GTTCATAACACCAAGTTTCATAACGATAGGCCATGCGAATCTGAGCGACATTTGGAAGTCATCCAGATTTaGGTAAGGGTAGGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VHNTKFHNDRPCESERHLEVIQI*VRVGLG Trigger: CCCAAGCCCTACCCTTACCCAAATCTGGATGACTTC...CAAATGTCGCTCAGATTCGCATGGCCTATCGTTATGAAACTTGGTGTTATGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | CATAGCAGCTGTATGTGGTCTGTGCAAAAGCTTTCCTGCCTGTTTTCCTCATTATTTGTTCCACTCATCTaGACTGCGACCGTAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSCMWSVQKLSCLFSSLFVPLI*TATVDG Trigger: TCCATCTACGGTCGCAGTCCAGATGAGTGGAACAAA...TAATGAGGAAAACAGGCAGGAAAGCTTTTGCACAGACCACATACAGCTGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | ATAACGATAGGCCATGCGAATCTGAGCGACATTTGTCCTCCGGATGTCATTTCCGTGGCAGGAAATTCTTaGATCGGAACACATCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITIGHANLSDICPPDVISVAGNS*IGTHHR Trigger: TCTATGATGTGTTCCGATCCAAGAATTTCCTGCCAC...GGAAATGACATCCGGAGGACAAATGTCGCTCAGATTCGCATGGCCTATCGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR CAA 72 bp | CTGCCTGTTTTCCTCATTAATGATTCAGTGGTTAGATaGTTAGACCCAACTCTCAGAAGGGTAGGGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPVFLINDSVVR*LDPTLRRVGSH Trigger: GTGGCTCCCTACCCTTCTGAGAGTTGGGTCTAACAATCTAACCACTGAATCATTAATGAGGAAAACAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
||
| CDS-3UTR CCA 90 bp | CCAGGGGTCATTTCTGTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAATAAATTCTTCGATGTaGGACAGTTTGGTAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGVISVVPPSMGTFPEKSINSSM*DSLVED Trigger: ATCTTCTACCAAACTGTCCCACATCGAAGAATTTAT...TGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTACAGAAATGACCCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | ATAACGATAGGCCATGCGAATCTGAGCGACATTTGTCCTCCGGATGTCATTTCCATCATCAGGCCTTTCTaGAGGAAATCTAAGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITIGHANLSDICPPDVISIIRPF*RKSKKG Trigger: TCCTTTCTTAGATTTCCTCCAGAAAGGCCTGATGAT...GGAAATGACATCCGGAGGACAAATGTCGCTCAGATTCGCATGGCCTATCGTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
||
| CDS-3UTR CCA 90 bp | TTCATAACACCAAGTTTCATAACGATAGGCCATGCGAATCTGAGCGACATTTGTACAGTCTTCCGTCCTTaGAAACGCCTTTTTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FITPSFITIGHANLSDICTVFRP*KRLFLL Trigger: CAGGAGAAAAAGGCGTTTCCAAGGACGGAAGACTGT...ACAAATGTCGCTCAGATTCGCATGGCCTATCGTTATGAAACTTGGTGTTATGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CCA 90 bp | GTTCATAACACCAAGTTTCATAACGATAGGCCATGCGAATCTGAGCGACATTTGCATCTTTCCGAAGTGTaGCAGGAAATTCTTGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: VHNTKFHNDRPCESERHLHLSEV*QEILGS Trigger: CGATCCAAGAATTTCCTGCCACACTTCGGAAAGATG...CAAATGTCGCTCAGATTCGCATGGCCTATCGTTATGAAACTTGGTGTTATGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| 3UTR CAA 72 bp | TCTCTGAGTCTCTTTTTATACCGGGATAGGCAGCGATaGCTCCTCCACCGTAATCTTCATGTTACTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLFLYRDRQR*LLHRNLHVTHK Trigger: TTTATGAGTAACATGAAGATTACGGTGGAGGAGCAATCGCTGCCTATCCCGGTATAAAAAGAGACTCAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR TCA 90 bp | GAGTTCATAACACCAAGTTTCATAACGATAGGCCATGCGAATCTGAGCGACATTTTGGAGGAAAACATGTaGCCACTGTGTTTGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: EFITPSFITIGHANLSDILEENM*PLCLDS Trigger: TGAATCCAAACACAGTGGTCACATGTTTTCCTCCAA...AATGTCGCTCAGATTCGCATGGCCTATCGTTATGAAACTTGGTGTTATGAACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR GCA 90 bp | TTCATAACACCAAGTTTCATAACGATAGGCCATGCGAATCTGAGCGACATTTGTATGAGAAATATTGTCTaGTATCATGAAGGCTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FITPSFITIGHANLSDICMRNIV*YHEGCH Trigger: ATGACAGCCTTCATGATAGCAGACAATATTTCTCAT...ACAAATGTCGCTCAGATTCGCATGGCCTATCGTTATGAAACTTGGTGTTATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS TCA 90 bp | CCACCTCAAAGTCTTCAACGGTTACCCCCGAGGCATAGTCTCCAGTaGTCTGCACCCTCTGGAAGTCAGGCACACTCTCGTAGGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPQSLQRLPPRHSLQ*SAPSGSQAHSRRLG Trigger: CCCCAACCTACGAGAGTGTGCCTGACTTCCAGAGGGTGCAGATCACTGGAGACTATGCCTCGGGGGTAACCGTTGAAGACTTTGAGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS-3UTR CAA 90 bp | CGGTCAAGTCTACCTCATGAGAAATCCCACACTGCAGGACACTGTTCCTTGCCATACGTGCGGCGCACCTaGGTGAAGTGGAACTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: RSSLPHEKSHTAGHCSLPYVRRT*VKWNCI Trigger: GATGCAGTTCCACTTCACCAAGGTGCGCCGCACGTA...TGGCAAGGAACAGTGTCCTGCAGTGTGGGATTTCTCATGAGGTAGACTTGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS TCA 90 bp | TCCTCGGGTTTGGGACTGTGCTTGAGGAAGACACTGAGGTCTGGGTaGGCTTGGGGGTTGATGGTGGCCTCAAACACTGGAAGGAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: SSGLGLCLRKTLRSG*AWGLMVASNTGRKI Trigger: TATTTTCCTTCCAGTGTTTGAGGCCACCATCAACCCCCAAGCTCACCCAGACCTCAGTGTCTTCCTCAAGCACAGTCCCAAACCCGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177250.2 |
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| CDS CCA 90 bp | ACCAAGAGGAGAGTTTGTTCCACTCATCTGGACTGCGACCGTAGATaGATAAGCGAGGCTCTGCATGCTGATACTTGGCCTCCACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TKRRVCSTHLDCDRR*ISEALHADTWPPPG Trigger: ACCTGGTGGAGGCCAAGTATCAGCATGCAGAGCCTCGCTTATCCATCTACGGTCGCAGTCCAGATGAGTGGAACAAACTCTCCTCTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | TGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGCAGAGAACTTATCAAAACGTaGGAACGTCTGGCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLPPWAHFLRNQRWSHGRELIKT*ERLASS Trigger: GCTGGACGCCAGACGTTCCAACGTTTTGATAAGTTC...TCTGCCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | CACGGTCAAGTCTACCTCATGAGAAATCCCACACTGCAGGACACTGTTCCTTGCACGGGTTGTTTTCCATaGTCCACTCCTCGGGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: HGQVYLMRNPTLQDTVPCTGCFP*STPRVW Trigger: CCAAACCCGAGGAGTGGACAATGGAAAACAACCCGT...GCAAGGAACAGTGTCCTGCAGTGTGGGATTTCTCATGAGGTAGACTTGACCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | GTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGTCGAGGAACAGACTGTaGTTACTCAGCGGTGACATG | + |
|
Preference number: 5 (lower is better) Translates to: VVPPSMGTFPEKSKVEPWSRNRL*LLSGDM Trigger: CATGTCACCGCTGAGTAACAACAGTCTGTTCCTCGA...CCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS TCA 90 bp | CTGCCGCTTCATCAGGGTAGATGTAAATCACACCAGCTTTCATCTTaGGGTGATAGCCCAGGTTTGCAGGAAGGTCCTCTGTGCGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPLHQGRCKSHQLSS*GDSPGLQEGPLCER Trigger: CCTTTCGCACAGAGGACCTTCCTGCAAACCTGGGCTATCACCTCAAGATGAAAGCTGGTGTGATTTACATCTACCCTGATGAAGCGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS GCA 90 bp | AGGGAAATTGGGCAGATCTCATCCACGTCGAAGGGGGAGATCTCGTaGCGACCTCCCTCATCTTTGACTTCAGAGGCAAACACTTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: REIGQISSTSKGEIS*RPPSSLTSEANTFS Trigger: TGAAAAAGTGTTTGCCTCTGAAGTCAAAGATGAGGGAGGTCGGCACGAGATCTCCCCCTTCGACGTGGATGAGATCTGCCCAATTTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS GCA 90 bp | GATGTAAATCACACCAGCTTTCATCTTGAGGTGATAGCCCAGGTTTaGAGGAAGGTCCTCTGTGCGAAAGGGGTCTTCACCCTTCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: DVNHTSFHLEVIAQV*RKVLCAKGVFTLLR Trigger: CCGAAGAAGGGTGAAGACCCCTTTCGCACAGAGGACCTTCCTGCAAACCTGGGCTATCACCTCAAGATGAAAGCTGGTGTGATTTACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CCA 90 bp | TGTGCGAAAGGGGTCTTCACCCTTCTTCGGAGGAGGGGTAAATACTaGGTAGAAGCTCTCGTTTCCTACCAAGGCTTCGCCATCAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: CAKGVFTLLRRRGKY*VEALVSYQGFAINV Trigger: AACATTGATGGCGAAGCCTTGGTAGGAAACGAGAGCTTCTACCCAGTATTTACCCCTCCTCCGAAGAAGGGTGAAGACCCCTTTCGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | CGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGGAGGAAGTGCATGGTGATAGCCCAGGTTaGCAGGAAGGTCCTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RILPSGAPVVIYVREEVHGDSPG*QEGPLC Trigger: GCACAGAGGACCTTCCTGCAAACCTGGGCTATCACC...ATGCACTTCCTCCCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | TGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGCAGATCTGCACCCACCTCCTaGATGATAGTGGCAAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: CLPPWAHFLRNQRWSHGRSAPTS*MIVAKY Trigger: GTATTTTGCCACTATCATCAAGGAGGTGGGTGCAGA...TCTGCCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS GCA 90 bp | AGATCCTGGGGACCTGGATCATCCACGTCATGTTGGGGCAATAGATaGGATTGCAGACAAACCAAGAGGAGAGTTTGTTCCACTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSWGPGSSTSCWGNR*DCRQTKRRVCSTHL Trigger: CAGATGAGTGGAACAAACTCTCCTCTTGGTTTGTCTGCAATCGCATCTATTGCCCCAACATGACGTGGATGATCCAGGTCCCCAGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CCA 90 bp | AGTCATCCAGATTTGGGTAAGGGTAGGGCTTGGGCTCATCTCTGTTaGCTGCCGCTTCATCAGGGTAGATGTAAATCACACCAGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SHPDLGKGRAWAHLC*LPLHQGRCKSHQLS Trigger: TGAAAGCTGGTGTGATTTACATCTACCCTGATGAAGCGGCAGCCAACAGAGATGAGCCCAAGCCCTACCCTTACCCAAATCTGGATGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CCA 90 bp | TCATGTCATCCAGGAAGTCATCCAGATTTGGGTAAGGGTAGGGCTTaGGCTCATCTCTGTTGGCTGCCGCTTCATCAGGGTAGATGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: SCHPGSHPDLGKGRA*AHLCWLPLHQGRCK Trigger: TTTACATCTACCCTGATGAAGCGGCAGCCAACAGAGATGAGCCCAAGCCCTACCCTTACCCAAATCTGGATGACTTCCTGGATGACATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | ACTCAAATTAGTTCCTCGAAGGCTTGCGCTACCACTAAGCTGTATTCCCAGCCCCGACCTCCCTCATCTTaGACTTCAGAGGCAAACACT | + |
|
Preference number: 5 (lower is better) Translates to: TQISSSKACATTKLYSQPRPPSS*TSEANT Trigger: AGTGTTTGCCTCTGAAGTCAAAGATGAGGGAGGTCG...GGGCTGGGAATACAGCTTAGTGGTAGCGCAAGCCTTCGAGGAACTAATTTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | TTCATAACACCAAGTTTCATAACGATAGGCCATGCGAATCTGAGCGACATTTGTGAGGTCTGGGTGAGCTaGGGGGTTGATGGTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FITPSFITIGHANLSDICEVWVS*GVDGGL Trigger: GAGGCCACCATCAACCCCCAAGCTCACCCAGACCTC...ACAAATGTCGCTCAGATTCGCATGGCCTATCGTTATGAAACTTGGTGTTATGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | ATGGCGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGGAGGAAGTGTCCACTCCTCGGGTTaGGGACTCTTGGAGGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: MAYSSIRGSCSYLRKGGSVHSSG*GLLEEN Trigger: GTTTTCCTCCAAGAGTCCCAAACCCGAGGAGTGGAC...ACTTCCTCCCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS GCA 90 bp | ATCCAGATTTGGGTAAGGGTAGGGCTTGGGCTCATCTCTGTTGGCTaGCGCTTCATCAGGGTAGATGTAAATCACACCAGCTTTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: IQIWVRVGLGLISVG*RFIRVDVNHTSFHL Trigger: AAGATGAAAGCTGGTGTGATTTACATCTACCCTGATGAAGCGGCAGCCAACAGAGATGAGCCCAAGCCCTACCCTTACCCAAATCTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CCA 90 bp | CCAAGGCTTCGCCATCAATGTTCCTCAAGTACTTGGAGGGGGTCTTaGGGAACCTCTGGAATGACTTCTGCATGTATTTCTCTCGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: PRLRHQCSSSTWRGS*GTSGMTSACISLVY Trigger: GTATACGAGAGAAATACATGCAGAAGTCATTCCAGAGGTTCCCCAAGACCCCCTCCAAGTACTTGAGGAACATTGATGGCGAAGCCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS CCA 90 bp | TCTCGTTTCCTACCAAGGCTTCGCCATCAATGTTCCTCAAGTACTTaGAGGGGGTCTTGGGGAACCTCTGGAATGACTTCTGCATGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SRFLPRLRHQCSSST*RGSWGTSGMTSACI Trigger: AATACATGCAGAAGTCATTCCAGAGGTTCCCCAAGACCCCCTCCAAGTACTTGAGGAACATTGATGGCGAAGCCTTGGTAGGAAACGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS CCA 90 bp | GGAACACATCATAGATCCTGGGGACCTGGATCATCCACGTCATGTTaGGGCAATAGATGCGATTGCAGACAAACCAAGAGGAGAGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GTHHRSWGPGSSTSC*GNRCDCRQTKRRVC Trigger: ACAAACTCTCCTCTTGGTTTGTCTGCAATCGCATCTATTGCCCCAACATGACGTGGATGATCCAGGTCCCCAGGATCTATGATGTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
||
| CDS-3UTR CAA 90 bp | CGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGGAGGAAGTGCATATGTTCCTCAAGTACTaGGAGGGGGTCTTGGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RILPSGAPVVIYVREEVHMFLKY*EGVLGN Trigger: GTTCCCCAAGACCCCCTCCAAGTACTTGAGGAACAT...ATGCACTTCCTCCCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
||
| CDS-3UTR CAA 90 bp | GTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCAAAGGTGGAGCCATGGCTTGCACCCACGGGATaGTATTTGTCATTGAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: VVPPSMGTFPEKSKVEPWLAPTG*YLSLNL Trigger: TAAGTTCAATGACAAATACAATCCCGTGGGTGCAAG...CCATGGCTCCACCTTTGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
||
| CDS TCA 90 bp | AGAGGTCCCGAAGCTCACTTGCACCCACGGGATTGTATTTGTCATTaGACTTATCAAAACGTTGGAACGTCTGGCGTCCAGCATGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: RGPEAHLHPRDCICH*TYQNVGTSGVQHEH Trigger: ATGTTCATGCTGGACGCCAGACGTTCCAACGTTTTGATAAGTTCAATGACAAATACAATCCCGTGGGTGCAAGTGAGCTTCGGGACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
||
| CDS CCA 90 bp | CCATCAATGTTCCTCAAGTACTTGGAGGGGGTCTTGGGGAACCTCTaGAATGACTTCTGCATGTATTTCTCTCGTATACACAATGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PSMFLKYLEGVLGNL*NDFCMYFSRIHNAR Trigger: TCGGGCATTGTGTATACGAGAGAAATACATGCAGAAGTCATTCCAGAGGTTCCCCAAGACCCCCTCCAAGTACTTGAGGAACATTGATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
||
| CDS-3UTR CAA 90 bp | CGTATTCTTCCATCAGGGGCTCCTGTAGTTATTTACGTAAGGGAGGAAGTGCATTCCTTTCTCAGGCTGTaGAGCACCGTGATGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RILPSGAPVVIYVREEVHSFLRL*STVMFA Trigger: TGCAAACATCACGGTGCTCAACAGCCTGAGAAAGGA...ATGCACTTCCTCCCTTACGTAAATAACTACAGGAGCCCCTGATGGAAGAATACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
||
| CDS-3UTR CAA 90 bp | GAGTTCATAACACCAAGTTTCATAACGATAGGCCATGCGAATCTGAGCGACATTGGAAGTCATCCAGATTaGGGTAAGGGTAGGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EFITPSFITIGHANLSDIGSHPD*GKGRAW Trigger: CCAAGCCCTACCCTTACCCAAATCTGGATGACTTCC...AATGTCGCTCAGATTCGCATGGCCTATCGTTATGAAACTTGGTGTTATGAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | CCAGGGGTCATTTCTGTAGTGCCTCCCTCCATGGGCACATTTCCTGAGAAATCACTAAGAAAGGATTCTTaGCATATTCGAGGAACAGAC | + |
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Preference number: 5 (lower is better) Translates to: PGVISVVPPSMGTFPEKSLRKDS*HIRGTD Trigger: GTCTGTTCCTCGAATATGCAAAGAATCCTTTCTTAG...TGATTTCTCAGGAAATGTGCCCATGGAGGGAGGCACTACAGAAATGACCCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS CCA 90 bp | GATGTTTCACTTTGTGGAATGGACAAATTAACAGTCTTCCGTCCTTaGAAACGCCTTTTTCTCCTGCCATCCATGGACAGGTTCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: DVSLCGMDKLTVFRP*KRLFLLPSMDRFSM Trigger: CATGGAGAACCTGTCCATGGATGGCAGGAGAAAAAGGCGTTTCCAAGGACGGAAGACTGTTAATTTGTCCATTCCACAAAGTGAAACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS-3UTR CAA 90 bp | CACGGTCAAGTCTACCTCATGAGAAATCCCACACTGCAGGACACTGTTCCTTGCCCCACGGGATTGTATTaGTCATTGAACTTATCAAAA | + |
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Preference number: 5 (lower is better) Translates to: HGQVYLMRNPTLQDTVPCPTGLY*SLNLSK Trigger: TTTTGATAAGTTCAATGACAAATACAATCCCGTGGG...GCAAGGAACAGTGTCCTGCAGTGTGGGATTTCTCATGAGGTAGACTTGACCGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | GTTCATAACACCAAGTTTCATAACGATAGGCCATGCGAATCTGAGCGACATTTGAAGCCAGTGATGTGCTaGAGGAAGACACTGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: VHNTKFHNDRPCESERHLKPVMC*RKTLRS Trigger: AGACCTCAGTGTCTTCCTCAAGCACATCACTGGCTT...CAAATGTCGCTCAGATTCGCATGGCCTATCGTTATGAAACTTGGTGTTATGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | ATAACGATAGGCCATGCGAATCTGAGCGACATTTGTCCTCCGGATGTCATTTCCCAGCAAAGCTACGCATaGCATCATCAATTTGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: ITIGHANLSDICPPDVISQQSYA*HHQFVF Trigger: GAAAACAAATTGATGATGCAATGCGTAGCTTTGCTG...GGAAATGACATCCGGAGGACAAATGTCGCTCAGATTCGCATGGCCTATCGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | CATAGCAGCTGTATGTGGTCTGTGCAAAAGCTTTCCTGCCTGTTTTCCTCATTATCGATGTGGGACAGTTaGGTAGAAGATGTTTCACTT | + |
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Preference number: 5 (lower is better) Translates to: HSSCMWSVQKLSCLFSSLSMWDS*VEDVSL Trigger: AAGTGAAACATCTTCTACCAAACTGTCCCACATCGA...TAATGAGGAAAACAGGCAGGAAAGCTTTTGCACAGACCACATACAGCTGCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS-3UTR CAA 90 bp | AAAGCTTTCCTGCCTGTTTTCCTCATTAATGATTCAGTGGTTAGATTGTTAGACAACAGTCTTCCGTCCTaGGAAACGCCTTTTTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: KAFLPVFLINDSVVRLLDNSLPS*ETPFSP Trigger: AGGAGAAAAAGGCGTTTCCAAGGACGGAAGACTGTT...GTCTAACAATCTAACCACTGAATCATTAATGAGGAAAACAGGCAGGAAAGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS CCA 90 bp | AAATTCTTCGATGTGGGACAGTTTGGTAGAAGATGTTTCACTTTGTaGAATGGACAAATTAACAGTCTTCCGTCCTTGGAAACGCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: KFFDVGQFGRRCFTL*NGQINSLPSLETPF Trigger: AAAAGGCGTTTCCAAGGACGGAAGACTGTTAATTTGTCCATTCCACAAAGTGAAACATCTTCTACCAAACTGTCCCACATCGAAGAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS GCA 72 bp | CATGCTCAAGCTTCCGTGCGCGCGTGCGCGCGTGCGTaGGTACGTGCGGCGCACCTTGGTGAAGTGGAACTG | + |
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Preference number: 6 (lower is better) Translates to: HAQASVRACARA*VRAAHLGEVEL Trigger: CAGTTCCACTTCACCAAGGTGCGCCGCACGTACGCACGCACGCGCGCACGCGCGCACGGAAGCTTGAGCATG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155034.6 |
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| CDS GCA 72 bp | GGGCAGATCTCATCCACGTCGAAGGGGGAGATCTCGTaGCGACCTCCCTCATCTTTGACTTCAGAGGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: GQISSTSKGEIS*RPPSSLTSEAN Trigger: GTTTGCCTCTGAAGTCAAAGATGAGGGAGGTCGGCACGAGATCTCCCCCTTCGACGTGGATGAGATCTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS TCA 72 bp | AGTCTTCAACGGTTACCCCCGAGGCATAGTCTCCAGTaGTCTGCACCCTCTGGAAGTCAGGCACACTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: SLQRLPPRHSLQ*SAPSGSQAHSR Trigger: ACGAGAGTGTGCCTGACTTCCAGAGGGTGCAGATCACTGGAGACTATGCCTCGGGGGTAACCGTTGAAGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS TCA 72 bp | TTGGGACTGTGCTTGAGGAAGACACTGAGGTCTGGGTaGGCTTGGGGGTTGATGGTGGCCTCAAACACTGGA | + |
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Preference number: 6 (lower is better) Translates to: LGLCLRKTLRSG*AWGLMVASNTG Trigger: TCCAGTGTTTGAGGCCACCATCAACCCCCAAGCTCACCCAGACCTCAGTGTCTTCCTCAAGCACAGTCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177250.2 |
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| CDS GCA 72 bp | CACACCAGCTTTCATCTTGAGGTGATAGCCCAGGTTTaGAGGAAGGTCCTCTGTGCGAAAGGGGTCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: HTSFHLEVIAQV*RKVLCAKGVFT Trigger: GGTGAAGACCCCTTTCGCACAGAGGACCTTCCTGCAAACCTGGGCTATCACCTCAAGATGAAAGCTGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CAA 72 bp | CCTACCAAGGCTTCGCCATCAATGTTCCTCAAGTACTaGGAGGGGGTCTTGGGGAACCTCTGGAATGACTTC | + |
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Preference number: 6 (lower is better) Translates to: PTKASPSMFLKY*EGVLGNLWNDF Trigger: GAAGTCATTCCAGAGGTTCCCCAAGACCCCCTCCAAGTACTTGAGGAACATTGATGGCGAAGCCTTGGTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS CAA 90 bp | TCATCCACGTCGAAGGGGGAGATCTCGTGCCGACCTCCCTCATCTTaGACTTCAGAGGCAAACACTTTTTCAGCAAAGCTACGCATTGCA | + |
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Preference number: 6 (lower is better) Translates to: SSTSKGEISCRPPSS*TSEANTFSAKLRIA Trigger: TGCAATGCGTAGCTTTGCTGAAAAAGTGTTTGCCTCTGAAGTCAAAGATGAGGGAGGTCGGCACGAGATCTCCCCCTTCGACGTGGATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS TCA 72 bp | GGTTGTTCTTCAGCTCCTTCAGCTCATCCATCTCGTTaGGCATCTGATGGACCTGGAACTTGGAGGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GCSSAPSAHPSR*ASDGPGTWRRG Trigger: TCCTCTCCTCCAAGTTCCAGGTCCATCAGATGCTCAACGAGATGGATGAGCTGAAGGAGCTGAAGAACAACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CCA 72 bp | CTACCAAGGCTTCGCCATCAATGTTCCTCAAGTACTTaGAGGGGGTCTTGGGGAACCTCTGGAATGACTTCT | + |
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Preference number: 6 (lower is better) Translates to: LPRLRHQCSSST*RGSWGTSGMTS Trigger: AGAAGTCATTCCAGAGGTTCCCCAAGACCCCCTCCAAGTACTTGAGGAACATTGATGGCGAAGCCTTGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS CCA 72 bp | CATAGATCCTGGGGACCTGGATCATCCACGTCATGTTaGGGCAATAGATGCGATTGCAGACAAACCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: HRSWGPGSSTSC*GNRCDCRQTKR Trigger: CCTCTTGGTTTGTCTGCAATCGCATCTATTGCCCCAACATGACGTGGATGATCCAGGTCCCCAGGATCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CAA 90 bp | CTCTCGTTTCCTACCAAGGCTTCGCCATCAATGTTCCTCAAGTACTaGGAGGGGGTCTTGGGGAACCTCTGGAATGACTTCTGCATGTAT | + |
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Preference number: 6 (lower is better) Translates to: LSFPTKASPSMFLKY*EGVLGNLWNDFCMY Trigger: ATACATGCAGAAGTCATTCCAGAGGTTCCCCAAGACCCCCTCCAAGTACTTGAGGAACATTGATGGCGAAGCCTTGGTAGGAAACGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS GCA 72 bp | GGACCTGGATCATCCACGTCATGTTGGGGCAATAGATaGGATTGCAGACAAACCAAGAGGAGAGTTTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GPGSSTSCWGNR*DCRQTKRRVCS Trigger: GGAACAAACTCTCCTCTTGGTTTGTCTGCAATCGCATCTATTGCCCCAACATGACGTGGATGATCCAGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS TCA 72 bp | CATCAGGGTAGATGTAAATCACACCAGCTTTCATCTTaGGGTGATAGCCCAGGTTTGCAGGAAGGTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HQGRCKSHQLSS*GDSPGLQEGPL Trigger: CAGAGGACCTTCCTGCAAACCTGGGCTATCACCTCAAGATGAAAGCTGGTGTGATTTACATCTACCCTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CCA 72 bp | CGCCATCAATGTTCCTCAAGTACTTGGAGGGGGTCTTaGGGAACCTCTGGAATGACTTCTGCATGTATTTCT | + |
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Preference number: 6 (lower is better) Translates to: RHQCSSSTWRGS*GTSGMTSACIS Trigger: AGAAATACATGCAGAAGTCATTCCAGAGGTTCCCCAAGACCCCCTCCAAGTACTTGAGGAACATTGATGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS CAA 72 bp | TCGCCATCAATGTTCCTCAAGTACTTGGAGGGGGTCTaGGGGAACCTCTGGAATGACTTCTGCATGTATTTC | + |
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Preference number: 6 (lower is better) Translates to: SPSMFLKYLEGV*GNLWNDFCMYF Trigger: GAAATACATGCAGAAGTCATTCCAGAGGTTCCCCAAGACCCCCTCCAAGTACTTGAGGAACATTGATGGCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS CAA 90 bp | ACCAAGGCTTCGCCATCAATGTTCCTCAAGTACTTGGAGGGGGTCTaGGGGAACCTCTGGAATGACTTCTGCATGTATTTCTCTCGTATA | + |
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Preference number: 6 (lower is better) Translates to: TKASPSMFLKYLEGV*GNLWNDFCMYFSRI Trigger: TATACGAGAGAAATACATGCAGAAGTCATTCCAGAGGTTCCCCAAGACCCCCTCCAAGTACTTGAGGAACATTGATGGCGAAGCCTTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS CCA 72 bp | CTTTGTGGAATGGACAAATTAACAGTCTTCCGTCCTTaGAAACGCCTTTTTCTCCTGCCATCCATGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: LCGMDKLTVFRP*KRLFLLPSMDR Trigger: CCTGTCCATGGATGGCAGGAGAAAAAGGCGTTTCCAAGGACGGAAGACTGTTAATTTGTCCATTCCACAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS CAA 72 bp | CGAAGCTCACTTGCACCCACGGGATTGTATTTGTCATaGAACTTATCAAAACGTTGGAACGTCTGGCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RSSLAPTGLYLS*NLSKRWNVWRP Trigger: TGGACGCCAGACGTTCCAACGTTTTGATAAGTTCAATGACAAATACAATCCCGTGGGTGCAAGTGAGCTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CAA 72 bp | AGGTCCCGAAGCTCACTTGCACCCACGGGATTGTATTaGTCATTGAACTTATCAAAACGTTGGAACGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RSRSSLAPTGLY*SLNLSKRWNVW Trigger: CCAGACGTTCCAACGTTTTGATAAGTTCAATGACAAATACAATCCCGTGGGTGCAAGTGAGCTTCGGGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CCA 72 bp | GGGTCATCGGTCGACAGTGAGATCATCAGGCCTTTCTaGAGGAAATCTAAGAAAGGATTCTTTGCATATTCG | + |
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Preference number: 6 (lower is better) Translates to: GSSVDSEIIRPF*RKSKKGFFAYS Trigger: CGAATATGCAAAGAATCCTTTCTTAGATTTCCTCCAGAAAGGCCTGATGATCTCACTGTCGACCGATGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000177250.2 |
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| CDS CAA 72 bp | ACTTTGTGGAATGGACAAATTAACAGTCTTCCGTCCTaGGAAACGCCTTTTTCTCCTGCCATCCATGGACAG | + |
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Preference number: 6 (lower is better) Translates to: TLWNGQINSLPS*ETPFSPAIHGQ Trigger: CTGTCCATGGATGGCAGGAGAAAAAGGCGTTTCCAAGGACGGAAGACTGTTAATTTGTCCATTCCACAAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS CAA 72 bp | AGTAGGCATAGTAAGTATAAGACGGGTTGTTTTCCATaGTCCACTCCTCGGGTTTGGGACTCTTGGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: SRHSKYKTGCFP*STPRVWDSWRK Trigger: TTTCCTCCAAGAGTCCCAAACCCGAGGAGTGGACAATGGAAAACAACCCGTCTTATACTTACTATGCCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CAA 90 bp | AGATGTTTCACTTTGTGGAATGGACAAATTAACAGTCTTCCGTCCTaGGAAACGCCTTTTTCTCCTGCCATCCATGGACAGGTTCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RCFTLWNGQINSLPS*ETPFSPAIHGQVLH Trigger: ATGGAGAACCTGTCCATGGATGGCAGGAGAAAAAGGCGTTTCCAAGGACGGAAGACTGTTAATTTGTCCATTCCACAAAGTGAAACATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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| CDS CAA 72 bp | CACGGGATTGTATTTGTCATTGAACTTATCAAAACGTaGGAACGTCTGGCGTCCAGCATGAACATCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HGIVFVIELIKT*ERLASSMNIQR Trigger: TCTCTGGATGTTCATGCTGGACGCCAGACGTTCCAACGTTTTGATAAGTTCAATGACAAATACAATCCCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 |
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| CDS CAA 90 bp | AATAAATTCTTCGATGTGGGACAGTTTGGTAGAAGATGTTTCACTTaGTGGAATGGACAAATTAACAGTCTTCCGTCCTTGGAAACGCCT | + |
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Preference number: 6 (lower is better) Translates to: NKFFDVGQFGRRCFT*WNGQINSLPSLETP Trigger: AGGCGTTTCCAAGGACGGAAGACTGTTAATTTGTCCATTCCACAAAGTGAAACATCTTCTACCAAACTGTCCCACATCGAAGAATTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090715.13 ENSMUST00000155034.6 ENSMUST00000176440.2 |
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