Pregenerated sensors for AMMECR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042225Ensembl transcript IDs: ENSMUST00000041317.3
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTAAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTaGGGGCTTCTTTGGTTTGCTCTAACACACATAAGAGATGGAACC | + |
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Preference number: 1 (lower is better) Translates to: VRTGRQAFGAAFGHG*GLLWFALTHIRDGT Trigger: GGTTCCATCTCTTATGTGTGTTAGAGCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR TCA 90 bp | CTAGCCGTACGCTCCCCCGGGCTGAGGAGCTCTGAAATGATGAGATaGTGGAGTAGATGGATTTCACAACAAGATTGGTCTAGTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: LAVRSPGLRSSEMMR*WSRWISQQDWSSLS Trigger: AGACAGACTAGACCAATCTTGTTGTGAAATCCATCTACTCCATCATCTCATCATTTCAGAGCTCCTCAGCCCGGGGGAGCGTACGGCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR GCA 90 bp | GGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTTTGGTTTaGTCTAACACACATAAGAGATGGAACCTATTCCAGATGACACTT | + |
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Preference number: 1 (lower is better) Translates to: GFWSSIWAWLGASLV*SNTHKRWNLFQMTL Trigger: AAGTGTCATCTGGAATAGGTTCCATCTCTTATGTGTGTTAGAGCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR TCA 90 bp | CCCTATAAGGGCAAGAAAATGTCAGGTAGCAGCTTGCTTCTATACTaGAAGACTAATCCACCCACAAAGTGTGTCCAAGGAGAAACAACG | + |
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Preference number: 1 (lower is better) Translates to: PYKGKKMSGSSLLLY*KTNPPTKCVQGETT Trigger: CGTTGTTTCTCCTTGGACACACTTTGTGGGTGGATTAGTCTTTCAGTATAGAAGCAAGCTGCTACCTGACATTTTCTTGCCCTTATAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CCA 90 bp | AAGCCCATGCTAAAGCTCAGCAGCTTATGTTTTCTCTGTATTCAATaGAACTGGCTACTGAGACTGTCTTTCAGGCTAGCAAGTAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: KPMLKLSSLCFLCIQ*NWLLRLSFRLASSF Trigger: GAAGCTACTTGCTAGCCTGAAAGACAGTCTCAGTAGCCAGTTCCATTGAATACAGAGAAAACATAAGCTGCTGAGCTTTAGCATGGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CCA 90 bp | GCATGGCTGGGGGCTTCTTTGGTTTGCTCTAACACACATAAGAGATaGAACCTATTCCAGATGACACTTTCAAATTCTTGCACATTTGAA | + |
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Preference number: 1 (lower is better) Translates to: AWLGASLVCSNTHKR*NLFQMTLSNSCTFE Trigger: TTCAAATGTGCAAGAATTTGAAAGTGTCATCTGGAATAGGTTCCATCTCTTATGTGTGTTAGAGCAAACCAAAGAAGCCCCCAGCCATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR TCA 90 bp | CTTTGGTTTGCTCTAACACACATAAGAGATGGAACCTATTCCAGATaGCACTTTCAAATTCTTGCACATTTGAAGACAGGAAAAGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: LWFALTHIRDGTYSR*HFQILAHLKTGKEA Trigger: GGCCTCTTTTCCTGTCTTCAAATGTGCAAGAATTTGAAAGTGTCATCTGGAATAGGTTCCATCTCTTATGTGTGTTAGAGCAAACCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTCTCCATCACTTTCACTaGCCTCCTCAAGGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: KDWKAGFWSSIWAWLGASLHHFH*PPQGRG Trigger: CCCCCTCCCTTGAGGAGGTCAGTGAAAGTGATGGAG...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTGCTGACCTCGTCCTTTaGAGCCTGCAGGATGGTTAT | + |
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Preference number: 2 (lower is better) Translates to: KDWKAGFWSSIWAWLGASADLVL*SLQDGY Trigger: ATAACCATCCTGCAGGCTTCAAAGGACGAGGTCAGC...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTACAAACTTCCCGGTGTaGGGTGTGCTGTGTGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: KDWKAGFWSSIWAWLGASTNFPV*GVLCVQ Trigger: TTGCACACACAGCACACCGCACACCGGGAAGTTTGT...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTGCGGTGTGCTGTGTGTaGAATGGAACCATTTGCATT | + |
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Preference number: 2 (lower is better) Translates to: KDWKAGFWSSIWAWLGASAVCCV*NGTICI Trigger: AATGCAAATGGTTCCATTGCACACACAGCACACCGC...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTAATCTGGTACCTGGCTaGCCTTGTTTAAGAACAATA | + |
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Preference number: 2 (lower is better) Translates to: KDWKAGFWSSIWAWLGASNLVPG*PCLRTI Trigger: TATTGTTCTTAAACAAGGTCAGCCAGGTACCAGATT...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTGATCTTCTTAACAAATaGCATTGTCCTACCCGTTAC | + |
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Preference number: 2 (lower is better) Translates to: KDWKAGFWSSIWAWLGASDLLNK*HCPTRY Trigger: GTAACGGGTAGGACAATGGCATTTGTTAAGAAGATC...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CAA 90 bp | AAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTTaGGTTTGCTCTAACACACATAAGAGATGGAACCTATTCCAGATG | + |
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Preference number: 2 (lower is better) Translates to: KAGFWSSIWAWLGAS*VCSNTHKRWNLFQM Trigger: CATCTGGAATAGGTTCCATCTCTTATGTGTGTTAGAGCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTAATTGTTCTATAACATaGGGCAGTCTCTTCTACAGT | + |
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Preference number: 2 (lower is better) Translates to: KDWKAGFWSSIWAWLGASNCSIT*GSLFYS Trigger: ACTGTAGAAGAGACTGCCTCATGTTATAGAACAATT...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTTCTGAAATGATGAGATaGTGGAGTAGATGGATTTCA | + |
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Preference number: 2 (lower is better) Translates to: KDWKAGFWSSIWAWLGASSEMMR*WSRWIS Trigger: TGAAATCCATCTACTCCATCATCTCATCATTTCAGA...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTGTAGAATATACATTCTaGAGCATTTCACTCACCACT | + |
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Preference number: 2 (lower is better) Translates to: KDWKAGFWSSIWAWLGASVEYTF*SISLTT Trigger: AGTGGTGAGTGAAATGCTGCAGAATGTATATTCTAC...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTATTAACATATCTGAATaGCATCTTTACAGGTCTACC | + |
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Preference number: 2 (lower is better) Translates to: KDWKAGFWSSIWAWLGASINISE*HLYRST Trigger: GGTAGACCTGTAAAGATGGCATTCAGATATGTTAAT...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR TCA 90 bp | GACAATGAATTCAGCCAATTACAAACTAGACAAGGATTTTCTGAACTACCAGTCTGCAGAGAGGCCCAGTaGCTGGTTGTGCGGCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: DNEFSQLQTRQGFSELPVCREAQ*LVVRLS Trigger: ACTGAGCCGCACAACCAGTCACTGGGCCTCTCTGCA...GACTGGTAGTTCAGAAAATCCTTGTCTAGTTTGTAATTGGCTGAATTCATTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR TCA 90 bp | ATCAGTAAGTTTTCTTTGTGCCATGGGAAGTATAGCCCTGCAAATGAGCTAGGCGTTCCTTGCTCTCTGTaGCAAGTCCTATCATGGACC | + |
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Preference number: 2 (lower is better) Translates to: ISKFSLCHGKYSPANELGVPCSL*QVLSWT Trigger: GGTCCATGATAGGACTTGTCACAGAGAGCAAGGAAC...GCCTAGCTCATTTGCAGGGCTATACTTCCCATGGCACAAAGAAAACTTACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR CCA 90 bp | ATCAGTAAGTTTTCTTTGTGCCATGGGAAGTATAGCCCTGCAAATGAGCTAGGCGTCGAAGCTTCACCATaGCAACGGAAACTATCATCA | + |
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Preference number: 2 (lower is better) Translates to: ISKFSLCHGKYSPANELGVEASP*QRKLSS Trigger: TGATGATAGTTTCCGTTGCCATGGTGAAGCTTCGAC...GCCTAGCTCATTTGCAGGGCTATACTTCCCATGGCACAAAGAAAACTTACTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR CCA 90 bp | CTACAAAGTCTTTTAGTCAACAGCTACTTAGACACAAAAATGCACTATGCATCAAGGTGTAGGGTCTCCTaGGAAGAGGTCTGCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LQSLLVNSYLDTKMHYASRCRVS*EEVCRE Trigger: CTCTCTGCAGACCTCTTCCCAGGAGACCCTACACCT...TGATGCATAGTGCATTTTTGTGTCTAAGTAGCTGTTGACTAAAAGACTTTGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CAA 90 bp | AGAGAGCTACTCCAGGTAGCTTTTTGCTTGTTACAAGTCTCACCATaGCATCACCAAAAACTCTTTATGCTGGTGACCGATTCAAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: RELLQVAFCLLQVSP*HHQKLFMLVTDSKE Trigger: TTCCTTTGAATCGGTCACCAGCATAAAGAGTTTTTGGTGATGCAATGGTGAGACTTGTAACAAGCAAAAAGCTACCTGGAGTAGCTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CAA 90 bp | ACCAGGTTACTAAGAAGGGAGGAGAGAGCTACTCCAGGTAGCTTTTaGCTTGTTACAAGTCTCACCATTGCATCACCAAAAACTCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: TRLLRREERATPGSF*LVTSLTIASPKTLY Trigger: ATAAAGAGTTTTTGGTGATGCAATGGTGAGACTTGTAACAAGCAAAAAGCTACCTGGAGTAGCTCTCTCCTCCCTTCTTAGTAACCTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR TCA 90 bp | GACAATGAATTCAGCCAATTACAAACTAGACAAGGATTTTCTGAACTACCAGTCTTGCCAGAATCATCATaGGTTTTCCTGGGGATAAAC | + |
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Preference number: 2 (lower is better) Translates to: DNEFSQLQTRQGFSELPVLPESS*VFLGIN Trigger: GTTTATCCCCAGGAAAACTCATGATGATTCTGGCAA...GACTGGTAGTTCAGAAAATCCTTGTCTAGTTTGTAATTGGCTGAATTCATTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CAA 90 bp | GTGAAAGGGCCTAGCATTGGTTTGTTTGAAGCACACCATTATAGTTaGTATAACACCCTTTACACTACAAAGTCTTTTAGTCAACAGCTA | + |
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Preference number: 2 (lower is better) Translates to: VKGPSIGLFEAHHYS*YNTLYTTKSFSQQL Trigger: TAGCTGTTGACTAAAAGACTTTGTAGTGTAAAGGGTGTTATACAAACTATAATGGTGTGCTTCAAACAAACCAATGCTAGGCCCTTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CAA 90 bp | ACAACTTTGTCATATACAACAAGAGTGAAAGGGCCTAGCATTGGTTaGTTTGAAGCACACCATTATAGTTTGTATAACACCCTTTACACT | + |
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Preference number: 2 (lower is better) Translates to: TTLSYTTRVKGPSIG*FEAHHYSLYNTLYT Trigger: AGTGTAAAGGGTGTTATACAAACTATAATGGTGTGCTTCAAACAAACCAATGCTAGGCCCTTTCACTCTTGTTGTATATGACAAAGTTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR GCA 90 bp | GACAATGAATTCAGCCAATTACAAACTAGACAAGGATTTTCTGAACTACCAGTCACAAAGGTCATCTTTTaGCAGAATCATCATGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: DNEFSQLQTRQGFSELPVTKVIF*QNHHEF Trigger: AAACTCATGATGATTCTGGCAAAAGATGACCTTTGT...GACTGGTAGTTCAGAAAATCCTTGTCTAGTTTGTAATTGGCTGAATTCATTGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CCA 72 bp | GACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATaGCTGGGGGCTTCTTTGGTTTGCTCTAACACACAT | + |
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Preference number: 3 (lower is better) Translates to: DWKAGFWSSIWA*LGASLVCSNTH Trigger: ATGTGTGTTAGAGCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CCA 72 bp | TGTAAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTaGGCATGGCTGGGGGCTTCTTTGGTTTGCTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: CKDWKAGFWSSI*AWLGASLVCSN Trigger: GTTAGAGCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CCA 72 bp | GGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTaGGGGCTTCTTTGGTTTGCTCTAACACACATAAGA | + |
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Preference number: 3 (lower is better) Translates to: GRQAFGAAFGHG*GLLWFALTHIR Trigger: TCTTATGTGTGTTAGAGCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR TCA 72 bp | CGCTCCCCCGGGCTGAGGAGCTCTGAAATGATGAGATaGTGGAGTAGATGGATTTCACAACAAGATTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: RSPGLRSSEMMR*WSRWISQQDWS Trigger: AGACCAATCTTGTTGTGAAATCCATCTACTCCATCATCTCATCATTTCAGAGCTCCTCAGCCCGGGGGAGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR GCA 72 bp | GACAGGAAAAGAGGCCAGTATACAAACTTCCCGGTGTaGGGTGTGCTGTGTGTGCAATGGAACCATTTGCAT | + |
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Preference number: 3 (lower is better) Translates to: DRKRGQYTNFPV*GVLCVQWNHLH Trigger: ATGCAAATGGTTCCATTGCACACACAGCACACCGCACACCGGGAAGTTTGTATACTGGCCTCTTTTCCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR GCA 72 bp | AGCAGCATTTGGGCATGGCTGGGGGCTTCTTTGGTTTaGTCTAACACACATAAGAGATGGAACCTATTCCAG | + |
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Preference number: 3 (lower is better) Translates to: SSIWAWLGASLV*SNTHKRWNLFQ Trigger: CTGGAATAGGTTCCATCTCTTATGTGTGTTAGAGCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR CAA 90 bp | ATCAGTAAGTTTTCTTTGTGCCATGGGAAGTATAGCCCTGCAAATGAGCTAGGCGGCGTAAACAGTTCCTaGCTCTCTGTGACAAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: ISKFSLCHGKYSPANELGGVNSS*LSVTSP Trigger: AGGACTTGTCACAGAGAGCAAGGAACTGTTTACGCC...GCCTAGCTCATTTGCAGGGCTATACTTCCCATGGCACAAAGAAAACTTACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CCA 72 bp | TTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTTTaGTTTGCTCTAACACACATAAGAGATGGAACCTAT | + |
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Preference number: 3 (lower is better) Translates to: FGAAFGHGWGLL*FALTHIRDGTY Trigger: ATAGGTTCCATCTCTTATGTGTGTTAGAGCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR TCA 72 bp | CAAGCCATGGTGGGAAATATTGCTGACCTCGTCCTTTaGAGCCTGCAGGATGGTTATTCTTCAGTAGAACAT | + |
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Preference number: 3 (lower is better) Translates to: QAMVGNIADLVL*SLQDGYSSVEH Trigger: ATGTTCTACTGAAGAATAACCATCCTGCAGGCTTCAAAGGACGAGGTCAGCAATATTTCCCACCATGGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR TCA 72 bp | GGCAAGAAAATGTCAGGTAGCAGCTTGCTTCTATACTaGAAGACTAATCCACCCACAAAGTGTGTCCAAGGA | + |
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Preference number: 3 (lower is better) Translates to: GKKMSGSSLLLY*KTNPPTKCVQG Trigger: TCCTTGGACACACTTTGTGGGTGGATTAGTCTTTCAGTATAGAAGCAAGCTGCTACCTGACATTTTCTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CCA 72 bp | CTCAGCAGCTTATGTTTTCTCTGTATTCAATGGAACTaGCTACTGAGACTGTCTTTCAGGCTAGCAAGTAGC | + |
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Preference number: 3 (lower is better) Translates to: LSSLCFLCIQWN*LLRLSFRLASS Trigger: GCTACTTGCTAGCCTGAAAGACAGTCTCAGTAGCCAGTTCCATTGAATACAGAGAAAACATAAGCTGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CCA 72 bp | CTAAAGCTCAGCAGCTTATGTTTTCTCTGTATTCAATaGAACTGGCTACTGAGACTGTCTTTCAGGCTAGCA | + |
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Preference number: 3 (lower is better) Translates to: LKLSSLCFLCIQ*NWLLRLSFRLA Trigger: TGCTAGCCTGAAAGACAGTCTCAGTAGCCAGTTCCATTGAATACAGAGAAAACATAAGCTGCTGAGCTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CCA 72 bp | GGGGCTTCTTTGGTTTGCTCTAACACACATAAGAGATaGAACCTATTCCAGATGACACTTTCAAATTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: GASLVCSNTHKR*NLFQMTLSNSC Trigger: GCAAGAATTTGAAAGTGTCATCTGGAATAGGTTCCATCTCTTATGTGTGTTAGAGCAAACCAAAGAAGCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR CAA 90 bp | ATCAGTAAGTTTTCTTTGTGCCATGGGAAGTATAGCCCTGCAAATGAGCTAGGCGTTGTAGGTTGTAAATaGTTCTATAACATGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: ISKFSLCHGKYSPANELGVVGCK*FYNMRQ Trigger: CTGCCTCATGTTATAGAACAATTTACAACCTACAAC...GCCTAGCTCATTTGCAGGGCTATACTTCCCATGGCACAAAGAAAACTTACTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR-3UTR CAA 90 bp | CTACAAAGTCTTTTAGTCAACAGCTACTTAGACACAAAAATGCACTATGCATCACCATGGTGGGAAATATaGCTGACCTCGTCCTTTGAA | + |
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Preference number: 3 (lower is better) Translates to: LQSLLVNSYLDTKMHYASPWWEI*LTSSFE Trigger: TTCAAAGGACGAGGTCAGCAATATTTCCCACCATGG...TGATGCATAGTGCATTTTTGTGTCTAAGTAGCTGTTGACTAAAAGACTTTGTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR GCA 72 bp | TATGATTTTAGAGTCCGCATGACCAGTCACGTGACCTaGTCAAGATTGATTAGCACCGTTAAATACATAAAC | + |
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Preference number: 3 (lower is better) Translates to: YDFRVRMTSHVT*SRLISTVKYIN Trigger: GTTTATGTATTTAACGGTGCTAATCAATCTTGAGCAGGTCACGTGACTGGTCATGCGGACTCTAAAATCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR TCA 90 bp | AGCACAGAAGGCGTAAACAGTTCCTTGCTCTCTGTGACAAGTCCTATCATGGACCCGGGAGCCGGGGGATaGGGACGAGGAGGACGGCGA | + |
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Preference number: 4 (lower is better) Translates to: STEGVNSSLLSVTSPIMDPGAGG*GRGGRR Trigger: TCGCCGTCCTCCTCGTCCTCATCCCCCGGCTCCCGG...GTCCATGATAGGACTTGTCACAGAGAGCAAGGAACTGTTTACGCCTTCTGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR GCA 90 bp | AGCACAGAAGGCGTAAACAGTTCCTTGCTCTCTGTGACAAGTCCTATCATGGACGTGGAGACAGCGAGATaGCCCCGCCGCCGCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: STEGVNSSLLSVTSPIMDVETAR*PRRRCR Trigger: GCGGCAGCGGCGGCGGGGGCATCTCGCTGTCTCCAC...GTCCATGATAGGACTTGTCACAGAGAGCAAGGAACTGTTTACGCCTTCTGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR TCA 90 bp | AGCACAGAAGGCGTAAACAGTTCCTTGCTCTCTGTGACAAGTCCTATCATGGACGCAGCACATCTCCGCTaGCACCACCATCTTCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: STEGVNSSLLSVTSPIMDAAHLR*HHHLPG Trigger: TCCCGGAAGATGGTGGTGTCAGCGGAGATGTGCTGC...GTCCATGATAGGACTTGTCACAGAGAGCAAGGAACTGTTTACGCCTTCTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTCCATGTTACAAACAGTaGGTAGGGCTCGTTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KDWKAGFWSSIWAWLGASPCYKQ*VGLVGE Trigger: TTCACCAACGAGCCCTACCCACTGTTTGTAACATGG...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CCA 90 bp | AAGGACTGGAAGGCAGGCTTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTCTCATCCCTTGTCATTaGTGGAAAACGGCTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KDWKAGFWSSIWAWLGASLIPCH*WKTAVF Trigger: AAAGACAGCCGTTTTCCACCAATGACAAGGGATGAG...AGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAAGCCTGCCTTCCAGTCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR GCA 90 bp | ACAAATGCCATTGTCCTACCCGTTACCATGATGCTCTTAACTAACAATGTCGAAACTGGCTCTCCCCGCTaGAGTGAGAGGAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNAIVLPVTMMLLTNNVETGSPR*SERRRR Trigger: CCTCCTCCTCCTCTCACTGCAGCGGGGAGAGCCAGT...TTCGACATTGTTAGTTAAGAGCATCATGGTAACGGGTAGGACAATGGCATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CCA 90 bp | CTACAAAGTCTTTTAGTCAACAGCTACTTAGACACAAAAATGCACTATGCATCATCCGCAGCTCAGAGGTaGAGACAGCGAGATGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQSLLVNSYLDTKMHYASSAAQR*RQRDAP Trigger: GGGGGCATCTCGCTGTCTCCACCTCTGAGCTGCGGA...TGATGCATAGTGCATTTTTGTGTCTAAGTAGCTGTTGACTAAAAGACTTTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CCA 90 bp | ACAAATGCCATTGTCCTACCCGTTACCATGATGCTCTTAACTAACAATGTCGAACCTCCGGTAGGTAGGTaGCGGTGCGTTTTGATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TNAIVLPVTMMLLTNNVEPPVGR*RCVLIL Trigger: AAGGATCAAAACGCACCGCCACCTACCTACCGGAGG...TTCGACATTGTTAGTTAAGAGCATCATGGTAACGGGTAGGACAATGGCATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CCA 90 bp | ATCAGTAAGTTTTCTTTGTGCCATGGGAAGTATAGCCCTGCAAATGAGCTAGGCGGAATAATGGTTGTATaGCGGAAGGGGATGCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ISKFSLCHGKYSPANELGGIMVV*RKGMPD Trigger: ATCGGGCATCCCCTTCCGCCATACAACCATTATTCC...GCCTAGCTCATTTGCAGGGCTATACTTCCCATGGCACAAAGAAAACTTACTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CAA 72 bp | TTTTGGAGCAGCATTTGGGCATGGCTGGGGGCTTCTTaGGTTTGCTCTAACACACATAAGAGATGGAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: FWSSIWAWLGAS*VCSNTHKRWNL Trigger: TAGGTTCCATCTCTTATGTGTGTTAGAGCAAACCAAAGAAGCCCCCAGCCATGCCCAAATGCTGCTCCAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CAA 72 bp | GAAGGGAGGAGAGAGCTACTCCAGGTAGCTTTTTGCTaGTTACAAGTCTCACCATTGCATCACCAAAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: EGRRELLQVAFC*LQVSPLHHQKL Trigger: GAGTTTTTGGTGATGCAATGGTGAGACTTGTAACAAGCAAAAAGCTACCTGGAGTAGCTCTCTCCTCCCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR TCA 90 bp | ATCAGTAAGTTTTCTTTGTGCCATGGGAAGTATAGCCCTGCAAATGAGCTAGGCAATGAGTCTATGGTCTaGATATGGTCCCATCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISKFSLCHGKYSPANELGNESMV*IWSHPC Trigger: GCAAGGATGGGACCATATTCAGACCATAGACTCATT...GCCTAGCTCATTTGCAGGGCTATACTTCCCATGGCACAAAGAAAACTTACTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CCA 90 bp | AGCACAGAAGGCGTAAACAGTTCCTTGCTCTCTGTGACAAGTCCTATCATGGACCTGAATGCAAATTCATaGCAGAAAAGGTACCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: STEGVNSSLLSVTSPIMDLNANS*QKRYLC Trigger: GCATAGGTACCTTTTCTGCCATGAATTTGCATTCAG...GTCCATGATAGGACTTGTCACAGAGAGCAAGGAACTGTTTACGCCTTCTGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR GCA 90 bp | ACAAATGCCATTGTCCTACCCGTTACCATGATGCTCTTAACTAACAATGTCGAAGTAGGTAGGTGGCGGTaGGTTTTGATCCTTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TNAIVLPVTMMLLTNNVEVGRWR*VLILFH Trigger: ATGAAAAAGGATCAAAACGCACCGCCACCTACCTAC...TTCGACATTGTTAGTTAAGAGCATCATGGTAACGGGTAGGACAATGGCATTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CCA 90 bp | GACAATGAATTCAGCCAATTACAAACTAGACAAGGATTTTCTGAACTACCAGTCCGAGCAGAAAAGCCTTaGCAGCTCATCCCTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DNEFSQLQTRQGFSELPVRAEKP*QLIPCH Trigger: ATGACAAGGGATGAGCTGCCAAGGCTTTTCTGCTCG...GACTGGTAGTTCAGAAAATCCTTGTCTAGTTTGTAATTGGCTGAATTCATTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR GCA 90 bp | CTACAAAGTCTTTTAGTCAACAGCTACTTAGACACAAAAATGCACTATGCATCAATATGGTCCCATCCTTaGTCCTTTGCAACCTCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSLLVNSYLDTKMHYASIWSHP*SFATSG Trigger: ACCGGAGGTTGCAAAGGAGCAAGGATGGGACCATAT...TGATGCATAGTGCATTTTTGTGTCTAAGTAGCTGTTGACTAAAAGACTTTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR GCA 90 bp | GACAATGAATTCAGCCAATTACAAACTAGACAAGGATTTTCTGAACTACCAGTCGAAGGGGATGCCCGATaGCATTTTGGAAATGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: DNEFSQLQTRQGFSELPVEGDAR*HFGNDD Trigger: ATCATCATTTCCAAAATGGCATCGGGCATCCCCTTC...GACTGGTAGTTCAGAAAATCCTTGTCTAGTTTGTAATTGGCTGAATTCATTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CAA 72 bp | TATATGCTGCCTTTCACAATGATTTCCGCGGCCCATTaGAAAGGTAGCTTATGCTTTTCTAAAACAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YMLPFTMISAAH*KGSLCFSKTVL Trigger: CAACACTGTTTTAGAAAAGCATAAGCTACCTTTCAAATGGGCCGCGGAAATCATTGTGAAAGGCAGCATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CCA 90 bp | GACAATGAATTCAGCCAATTACAAACTAGACAAGGATTTTCTGAACTACCAGTCATCCCTTGTCATTGGTaGAAAACGGCTGTCTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DNEFSQLQTRQGFSELPVIPCHW*KTAVFK Trigger: CTTAAAGACAGCCGTTTTCCACCAATGACAAGGGAT...GACTGGTAGTTCAGAAAATCCTTGTCTAGTTTGTAATTGGCTGAATTCATTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CCA 90 bp | GACAATGAATTCAGCCAATTACAAACTAGACAAGGATTTTCTGAACTACCAGTCTCAGTAATGAGTCTATaGTCTGAATATGGTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: DNEFSQLQTRQGFSELPVSVMSL*SEYGPI Trigger: GATGGGACCATATTCAGACCATAGACTCATTACTGA...GACTGGTAGTTCAGAAAATCCTTGTCTAGTTTGTAATTGGCTGAATTCATTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CCA 90 bp | GACAATGAATTCAGCCAATTACAAACTAGACAAGGATTTTCTGAACTACCAGTCTTTCACTACGGTACCTaGTCAGCTTTATGGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DNEFSQLQTRQGFSELPVFHYGT*SALWFF Trigger: GAAAAACCATAAAGCTGACCAGGTACCGTAGTGAAA...GACTGGTAGTTCAGAAAATCCTTGTCTAGTTTGTAATTGGCTGAATTCATTGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CAA 72 bp | TCATATACAACAAGAGTGAAAGGGCCTAGCATTGGTTaGTTTGAAGCACACCATTATAGTTTGTATAACACC | + |
|
Preference number: 4 (lower is better) Translates to: SYTTRVKGPSIG*FEAHHYSLYNT Trigger: GGTGTTATACAAACTATAATGGTGTGCTTCAAACAAACCAATGCTAGGCCCTTTCACTCTTGTTGTATATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CAA 72 bp | CAACTGGCTAGAACACAACTTGTGCAATTAGAATCTTaGTCTGAGTTAAAGACACATGCTACATATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLARTQLVQLES*SELKTHATYFH Trigger: GTGGAAATATGTAGCATGTGTCTTTAACTCAGACAAAGATTCTAATTGCACAAGTTGTGTTCTAGCCAGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| 3UTR CAA 72 bp | CCTAGCATTGGTTTGTTTGAAGCACACCATTATAGTTaGTATAACACCCTTTACACTACAAAGTCTTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSIGLFEAHHYS*YNTLYTTKSFS Trigger: ACTAAAAGACTTTGTAGTGTAAAGGGTGTTATACAAACTATAATGGTGTGCTTCAAACAAACCAATGCTAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS GCA 90 bp | AAAGTAGGGTTCCCACTCCGCAGCTCAGAGGTGGAGACAGCGAGATaGCCCCGCCGCCGCTGCCGCTGCCGCCGCCGCCGCCGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KVGFPLRSSEVETAR*PRRRCRCRRRRRRR Trigger: GCGGCGGCGGCGGCGGCGGCGGCAGCGGCAGCGGCGGCGGGGGCATCTCGCTGTCTCCACCTCTGAGCTGCGGAGTGGGAACCCTACTTT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS GCA 90 bp | CGCCTCCTAGTCCCAGCTCCCCGGCTCGGCACTGGCTCTCCCCGCTaGAGTGAGAGGAGGAGGAGGCGCCACCACCACCACCCGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLVPAPRLGTGSPR*SERRRRRHHHHPSR Trigger: CCGGCTCGGGTGGTGGTGGTGGCGCCTCCTCCTCCTCTCACTGCAGCGGGGAGAGCCAGTGCCGAGCCGGGGAGCTGGGACTAGGAGGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CAA 90 bp | AGCACAGAAGGCGTAAACAGTTCCTTGCTCTCTGTGACAAGTCCTATCATGGACCATCCACGCAGTCTTTaGTCTCGACCAATCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: STEGVNSSLLSVTSPIMDHPRSL*SRPIFH Trigger: ATGGAAGATTGGTCGAGACAAAAGACTGCGTGGATG...GTCCATGATAGGACTTGTCACAGAGAGCAAGGAACTGTTTACGCCTTCTGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CAA 90 bp | ACAAATGCCATTGTCCTACCCGTTACCATGATGCTCTTAACTAACAATGTCGAACCCATCCTTGCTCCTTaGCAACCTCCGGTAGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TNAIVLPVTMMLLTNNVEPILAP*QPPVGR Trigger: CCTACCTACCGGAGGTTGCAAAGGAGCAAGGATGGG...TTCGACATTGTTAGTTAAGAGCATCATGGTAACGGGTAGGACAATGGCATTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CAA 90 bp | ACAAATGCCATTGTCCTACCCGTTACCATGATGCTCTTAACTAACAATGTCGAAAATATGGTCCCATCCTaGCTCCTTTGCAACCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TNAIVLPVTMMLLTNNVENMVPS*LLCNLR Trigger: CCGGAGGTTGCAAAGGAGCAAGGATGGGACCATATT...TTCGACATTGTTAGTTAAGAGCATCATGGTAACGGGTAGGACAATGGCATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CAA 90 bp | ACAAATGCCATTGTCCTACCCGTTACCATGATGCTCTTAACTAACAATGTCGAAATGCCCGATGCCATTTaGGAAATGATGATGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TNAIVLPVTMMLLTNNVEMPDAI*EMMMLA Trigger: CGCCAGCATCATCATTTCCAAAATGGCATCGGGCAT...TTCGACATTGTTAGTTAAGAGCATCATGGTAACGGGTAGGACAATGGCATTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CAA 90 bp | CTACAAAGTCTTTTAGTCAACAGCTACTTAGACACAAAAATGCACTATGCATCATTGGCAGCTCATCCCTaGTCATTGGTGGAAAACGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQSLLVNSYLDTKMHYASLAAHP*SLVENG Trigger: GCCGTTTTCCACCAATGACAAGGGATGAGCTGCCAA...TGATGCATAGTGCATTTTTGTGTCTAAGTAGCTGTTGACTAAAAGACTTTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS-3UTR CAA 90 bp | ATCAGTAAGTTTTCTTTGTGCCATGGGAAGTATAGCCCTGCAAATGAGCTAGGCTTAGTAATTGGAGCTTaGTATCCTCCTTTTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ISKFSLCHGKYSPANELGLVIGA*YPPFLS Trigger: ACTGAGAAAAGGAGGATACAAAGCTCCAATTACTAA...GCCTAGCTCATTTGCAGGGCTATACTTCCCATGGCACAAAGAAAACTTACTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS GCA 72 bp | TTCCCACTCCGCAGCTCAGAGGTGGAGACAGCGAGATaGCCCCGCCGCCGCTGCCGCTGCCGCCGCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: FPLRSSEVETAR*PRRRCRCRRRR Trigger: GCGGCGGCGGCGGCAGCGGCAGCGGCGGCGGGGGCATCTCGCTGTCTCCACCTCTGAGCTGCGGAGTGGGAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS GCA 72 bp | GTCCCAGCTCCCCGGCTCGGCACTGGCTCTCCCCGCTaGAGTGAGAGGAGGAGGAGGCGCCACCACCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: VPAPRLGTGSPR*SERRRRRHHHH Trigger: GTGGTGGTGGTGGCGCCTCCTCCTCCTCTCACTGCAGCGGGGAGAGCCAGTGCCGAGCCGGGGAGCTGGGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS CCA 72 bp | GCAGAAAAGCCTTGGCAGCTCATCCCTTGTCATTGGTaGAAAACGGCTGTCTTTAAGGGCACTGGTAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: AEKPWQLIPCHW*KTAVFKGTGKC Trigger: ACACTTACCAGTGCCCTTAAAGACAGCCGTTTTCCACCAATGACAAGGGATGAGCTGCCAAGGCTTTTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS CAA 72 bp | ATGGTTGTATGGCGGAAGGGGATGCCCGATGCCATTTaGGAAATGATGATGCTGGCGATGAGCAAGGTATTC | + |
|
Preference number: 6 (lower is better) Translates to: MVVWRKGMPDAI*EMMMLAMSKVF Trigger: GAATACCTTGCTCATCGCCAGCATCATCATTTCCAAAATGGCATCGGGCATCCCCTTCCGCCATACAACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS CAA 90 bp | TCAGGAATAATGGTTGTATGGCGGAAGGGGATGCCCGATGCCATTTaGGAAATGATGATGCTGGCGATGAGCAAGGTATTCAGCATAACT | + |
|
Preference number: 6 (lower is better) Translates to: SGIMVVWRKGMPDAI*EMMMLAMSKVFSIT Trigger: AGTTATGCTGAATACCTTGCTCATCGCCAGCATCATCATTTCCAAAATGGCATCGGGCATCCCCTTCCGCCATACAACCATTATTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS GCA 72 bp | GTCCTGAATGCAAATTCATGGCAGAAAAGGTACCTATaGATCCACGCAGTCTTTTGTCTCGACCAATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLNANSWQKRYL*IHAVFCLDQSS Trigger: GGAAGATTGGTCGAGACAAAAGACTGCGTGGATGCATAGGTACCTTTTCTGCCATGAATTTGCATTCAGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS CAA 72 bp | ATGGCAGAAAAGGTACCTATGCATCCACGCAGTCTTTaGTCTCGACCAATCTTCCATGTTACAAACAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: MAEKVPMHPRSL*SRPIFHVTNSG Trigger: CCCACTGTTTGTAACATGGAAGATTGGTCGAGACAAAAGACTGCGTGGATGCATAGGTACCTTTTCTGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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| CDS TCA 72 bp | TTGTATCCTCCTTTTCTCAGTAATGAGTCTATGGTCTaGATATGGTCCCATCCTTGCTCCTTTGCAACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LYPPFLSNESMV*IWSHPCSFATS Trigger: GGAGGTTGCAAAGGAGCAAGGATGGGACCATATTCAGACCATAGACTCATTACTGAGAAAAGGAGGATACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041317.3 |
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