Pregenerated sensors for AMN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021278Ensembl transcript IDs: ENSMUST00000021707.8
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | CAAAACAAAACACTGCGCCCGAATGGTAACAGCACTTaGGGCGTGGGTCTGAGGACCAGAGTTCAGATCTCC | + |
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Preference number: 3 (lower is better) Translates to: QNKTLRPNGNST*GVGLRTRVQIS Trigger: GGAGATCTGAACTCTGGTCCTCAGACCCACGCCGCAAGTGCTGTTACCATTCGGGCGCAGTGTTTTGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR CCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGATCCTGGCAGGCGGCCTaGGGACAGCGGCCGCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRSWQAA*GQRPPK Trigger: CTTGGGCGGCCGCTGTCCCCAGGCCGCCTGCCAGGA...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR TCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGACGCCTCCTGCAGCGCTaGGTGCAGCTCCCGAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRRLLQR*VQLPRP Trigger: TGGCCTCGGGAGCTGCACTCAGCGCTGCAGGAGGCG...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR TCA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAAAAGAGCCCGGGCGCCTaGGTCCCGGAGCTCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: NKQLFIGQGKSVLATRREKSPGA*VPELQR Trigger: CCTCTGGAGCTCCGGGACTCAGGCGCCCGGGCTCTT...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR CCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGGCAGTAGGGGGTCCTaGCAGGCGGCCTGGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRGSRGS*QAAWGQ Trigger: CTGTCCCCAGGCCGCCTGCCAGGACCCCCTACTGCC...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR GCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGGACGTCGTCGTAGCTaGAGGGCACGCGCTCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRGRRRS*RARARR Trigger: ACGCCGAGCGCGTGCCCTGCAGCTACGACGACGTCC...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR GCA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAACGGCCGCCCAAGGGCTaGAGCAGAGACGCGCAGATC | + |
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Preference number: 4 (lower is better) Translates to: NKQLFIGQGKSVLATRRERPPKG*SRDAQI Trigger: GATCTGCGCGTCTCTGCTGCAGCCCTTGGGCGGCCG...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR CCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAACGTGCACCGGGTTaGGGCCTGGGCCAAGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRERAPG*GLGQAP Trigger: TGGCGCTTGGCCCAGGCCCCAACCCGGTGCACGTTC...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR GCA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAATCCTGCAGCGCTGAGTaGAGCTCCCGAGGCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: NKQLFIGQGKSVLATRRESCSAE*SSRGQD Trigger: GTCCTGGCCTCGGGAGCTGCACTCAGCGCTGCAGGA...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR GCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGCAGCATCTCGGCGTTaGCACAGACGCAGCCCGACG | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRAASRR*HRRSPT Trigger: CGTCGGGCTGCGTCTGTGGCAACGCCGAGATGCTGC...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR CCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGACGTCGCGCAGCACCTTaGACACAGCCACCTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRRRAAP*TQPPAG Trigger: GCCTGCAGGTGGCTGTGTCCAAGGTGCTGCGCGACG...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| 3UTR CAA 72 bp | ACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTaGCCACCAGGAGAGAAGTCACGGTCTCCGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: TSNSLLGKVSLS*PPGEKSRSPRG Trigger: CCCCCTCGGAGACCGTGACTTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR TCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGACATGCCTTCTCCACCTaGGCCTTCCGCTGCGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRHAFST*AFRCGA Trigger: TGCACCGCAGCGGAAGGCTCAGGTGGAGAAGGCATG...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR GCA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAAGGCGGCCCGAGTCATTaGACAGAGCTGCAGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: NKQLFIGQGKSVLATRREGGPSH*TELQPQ Trigger: CTGTGGCTGCAGCTCTGTGCAATGACTCGGGCCGCC...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR GCA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAACCGGAGCTCCAGAGGTaGGGGTCAAGCCAGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NKQLFIGQGKSVLATRREPELQR*GSSQEK Trigger: CTTCTCCTGGCTTGACCCGCACCTCTGGAGCTCCGG...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR GCA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAATTGGACACAGCCACCTaGAGGCCCTGGTACTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: NKQLFIGQGKSVLATRRELDTAT*RPWYWG Trigger: GCCCCAGTACCAGGGCCTGCAGGTGGCTGTGTCCAA...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR CCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAACCTGGATCTCGGTGTaGGCGTCGCGCAGCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRTWISV*ASRSTL Trigger: CAAGGTGCTGCGCGACGCCCACACCGAGATCCAGGT...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR CCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGATCCACCAGCACCACCTaGATCTCGGTGTGGGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRSTSTT*ISVWAS Trigger: CGACGCCCACACCGAGATCCAGGTGGTGCTGGTGGA...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR TCA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAAGCACCGGACGAGCTCTaGTTCAGCTCTGAGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKQLFIGQGKSVLATRREAPDEL*FSSESA Trigger: GGCAGACTCAGAGCTGAATCAGAGCTCGTCCGGTGC...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR GCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGACCCTGGTACTGGGGCTaGTTCAGGAAGAGGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRPWYWG*FRKRSS Trigger: GCTGGACCTCTTCCTGAAGCAGCCCCAGTACCAGGG...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR GCA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAATCAGGCCTCTGCCTCTaGCTCCCCAGCAAAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NKQLFIGQGKSVLATRRESGLCL*LPSKEW Trigger: CCACTCTTTGCTGGGGAGGCAGAGGCAGAGGCCTGA...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR TCA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAATCACAGCATTGTCCTTaGGGCAGTAGGGGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: NKQLFIGQGKSVLATRRESQHCP*GSRGSW Trigger: CCAGGACCCCCTACTGCCTCAAGGACAATGCTGTGA...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR CCA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAACACGGGGTCCGGTTCTaGTTCCAGTTGGAGGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: NKQLFIGQGKSVLATRREHGVRF*FQLEAV Trigger: TACTGCCTCCAACTGGAACCAGAACCGGACCCCGTG...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR GCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGGCTCAGCGTCTTCATaGCTTCTCCACCTGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRGSASS*LLHLSL Trigger: AAGGCTCAGGTGGAGAAGGCATGAAGACGCTGAGCC...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR CCA 90 bp | ACAAACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGCTCCAGGTCAAATGTaGGGTCGTGGGTCAACGACA | + |
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Preference number: 4 (lower is better) Translates to: TNKQLFIGQGKSVLATRRAPGQM*GRGSTT Trigger: TGTCGTTGACCCACGACCCCACATTTGACCTGGAGC...TCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR TCA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAAGCTCTGATTCAGCTCTaGGTCTGCCGTCATAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: NKQLFIGQGKSVLATRREALIQL*VCRHRL Trigger: AAGCCTATGACGGCAGACTCAGAGCTGAATCAGAGC...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 90 bp | TCCTGGAGGAGCGCGTGGCCCAGCTGCCCCGCCGCGCCGGTCGCGTaGTCGGTCTCCACCAGCACCACCTGGATCTCGGTGTGGGCGTCG | + |
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Preference number: 5 (lower is better) Translates to: SWRSAWPSCPAAPVA*SVSTSTTWISVWAS Trigger: CGACGCCCACACCGAGATCCAGGTGGTGCTGGTGGAGACCGAGCACGCGACCGGCGCGGCGGGGCAGCTGGGCCACGCGCTCCTCCAGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 90 bp | AGGGGGTCCTGGCAGGCGGCCTGGGGACAGCGGCCGCCCAAGGGCTaGAGCAGAGACGCGCAGATCCACGGCAGCATCTCGGCGTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: RGSWQAAWGQRPPKG*SRDAQIHGSISALP Trigger: TGGCAACGCCGAGATGCTGCCGTGGATCTGCGCGTCTCTGCTGCAGCCCTTGGGCGGCCGCTGTCCCCAGGCCGCCTGCCAGGACCCCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 90 bp | GCGTCGGTGCAAGCTTGGGACCCCACTCTCAGCGCGCCCGACCCGTaGAAGCGCAGGCGGCCCTCGCGGGACGCCAGGAAAGCAGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: ASVQAWDPTLSAPDP*KRRRPSRDARKAVR Trigger: CCTGACTGCTTTCCTGGCGTCCCGCGAGGGCCGCCTGCGCTTCCACGGGTCGGGCGCGCTGAGAGTGGGGTCCCAAGCTTGCACCGACGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 90 bp | TGCCCCGCCGCGCCGGTCGCGTGCTCGGTCTCCACCAGCACCACCTaGATCTCGGTGTGGGCGTCGCGCAGCACCTTGGACACAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: CPAAPVACSVSTSTT*ISVWASRSTLDTAT Trigger: GGTGGCTGTGTCCAAGGTGCTGCGCGACGCCCACACCGAGATCCAGGTGGTGCTGGTGGAGACCGAGCACGCGACCGGCGCGGCGGGGCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS TCA 90 bp | CTGCAGGGCACGCGCTCGGCGTCCACGGAGAAGAGCCCGGGCGCCTaGGTCCCGGAGCTCCAGAGGTGCGGGTCAAGCCAGGAGAAGCGA | + |
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Preference number: 5 (lower is better) Translates to: LQGTRSASTEKSPGA*VPELQRCGSSQEKR Trigger: TCGCTTCTCCTGGCTTGACCCGCACCTCTGGAGCTCCGGGACTCAGGCGCCCGGGCTCTTCTCCGTGGACGCCGAGCGCGTGCCCTGCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 90 bp | TCAGGTCCTCGTCGCGCGAGAACGTCTGGCCCACTGCCGAGACGCTaGGAACGTGCACCGGGTTGGGGCCTGGGCCAAGCGCCACGCGGA | + |
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Preference number: 5 (lower is better) Translates to: SGPRRARTSGPLPRR*ERAPGWGLGQAPRG Trigger: TCCGCGTGGCGCTTGGCCCAGGCCCCAACCCGGTGCACGTTCGCAGCGTCTCGGCAGTGGGCCAGACGTTCTCGCGCGACGAGGACCTGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 90 bp | ATCTCGGCGTTGCCACAGACGCAGCCCGACGCGTCGGTGCAAGCTTaGGACCCCACTCTCAGCGCGCCCGACCCGTGGAAGCGCAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: ISALPQTQPDASVQA*DPTLSAPDPWKRRR Trigger: CCGCCTGCGCTTCCACGGGTCGGGCGCGCTGAGAGTGGGGTCCCAAGCTTGCACCGACGCGTCGGGCTGCGTCTGTGGCAACGCCGAGAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 90 bp | CCACGCGGAAAGATCCATCGCGCGGGAAGAGGACGTCGTCGTAGCTaGAGGGCACGCGCTCGGCGTCCACGGAGAAGAGCCCGGGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: PRGKIHRAGRGRRRS*RARARRPRRRARAP Trigger: AGGCGCCCGGGCTCTTCTCCGTGGACGCCGAGCGCGTGCCCTGCAGCTACGACGACGTCCTCTTCCCGCGCGATGGATCTTTCCGCGTGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 90 bp | ACGGCAGCATCTCGGCGTTGCCACAGACGCAGCCCGACGCGTCGGTaGAAGCTTGGGACCCCACTCTCAGCGCGCCCGACCCGTGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: TAASRRCHRRSPTRR*KLGTPLSARPTRGS Trigger: GCTTCCACGGGTCGGGCGCGCTGAGAGTGGGGTCCCAAGCTTGCACCGACGCGTCGGGCTGCGTCTGTGGCAACGCCGAGATGCTGCCGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 90 bp | CCGGTCGCGTGCTCGGTCTCCACCAGCACCACCTGGATCTCGGTGTaGGCGTCGCGCAGCACCTTGGACACAGCCACCTGCAGGCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: PVACSVSTSTTWISV*ASRSTLDTATCRPW Trigger: CCAGGGCCTGCAGGTGGCTGTGTCCAAGGTGCTGCGCGACGCCCACACCGAGATCCAGGTGGTGCTGGTGGAGACCGAGCACGCGACCGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS TCA 90 bp | GGGCGCCAGGGTTACAAGCTGGGTCCGAGTCGCCTCCTGCAGCGCTaGGTGCAGCTCCCGAGGCCAGGACCAACTCCCCGTCCAGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: GRQGYKLGPSRLLQR*VQLPRPGPTPRPEA Trigger: TGCCTCTGGACGGGGAGTTGGTCCTGGCCTCGGGAGCTGCACTCAGCGCTGCAGGAGGCGACTCGGACCCAGCTTGTAACCCTGGCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 90 bp | GAGCAACGGGGCGCCAGGGTTACAAGCTGGGTCCGAGTCGCCTCCTaGAGCGCTGAGTGCAGCTCCCGAGGCCAGGACCAACTCCCCGTC | + |
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Preference number: 5 (lower is better) Translates to: EQRGARVTSWVRVAS*SAECSSRGQDQLPV Trigger: GACGGGGAGTTGGTCCTGGCCTCGGGAGCTGCACTCAGCGCTGCAGGAGGCGACTCGGACCCAGCTTGTAACCCTGGCGCCCCGTTGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 90 bp | CGGGACGCCAGGAAAGCAGTCAGGTCCTCGTCGCGCGAGAACGTCTaGCCCACTGCCGAGACGCTGCGAACGTGCACCGGGTTGGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: RDARKAVRSSSRENV*PTAETLRTCTGLGP Trigger: AGGCCCCAACCCGGTGCACGTTCGCAGCGTCTCGGCAGTGGGCCAGACGTTCTCGCGCGACGAGGACCTGACTGCTTTCCTGGCGTCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 90 bp | GCCAGGGTTACAAGCTGGGTCCGAGTCGCCTCCTGCAGCGCTGAGTaGAGCTCCCGAGGCCAGGACCAACTCCCCGTCCAGAGGCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: ARVTSWVRVASCSAE*SSRGQDQLPVQRQE Trigger: CTCCTGCCTCTGGACGGGGAGTTGGTCCTGGCCTCGGGAGCTGCACTCAGCGCTGCAGGAGGCGACTCGGACCCAGCTTGTAACCCTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 90 bp | CAGGAAAGCAGTCAGGTCCTCGTCGCGCGAGAACGTCTGGCCCACTaGCGAGACGCTGCGAACGTGCACCGGGTTGGGGCCTGGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: QESSQVLVARERLAH*RDAANVHRVGAWAK Trigger: CTTGGCCCAGGCCCCAACCCGGTGCACGTTCGCAGCGTCTCGGCAGTGGGCCAGACGTTCTCGCGCGACGAGGACCTGACTGCTTTCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 90 bp | CGGAGCTCCAGAGGTGCGGGTCAAGCCAGGAGAAGCGATCGGGATTaGGGAAGAGCAACGGGGCGCCAGGGTTACAAGCTGGGTCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: RSSRGAGQARRSDRD*GRATGRQGYKLGPS Trigger: ACTCGGACCCAGCTTGTAACCCTGGCGCCCCGTTGCTCTTCCGCAATCCCGATCGCTTCTCCTGGCTTGACCCGCACCTCTGGAGCTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 90 bp | AGGCCAGGACCAACTCCCCGTCCAGAGGCAGGAGCATATCCGAGATaGCGTGACTGTCTCGTACCAGGACCGACACCATCTTGTCCGCCG | + |
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Preference number: 5 (lower is better) Translates to: RPGPTPRPEAGAYPR*RDCLVPGPTPSCPP Trigger: CGGCGGACAAGATGGTGTCGGTCCTGGTACGAGACAGTCACGCCATCTCGGATATGCTCCTGCCTCTGGACGGGGAGTTGGTCCTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS TCA 90 bp | AGGACCAACTCCCCGTCCAGAGGCAGGAGCATATCCGAGATGGCGTaGCTGTCTCGTACCAGGACCGACACCATCTTGTCCGCCGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: RTNSPSRGRSISEMA*LSRTRTDTILSAGN Trigger: GTTCCCGGCGGACAAGATGGTGTCGGTCCTGGTACGAGACAGTCACGCCATCTCGGATATGCTCCTGCCTCTGGACGGGGAGTTGGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 90 bp | GAAGGAGGTATTGGGGACCCAAAGTTTGTAGGCGGCCCGAGTCATTaGACAGAGCTGCAGCCACAGCAGGACCCGGCCCAGAGCACCCAT | + |
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Preference number: 5 (lower is better) Translates to: EGGIGDPKFVGGPSH*TELQPQQDPAQSTH Trigger: ATGGGTGCTCTGGGCCGGGTCCTGCTGTGGCTGCAGCTCTGTGCAATGACTCGGGCCGCCTACAAACTTTGGGTCCCCAATACCTCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 90 bp | TCCAGCAGCCGCGCTCGGTACCGCTCCAGGTCAAATGTGGGGTCGTaGGTCAACGACACGATAGCTCCGCAGAGGTCACAGCATTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: SSSRARYRSRSNVGS*VNDTIAPQRSQHCP Trigger: AGGACAATGCTGTGACCTCTGCGGAGCTATCGTGTCGTTGACCCACGACCCCACATTTGACCTGGAGCGGTACCGAGCGCGGCTGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 90 bp | ACTGAACCGCATCTCCCGCGCACGGGGTCCGGTTCTGGTTCCAGTTaGAGGCAGTATCGAAGGAGGTATTGGGGACCCAAAGTTTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: TEPHLPRTGSGSGSS*RQYRRRYWGPKVCR Trigger: CCTACAAACTTTGGGTCCCCAATACCTCCTTCGATACTGCCTCCAACTGGAACCAGAACCGGACCCCGTGCGCGGGAGATGCGGTTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 90 bp | GGGTCCGGTTCTGGTTCCAGTTGGAGGCAGTATCGAAGGAGGTATTaGGGACCCAAAGTTTGTAGGCGGCCCGAGTCATTGCACAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: GSGSGSSWRQYRRRY*GPKVCRRPESLHRA Trigger: AGCTCTGTGCAATGACTCGGGCCGCCTACAAACTTTGGGTCCCCAATACCTCCTTCGATACTGCCTCCAACTGGAACCAGAACCGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR CAA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAAGGCAGCATCTCGGCGTaGCCACAGACGCAGCCCGAC | + |
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Preference number: 5 (lower is better) Translates to: NKQLFIGQGKSVLATRREGSISA*PQTQPD Trigger: GTCGGGCTGCGTCTGTGGCAACGCCGAGATGCTGCC...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS-3UTR CAA 90 bp | AACAAGCAACTCTTTATTGGGCAAGGTAAGTCTGTCCTTGCCACCAGGAGAGAAGCGTCGCGCAGCACCTaGGACACAGCCACCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: NKQLFIGQGKSVLATRREASRST*DTATCR Trigger: CCTGCAGGTGGCTGTGTCCAAGGTGCTGCGCGACGC...TTCTCTCCTGGTGGCAAGGACAGACTTACCTTGCCCAATAAAGAGTTGCTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | TGTGCCACCGCGTCCTGGAGGAGCGCGTGGCCCAGCTaGCCCGCCGCGCCGGTCGCGTGCTCGGTCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: CATASWRSAWPS*PAAPVACSVST Trigger: GGTGGAGACCGAGCACGCGACCGGCGCGGCGGGGCAGCTGGGCCACGCGCTCCTCCAGGACGCGGTGGCACA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 72 bp | ACGCTGCCTTGTGCCACCGCGTCCTGGAGGAGCGCGTaGCCCAGCTGCCCCGCCGCGCCGGTCGCGTGCTCG | + |
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Preference number: 6 (lower is better) Translates to: TLPCATASWRSA*PSCPAAPVACS Trigger: CGAGCACGCGACCGGCGCGGCGGGGCAGCTGGGCCACGCGCTCCTCCAGGACGCGGTGGCACAAGGCAGCGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 72 bp | ACGATACCGAGCACGCTGCCTTGTGCCACCGCGTCCTaGAGGAGCGCGTGGCCCAGCTGCCCCGCCGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: TIPSTLPCATAS*RSAWPSCPAAP Trigger: CGGCGCGGCGGGGCAGCTGGGCCACGCGCTCCTCCAGGACGCGGTGGCACAAGGCAGCGTGCTCGGTATCGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | TGGCAGGCGGCCTGGGGACAGCGGCCGCCCAAGGGCTaGAGCAGAGACGCGCAGATCCACGGCAGCATCTCG | + |
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Preference number: 6 (lower is better) Translates to: WQAAWGQRPPKG*SRDAQIHGSIS Trigger: CGAGATGCTGCCGTGGATCTGCGCGTCTCTGCTGCAGCCCTTGGGCGGCCGCTGTCCCCAGGCCGCCTGCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 72 bp | CAAGCTTGGGACCCCACTCTCAGCGCGCCCGACCCGTaGAAGCGCAGGCGGCCCTCGCGGGACGCCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: QAWDPTLSAPDP*KRRRPSRDARK Trigger: TTTCCTGGCGTCCCGCGAGGGCCGCCTGCGCTTCCACGGGTCGGGCGCGCTGAGAGTGGGGTCCCAAGCTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CAA 90 bp | CATCTCGGCGTTGCCACAGACGCAGCCCGACGCGTCGGTGCAAGCTaGGGACCCCACTCTCAGCGCGCCCGACCCGTGGAAGCGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: HLGVATDAARRVGAS*GPHSQRARPVEAQA Trigger: CGCCTGCGCTTCCACGGGTCGGGCGCGCTGAGAGTGGGGTCCCAAGCTTGCACCGACGCGTCGGGCTGCGTCTGTGGCAACGCCGAGATG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | TCTCGGCGTTGCCACAGACGCAGCCCGACGCGTCGGTaGAAGCTTGGGACCCCACTCTCAGCGCGCCCGACC | + |
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Preference number: 6 (lower is better) Translates to: SRRCHRRSPTRR*KLGTPLSARPT Trigger: GGTCGGGCGCGCTGAGAGTGGGGTCCCAAGCTTGCACCGACGCGTCGGGCTGCGTCTGTGGCAACGCCGAGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | CAGGGTCGCCGACACGATACCGAGCACGCTGCCTTGTaGCACCGCGTCCTGGAGGAGCGCGTGGCCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: QGRRHDTEHAAL*HRVLEERVAQL Trigger: CAGCTGGGCCACGCGCTCCTCCAGGACGCGGTGGCACAAGGCAGCGTGCTCGGTATCGTGTCGGCGACCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | ACTGCCGCAGGGTCGCCGACACGATACCGAGCACGCTaGCTTGTGCCACCGCGTCCTGGAGGAGCGCGTGGC | + |
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Preference number: 6 (lower is better) Translates to: TAAGSPTRYRAR*LVPPRPGGARG Trigger: GCCACGCGCTCCTCCAGGACGCGGTGGCACAAGGCAGCGTGCTCGGTATCGTGTCGGCGACCCTGCGGCAGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | AGTCAGGTCCTCGTCGCGCGAGAACGTCTGGCCCACTaGCGAGACGCTGCGAACGTGCACCGGGTTGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SQVLVARERLAH*RDAANVHRVGA Trigger: GGCCCCAACCCGGTGCACGTTCGCAGCGTCTCGGCAGTGGGCCAGACGTTCTCGCGCGACGAGGACCTGACT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 72 bp | GGCCCACTGCCGAGACGCTGCGAACGTGCACCGGGTTaGGGCCTGGGCCAAGCGCCACGCGGAAAGATCCAT | + |
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Preference number: 6 (lower is better) Translates to: GPLPRRCERAPG*GLGQAPRGKIH Trigger: ATGGATCTTTCCGCGTGGCGCTTGGCCCAGGCCCCAACCCGGTGCACGTTCGCAGCGTCTCGGCAGTGGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 72 bp | TTGCCACAGACGCAGCCCGACGCGTCGGTGCAAGCTTaGGACCCCACTCTCAGCGCGCCCGACCCGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LPQTQPDASVQA*DPTLSAPDPWK Trigger: CTTCCACGGGTCGGGCGCGCTGAGAGTGGGGTCCCAAGCTTGCACCGACGCGTCGGGCTGCGTCTGTGGCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CAA 72 bp | GTTGCCACAGACGCAGCCCGACGCGTCGGTGCAAGCTaGGGACCCCACTCTCAGCGCGCCCGACCCGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VATDAARRVGAS*GPHSQRARPVE Trigger: TTCCACGGGTCGGGCGCGCTGAGAGTGGGGTCCCAAGCTTGCACCGACGCGTCGGGCTGCGTCTGTGGCAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | ACAAGCTGGGTCCGAGTCGCCTCCTGCAGCGCTGAGTaGAGCTCCCGAGGCCAGGACCAACTCCCCGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: TSWVRVASCSAE*SSRGQDQLPVQ Trigger: CTGGACGGGGAGTTGGTCCTGGCCTCGGGAGCTGCACTCAGCGCTGCAGGAGGCGACTCGGACCCAGCTTGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | GGCGCCAGGGTTACAAGCTGGGTCCGAGTCGCCTCCTaGAGCGCTGAGTGCAGCTCCCGAGGCCAGGACCAA | + |
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Preference number: 6 (lower is better) Translates to: GARVTSWVRVAS*SAECSSRGQDQ Trigger: TTGGTCCTGGCCTCGGGAGCTGCACTCAGCGCTGCAGGAGGCGACTCGGACCCAGCTTGTAACCCTGGCGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CAA 90 bp | TCCACCAGCACCACCTGGATCTCGGTGTGGGCGTCGCGCAGCACCTaGGACACAGCCACCTGCAGGCCCTGGTACTGGGGCTGCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: STSTTWISVWASRST*DTATCRPWYWGCFR Trigger: CCTGAAGCAGCCCCAGTACCAGGGCCTGCAGGTGGCTGTGTCCAAGGTGCTGCGCGACGCCCACACCGAGATCCAGGTGGTGCTGGTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS TCA 72 bp | CGTACCAGGACCGACACCATCTTGTCCGCCGGGAACTaGACCGCATCTCCCGCGCACGGGGTCCGGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RTRTDTILSAGN*TASPAHGVRFW Trigger: CCAGAACCGGACCCCGTGCGCGGGAGATGCGGTTCAGTTCCCGGCGGACAAGATGGTGTCGGTCCTGGTACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS TCA 72 bp | GGTTACAAGCTGGGTCCGAGTCGCCTCCTGCAGCGCTaGGTGCAGCTCCCGAGGCCAGGACCAACTCCCCGT | + |
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Preference number: 6 (lower is better) Translates to: GYKLGPSRLLQR*VQLPRPGPTPR Trigger: ACGGGGAGTTGGTCCTGGCCTCGGGAGCTGCACTCAGCGCTGCAGGAGGCGACTCGGACCCAGCTTGTAACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | AAGATCCATCGCGCGGGAAGAGGACGTCGTCGTAGCTaGAGGGCACGCGCTCGGCGTCCACGGAGAAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: KIHRAGRGRRRS*RARARRPRRRA Trigger: GGCTCTTCTCCGTGGACGCCGAGCGCGTGCCCTGCAGCTACGACGACGTCCTCTTCCCGCGCGATGGATCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | GCAGAGACGCGCAGATCCACGGCAGCATCTCGGCGTTaGCACAGACGCAGCCCGACGCGTCGGTGCAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: AETRRSTAASRR*HRRSPTRRCKL Trigger: AAGCTTGCACCGACGCGTCGGGCTGCGTCTGTGGCAACGCCGAGATGCTGCCGTGGATCTGCGCGTCTCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | GTGTGGGCGTCGCGCAGCACCTTGGACACAGCCACCTaGAGGCCCTGGTACTGGGGCTGCTTCAGGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VWASRSTLDTAT*RPWYWGCFRKR Trigger: CCTCTTCCTGAAGCAGCCCCAGTACCAGGGCCTGCAGGTGGCTGTGTCCAAGGTGCTGCGCGACGCCCACAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | AGCGGCAGCCCAGCCGATACGGGCTCAGCGTCTTCATaGCTTCTCCACCTGAGCCTTCCGCTGCGGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SGSPADTGSASS*LLHLSLPLRCS Trigger: GCTGCACCGCAGCGGAAGGCTCAGGTGGAGAAGGCATGAAGACGCTGAGCCCGTATCGGCTGGGCTGCCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 72 bp | AGGAAAGCAGTCAGGTCCTCGTCGCGCGAGAACGTCTaGCCCACTGCCGAGACGCTGCGAACGTGCACCGGG | + |
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Preference number: 6 (lower is better) Translates to: RKAVRSSSRENV*PTAETLRTCTG Trigger: CCCGGTGCACGTTCGCAGCGTCTCGGCAGTGGGCCAGACGTTCTCGCGCGACGAGGACCTGACTGCTTTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CAA 72 bp | AGCAGAGACGCGCAGATCCACGGCAGCATCTCGGCGTaGCCACAGACGCAGCCCGACGCGTCGGTGCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SRDAQIHGSISA*PQTQPDASVQA Trigger: AGCTTGCACCGACGCGTCGGGCTGCGTCTGTGGCAACGCCGAGATGCTGCCGTGGATCTGCGCGTCTCTGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CAA 90 bp | CCGGAGCTCCAGAGGTGCGGGTCAAGCCAGGAGAAGCGATCGGGATaGCGGAAGAGCAACGGGGCGCCAGGGTTACAAGCTGGGTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: PELQRCGSSQEKRSG*RKSNGAPGLQAGSE Trigger: CTCGGACCCAGCTTGTAACCCTGGCGCCCCGTTGCTCTTCCGCAATCCCGATCGCTTCTCCTGGCTTGACCCGCACCTCTGGAGCTCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS GCA 72 bp | AGAGGTGCGGGTCAAGCCAGGAGAAGCGATCGGGATTaGGGAAGAGCAACGGGGCGCCAGGGTTACAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RGAGQARRSDRD*GRATGRQGYKL Trigger: CAGCTTGTAACCCTGGCGCCCCGTTGCTCTTCCGCAATCCCGATCGCTTCTCCTGGCTTGACCCGCACCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 72 bp | CGCGCTCGGTACCGCTCCAGGTCAAATGTGGGGTCGTaGGTCAACGACACGATAGCTCCGCAGAGGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: RARYRSRSNVGS*VNDTIAPQRSQ Trigger: CTGTGACCTCTGCGGAGCTATCGTGTCGTTGACCCACGACCCCACATTTGACCTGGAGCGGTACCGAGCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CAA 72 bp | CAGAGGTGCGGGTCAAGCCAGGAGAAGCGATCGGGATaGCGGAAGAGCAACGGGGCGCCAGGGTTACAAGCT | + |
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Preference number: 6 (lower is better) Translates to: QRCGSSQEKRSG*RKSNGAPGLQA Trigger: AGCTTGTAACCCTGGCGCCCCGTTGCTCTTCCGCAATCCCGATCGCTTCTCCTGGCTTGACCCGCACCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CAA 72 bp | GCATCTCCCGCGCACGGGGTCCGGTTCTGGTTCCAGTaGGAGGCAGTATCGAAGGAGGTATTGGGGACCCAA | + |
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Preference number: 6 (lower is better) Translates to: ASPAHGVRFWFQ*EAVSKEVLGTQ Trigger: TTGGGTCCCCAATACCTCCTTCGATACTGCCTCCAACTGGAACCAGAACCGGACCCCGTGCGCGGGAGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS TCA 72 bp | TCCCCGTCCAGAGGCAGGAGCATATCCGAGATGGCGTaGCTGTCTCGTACCAGGACCGACACCATCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: SPSRGRSISEMA*LSRTRTDTILS Trigger: GGACAAGATGGTGTCGGTCCTGGTACGAGACAGTCACGCCATCTCGGATATGCTCCTGCCTCTGGACGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 72 bp | CATCTCCCGCGCACGGGGTCCGGTTCTGGTTCCAGTTaGAGGCAGTATCGAAGGAGGTATTGGGGACCCAAA | + |
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Preference number: 6 (lower is better) Translates to: HLPRTGSGSGSS*RQYRRRYWGPK Trigger: TTTGGGTCCCCAATACCTCCTTCGATACTGCCTCCAACTGGAACCAGAACCGGACCCCGTGCGCGGGAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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| CDS CCA 72 bp | CCAACTCCCCGTCCAGAGGCAGGAGCATATCCGAGATaGCGTGACTGTCTCGTACCAGGACCGACACCATCT | + |
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Preference number: 6 (lower is better) Translates to: PTPRPEAGAYPR*RDCLVPGPTPS Trigger: AGATGGTGTCGGTCCTGGTACGAGACAGTCACGCCATCTCGGATATGCTCCTGCCTCTGGACGGGGAGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021707.8 |
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