Pregenerated sensors for AMIGO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032593Ensembl transcript IDs: ENSMUST00000085060.3
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGTCAGACAGCACAGTGCTGCCAGCTCATCATTGGGCAGGCACTaGCCGTCTTCCACACCCACCCCAGTGGGTGTGCAGGGCGCATGC | + |
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Preference number: 1 (lower is better) Translates to: AVRQHSAASSSLGRH*PSSTPTPVGVQGAC Trigger: GCATGCGCCCTGCACACCCACTGGGGTGGGTGTGGAAGACGGTCAGTGCCTGCCCAATGATGAGCTGGCAGCACTGTGCTGTCTGACTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR TCA 90 bp | AAGGCTCATTTCCTCCTTCCATCTCAGAGTGGAAGCTGGATCTTCTaGGCTGCCAGTTCCCTCCGGGCAGGGAGGGGAAGTGTGGTATGC | + |
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Preference number: 1 (lower is better) Translates to: KAHFLLPSQSGSWIF*AASSLRAGRGSVVC Trigger: GCATACCACACTTCCCCTCCCTGCCCGGAGGGAACTGGCAGCTCAGAAGATCCAGCTTCCACTCTGAGATGGAAGGAGGAAATGAGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR GCA 90 bp | GGGAAGTGTGGTATGCTTGACTCTTCTATACCACACCCTGACATCTaGATTAACTCCTGGGGGTGGTCCCCAGACTCTGATGCCAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: GKCGMLDSSIPHPDI*INSWGWSPDSDARA Trigger: AGCCCTGGCATCAGAGTCTGGGGACCACCCCCAGGAGTTAATGCAGATGTCAGGGTGTGGTATAGAAGAGTCAAGCATACCACACTTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR CCA 90 bp | TCCACAGGAGTTGCAAAGCTTTCAGGAGGCTGGGTGGCAGCAGACTaGGTCCTCTTTCAGTACAGGGAAGGCTCATTTCCTCCTTCCATC | + |
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Preference number: 1 (lower is better) Translates to: STGVAKLSGGWVAAD*VLFQYREGSFPPSI Trigger: GATGGAAGGAGGAAATGAGCCTTCCCTGTACTGAAAGAGGACCCAGTCTGCTGCCACCCAGCCTCCTGAAAGCTTTGCAACTCCTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR GCA 90 bp | TGTACCACTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTaGTGCCAGCTCATCATTGGGCAGGCACTGACCGTCTTCCACACC | + |
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Preference number: 1 (lower is better) Translates to: CTTFITKCHSSQTAQ*CQLIIGQALTVFHT Trigger: GGTGTGGAAGACGGTCAGTGCCTGCCCAATGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAGTGGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGCTCATCATTGGGCAGGCACTGACCGTCTTCCACACCCACCCCAGTGGTGGGTGGCAGCAGACTaGGTCCTCTTTCAGTACAGG | + |
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Preference number: 2 (lower is better) Translates to: LPAHHWAGTDRLPHPPQWWVAAD*VLFQYR Trigger: CCTGTACTGAAAGAGGACCCAGTCTGCTGCCACCCA...CCACTGGGGTGGGTGTGGAAGACGGTCAGTGCCTGCCCAATGATGAGCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCCAGCTCATCATTGGGCAGGCACTGACCGTCTTCCACACCCACCCCAGTGGTATGCTTTTTCCTGCTaGGTTGTGAGCCTTAGGGAT | + |
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Preference number: 2 (lower is better) Translates to: LPAHHWAGTDRLPHPPQWYAFSC*VVSLRD Trigger: ATCCCTAAGGCTCACAACCCAGCAGGAAAAAGCATA...CCACTGGGGTGGGTGTGGAAGACGGTCAGTGCCTGCCCAATGATGAGCTGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTTGCTCACATGCAGTTGTaGGACCAGGCACAGCACGCC | + |
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Preference number: 2 (lower is better) Translates to: GLLLSKDKSPRLVTYLCFAHMQL*DQAQHA Trigger: GGCGTGCTGTGCCTGGTCCCACAACTGCATGTGAGC...AAAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTGGGTCTGCCTGTAGCTaGAGACAGCAGGGCTACTCT | + |
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Preference number: 2 (lower is better) Translates to: RPPALQRQESQVSHLSMLGSACS*RQQGYS Trigger: AGAGTAGCCCTGCTGTCTTCAGCTACAGGCAGACCC...AAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR-3UTR TCA 90 bp | TCATTTCCTCCTTCCATCTCAGAGTGGAAGCTGGATCTTCTGAGCTGCCAGTTCGTGGTCCCCAGACTCTaGTGCCAGGGCTTTTATCAG | + |
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Preference number: 2 (lower is better) Translates to: SFPPSISEWKLDLLSCQFVVPRL*CQGFYQ Trigger: CTGATAAAAGCCCTGGCATCAGAGTCTGGGGACCAC...GAACTGGCAGCTCAGAAGATCCAGCTTCCACTCTGAGATGGAAGGAGGAAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR-3UTR GCA 90 bp | GGCCTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTTGGATCAAGGCTCACATaGAGTTGTGGGACCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: GLLLSKDKSPRLVTYLCFGSRLT*SCGTRH Trigger: GTGCCTGGTCCCACAACTGCATGTGAGCCTTGATCC...AAAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCTCATTTCCTCCTTCCATCTCAGAGTGGAAGCTGGATCTTCTGAGCTGCTCTGAGACCTTGTCCTaGGCTAGTGTTAGAACTGTT | + |
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Preference number: 2 (lower is better) Translates to: EGSFPPSISEWKLDLLSCSETLS*ASVRTV Trigger: AACAGTTCTAACACTAGCTCAGGACAAGGTCTCAGA...GCAGCTCAGAAGATCCAGCTTCCACTCTGAGATGGAAGGAGGAAATGAGCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR CCA 72 bp | TGGGCAGGCACTGACCGTCTTCCACACCCACCCCAGTaGGTGTGCAGGGCGCATGCCCTGAGGGCTCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: WAGTDRLPHPPQ*VCRAHALRALF Trigger: AAACAGAGCCCTCAGGGCATGCGCCCTGCACACCCACTGGGGTGGGTGTGGAAGACGGTCAGTGCCTGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR GCA 72 bp | GGCACTGACCGTCTTCCACACCCACCCCAGTGGGTGTaGAGGGCGCATGCCCTGAGGGCTCTGTTTAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: GTDRLPHPPQWV*RAHALRALFSH Trigger: ATGGCTAAACAGAGCCCTCAGGGCATGCGCCCTGCACACCCACTGGGGTGGGTGTGGAAGACGGTCAGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR TCA 72 bp | CAGCACAGTGCTGCCAGCTCATCATTGGGCAGGCACTaGCCGTCTTCCACACCCACCCCAGTGGGTGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: QHSAASSSLGRH*PSSTPTPVGVQ Trigger: CTGCACACCCACTGGGGTGGGTGTGGAAGACGGTCAGTGCCTGCCCAATGATGAGCTGGCAGCACTGTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR GCA 72 bp | CCTTCCATCTCAGAGTGGAAGCTGGATCTTCTGAGCTaGCAGTTCCCTCCGGGCAGGGAGGGGAAGTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: PSISEWKLDLLS*QFPPGREGKCG Trigger: ACCACACTTCCCCTCCCTGCCCGGAGGGAACTGGCAGCTCAGAAGATCCAGCTTCCACTCTGAGATGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR GCA 72 bp | CACAGCACGCCCCACCAGCAGGTCAGTTCTTTAGACTaGAGCAGCAAGCAGGGCAAGCAGCAGGAGATCTCA | + |
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Preference number: 3 (lower is better) Translates to: HSTPHQQVSSLD*SSKQGKQQEIS Trigger: TGAGATCTCCTGCTGCTTGCCCTGCTTGCTGCTGCAGTCTAAAGAACTGACCTGCTGGTGGGGCGTGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR GCA 72 bp | GCCAGTTCCCTCCGGGCAGGGAGGGGAAGTGTGGTATaGTTGACTCTTCTATACCACACCCTGACATCTGCA | + |
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Preference number: 3 (lower is better) Translates to: ASSLRAGRGSVV*LTLLYHTLTSA Trigger: TGCAGATGTCAGGGTGTGGTATAGAAGAGTCAAGCATACCACACTTCCCCTCCCTGCCCGGAGGGAACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR CCA 72 bp | AACTGTTACAGTAGGATCAAGGCTCACATGCAGTTGTaGGACCAGGCACAGCACGCCCCACCAGCAGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: NCYSRIKAHMQL*DQAQHAPPAGQ Trigger: CTGACCTGCTGGTGGGGCGTGCTGTGCCTGGTCCCACAACTGCATGTGAGCCTTGATCCTACTGTAACAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR GCA 72 bp | AGTGTTAGAACTGTTACAGTAGGATCAAGGCTCACATaGAGTTGTGGGACCAGGCACAGCACGCCCCACCAG | + |
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Preference number: 3 (lower is better) Translates to: SVRTVTVGSRLT*SCGTRHSTPHQ Trigger: CTGGTGGGGCGTGCTGTGCCTGGTCCCACAACTGCATGTGAGCCTTGATCCTACTGTAACAGTTCTAACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR CCA 72 bp | GTTGCAAAGCTTTCAGGAGGCTGGGTGGCAGCAGACTaGGTCCTCTTTCAGTACAGGGAAGGCTCATTTCCT | + |
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Preference number: 3 (lower is better) Translates to: VAKLSGGWVAAD*VLFQYREGSFP Trigger: AGGAAATGAGCCTTCCCTGTACTGAAAGAGGACCCAGTCTGCTGCCACCCAGCCTCCTGAAAGCTTTGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR CCA 72 bp | TCTTCTATACCACACCCTGACATCTGCATTAACTCCTaGGGGTGGTCCCCAGACTCTGATGCCAGGGCTTTT | + |
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Preference number: 3 (lower is better) Translates to: SSIPHPDICINS*GWSPDSDARAF Trigger: AAAAGCCCTGGCATCAGAGTCTGGGGACCACCCCCAGGAGTTAATGCAGATGTCAGGGTGTGGTATAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR GCA 72 bp | GGTATGCTTGACTCTTCTATACCACACCCTGACATCTaGATTAACTCCTGGGGGTGGTCCCCAGACTCTGAT | + |
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Preference number: 3 (lower is better) Translates to: GMLDSSIPHPDI*INSWGWSPDSD Trigger: ATCAGAGTCTGGGGACCACCCCCAGGAGTTAATGCAGATGTCAGGGTGTGGTATAGAAGAGTCAAGCATACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR GCA 72 bp | ATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTaGCAGCTCATCATTGGGCAGGCACTGACCGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: ITKCHSSQTAQC*QLIIGQALTVF Trigger: GAAGACGGTCAGTGCCTGCCCAATGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR-3UTR CAA 90 bp | TTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCATCATTGATGAGTGCCAGCTCTaGAGAGGCCTCCTGCTCTCC | + |
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Preference number: 3 (lower is better) Translates to: FITKCHSSQTAQCCQLIIDECQL*RGLLLS Trigger: GGAGAGCAGGAGGCCTCTCAAGAGCTGGCACTCATC...AATGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR GCA 72 bp | TTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTaGTGCCAGCTCATCATTGGGCAGGCACTGACCGTC | + |
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Preference number: 3 (lower is better) Translates to: FITKCHSSQTAQ*CQLIIGQALTV Trigger: GACGGTCAGTGCCTGCCCAATGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR-3UTR CAA 90 bp | TTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCATCATTCAGACTCCACAGGAGTaGCAAAGCTTTCAGGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: FITKCHSSQTAQCCQLIIQTPQE*QSFQEA Trigger: AGCCTCCTGAAAGCTTTGCAACTCCTGTGGAGTCTG...AATGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | GGAGGCTGGGTGGCAGCAGACTGGGTCCTCTTTCAGTACAGGGAAGGCTCATTTCTCAGGCCCCGCTGGTaGCAGCGCCGGAGCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGWVAADWVLFQYREGSFLRPRW*QRRSRW Trigger: CCACCTGCTCCGGCGCTGGCACCAGCGGGGCCTGAG...AAATGAGCCTTCCCTGTACTGAAAGAGGACCCAGTCTGCTGCCACCCAGCCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CTGCCAGCTCATCATTGGGCAGGCACTGACCGTCTTCCACACCCACCCCAGTGGGGCCTTGCGGCTGGGTaGATCTGGTGGCGTAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LPAHHWAGTDRLPHPPQWGLAAG*IWWRSA Trigger: AGCACTACGCCACCAGATGCACCCAGCCGCAAGGCC...CCACTGGGGTGGGTGTGGAAGACGGTCAGTGCCTGCCCAATGATGAGCTGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | GGAGGCTGGGTGGCAGCAGACTGGGTCCTCTTTCAGTACAGGGAAGGCTCATTTTGGCCCACCTGCGCGTaGAGCTGCTCTTCAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GGWVAADWVLFQYREGSFWPTCA*SCSSGS Trigger: GCTGCCTGAAGAGCAGCTGCACGCGCAGGTGGGCCA...AAATGAGCCTTCCCTGTACTGAAAGAGGACCCAGTCTGCTGCCACCCAGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CCACCAGCAGGTCAGTTCTTTAGACTGCAGCAGCAAGCAGGGCAAGCAGCAGGAAGTGTCTGGTTGTGGTaGAGGCGGGGCCCACTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PPAGQFFRLQQQAGQAAGSVWLW*RRGPLA Trigger: GGCCAGTGGGCCCCGCCTGCACCACAACCAGACACT...TCCTGCTGCTTGCCCTGCTTGCTGCTGCAGTCTAAAGAACTGACCTGCTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CTGCCAGCTCATCATTGGGCAGGCACTGACCGTCTTCCACACCCACCCCAGTGGGAGCCAGCCTTGAGTTaGAAGCCCATGGGGTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: LPAHHWAGTDRLPHPPQWEPALS*KPMGLH Trigger: GTGCAACCCCATGGGCTTGCAACTCAAGGCTGGCTC...CCACTGGGGTGGGTGTGGAAGACGGTCAGTGCCTGCCCAATGATGAGCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | CTATACCACACCCTGACATCTGCATTAACTCCTGGGGGTGGTCCCCAGACTCTGGCAGGCGGGGCCCACTaGCCAGGCACACAAAGACGC | + |
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Preference number: 4 (lower is better) Translates to: LYHTLTSALTPGGGPQTLAGGAH*PGTQRR Trigger: GCGTCTTTGTGTGCCTGGCCAGTGGGCCCCGCCTGC...CAGAGTCTGGGGACCACCCCCAGGAGTTAATGCAGATGTCAGGGTGTGGTATAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR TCA 90 bp | GGAGGCTGGGTGGCAGCAGACTGGGTCCTCTTTCAGTACAGGGAAGGCTCATTTGCCCGTGGAACTGGCTaGTTCAGAGCCAGCCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: GGWVAADWVLFQYREGSFARGTG*FRASLE Trigger: CTCAAGGCTGGCTCTGAATCAGCCAGTTCCACGGGC...AAATGAGCCTTCCCTGTACTGAAAGAGGACCCAGTCTGCTGCCACCCAGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CAGTTCTTTAGACTGCAGCAGCAAGCAGGGCAAGCAGCAGGAGATCTCAGGCAGGCAGGTGGTAGAGGCTaGAGTCACAGGGCAGCGGGT | + |
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Preference number: 4 (lower is better) Translates to: QFFRLQQQAGQAAGDLRQAGGRG*SHRAAG Trigger: ACCCGCTGCCCTGTGACTGCAGCCTCTACCACCTGC...CTGCCTGAGATCTCCTGCTGCTTGCCCTGCTTGCTGCTGCAGTCTAAAGAACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CAGTTCTTTAGACTGCAGCAGCAAGCAGGGCAAGCAGCAGGAGATCTCAGGCAGTCAGCTACTGCGAGCTaGACACGGCCATTGAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: QFFRLQQQAGQAAGDLRQSATAS*TRPLRP Trigger: GGGCCTCAATGGCCGTGTGCAGCTCGCAGTAGCTGA...CTGCCTGAGATCTCCTGCTGCTTGCCCTGCTTGCTGCTGCAGTCTAAAGAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | CTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTTTTCGCACTCAGGCCCCGCTaGTGCCAGCGCCGGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LLLSKDKSPRLVTYLCFFALRPR*CQRRSR Trigger: CCTGCTCCGGCGCTGGCACCAGCGGGGCCTGAGTGC...GAAAAAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | GAAGGCTCATTTCCTCCTTCCATCTCAGAGTGGAAGCTGGATCTTCTGAGCTGCGCTCAGCTCCTGGAGTaGACTGGATGCCCGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: EGSFPPSISEWKLDLLSCAQLLE*TGCPGP Trigger: TGGCCCCGGGCATCCAGTCCACTCCAGGAGCTGAGC...GCAGCTCAGAAGATCCAGCTTCCACTCTGAGATGGAAGGAGGAAATGAGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CCACCAGCAGGTCAGTTCTTTAGACTGCAGCAGCAAGCAGGGCAAGCAGCAGGAGCTGCTCTTGCACCCTaGCTATGGCTAAGCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PPAGQFFRLQQQAGQAAGAALAP*LWLSCH Trigger: ATGGCAGCTTAGCCATAGGCAGGGTGCAAGAGCAGC...TCCTGCTGCTTGCCCTGCTTGCTGCTGCAGTCTAAAGAACTGACCTGCTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | ATACCACACCCTGACATCTGCATTAACTCCTGGGGGTGGTCCCCAGACTCTGATAGCATGCGCAGGCCCTaGAAGGCATCCAGGTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: IPHPDICINSWGWSPDSDSMRRP*KASRSK Trigger: CTTGGACCTGGATGCCTTCCAGGGCCTGCGCATGCT...ATCAGAGTCTGGGGACCACCCCCAGGAGTTAATGCAGATGTCAGGGTGTGGTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | CTGCCAGCTCATCATTGGGCAGGCACTGACCGTCTTCCACACCCACCCCAGTGGGTTCTTGAGATAAGTTaGCAGTGCAGCCAACTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LPAHHWAGTDRLPHPPQWVLEIS*QCSQLR Trigger: CCTGAGTTGGCTGCACTGCCAACTTATCTCAAGAAC...CCACTGGGGTGGGTGTGGAAGACGGTCAGTGCCTGCCCAATGATGAGCTGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | AGGCCTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTAAGAGCCTCAGGGACTaGCCCACCTGCGCGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RPPALQRQESQVSHLSMLKSLRD*PTCACS Trigger: GCTGCACGCGCAGGTGGGCCAGTCCCTGAGGCTCTT...AAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | AGGCCTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTCCCAGGCCACCCGAGTaGCAGGCACACTGGTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RPPALQRQESQVSHLSMLPRPPE*QAHWCC Trigger: GCAACACCAGTGTGCCTGCCACTCGGGTGGCCTGGG...AAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | CCACCAGCAGGTCAGTTCTTTAGACTGCAGCAGCAAGCAGGGCAAGCAGCAGGATTGTACTCAAGTGTCTaGTTGTGGTGCAGGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: PPAGQFFRLQQQAGQAAGLYSSV*LWCRRG Trigger: GCCCCGCCTGCACCACAACCAGACACTTGAGTACAA...TCCTGCTGCTTGCCCTGCTTGCTGCTGCAGTCTAAAGAACTGACCTGCTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR CAA 72 bp | CCTGTAGGTGTGTATGCCCACCAGACTCCACAGGAGTaGCAAAGCTTTCAGGAGGCTGGGTGGCAGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: PVGVYAHQTPQE*QSFQEAGWQQT Trigger: AGTCTGCTGCCACCCAGCCTCCTGAAAGCTTTGCAACTCCTGTGGAGTCTGGTGGGCATACACACCTACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | CTATACCACACCCTGACATCTGCATTAACTCCTGGGGGTGGTCCCCAGACTCTGAAGACCACATGCTTGTaGACACTGGCCTTGCGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LYHTLTSALTPGGGPQTLKTTCL*TLALRL Trigger: CAGCCGCAAGGCCAGTGTCCACAAGCATGTGGTCTT...CAGAGTCTGGGGACCACCCCCAGGAGTTAATGCAGATGTCAGGGTGTGGTATAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | ATACCACACCCTGACATCTGCATTAACTCCTGGGGGTGGTCCCCAGACTCTGATCTGAGCCCGTGGAACTaGCTGATTCAGAGCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: IPHPDICINSWGWSPDSDLSPWN*LIQSQP Trigger: AGGCTGGCTCTGAATCAGCCAGTTCCACGGGCTCAG...ATCAGAGTCTGGGGACCACCCCCAGGAGTTAATGCAGATGTCAGGGTGTGGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR TCA 90 bp | GGAGGCTGGGTGGCAGCAGACTGGGTCCTCTTTCAGTACAGGGAAGGCTCATTTGGTAGAGCCTGTTCTTaGGATAAGTTGGCAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGWVAADWVLFQYREGSFGRACS*DKLAVQ Trigger: CTGCACTGCCAACTTATCTCAAGAACAGGCTCTACC...AAATGAGCCTTCCCTGTACTGAAAGAGGACCCAGTCTGCTGCCACCCAGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR TCA 90 bp | CTATACCACACCCTGACATCTGCATTAACTCCTGGGGGTGGTCCCCAGACTCTGGACCGTGCAAGTGGTTaGAAGAGAAAGAGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LYHTLTSALTPGGGPQTLDRASG*KRKRRA Trigger: AGCTCTCCTCTTTCTCTTTCAACCACTTGCACGGTC...CAGAGTCTGGGGACCACCCCCAGGAGTTAATGCAGATGTCAGGGTGTGGTATAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | GGCCTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTTTCGCGTTCAAAATCATaGAGGGCACTCAGGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLLSKDKSPRLVTYLCFSRSKS*RALRPR Trigger: GCGGGGCCTGAGTGCCCTGCATGATTTTGAACGCGA...AAAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | TCATTTCCTCCTTCCATCTCAGAGTGGAAGCTGGATCTTCTGAGCTGCCAGTTCCATGCTTGTGGACACTaGCCTTGCGGCTGGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFPPSISEWKLDLLSCQFHACGH*PCGWVH Trigger: ATGCACCCAGCCGCAAGGCCAGTGTCCACAAGCATG...GAACTGGCAGCTCAGAAGATCCAGCTTCCACTCTGAGATGGAAGGAGGAAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| 3UTR CAA 72 bp | AGTTCCCTCCGGGCAGGGAGGGGAAGTGTGGTATGCTaGACTCTTCTATACCACACCCTGACATCTGCATTA | + |
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Preference number: 4 (lower is better) Translates to: SSLRAGRGSVVC*TLLYHTLTSAL Trigger: TAATGCAGATGTCAGGGTGTGGTATAGAAGAGTCAAGCATACCACACTTCCCCTCCCTGCCCGGAGGGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CCACTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCACTGGAGTGGACTGGATaGCCGGGGCCAGCAACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLLLQNVIAVRQHSAASSLEWTG*PGPATV Trigger: AACCGTTGCTGGCCCCGGGCATCCAGTCCACTCCAG...TGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTTTTCTGTGGACACTGGCCTTaGGGCTGGGTGCATCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSKDKSPRLVTYLCFFCGHWP*GWVHLV Trigger: CACCAGATGCACCCAGCCGCAAGGCCAGTGTCCACA...GAAAAAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | AGGCCTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTTCCAGGAAGACCACATaGTTGTGGACACTGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPPALQRQESQVSHLSMLSRKTT*LWTLAL Trigger: CAAGGCCAGTGTCCACAAGCATGTGGTCTTCCTGGA...AAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | CCTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTTTTGAGTGGCAGGCACACTaGTGTTGCAGAAGAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPALQRQESQVSHLSMLFEWQAH*CCRRAS Trigger: TGAGGCTCTTCTGCAACACCAGTGTGCCTGCCACTC...AAAAAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | CTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCATCATCAAGTGTCTGGTTGTaGTGCAGGCGGGGCCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQNVIAVRQHSAASSSSSVWL*CRRGPL Trigger: CAGTGGGCCCCGCCTGCACCACAACCAGACACTTGA...TGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CAGTTCTTTAGACTGCAGCAGCAAGCAGGGCAAGCAGCAGGAGATCTCAGGCAGATCCAGCACCCAACATaGATAGTAGTATACCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: QFFRLQQQAGQAAGDLRQIQHPT*IVVYLI Trigger: TATCAGGTATACTACTATGCATGTTGGGTGCTGGAT...CTGCCTGAGATCTCCTGCTGCTTGCCCTGCTTGCTGCTGCAGTCTAAAGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | CCACTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCAATATCGGGGCAGTTGTaGGGAGCAGGAGGCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PLLLQNVIAVRQHSAASSISGQL*GAGGRT Trigger: TGTTCTGCCTCCTGCTCCCCACAACTGCCCCGATAT...TGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | AGGCCTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTCAGCCAACTCAGGGATaGAGATATGTTTCAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPPALQRQESQVSHLSMLQPTQG*RYVSAS Trigger: ACTGGCTGAAACATATCTCCATCCCTGAGTTGGCTG...AAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | CCACTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCACTTGCACCCTGCCTATaGCTAAGCTGCCATCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLLQNVIAVRQHSAASSLAPCL*LSCHQP Trigger: TGGCTGATGGCAGCTTAGCCATAGGCAGGGTGCAAG...TGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR TCA 90 bp | CTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCATCAATTCAGAGCCAGCCTTaGGTTGCAAGCCCATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLQNVIAVRQHSAASSSIQSQP*VASPWG Trigger: ACCCCATGGGCTTGCAACTCAAGGCTGGCTCTGAAT...TGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCATCACCTCCAAGTCTGAAGTaGCCAATCCAGCACCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQNVIAVRQHSAASSSPPSLK*PIQHPT Trigger: TGTTGGGTGCTGGATTGGGCACTTCAGACTTGGAGG...TGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCATCAGCCACGACAGGGTGGTaGAAACAAGTAGAGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQNVIAVRQHSAASSSATTGW*KQVEQH Trigger: GTGTTGCTCTACTTGTTTGCACCACCCTGTCGTGGC...TGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCATCACATCGGCAGCACAGATaGATATATCGGGGCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLQNVIAVRQHSAASSSHRQHR*IYRGSC Trigger: ACAACTGCCCCGATATATGCATCTGTGCTGCCGATG...TGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR GCA 90 bp | CTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTTTTCGTTAACCCCAGACCGTaGAAGTGGTTGAAAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLSKDKSPRLVTYLCFFVNPRP*KWLKEK Trigger: TTTCTCTTTCAACCACTTGCACGGTCTGGGGTTAAC...GAAAAAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR TCA 90 bp | CTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTTTTCGCATCAGGCTGTTATTaGACAGAAGTAACTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLSKDKSPRLVTYLCFFASGCY*TEVTSP Trigger: TGGAGAAGTTACTTCTGTTCAATAACAGCCTGATGC...GAAAAAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | TTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCATCATTTATGTTTCAGCCAGTTaGAGGAGAGGTCCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FITKCHSSQTAQCCQLIIYVSAS*RRGPES Trigger: GGACTCTGGACCTCTCCTCCAACTGGCTGAAACATA...AATGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CCA 90 bp | CTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCATCATCCAGGTCATGGGTATaGAGCATCCTTAACATATTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQNVIAVRQHSAASSSSRSWV*SILNIL Trigger: TAATATGTTAAGGATGCTCCATACCCATGACCTGGA...TGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | CGCTCAGCTCCTGGAGTGGACTGGATGCCCGGGGCCAGCAACGGTTaGGGCAGGCCCGCTGACAGCAGTGACAGCAGCCACGACAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: RSAPGVDWMPGASNG*GRPADSSDSSHDRV Trigger: CACCCTGTCGTGGCTGCTGTCACTGCTGTCAGCGGGCCTGCCGCAACCGTTGCTGGCCCCGGGCATCCAGTCCACTCCAGGAGCTGAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | CACTCAGGCCCCGCTGGTGCCAGCGCCGGAGCAGGTGGTAGAGGCTaGAGTCACAGGGCAGCGGGTTGTTGTGCAGGTAGAGCCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSGPAGASAGAGGRG*SHRAAGCCAGRACS Trigger: AGAACAGGCTCTACCTGCACAACAACCCGCTGCCCTGTGACTGCAGCCTCTACCACCTGCTCCGGCGCTGGCACCAGCGGGGCCTGAGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | GCGGCTGGGTGCATCTGGTGGCGTAGTGCTAAGCATGGAGGACTGTaGGCTCAGCTCCTGGAGTGGACTGGATGCCCGGGGCCAGCAACG | + |
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Preference number: 5 (lower is better) Translates to: AAGCIWWRSAKHGGL*AQLLEWTGCPGPAT Trigger: CGTTGCTGGCCCCGGGCATCCAGTCCACTCCAGGAGCTGAGCGCACAGTCCTCCATGCTTAGCACTACGCCACCAGATGCACCCAGCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | GCTCATTCTTCGGGGAGACCCAGGCCACCCGAGTGGCAGGCACACTaGTGTTGCAGAAGAGCCTCAGGGACTGGCCCACCTGCGCGTGCA | + |
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Preference number: 5 (lower is better) Translates to: AHSSGRPRPPEWQAH*CCRRASGTGPPARA Trigger: TGCACGCGCAGGTGGGCCAGTCCCTGAGGCTCTTCTGCAACACCAGTGTGCCTGCCACTCGGGTGGCCTGGGTCTCCCCGAAGAATGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | TCTGGTGGCGTAGTGCTAAGCATGGAGGACTGTGCGCTCAGCTCCTaGAGTGGACTGGATGCCCGGGGCCAGCAACGGTTGCGGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SGGVVLSMEDCALSS*SGLDARGQQRLRQA Trigger: GGCCTGCCGCAACCGTTGCTGGCCCCGGGCATCCAGTCCACTCCAGGAGCTGAGCGCACAGTCCTCCATGCTTAGCACTACGCCACCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | GCGCCACAAGCAGCTCATTCTTCGGGGAGACCCAGGCCACCCGAGTaGCAGGCACACTGGTGTTGCAGAAGAGCCTCAGGGACTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: APQAAHSSGRPRPPE*QAHWCCRRASGTGP Trigger: TGGGCCAGTCCCTGAGGCTCTTCTGCAACACCAGTGTGCCTGCCACTCGGGTGGCCTGGGTCTCCCCGAAGAATGAGCTGCTTGTGGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | AGGTGCAAGGCACGCAGCCGGGAGAGGGGCGCTAACCACCCCGGGTaGAGGCGTTTGAGTGCGTTGTGGCTCAAATCGAGTTCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RCKARSRERGANHPG*RRLSALWLKSSSAA Trigger: TGCTGCAGAACTCGATTTGAGCCACAACGCACTCAAACGCCTGCACCCGGGGTGGTTAGCGCCCCTCTCCCGGCTGCGTGCCTTGCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | GCAGGCACACTGGTGTTGCAGAAGAGCCTCAGGGACTGGCCCACCTaGGCGTGCAGCTGCTCTTCAGGCAGCTCTAAGCCTGGAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGTLVLQKSLRDWPT*ACSCSSGSSKPGAA Trigger: TGCAGCTCCAGGCTTAGAGCTGCCTGAAGAGCAGCTGCACGCGCAGGTGGGCCAGTCCCTGAGGCTCTTCTGCAACACCAGTGTGCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | CGGGGCCCACTGGCCAGGCACACAAAGACGCCTGCGTGCTGCTCTTaGACCCTGCCTATGGCTAAGCTGCCATCAGCCAACACAGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: RGPLARHTKTPACCS*TLPMAKLPSANTAM Trigger: CATCGCTGTGTTGGCTGATGGCAGCTTAGCCATAGGCAGGGTGCAAGAGCAGCACGCAGGCGTCTTTGTGTGCCTGGCCAGTGGGCCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | GCGGCAGGCCCGCTGACAGCAGTGACAGCAGCCACGACAGGGTGGTaGAAACAAGTAGAGCAACACCAGCACCAGGCCCACAATACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAGPLTAVTAATTGW*KQVEQHQHQAHNTA Trigger: GGCTGTATTGTGGGCCTGGTGCTGGTGTTGCTCTACTTGTTTGCACCACCCTGTCGTGGCTGCTGTCACTGCTGTCAGCGGGCCTGCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | ACACGGCCATTGAGGCCCTTCTTGCCCGGCTCCAGGAAGACCACATaGTTGTGGACACTGGCCTTGCGGCTGGGTGCATCTGGTGGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: TRPLRPFLPGSRKTT*LWTLALRLGASGGV Trigger: TACGCCACCAGATGCACCCAGCCGCAAGGCCAGTGTCCACAAGCATGTGGTCTTCCTGGAGCCGGGCAAGAAGGGCCTCAATGGCCGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | GAGAGGGGCGCTAACCACCCCGGGTGCAGGCGTTTGAGTGCGTTGTaGCTCAAATCGAGTTCTGCAGCAGTGGTAGGCAGTGCTACCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ERGANHPGCRRLSAL*LKSSSAAVVGSATG Trigger: GCCGGTAGCACTGCCTACCACTGCTGCAGAACTCGATTTGAGCCACAACGCACTCAAACGCCTGCACCCGGGGTGGTTAGCGCCCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | TCACATTGTACTCAAGTGTCTGGTTGTGGTGCAGGCGGGGCCCACTaGCCAGGCACACAAAGACGCCTGCGTGCTGCTCTTGCACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SHCTQVSGCGAGGAH*PGTQRRLRAALAPC Trigger: GCAGGGTGCAAGAGCAGCACGCAGGCGTCTTTGTGTGCCTGGCCAGTGGGCCCCGCCTGCACCACAACCAGACACTTGAGTACAATGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | GGGCGAGCCTTTTGCACACTCACATTGTACTCAAGTGTCTGGTTGTaGTGCAGGCGGGGCCCACTGGCCAGGCACACAAAGACGCCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: GRAFCTLTLYSSVWL*CRRGPLARHTKTPA Trigger: CGCAGGCGTCTTTGTGTGCCTGGCCAGTGGGCCCCGCCTGCACCACAACCAGACACTTGAGTACAATGTGAGTGTGCAAAAGGCTCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | CCATTGAGGCCCTTCTTGCCCGGCTCCAGGAAGACCACATGCTTGTaGACACTGGCCTTGCGGCTGGGTGCATCTGGTGGCGTAGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PLRPFLPGSRKTTCL*TLALRLGASGGVVL Trigger: TAGCACTACGCCACCAGATGCACCCAGCCGCAAGGCCAGTGTCCACAAGCATGTGGTCTTCCTGGAGCCGGGCAAGAAGGGCCTCAATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | CAAAGACGCCTGCGTGCTGCTCTTGCACCCTGCCTATGGCTAAGCTaGCATCAGCCAACACAGCGATGCTACCATCCTGAGAGGCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QRRLRAALAPCLWLS*HQPTQRCYHPERLA Trigger: CGCCAGCCTCTCAGGATGGTAGCATCGCTGTGTTGGCTGATGGCAGCTTAGCCATAGGCAGGGTGCAAGAGCAGCACGCAGGCGTCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | CGAGCCTTTTGCACACTCACATTGTACTCAAGTGTCTGGTTGTGGTaGAGGCGGGGCCCACTGGCCAGGCACACAAAGACGCCTGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RAFCTLTLYSSVWLW*RRGPLARHTKTPAC Trigger: GCACGCAGGCGTCTTTGTGTGCCTGGCCAGTGGGCCCCGCCTGCACCACAACCAGACACTTGAGTACAATGTGAGTGTGCAAAAGGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | CTCCAGGAAGACCACATGCTTGTGGACACTGGCCTTGCGGCTGGGTaGATCTGGTGGCGTAGTGCTAAGCATGGAGGACTGTGCGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LQEDHMLVDTGLAAG*IWWRSAKHGGLCAQ Trigger: CTGAGCGCACAGTCCTCCATGCTTAGCACTACGCCACCAGATGCACCCAGCCGCAAGGCCAGTGTCCACAAGCATGTGGTCTTCCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | AAGCCCATGGGGTTGCACAGATCGAAGTCTTCAGCTACTGCGAGCTaGACACGGCCATTGAGGCCCTTCTTGCCCGGCTCCAGGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: KPMGLHRSKSSATAS*TRPLRPFLPGSRKT Trigger: GGTCTTCCTGGAGCCGGGCAAGAAGGGCCTCAATGGCCGTGTGCAGCTCGCAGTAGCTGAAGACTTCGATCTGTGCAACCCCATGGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | GAGTTGCAAGCCCATGGGGTTGCACAGATCGAAGTCTTCAGCTACTaGGAGCTGCACACGGCCATTGAGGCCCTTCTTGCCCGGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ELQAHGVAQIEVFSY*ELHTAIEALLARLQ Trigger: CTGGAGCCGGGCAAGAAGGGCCTCAATGGCCGTGTGCAGCTCGCAGTAGCTGAAGACTTCGATCTGTGCAACCCCATGGGCTTGCAACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | GTTGCGGCAGGCCCGCTGACAGCAGTGACAGCAGCCACGACAGGGTaGTGCAAACAAGTAGAGCAACACCAGCACCAGGCCCACAATACA | + |
|
Preference number: 5 (lower is better) Translates to: VAAGPLTAVTAATTG*CKQVEQHQHQAHNT Trigger: TGTATTGTGGGCCTGGTGCTGGTGTTGCTCTACTTGTTTGCACCACCCTGTCGTGGCTGCTGTCACTGCTGTCAGCGGGCCTGCCGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | GAAGACCACATGCTTGTGGACACTGGCCTTGCGGCTGGGTGCATCTaGTGGCGTAGTGCTAAGCATGGAGGACTGTGCGCTCAGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EDHMLVDTGLAAGCI*WRSAKHGGLCAQLL Trigger: CAGGAGCTGAGCGCACAGTCCTCCATGCTTAGCACTACGCCACCAGATGCACCCAGCCGCAAGGCCAGTGTCCACAAGCATGTGGTCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | TCTGACACCTTAAAGACCAAGCATGTGTACTCGCGTTCAAAATCATaGAGGGCACTCAGGCCCCGCTGGTGCCAGCGCCGGAGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SDTLKTKHVYSRSKS*RALRPRWCQRRSRW Trigger: CCACCTGCTCCGGCGCTGGCACCAGCGGGGCCTGAGTGCCCTGCATGATTTTGAACGCGAGTACACATGCTTGGTCTTTAAGGTGTCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | CACTGGCCAGGCACACAAAGACGCCTGCGTGCTGCTCTTGCACCCTaGCTATGGCTAAGCTGCCATCAGCCAACACAGCGATGCTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: HWPGTQRRLRAALAP*LWLSCHQPTQRCYH Trigger: ATGGTAGCATCGCTGTGTTGGCTGATGGCAGCTTAGCCATAGGCAGGGTGCAAGAGCAGCACGCAGGCGTCTTTGTGTGCCTGGCCAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | CCAGGCACACAAAGACGCCTGCGTGCTGCTCTTGCACCCTGCCTATaGCTAAGCTGCCATCAGCCAACACAGCGATGCTACCATCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGTQRRLRAALAPCL*LSCHQPTQRCYHPE Trigger: CTCAGGATGGTAGCATCGCTGTGTTGGCTGATGGCAGCTTAGCCATAGGCAGGGTGCAAGAGCAGCACGCAGGCGTCTTTGTGTGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CAA 90 bp | GGAGGCTGGGTGGCAGCAGACTGGGTCCTCTTTCAGTACAGGGAAGGCTCATTTGCAGGCACACTGGTGTaGCAGAAGAGCCTCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GGWVAADWVLFQYREGSFAGTLV*QKSLRD Trigger: GTCCCTGAGGCTCTTCTGCAACACCAGTGTGCCTGC...AAATGAGCCTTCCCTGTACTGAAAGAGGACCCAGTCTGCTGCCACCCAGCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS TCA 90 bp | TGCACAGATCGAAGTCTTCAGCTACTGCGAGCTGCACACGGCCATTaGGGCCCTTCTTGCCCGGCTCCAGGAAGACCACATGCTTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CTDRSLQLLRAAHGH*GPSCPAPGRPHACG Trigger: TCCACAAGCATGTGGTCTTCCTGGAGCCGGGCAAGAAGGGCCTCAATGGCCGTGTGCAGCTCGCAGTAGCTGAAGACTTCGATCTGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | CTTGCACCCTGCCTATGGCTAAGCTGCCATCAGCCAACACAGCGATaGTACCATCCTGAGAGGCTGGCGCCACAAGCAGCTCATTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LAPCLWLSCHQPTQR*YHPERLAPQAAHSS Trigger: CGAAGAATGAGCTGCTTGTGGCGCCAGCCTCTCAGGATGGTAGCATCGCTGTGTTGGCTGATGGCAGCTTAGCCATAGGCAGGGTGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | CCCTCTGAGCCCGTGGAACTGGCTGATTCAGAGCCAGCCTTGAGTTaGAAGCCCATGGGGTTGCACAGATCGAAGTCTTCAGCTACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PSEPVELADSEPALS*KPMGLHRSKSSATA Trigger: CGCAGTAGCTGAAGACTTCGATCTGTGCAACCCCATGGGCTTGCAACTCAAGGCTGGCTCTGAATCAGCCAGTTCCACGGGCTCAGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | TTGGCAGTGCAGCCAACTCAGGGATGGAGATATGTTTCAGCCAGTTaGAGGAGAGGTCCAGAGTCCGCAGGCGGGTTAACCCCAGACCGT | + |
|
Preference number: 5 (lower is better) Translates to: LAVQPTQGWRYVSAS*RRGPESAGGLTPDR Trigger: ACGGTCTGGGGTTAACCCGCCTGCGGACTCTGGACCTCTCCTCCAACTGGCTGAAACATATCTCCATCCCTGAGTTGGCTGCACTGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS TCA 90 bp | CGAGACCCTCTGAGCCCGTGGAACTGGCTGATTCAGAGCCAGCCTTaGGTTGCAAGCCCATGGGGTTGCACAGATCGAAGTCTTCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RDPLSPWNWLIQSQP*VASPWGCTDRSLQL Trigger: TAGCTGAAGACTTCGATCTGTGCAACCCCATGGGCTTGCAACTCAAGGCTGGCTCTGAATCAGCCAGTTCCACGGGCTCAGAGGGTCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | TTGGAGGAGAGGTCCAGAGTCCGCAGGCGGGTTAACCCCAGACCGTaGAAGTGGTTGAAAGAGAAAGAGGAGAGCTCGTTGCAGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LEERSRVRRRVNPRP*KWLKEKEESSLQLR Trigger: TCTCAGCTGCAACGAGCTCTCCTCTTTCTCTTTCAACCACTTGCACGGTCTGGGGTTAACCCGCCTGCGGACTCTGGACCTCTCCTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CAA 90 bp | GAAGGCTCATTTCCTCCTTCCATCTCAGAGTGGAAGCTGGATCTTCTGAGCTGCTACTCAAGTGTCTGGTaGTGGTGCAGGCGGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGSFPPSISEWKLDLLSCYSSVW*WCRRGP Trigger: TGGGCCCCGCCTGCACCACAACCAGACACTTGAGTA...GCAGCTCAGAAGATCCAGCTTCCACTCTGAGATGGAAGGAGGAAATGAGCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS TCA 90 bp | GCAGGCCCTGGAAGGCATCCAGGTCCAAGTGCATCAGGCTGTTATTaGACAGAAGTAACTTCTCCAGCTCCTCCAGGCCATCCAGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AGPGRHPGPSASGCY*TEVTSPAPPGHPGH Trigger: ATGACCTGGATGGCCTGGAGGAGCTGGAGAAGTTACTTCTGTTCAATAACAGCCTGATGCACTTGGACCTGGATGCCTTCCAGGGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | AGGTGGCTAAGCATGCGCAGGCCCTGGAAGGCATCCAGGTCCAAGTaGATCAGGCTGTTATTGAACAGAAGTAACTTCTCCAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RWLSMRRPWKASRSK*IRLLLNRSNFSSSS Trigger: GGAGGAGCTGGAGAAGTTACTTCTGTTCAATAACAGCCTGATGCACTTGGACCTGGATGCCTTCCAGGGCCTGCGCATGCTTAGCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | GTGGTAAAGCCTGTGTTGAAAGTCTCTGGCTCGGGGCGAGCCTTTTaGACACTCACATTGTACTCAAGTGTCTGGTTGTGGTGCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VVKPVLKVSGSGRAF*TLTLYSSVWLWCRR Trigger: CCGCCTGCACCACAACCAGACACTTGAGTACAATGTGAGTGTGCAAAAGGCTCGCCCCGAGCCAGAGACTTTCAACACAGGCTTTACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | CAGCTCAACACATCGGCAGCACAGATGCATATATCGGGGCAGTTGTaGGGAGCAGGAGGCAGAACATCCTCCAAGTCTGAAGTGCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: QLNTSAAQMHISGQL*GAGGRTSSKSEVPN Trigger: ATTGGGCACTTCAGACTTGGAGGATGTTCTGCCTCCTGCTCCCCACAACTGCCCCGATATATGCATCTGTGCTGCCGATGTGTTGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CAA 90 bp | GTCTGTAATGTTAATGGGACATTTGGTCACTCTGTGGTCCTAGGGGAAGCAGGCCCCGGGTGCAGGCGTTaGAGTGCGTTGTGGCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VCNVNGTFGHSVVLGEAGPGCRR*SALWLK Trigger: TTTGAGCCACAACGCACTCAAACGCCTGCACCCGGG...GCCTGCTTCCCCTAGGACCACAGAGTGACCAAATGTCCCATTAACATTACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CAA 90 bp | GTCTGTAATGTTAATGGGACATTTGGTCACTCTGTGGTCCTAGGGGAAGCAGGCGATTCAGAGCCAGCCTaGAGTTGCAAGCCCATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VCNVNGTFGHSVVLGEAGDSEPA*SCKPMG Trigger: CCCCATGGGCTTGCAACTCAAGGCTGGCTCTGAATC...GCCTGCTTCCCCTAGGACCACAGAGTGACCAAATGTCCCATTAACATTACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS TCA 90 bp | TGCAGTCACAGGGCAGCGGGTTGTTGTGCAGGTAGAGCCTGTTCTTaGGATAAGTTGGCAGTGCAGCCAACTCAGGGATGGAGATATGTT | + |
|
Preference number: 5 (lower is better) Translates to: CSHRAAGCCAGRACS*DKLAVQPTQGWRYV Trigger: AACATATCTCCATCCCTGAGTTGGCTGCACTGCCAACTTATCTCAAGAACAGGCTCTACCTGCACAACAACCCGCTGCCCTGTGACTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | GGCAGTTGTGGGGAGCAGGAGGCAGAACATCCTCCAAGTCTGAAGTaGCCAATCCAGCACCCAACATGCATAGTAGTATACCTGATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSCGEQEAEHPPSLK*PIQHPTCIVVYLIA Trigger: TGCTATCAGGTATACTACTATGCATGTTGGGTGCTGGATTGGGCACTTCAGACTTGGAGGATGTTCTGCCTCCTGCTCCCCACAACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | GGGCAGCGGGTTGTTGTGCAGGTAGAGCCTGTTCTTGAGATAAGTTaGCAGTGCAGCCAACTCAGGGATGGAGATATGTTTCAGCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GQRVVVQVEPVLEIS*QCSQLRDGDMFQPV Trigger: AACTGGCTGAAACATATCTCCATCCCTGAGTTGGCTGCACTGCCAACTTATCTCAAGAACAGGCTCTACCTGCACAACAACCCGCTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | CACAATACAGCCCAGCAGGGTGGTAAAGCCTGTGTTGAAAGTCTCTaGCTCGGGGCGAGCCTTTTGCACACTCACATTGTACTCAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HNTAQQGGKACVESL*LGASLLHTHIVLKC Trigger: ACACTTGAGTACAATGTGAGTGTGCAAAAGGCTCGCCCCGAGCCAGAGACTTTCAACACAGGCTTTACCACCCTGCTGGGCTGTATTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CAA 90 bp | ATACCACACCCTGACATCTGCATTAACTCCTGGGGGTGGTCCCCAGACTCTGATAGACCGTGCAAGTGGTaGAAAGAGAAAGAGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: IPHPDICINSWGWSPDSDRPCKW*KEKEES Trigger: GCTCTCCTCTTTCTCTTTCAACCACTTGCACGGTCT...ATCAGAGTCTGGGGACCACCCCCAGGAGTTAATGCAGATGTCAGGGTGTGGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CAA 90 bp | CTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCATCAAGCTGCACACGGCCATaGAGGCCCTTCTTGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLQNVIAVRQHSAASSSSCTRP*RPFLPG Trigger: GCCGGGCAAGAAGGGCCTCAATGGCCGTGTGCAGCT...TGATGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 90 bp | CGGGTTGTTGTGCAGGTAGAGCCTGTTCTTGAGATAAGTTGGCAGTaGAGCCAACTCAGGGATGGAGATATGTTTCAGCCAGTTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RVVVQVEPVLEISWQ*SQLRDGDMFQPVGG Trigger: TCCTCCAACTGGCTGAAACATATCTCCATCCCTGAGTTGGCTGCACTGCCAACTTATCTCAAGAACAGGCTCTACCTGCACAACAACCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CAA 90 bp | CCACTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCATTGTGGACACTGGCCTaGCGGCTGGGTGCATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLLLQNVIAVRQHSAASSLWTLA*RLGASG Trigger: ACCAGATGCACCCAGCCGCAAGGCCAGTGTCCACAA...TGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CAA 90 bp | GGCCTCCTGCTCTCCAAAGACAAGAGTCCCAGGTTAGTCACCTATCTATGCTTTATATGTTTCAGCCAGTaGGAGGAGAGGTCCAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GLLLSKDKSPRLVTYLCFICFSQ*EERSRV Trigger: GACTCTGGACCTCTCCTCCAACTGGCTGAAACATAT...AAAGCATAGATAGGTGACTAACCTGGGACTCTTGTCTTTGGAGAGCAGGAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS-3UTR CAA 90 bp | CCACTTTTATTACAAAATGTCATAGCAGTCAGACAGCACAGTGCTGCCAGCTCAAGGAAGACCACATGCTaGTGGACACTGGCCTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLLQNVIAVRQHSAASSRKTTC*WTLALR Trigger: CCGCAAGGCCAGTGTCCACAAGCATGTGGTCTTCCT...TGAGCTGGCAGCACTGTGCTGTCTGACTGCTATGACATTTTGTAATAAAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 90 bp | TTGAACAGAAGTAACTTCTCCAGCTCCTCCAGGCCATCCAGGTCATaGGTATGGAGCATCCTTAACATATTAGAGGACAGGTCAAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LNRSNFSSSSRPSRS*VWSILNILEDRSSV Trigger: GACACTTGACCTGTCCTCTAATATGTTAAGGATGCTCCATACCCATGACCTGGATGGCCTGGAGGAGCTGGAGAAGTTACTTCTGTTCAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | GGAGGACTGTGCGCTCAGCTCCTGGAGTGGACTGGATaGCCGGGGCCAGCAACGGTTGCGGCAGGCCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGLCAQLLEWTG*PGPATVAAGPL Trigger: CAGCGGGCCTGCCGCAACCGTTGCTGGCCCCGGGCATCCAGTCCACTCCAGGAGCTGAGCGCACAGTCCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | CCTGGAGTGGACTGGATGCCCGGGGCCAGCAACGGTTaGGGCAGGCCCGCTGACAGCAGTGACAGCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGVDWMPGASNG*GRPADSSDSSH Trigger: GTGGCTGCTGTCACTGCTGTCAGCGGGCCTGCCGCAACCGTTGCTGGCCCCGGGCATCCAGTCCACTCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | TCGGGGAGACCCAGGCCACCCGAGTGGCAGGCACACTaGTGTTGCAGAAGAGCCTCAGGGACTGGCCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: SGRPRPPEWQAH*CCRRASGTGPP Trigger: AGGTGGGCCAGTCCCTGAGGCTCTTCTGCAACACCAGTGTGCCTGCCACTCGGGTGGCCTGGGTCTCCCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | GCACGCAGCCGGGAGAGGGGCGCTAACCACCCCGGGTaGAGGCGTTTGAGTGCGTTGTGGCTCAAATCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ARSRERGANHPG*RRLSALWLKSS Trigger: ACTCGATTTGAGCCACAACGCACTCAAACGCCTGCACCCGGGGTGGTTAGCGCCCCTCTCCCGGCTGCGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 90 bp | GCACGCAGCCGGGAGAGGGGCGCTAACCACCCCGGGTGCAGGCGTTaGAGTGCGTTGTGGCTCAAATCGAGTTCTGCAGCAGTGGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARSRERGANHPGCRR*SALWLKSSSAAVVG Trigger: GCCTACCACTGCTGCAGAACTCGATTTGAGCCACAACGCACTCAAACGCCTGCACCCGGGGTGGTTAGCGCCCCTCTCCCGGCTGCGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | CCCTTCTTGCCCGGCTCCAGGAAGACCACATGCTTGTaGACACTGGCCTTGCGGCTGGGTGCATCTGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PFLPGSRKTTCL*TLALRLGASGG Trigger: GCCACCAGATGCACCCAGCCGCAAGGCCAGTGTCCACAAGCATGTGGTCTTCCTGGAGCCGGGCAAGAAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 90 bp | CGGCCATTGAGGCCCTTCTTGCCCGGCTCCAGGAAGACCACATGCTaGTGGACACTGGCCTTGCGGCTGGGTGCATCTGGTGGCGTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: RPLRPFLPGSRKTTC*WTLALRLGASGGVV Trigger: CACTACGCCACCAGATGCACCCAGCCGCAAGGCCAGTGTCCACAAGCATGTGGTCTTCCTGGAGCCGGGCAAGAAGGGCCTCAATGGCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS TCA 72 bp | GGGAGAGGGGCGCTAACCACCCCGGGTGCAGGCGTTTaGGTGCGTTGTGGCTCAAATCGAGTTCTGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GRGALTTPGAGV*VRCGSNRVLQQ Trigger: CTGCTGCAGAACTCGATTTGAGCCACAACGCACTCAAACGCCTGCACCCGGGGTGGTTAGCGCCCCTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | CTGGTGTTGCAGAAGAGCCTCAGGGACTGGCCCACCTaGGCGTGCAGCTGCTCTTCAGGCAGCTCTAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LVLQKSLRDWPT*ACSCSSGSSKP Trigger: AGGCTTAGAGCTGCCTGAAGAGCAGCTGCACGCGCAGGTGGGCCAGTCCCTGAGGCTCTTCTGCAACACCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | TGCATCTGGTGGCGTAGTGCTAAGCATGGAGGACTGTaGGCTCAGCTCCTGGAGTGGACTGGATGCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CIWWRSAKHGGL*AQLLEWTGCPG Trigger: CCCCGGGCATCCAGTCCACTCCAGGAGCTGAGCGCACAGTCCTCCATGCTTAGCACTACGCCACCAGATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | ACTCAAGTGTCTGGTTGTGGTGCAGGCGGGGCCCACTaGCCAGGCACACAAAGACGCCTGCGTGCTGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: TQVSGCGAGGAH*PGTQRRLRAAL Trigger: AAGAGCAGCACGCAGGCGTCTTTGTGTGCCTGGCCAGTGGGCCCCGCCTGCACCACAACCAGACACTTGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | GGCCCGCTGACAGCAGTGACAGCAGCCACGACAGGGTaGTGCAAACAAGTAGAGCAACACCAGCACCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPLTAVTAATTG*CKQVEQHQHQA Trigger: GGCCTGGTGCTGGTGTTGCTCTACTTGTTTGCACCACCCTGTCGTGGCTGCTGTCACTGCTGTCAGCGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | GTAGTGCTAAGCATGGAGGACTGTGCGCTCAGCTCCTaGAGTGGACTGGATGCCCGGGGCCAGCAACGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VVLSMEDCALSS*SGLDARGQQRL Trigger: CAACCGTTGCTGGCCCCGGGCATCCAGTCCACTCCAGGAGCTGAGCGCACAGTCCTCCATGCTTAGCACTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 72 bp | CGGGAGAGGGGCGCTAACCACCCCGGGTGCAGGCGTTaGAGTGCGTTGTGGCTCAAATCGAGTTCTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RERGANHPGCRR*SALWLKSSSAA Trigger: TGCTGCAGAACTCGATTTGAGCCACAACGCACTCAAACGCCTGCACCCGGGGTGGTTAGCGCCCCTCTCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | CTGGCCAGGCACACAAAGACGCCTGCGTGCTGCTCTTaGACCCTGCCTATGGCTAAGCTGCCATCAGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LARHTKTPACCS*TLPMAKLPSAN Trigger: GTTGGCTGATGGCAGCTTAGCCATAGGCAGGGTGCAAGAGCAGCACGCAGGCGTCTTTGTGTGCCTGGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | GGGTTGCACAGATCGAAGTCTTCAGCTACTGCGAGCTaGACACGGCCATTGAGGCCCTTCTTGCCCGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLHRSKSSATAS*TRPLRPFLPGS Trigger: GGAGCCGGGCAAGAAGGGCCTCAATGGCCGTGTGCAGCTCGCAGTAGCTGAAGACTTCGATCTGTGCAACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 72 bp | GGCGCTAACCACCCCGGGTGCAGGCGTTTGAGTGCGTaGTGGCTCAAATCGAGTTCTGCAGCAGTGGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GANHPGCRRLSA*WLKSSSAAVVG Trigger: GCCTACCACTGCTGCAGAACTCGATTTGAGCCACAACGCACTCAAACGCCTGCACCCGGGGTGGTTAGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
||
| CDS TCA 72 bp | CGAAGTCTTCAGCTACTGCGAGCTGCACACGGCCATTaGGGCCCTTCTTGCCCGGCTCCAGGAAGACCACAT | + |
|
Preference number: 6 (lower is better) Translates to: RSLQLLRAAHGH*GPSCPAPGRPH Trigger: ATGTGGTCTTCCTGGAGCCGGGCAAGAAGGGCCTCAATGGCCGTGTGCAGCTCGCAGTAGCTGAAGACTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
||
| CDS GCA 72 bp | GACCACATGCTTGTGGACACTGGCCTTGCGGCTGGGTaGATCTGGTGGCGTAGTGCTAAGCATGGAGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: DHMLVDTGLAAG*IWWRSAKHGGL Trigger: CAGTCCTCCATGCTTAGCACTACGCCACCAGATGCACCCAGCCGCAAGGCCAGTGTCCACAAGCATGTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | GCCCATGGGGTTGCACAGATCGAAGTCTTCAGCTACTaGGAGCTGCACACGGCCATTGAGGCCCTTCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AHGVAQIEVFSY*ELHTAIEALLA Trigger: GGCAAGAAGGGCCTCAATGGCCGTGTGCAGCTCGCAGTAGCTGAAGACTTCGATCTGTGCAACCCCATGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
||
| CDS CCA 72 bp | CGAGCCTTTTGCACACTCACATTGTACTCAAGTGTCTaGTTGTGGTGCAGGCGGGGCCCACTGGCCAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RAFCTLTLYSSV*LWCRRGPLARH Trigger: GTGCCTGGCCAGTGGGCCCCGCCTGCACCACAACCAGACACTTGAGTACAATGTGAGTGTGCAAAAGGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 72 bp | TCGAAGTCTTCAGCTACTGCGAGCTGCACACGGCCATaGAGGCCCTTCTTGCCCGGCTCCAGGAAGACCACA | + |
|
Preference number: 6 (lower is better) Translates to: SKSSATASCTRP*RPFLPGSRKTT Trigger: TGTGGTCTTCCTGGAGCCGGGCAAGAAGGGCCTCAATGGCCGTGTGCAGCTCGCAGTAGCTGAAGACTTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 90 bp | GTTGGCAGTGCAGCCAACTCAGGGATGGAGATATGTTTCAGCCAGTaGGAGGAGAGGTCCAGAGTCCGCAGGCGGGTTAACCCCAGACCG | + |
|
Preference number: 6 (lower is better) Translates to: VGSAANSGMEICFSQ*EERSRVRRRVNPRP Trigger: CGGTCTGGGGTTAACCCGCCTGCGGACTCTGGACCTCTCCTCCAACTGGCTGAAACATATCTCCATCCCTGAGTTGGCTGCACTGCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 90 bp | TTGCACAGATCGAAGTCTTCAGCTACTGCGAGCTGCACACGGCCATaGAGGCCCTTCTTGCCCGGCTCCAGGAAGACCACATGCTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: LHRSKSSATASCTRP*RPFLPGSRKTTCLW Trigger: CCACAAGCATGTGGTCTTCCTGGAGCCGGGCAAGAAGGGCCTCAATGGCCGTGTGCAGCTCGCAGTAGCTGAAGACTTCGATCTGTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | TTAAAGACCAAGCATGTGTACTCGCGTTCAAAATCATaGAGGGCACTCAGGCCCCGCTGGTGCCAGCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: LKTKHVYSRSKS*RALRPRWCQRR Trigger: CCGGCGCTGGCACCAGCGGGGCCTGAGTGCCCTGCATGATTTTGAACGCGAGTACACATGCTTGGTCTTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | TGCCTATGGCTAAGCTGCCATCAGCCAACACAGCGATaGTACCATCCTGAGAGGCTGGCGCCACAAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: CLWLSCHQPTQR*YHPERLAPQAA Trigger: AGCTGCTTGTGGCGCCAGCCTCTCAGGATGGTAGCATCGCTGTGTTGGCTGATGGCAGCTTAGCCATAGGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | CTGCGTGCTGCTCTTGCACCCTGCCTATGGCTAAGCTaGCATCAGCCAACACAGCGATGCTACCATCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LRAALAPCLWLS*HQPTQRCYHPE Trigger: CTCAGGATGGTAGCATCGCTGTGTTGGCTGATGGCAGCTTAGCCATAGGCAGGGTGCAAGAGCAGCACGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | TGCACACTCACATTGTACTCAAGTGTCTGGTTGTGGTaGAGGCGGGGCCCACTGGCCAGGCACACAAAGACG | + |
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Preference number: 6 (lower is better) Translates to: CTLTLYSSVWLW*RRGPLARHTKT Trigger: CGTCTTTGTGTGCCTGGCCAGTGGGCCCCGCCTGCACCACAACCAGACACTTGAGTACAATGTGAGTGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | CAAAGACGCCTGCGTGCTGCTCTTGCACCCTGCCTATaGCTAAGCTGCCATCAGCCAACACAGCGATGCTAC | + |
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Preference number: 6 (lower is better) Translates to: QRRLRAALAPCL*LSCHQPTQRCY Trigger: GTAGCATCGCTGTGTTGGCTGATGGCAGCTTAGCCATAGGCAGGGTGCAAGAGCAGCACGCAGGCGTCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 72 bp | GCCTTTTGCACACTCACATTGTACTCAAGTGTCTGGTaGTGGTGCAGGCGGGGCCCACTGGCCAGGCACACA | + |
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Preference number: 6 (lower is better) Translates to: AFCTLTLYSSVW*WCRRGPLARHT Trigger: TGTGTGCCTGGCCAGTGGGCCCCGCCTGCACCACAACCAGACACTTGAGTACAATGTGAGTGTGCAAAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 90 bp | AGCACCAGGCCCACAATACAGCCCAGCAGGGTGGTAAAGCCTGTGTaGAAAGTCTCTGGCTCGGGGCGAGCCTTTTGCACACTCACATTG | + |
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Preference number: 6 (lower is better) Translates to: STRPTIQPSRVVKPV*KVSGSGRAFCTLTL Trigger: CAATGTGAGTGTGCAAAAGGCTCGCCCCGAGCCAGAGACTTTCAACACAGGCTTTACCACCCTGCTGGGCTGTATTGTGGGCCTGGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 90 bp | GAACTGGCTGATTCAGAGCCAGCCTTGAGTTGCAAGCCCATGGGGTaGCACAGATCGAAGTCTTCAGCTACTGCGAGCTGCACACGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ELADSEPALSCKPMG*HRSKSSATASCTRP Trigger: TGGCCGTGTGCAGCTCGCAGTAGCTGAAGACTTCGATCTGTGCAACCCCATGGGCTTGCAACTCAAGGCTGGCTCTGAATCAGCCAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 90 bp | ACGAGACCCTCTGAGCCCGTGGAACTGGCTGATTCAGAGCCAGCCTaGAGTTGCAAGCCCATGGGGTTGCACAGATCGAAGTCTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: TRPSEPVELADSEPA*SCKPMGLHRSKSSA Trigger: AGCTGAAGACTTCGATCTGTGCAACCCCATGGGCTTGCAACTCAAGGCTGGCTCTGAATCAGCCAGTTCCACGGGCTCAGAGGGTCTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | CAGCCAACTCAGGGATGGAGATATGTTTCAGCCAGTTaGAGGAGAGGTCCAGAGTCCGCAGGCGGGTTAACC | + |
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Preference number: 6 (lower is better) Translates to: QPTQGWRYVSAS*RRGPESAGGLT Trigger: GGTTAACCCGCCTGCGGACTCTGGACCTCTCCTCCAACTGGCTGAAACATATCTCCATCCCTGAGTTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 72 bp | CCCACAATACAGCCCAGCAGGGTGGTAAAGCCTGTGTaGAAAGTCTCTGGCTCGGGGCGAGCCTTTTGCACA | + |
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Preference number: 6 (lower is better) Translates to: PTIQPSRVVKPV*KVSGSGRAFCT Trigger: TGTGCAAAAGGCTCGCCCCGAGCCAGAGACTTTCAACACAGGCTTTACCACCCTGCTGGGCTGTATTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 90 bp | CGCAGGCCCTGGAAGGCATCCAGGTCCAAGTGCATCAGGCTGTTATaGAACAGAAGTAACTTCTCCAGCTCCTCCAGGCCATCCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RRPWKASRSKCIRLL*NRSNFSSSSRPSRS Trigger: TGACCTGGATGGCCTGGAGGAGCTGGAGAAGTTACTTCTGTTCAATAACAGCCTGATGCACTTGGACCTGGATGCCTTCCAGGGCCTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS TCA 72 bp | AGGGCAGCGGGTTGTTGTGCAGGTAGAGCCTGTTCTTaGGATAAGTTGGCAGTGCAGCCAACTCAGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: RAAGCCAGRACS*DKLAVQPTQGW Trigger: CCATCCCTGAGTTGGCTGCACTGCCAACTTATCTCAAGAACAGGCTCTACCTGCACAACAACCCGCTGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | CCCGTGGAACTGGCTGATTCAGAGCCAGCCTTGAGTTaGAAGCCCATGGGGTTGCACAGATCGAAGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PVELADSEPALS*KPMGLHRSKSS Trigger: TGAAGACTTCGATCTGTGCAACCCCATGGGCTTGCAACTCAAGGCTGGCTCTGAATCAGCCAGTTCCACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | TTTTGCACACTCACATTGTACTCAAGTGTCTGGTTGTaGTGCAGGCGGGGCCCACTGGCCAGGCACACAAAG | + |
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Preference number: 6 (lower is better) Translates to: FCTLTLYSSVWL*CRRGPLARHTK Trigger: CTTTGTGTGCCTGGCCAGTGGGCCCCGCCTGCACCACAACCAGACACTTGAGTACAATGTGAGTGTGCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | GCCCAGCAGGGTGGTAAAGCCTGTGTTGAAAGTCTCTaGCTCGGGGCGAGCCTTTTGCACACTCACATTGTA | + |
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Preference number: 6 (lower is better) Translates to: AQQGGKACVESL*LGASLLHTHIV Trigger: TACAATGTGAGTGTGCAAAAGGCTCGCCCCGAGCCAGAGACTTTCAACACAGGCTTTACCACCCTGCTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 72 bp | GATTCAGAGCCAGCCTTGAGTTGCAAGCCCATGGGGTaGCACAGATCGAAGTCTTCAGCTACTGCGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: DSEPALSCKPMG*HRSKSSATASC Trigger: GCAGCTCGCAGTAGCTGAAGACTTCGATCTGTGCAACCCCATGGGCTTGCAACTCAAGGCTGGCTCTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 90 bp | GGTGGTAAAGCCTGTGTTGAAAGTCTCTGGCTCGGGGCGAGCCTTTaGCACACTCACATTGTACTCAAGTGTCTGGTTGTGGTGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: GGKACVESLWLGASL*HTHIVLKCLVVVQA Trigger: CGCCTGCACCACAACCAGACACTTGAGTACAATGTGAGTGTGCAAAAGGCTCGCCCCGAGCCAGAGACTTTCAACACAGGCTTTACCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | GGGGAGCAGGAGGCAGAACATCCTCCAAGTCTGAAGTaGCCAATCCAGCACCCAACATGCATAGTAGTATAC | + |
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Preference number: 6 (lower is better) Translates to: GEQEAEHPPSLK*PIQHPTCIVVY Trigger: GTATACTACTATGCATGTTGGGTGCTGGATTGGGCACTTCAGACTTGGAGGATGTTCTGCCTCCTGCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | CCTGTGTTGAAAGTCTCTGGCTCGGGGCGAGCCTTTTaGACACTCACATTGTACTCAAGTGTCTGGTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: PVLKVSGSGRAF*TLTLYSSVWLW Trigger: CCACAACCAGACACTTGAGTACAATGTGAGTGTGCAAAAGGCTCGCCCCGAGCCAGAGACTTTCAACACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 72 bp | GCCTGTGTTGAAAGTCTCTGGCTCGGGGCGAGCCTTTaGCACACTCACATTGTACTCAAGTGTCTGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: ACVESLWLGASL*HTHIVLKCLVV Trigger: CACAACCAGACACTTGAGTACAATGTGAGTGTGCAAAAGGCTCGCCCCGAGCCAGAGACTTTCAACACAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | CCTCCAAGTCTGAAGTGCCCAATCCAGCACCCAACATaGATAGTAGTATACCTGATAGCACTAGCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PPSLKCPIQHPT*IVVYLIALARP Trigger: TGGCCTGGCTAGTGCTATCAGGTATACTACTATGCATGTTGGGTGCTGGATTGGGCACTTCAGACTTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CAA 72 bp | TGGAAGGCATCCAGGTCCAAGTGCATCAGGCTGTTATaGAACAGAAGTAACTTCTCCAGCTCCTCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: WKASRSKCIRLL*NRSNFSSSSRP Trigger: TGGCCTGGAGGAGCTGGAGAAGTTACTTCTGTTCAATAACAGCCTGATGCACTTGGACCTGGATGCCTTCCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS GCA 72 bp | GTGCAGGTAGAGCCTGTTCTTGAGATAAGTTGGCAGTaGAGCCAACTCAGGGATGGAGATATGTTTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VQVEPVLEISWQ*SQLRDGDMFQP Trigger: TGGCTGAAACATATCTCCATCCCTGAGTTGGCTGCACTGCCAACTTATCTCAAGAACAGGCTCTACCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | TTCTCCAGCTCCTCCAGGCCATCCAGGTCATGGGTATaGAGCATCCTTAACATATTAGAGGACAGGTCAAGT | + |
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Preference number: 6 (lower is better) Translates to: FSSSSRPSRSWV*SILNILEDRSS Trigger: ACTTGACCTGTCCTCTAATATGTTAAGGATGCTCCATACCCATGACCTGGATGGCCTGGAGGAGCTGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | AGTAACTTCTCCAGCTCCTCCAGGCCATCCAGGTCATaGGTATGGAGCATCCTTAACATATTAGAGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: SNFSSSSRPSRS*VWSILNILEDR Trigger: CCTGTCCTCTAATATGTTAAGGATGCTCCATACCCATGACCTGGATGGCCTGGAGGAGCTGGAGAAGTTACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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| CDS CCA 72 bp | GTTGTTGTGCAGGTAGAGCCTGTTCTTGAGATAAGTTaGCAGTGCAGCCAACTCAGGGATGGAGATATGTTT | + |
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Preference number: 6 (lower is better) Translates to: VVVQVEPVLEIS*QCSQLRDGDMF Trigger: AAACATATCTCCATCCCTGAGTTGGCTGCACTGCCAACTTATCTCAAGAACAGGCTCTACCTGCACAACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085060.3 |
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