Pregenerated sensors for AMIGO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048218Ensembl transcript IDs: ENSMUST00000053106.7, ENSMUST00000229890.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTACAGATACACAAGCAGACGGACAGCCGTGAGTCTGCTACGATaGAGGTTTAGGGAGTTACTCAGACATTTCGGTACTGACACATAT | + |
|
Preference number: 1 (lower is better) Translates to: FYRYTSRRTAVSLLR*RFRELLRHFGTDTY Trigger: ATATGTGTCAGTACCGAAATGTCTGAGTAACTCCCTAAACCTTCATCGTAGCAGACTCACGGCTGTCCGTCTGCTTGTGTATCTGTAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAAAATGGCTGGTCCTACTaGCTTCAAGGCAGCTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PVDVISLSFWSEMMILAENGWSY*LQGSFE Trigger: TTCAAAGCTGCCTTGAAGGCAGTAGGACCAGCCATT...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR CAA 90 bp | TTTGCACTACATGGGATGTGGCAGAACCCTGTGGATGTTATAAGTTaGTCATTCTGGTCTGAAATGATGATTTTGGCTGAAAAACCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: FALHGMWQNPVDVIS*SFWSEMMILAEKPL Trigger: TAGAGGTTTTTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGGGTTCTGCCACATCCCATGTAGTGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR TCA 72 bp | TGCTGTTACTCAAAACTCTCAAACTCAACCGTCTCCTaGCCCAGTCCAAGAAGCAACCAGTGTGCTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CCYSKLSNSTVS*PSPRSNQCALP Trigger: AGGCAGAGCACACTGGTTGCTTCTTGGACTGGGTCAGGAGACGGTTGAGTTTGAGAGTTTTGAGTAACAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR GCA 72 bp | AACCGTCTCCTGACCCAGTCCAAGAAGCAACCAGTGTaGTCTGCCTCACTTCCTAGCAACCATCTTAAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NRLLTQSKKQPV*SASLPSNHLKK Trigger: CTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCTTGGACTGGGTCAGGAGACGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAAGCCTTCAAGGCAGCTTaGAAATCCTCGGCGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PVDVISLSFWSEMMILAEAFKAA*KSSAML Trigger: CAGCATCGCCGAGGATTTCAAAGCTGCCTTGAAGGC...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGCCTTCAAGGCAGCTTaGAAATCCTCGGCGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQAFKAA*KSSAML Trigger: CAGCATCGCCGAGGATTTCAAAGCTGCCTTGAAGGC...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR GCA 72 bp | TCACAGAGCACGTGTATGTATTTGCATGGATTTAAATaGCTGAAACACAGCACATTAGGGTCTACTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SQSTCMYLHGFK*LKHSTLGSTQP Trigger: TGGCTGAGTAGACCCTAATGTGCTGTGTTTCAGGCATTTAAATCCATGCAAATACATACACGTGCTCTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229890.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGTCTGAAATGATGATTTaGGCTGAAAAACCTCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: FNVSARSFVPGYSGQRGRSEMMI*AEKPLC Trigger: GCATAGAGGTTTTTCAGCCAAAATCATCATTTCAGA...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGGTGGATGTTATAAGTTaGTCATTCTGGTCTGAAATG | + |
|
Preference number: 3 (lower is better) Translates to: FNVSARSFVPGYSGQRGRVDVIS*SFWSEM Trigger: CATTTCAGACCAGAATGACAAACTTATAACATCCAC...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGTCTGAAATGATGATTTaGGCTGAAAAACCTCTATGC | + |
|
Preference number: 3 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQSEMMI*AEKPLC Trigger: GCATAGAGGTTTTTCAGCCAAAATCATCATTTCAGA...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGTCCAAGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTACTCTCCTGGAGCAGCTaGAGCTGGTGGGAGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPRSNQCALPHFLATILLSWSS*SWWECL Trigger: CAGGCACTCCCACCAGCTGCAGCTGCTCCAGGAGAG...TAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCTTGGACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGTCCAAGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAGTCTTGCTGTCACAGTaGACGATCGCCCTCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPRSNQCALPHFLATILVLLSQ*TIALSP Trigger: TGGGGAGAGGGCGATCGTCCACTGTGACAGCAAGAC...TAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCTTGGACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACGCTGGTGGGAGTGCCTaGAGTCAGACCACAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSNQCALPHFLATILKRHAGGSA*SQTTGD Trigger: GTCGCCTGTGGTCTGACTCCAGGCACTCCCACCAGC...GTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACGCCCTCTCCCCAACCTaGGCCTCGTGGATAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSNQCALPHFLATILKRHALSPT*ASWIKP Trigger: TGGCTTTATCCACGAGGCTCAGGTTGGGGAGAGGGC...GTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGTGCAGCTGGTGGGAGTaGCTGGAGTCAGACCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FNVSARSFVPGYSGQRGRCSWWE*LESDHR Trigger: CCTGTGGTCTGACTCCAGGCACTCCCACCAGCTGCA...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGTGGAGCAGCTGCAGCTaGTGGGAGTGCCTGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FNVSARSFVPGYSGQRGRWSSCS*WECLES Trigger: TGACTCCAGGCACTCCCACCAGCTGCAGCTGCTCCA...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR TCA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTAGTGGGGCACATTCCTaGGGCGCTGGGGCTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALPHFLATILKRHHLVSSSGAHS*GAGAHH Trigger: ATGGTGAGCCCCAGCGCCTCAGGAATGTGCCCCACT...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGTCCAAGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTACGGGACCGACCCAGATaGAATCAGTATTTCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPRSNQCALPHFLATILRDRPR*NQYFHC Trigger: GCAATGGAAATACTGATTTCATCTGGGTCGGTCCCG...TAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCTTGGACTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCACAGATGCAAGCAGTaGGGCACATTCCTGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RSNQCALPHFLATILKRHHRCKQ*GTFLRR Trigger: GCGCCTCAGGAATGTGCCCCACTGCTTGCATCTGTG...GTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTGCTGGTGGGAGTGCCTaGAGTCAGACCACAGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALPHFLATILKRHHLVSSAGGSA*SQTTGD Trigger: GTCGCCTGTGGTCTGACTCCAGGCACTCCCACCAGC...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACGTCTTGCTGTCACAGTaGACGATCGCCCTCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSNQCALPHFLATILKRHVLLSQ*TIALSP Trigger: TGGGGAGAGGGCGATCGTCCACTGTGACAGCAAGAC...GTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR CAA 72 bp | GAGATAATGGCTGGTCCTACTGCCTTCAAGGCAGCTTaGAAATCCTCGGCGATGCTGAAGGCTAAGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EIMAGPTAFKAA*KSSAMLKAKML Trigger: CAGCATCTTAGCCTTCAGCATCGCCGAGGATTTCAAAGCTGCCTTGAAGGCAGTAGGACCAGCCATTATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR TCA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTGCCCTCTCCCCAACCTaGGCCTCGTGGATAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPHFLATILKRHHLVSSALSPT*ASWIKP Trigger: TGGCTTTATCCACGAGGCTCAGGTTGGGGAGAGGGC...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGTGTCGGTGGCACAGATaGAAGCAGTGGGGCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: FNVSARSFVPGYSGQRGRCRWHR*KQWGTF Trigger: GAATGTGCCCCACTGCTTGCATCTGTGCCACCGACA...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTAGCAGCTGCAGCTGGTaGGAGTGCCTGGAGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALPHFLATILKRHHLVSSSSCSW*ECLESD Trigger: GTCTGACTCCAGGCACTCCCACCAGCTGCAGCTGCT...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACTTCAGAAAGCTCTCCTaGAGCAGCTGCAGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSNQCALPHFLATILKRHFRKLS*SSCSWW Trigger: CCACCAGCTGCAGCTGCTCCAGGAGAGCTTTCTGAA...GTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR CAA 72 bp | AGGACGGAGAAGACAGCTAAACAGCTAAATGTCCCTTaGCACTACATGGGATGTGGCAGAACCCTGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RTEKTAKQLNVP*HYMGCGRTLWM Trigger: CATCCACAGGGTTCTGCCACATCCCATGTAGTGCAAAGGGACATTTAGCTGTTTAGCTGTCTTCTCCGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCCGTGGAGATGCTGGTaGTGTTGTTGTGGCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSNQCALPHFLATILKRHPWRCW*CCCGEE Trigger: TTCTTCGCCACAACAACATCACCAGCATCTCCACGG...GTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTTCCCGTGAAGGTAGATaGCTCTCAGCTGTCTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ALPHFLATILKRHHLVSSSREGR*LSAVSP Trigger: CGGGGAGACAGCTGAGAGGCATCTACCTTCACGGGA...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGTCCAAGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTACTGGTGATGTTGTTGTaGCGAAGAATTAAGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPRSNQCALPHFLATILLVMLL*RRIKVL Trigger: GAGCACCTTAATTCTTCGCCACAACAACATCACCAG...TAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCTTGGACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAAAGTGGGGCACATTCCTaGGGCGCTGGGGCTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PVDVISLSFWSEMMILAESGAHS*GAGAHH Trigger: ATGGTGAGCCCCAGCGCCTCAGGAATGTGCCCCACT...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTTGTCGGTGGCACAGATaGAAGCAGTGGGGCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: ALPHFLATILKRHHLVSSCRWHR*KQWGTF Trigger: GAATGTGCCCCACTGCTTGCATCTGTGCCACCGACA...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCTGAGAACACGGAATTaGCTGAGTCTGAGTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RSNQCALPHFLATILKRHLRTRN*LSLSQT Trigger: AGTCTGACTCAGACTCAGTCAATTCCGTGTTCTCAG...GTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAATGCAGCTGGTGGGAGTaGCTGGAGTCAGACCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVDVISLSFWSEMMILAECSWWE*LESDHR Trigger: CCTGTGGTCTGACTCCAGGCACTCCCACCAGCTGCA...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR GCA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGCTCTCCTGGAGCAGCTaGAGCTGGTGGGAGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQLSWSS*SWWECL Trigger: CAGGCACTCCCACCAGCTGCAGCTGCTCCAGGAGAG...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTTCTGTCTCTTGGCTTTaGATTTGCATGGGCACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ALPHFLATILKRHHLVSSSVSWL*ICMGTA Trigger: CGCCGTGCCCATGCAAATGCAAAGCCAAGAGACAGA...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGAGAGCCTTCAGCTCTTaGAATGTGGCACTCTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: FNVSARSFVPGYSGQRGRRAFSS*NVALFT Trigger: GGTAAAGAGTGCCACATTCCAAGAGCTGAAGGCTCT...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGAGTCAGACTTTGCCCTaGTGGACTTTAAGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FNVSARSFVPGYSGQRGRSQTLP*WTLRCP Trigger: AGGGCATCTTAAAGTCCACCAGGGCAAAGTCTGACT...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGCCGACTTCAGCCTATTaGATGATAAGTCCAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: FNVSARSFVPGYSGQRGRPTSAY*MISPDT Trigger: AGTGTCTGGACTTATCATCCAATAGGCTGAAGTCGG...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACGGCACTAAGTTTATATaGTGCATCGGTATGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSNQCALPHFLATILKRHGTKFI*CIGMEG Trigger: CCCTTCCATACCGATGCACCATATAAACTTAGTGCC...GTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGAGCAGCTGCAGCTGGTaGGAGTGCCTGGAGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQSSCSW*ECLESD Trigger: GTCTGACTCCAGGCACTCCCACCAGCTGCAGCTGCT...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGTGGAGCAGCTGCAGCTaGTGGGAGTGCCTGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQWSSCS*WECLES Trigger: TGACTCCAGGCACTCCCACCAGCTGCAGCTGCTCCA...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTAACGCCTCGTGGGCGTaGGATCTGTTTATGGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALPHFLATILKRHHLVSSNASWA*DLFMVK Trigger: TTTCACCATAAACAGATCCCACGCCCACGAGGCGTT...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGCACAGATGCAAGCAGTaGGGCACATTCCTGAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQHRCKQ*GTFLRR Trigger: GCGCCTCAGGAATGTGCCCCACTGCTTGCATCTGTG...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAACCGTGGAGATGCTGGTaGTGTTGTTGTGGCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PVDVISLSFWSEMMILAEPWRCW*CCCGEE Trigger: TTCTTCGCCACAACAACATCACCAGCATCTCCACGG...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAATCTGTCTCTTGGCTTTaGATTTGCATGGGCACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PVDVISLSFWSEMMILAESVSWL*ICMGTA Trigger: CGCCGTGCCCATGCAAATGCAAAGCCAAGAGACAGA...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTCCGACTTCAGCCTATTaGATGATAAGTCCAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: ALPHFLATILKRHHLVSSPTSAY*MISPDT Trigger: AGTGTCTGGACTTATCATCCAATAGGCTGAAGTCGG...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTACAGTCACATACAAATaGGTTCCCGTGAAGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALPHFLATILKRHHLVSSTVTYK*VPVKVD Trigger: ATCTACCTTCACGGGAACCCATTTGTATGTGACTGT...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAAAACGCCTCGTGGGCGTaGGATCTGTTTATGGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PVDVISLSFWSEMMILAENASWA*DLFMVK Trigger: TTTCACCATAAACAGATCCCACGCCCACGAGGCGTT...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAAGTGTTAAACGCCTCGTaGGCGTGGGATCTGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: PVDVISLSFWSEMMILAEVLNAS*AWDLFM Trigger: CATAAACAGATCCCACGCCCACGAGGCGTTTAACAC...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| 3UTR CAA 72 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTaGTACCAGGGTATTCAGGACAGCGAGGACGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QIMTSLMFQRDL*YQGIQDSEDGE Trigger: TTCTCCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR TCA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGCGGGACCGACCCAGATaGAATCAGTATTTCCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQRDRPR*NQYFHC Trigger: GCAATGGAAATACTGATTTCATCTGGGTCGGTCCCG...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAATCAGATCAGCCAGCTTaGACCTCCCAGTATACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: PVDVISLSFWSEMMILAESDQPA*TSQYTN Trigger: ATTTGTATACTGGGAGGTTCAAGCTGGCTGATCTGA...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAATTAAATTTGGGGTTGTaGAGAAACTGCCCGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVDVISLSFWSEMMILAELNLGL*RNCPWR Trigger: TCTCCACGGGCAGTTTCTCCACAACCCCAAATTTAA...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGAGAGCCTTCAGCTCTTaGAATGTGGCACTCTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQRAFSS*NVALFT Trigger: GGTAAAGAGTGCCACATTCCAAGAGCTGAAGGCTCT...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGAGTCAGACTTTGCCCTaGTGGACTTTAAGATGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQSQTLP*WTLRCP Trigger: AGGGCATCTTAAAGTCCACCAGGGCAAAGTCTGACT...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGCTGGTGATGTTGTTGTaGCGAAGAATTAAGGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQLVMLL*RRIKVL Trigger: GAGCACCTTAATTCTTCGCCACAACAACATCACCAG...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAAACAGTCACATACAAATaGGTTCCCGTGAAGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVDVISLSFWSEMMILAETVTYK*VPVKVD Trigger: ATCTACCTTCACGGGAACCCATTTGTATGTGACTGT...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 90 bp | TGTCGGTGGCACAGATGCAAGCAGTGGGGCACATTCCTGAGGCGCTaGGGCTCACCATCACTGCGATCACCAACAGACACAGCAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CRWHRCKQWGTFLRR*GSPSLRSPTDTAAL Trigger: GAGAGCTGCTGTGTCTGTTGGTGATCGCAGTGATGGTGAGCCCCAGCGCCTCAGGAATGTGCCCCACTGCTTGCATCTGTGCCACCGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS TCA 90 bp | GCTGACAATGTCGGTGGCACAGATGCAAGCAGTGGGGCACATTCCTaGGGCGCTGGGGCTCACCATCACTGCGATCACCAACAGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: ADNVGGTDASSGAHS*GAGAHHHCDHQQTQ Trigger: CTGTGTCTGTTGGTGATCGCAGTGATGGTGAGCCCCAGCGCCTCAGGAATGTGCCCCACTGCTTGCATCTGTGCCACCGACATTGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS TCA 90 bp | TTGCCAGTCTTGCTGTCACAGTGGACGATCGCCCTCTCCCCAACCTaGGCCTCGTGGATAAAGCCAAGTGCGTGGAAGGAGCCGTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: LPVLLSQWTIALSPT*ASWIKPSAWKEPLI Trigger: TATCAACGGCTCCTTCCACGCACTTGGCTTTATCCACGAGGCTCAGGTTGGGGAGAGGGCGATCGTCCACTGTGACAGCAAGACTGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 90 bp | TCAGCAGAGGCATCGCCAGTGGGGCCAGGACTGAGAATGGACGAGTaGGCACTGCTTTGGCTCAGCGTGTTTTTCTGTCTCTTGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SAEASPVGPGLRMDE*ALLWLSVFFCLLAL Trigger: CAAAGCCAAGAGACAGAAAAACACGCTGAGCCAAAGCAGTGCCCACTCGTCCATTCTCAGTCCTGGCCCCACTGGCGATGCCTCTGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 90 bp | GCCACGCAGGCAGCCAGGGTGGTAAAGGCCGTGTTAAACGCCTCGTaGGCGTGGGATCTGTTTATGGTGAAATTGCTCACGTTGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: ATQAARVVKAVLNAS*AWDLFMVKLLTLIM Trigger: CATGATCAACGTGAGCAATTTCACCATAAACAGATCCCACGCCCACGAGGCGTTTAACACGGCCTTTACCACCCTGGCTGCCTGCGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 90 bp | TCGCCAGTGGGGCCAGGACTGAGAATGGACGAGTGGGCACTGCTTTaGCTCAGCGTGTTTTTCTGTCTCTTGGCTTTGCATTTGCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPVGPGLRMDEWALL*LSVFFCLLALHLHG Trigger: CCCATGCAAATGCAAAGCCAAGAGACAGAAAAACACGCTGAGCCAAAGCAGTGCCCACTCGTCCATTCTCAGTCCTGGCCCCACTGGCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTCCAAGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAGGGAAAAGCTTGACTTaGCCATTCTGTCCGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSPRSNQCALPHFLATILGKSLT*PFCPAA Trigger: GGCGGCCGGACAGAATGGCAAAGTCAAGCTTTTCCC...TAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCTTGGACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS GCA 90 bp | GACGATCGCCCTCTCCCCAACCTGAGCCTCGTGGATAAAGCCAAGTaGGTGGAAGGAGCCGTTGATAACGCTGTAAGAACAGTTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DDRPLPNLSLVDKAK*VEGAVDNAVRTVQK Trigger: TTTCTGAACTGTTCTTACAGCGTTATCAACGGCTCCTTCCACGCACTTGGCTTTATCCACGAGGCTCAGGTTGGGGAGAGGGCGATCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 90 bp | GGGGTTGTGGAGAAACTGCCCGTGGAGATGCTGGTGATGTTGTTGTaGCGAAGAATTAAGGTGCTCAGCTTGACAAACGACACCGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GVVEKLPVEMLVMLL*RRIKVLSLTNDTGI Trigger: GATCCCGGTGTCGTTTGTCAAGCTGAGCACCTTAATTCTTCGCCACAACAACATCACCAGCATCTCCACGGGCAGTTTCTCCACAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTCCAAGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTACGAGTGGGCACTGCTTaGGCTCAGCGTGTTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSPRSNQCALPHFLATILRVGTA*AQRVFL Trigger: CAGAAAAACACGCTGAGCCAAAGCAGTGCCCACTCG...TAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCTTGGACTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 90 bp | CAGGCAGCCAGGGTGGTAAAGGCCGTGTTAAACGCCTCGTGGGCGTaGGATCTGTTTATGGTGAAATTGCTCACGTTGATCATGATATCC | + |
|
Preference number: 5 (lower is better) Translates to: QAARVVKAVLNASWA*DLFMVKLLTLIMIS Trigger: GGATATCATGATCAACGTGAGCAATTTCACCATAAACAGATCCCACGCCCACGAGGCGTTTAACACGGCCTTTACCACCCTGGCTGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS GCA 90 bp | AGTGGGCACTGCTTTGGCTCAGCGTGTTTTTCTGTCTCTTGGCTTTaGATTTGCATGGGCACGGCGTCAGGTACAGATACAGTAGCACTA | + |
|
Preference number: 5 (lower is better) Translates to: SGHCFGSACFSVSWL*ICMGTASGTDTVAL Trigger: TAGTGCTACTGTATCTGTACCTGACGCCGTGCCCATGCAAATGCAAAGCCAAGAGACAGAAAAACACGCTGAGCCAAAGCAGTGCCCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 90 bp | GTACCAAAAGATCAGCAACGAGTACAGAGAACAGTCACATACAAATaGGTTCCCGTGAAGGTAGATGCCTCTCAGCTGTCTCCCCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPKDQQRVQRTVTYK*VPVKVDASQLSPRH Trigger: GTGCCGGGGAGACAGCTGAGAGGCATCTACCTTCACGGGAACCCATTTGTATGTGACTGTTCTCTGTACTCGTTGCTGATCTTTTGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTCCAAGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTACAGAGCCTTCAGCTCTaGGAATGTGGCACTCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: PSPRSNQCALPHFLATILQSLQL*ECGTLY Trigger: GTAAAGAGTGCCACATTCCAAGAGCTGAAGGCTCTG...TAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCTTGGACTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTCCAAGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTATTTCCATTGCCAGTCTaGCTGTCACAGTGGACGATC | + |
|
Preference number: 5 (lower is better) Translates to: PSPRSNQCALPHFLATILFPLPV*LSQWTI Trigger: GATCGTCCACTGTGACAGCAAGACTGGCAATGGAAA...TAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCTTGGACTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS TCA 90 bp | TGTCTTTATCTGGCTCCAGCAGCCTGTTATCGGGACCGACCCAGATaGAATCAGTATTTCCATTGCCAGTCTTGCTGTCACAGTGGACGA | + |
|
Preference number: 5 (lower is better) Translates to: CLYLAPAACYRDRPR*NQYFHCQSCCHSGR Trigger: TCGTCCACTGTGACAGCAAGACTGGCAATGGAAATACTGATTTCATCTGGGTCGGTCCCGATAACAGGCTGCTGGAGCCAGATAAAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGTCCAAGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAACTTTAAATTTGGGGTaGTGGAGAAACTGCCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPRSNQCALPHFLATILTLNLG*WRNCPW Trigger: CCACGGGCAGTTTCTCCACAACCCCAAATTTAAAGT...TAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCTTGGACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGCGAGTGGGCACTGCTTaGGCTCAGCGTGTTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FNVSARSFVPGYSGQRGRRVGTA*AQRVFL Trigger: CAGAAAAACACGCTGAGCCAAAGCAGTGCCCACTCG...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS GCA 90 bp | AGTACAGAGAACAGTCACATACAAATGGGTTCCCGTGAAGGTAGATaGCTCTCAGCTGTCTCCCCGGCACTAAGTTTATATGGTGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: STENSHIQMGSREGR*LSAVSPALSLYGAS Trigger: CGATGCACCATATAAACTTAGTGCCGGGGAGACAGCTGAGAGGCATCTACCTTCACGGGAACCCATTTGTATGTGACTGTTCTCTGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS GCA 90 bp | TTGCTCACGTTGATCATGATATCCACCGTCTCGTTTAACAGCCGCTaGCTGTTCATTGCGATACAAGAATATACCCCGGCGTCCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLTLIMISTVSFNSR*LFIAIQEYTPASSK Trigger: CTTTGAGGACGCCGGGGTATATTCTTGTATCGCAATGAACAGGCAGCGGCTGTTAAACGAGACGGTGGATATCATGATCAACGTGAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS GCA 90 bp | CACTGCTTTGGCTCAGCGTGTTTTTCTGTCTCTTGGCTTTGCATTTaGATGGGCACGGCGTCAGGTACAGATACAGTAGCACTAGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: HCFGSACFSVSWLCI*MGTASGTDTVALEL Trigger: TAGTTCTAGTGCTACTGTATCTGTACCTGACGCCGTGCCCATGCAAATGCAAAGCCAAGAGACAGAAAAACACGCTGAGCCAAAGCAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 90 bp | CAGACTTCCGTTGTAAAACACACGAAAGTTCCCCATGTCTTTATCTaGCTCCAGCAGCCTGTTATCGGGACCGACCCAGATGAAATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QTSVVKHTKVPHVFI*LQQPVIGTDPDEIS Trigger: ACTGATTTCATCTGGGTCGGTCCCGATAACAGGCTGCTGGAGCCAGATAAAGACATGGGGAACTTTCGTGTGTTTTACAACGGAAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGCAGAGCCTTCAGCTCTaGGAATGTGGCACTCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: FNVSARSFVPGYSGQRGRQSLQL*ECGTLY Trigger: GTAAAGAGTGCCACATTCCAAGAGCTGAAGGCTCTG...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACTCACTGGGGAAAAGCTaGACTTTGCCATTCTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSNQCALPHFLATILKRHSLGKS*TLPFCP Trigger: CGGACAGAATGGCAAAGTCAAGCTTTTCCCCAGTGA...GTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGACTTTAAATTTGGGGTaGTGGAGAAACTGCCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FNVSARSFVPGYSGQRGRTLNLG*WRNCPW Trigger: CCACGGGCAGTTTCTCCACAACCCCAAATTTAAAGT...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGGTCAGATCAGCCAGCTaGAACCTCCCAGTATACAAA | + |
|
Preference number: 5 (lower is better) Translates to: FNVSARSFVPGYSGQRGRVRSAS*NLPVYK Trigger: TTTGTATACTGGGAGGTTCAAGCTGGCTGATCTGAC...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGATGCTGGTGATGTTGTaGTGGCGAAGAATTAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FNVSARSFVPGYSGQRGRMLVML*WRRIKV Trigger: CACCTTAATTCTTCGCCACAACAACATCACCAGCAT...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGCAACCAGTGTGCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCCAGACACTTTAAATTaGGGGTTGTGGAGAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSNQCALPHFLATILKRHPDTLN*GLWRNC Trigger: GCAGTTTCTCCACAACCCCAAATTTAAAGTGTCTGG...GTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGCACACTGGTTGCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTTTTCCATTGCCAGTCTaGCTGTCACAGTGGACGATC | + |
|
Preference number: 5 (lower is better) Translates to: ALPHFLATILKRHHLVSSFPLPV*LSQWTI Trigger: GATCGTCCACTGTGACAGCAAGACTGGCAATGGAAA...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGTTAGATAGGTTTTTGTaGGTGCAGCTGACAATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FNVSARSFVPGYSGQRGRLDRFL*VQLTMS Trigger: CGACATTGTCAGCTGCACCAACAAAAACCTATCTAA...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGACAGCGAGGACGGAAATCAGTATTTCCATaGCCAGTCTTGCTGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FNVSARSFVPGYSGQRGRKSVFP*PVLLSQ Trigger: CTGTGACAGCAAGACTGGCAATGGAAATACTGATTT...CCGTCCTCGCTGTCCTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGGGAAAAGCTTGACTTaGCCATTCTGTCCGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQGKSLT*PFCPAA Trigger: GGCGGCCGGACAGAATGGCAAAGTCAAGCTTTTCCC...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 90 bp | CTCTCAGCTGTCTCCCCGGCACTAAGTTTATATGGTGCATCGGTATaGAAGGGATTCGATTATAGGAAACATCTAAAAATGTCAGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSAVSPALSLYGASV*KGFDYRKHLKMSDQ Trigger: CTGATCTGACATTTTTAGATGTTTCCTATAATCGAATCCCTTCCATACCGATGCACCATATAAACTTAGTGCCGGGGAGACAGCTGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTCCAGACACTTTAAATTaGGGGTTGTGGAGAAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALPHFLATILKRHHLVSSPDTLN*GLWRNC Trigger: GCAGTTTCTCCACAACCCCAAATTTAAAGTGTCTGG...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAATTCTGTCTCTTGGCTTaGCATTTGCATGGGCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: PVDVISLSFWSEMMILAEFCLLA*HLHGHG Trigger: GCCGTGCCCATGCAAATGCAAAGCCAAGAGACAGAA...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTTTAGATAGGTTTTTGTaGGTGCAGCTGACAATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ALPHFLATILKRHHLVSSLDRFL*VQLTMS Trigger: CGACATTGTCAGCTGCACCAACAAAAACCTATCTAA...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCCTCACTTCCTAGCAACCATCTTAAAAAGACACCATTTGGTTTCATCTACCTTAGATAGGTTTTaGTTGGTGCAGCTGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: ALPHFLATILKRHHLVSSTLDRF*LVQLTM Trigger: CATTGTCAGCTGCACCAACAAAAACCTATCTAAGGT...AGATGAAACCAAATGGTGTCTTTTTAAGATGGTTGCTAGGAAGTGAGGCAGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAAGCCGCTGCCTGTTCATaGCGATACAAGAATATACCC | + |
|
Preference number: 5 (lower is better) Translates to: PVDVISLSFWSEMMILAEAAACS*RYKNIP Trigger: GGGTATATTCTTGTATCGCAATGAACAGGCAGCGGC...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGTTCTGTCTCTTGGCTTaGCATTTGCATGGGCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQFCLLA*HLHGHG Trigger: GCCGTGCCCATGCAAATGCAAAGCCAAGAGACAGAA...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAATCACTGGGGAAAAGCTaGACTTTGCCATTCTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: PVDVISLSFWSEMMILAESLGKS*TLPFCP Trigger: CGGACAGAATGGCAAAGTCAAGCTTTTCCCCAGTGA...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGCCGCTGCCTGTTCATaGCGATACAAGAATATACCC | + |
|
Preference number: 5 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQAAACS*RYKNIP Trigger: GGGTATATTCTTGTATCGCAATGAACAGGCAGCGGC...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAAAGTCTGAGTCAGACTTaGCCCTGGTGGACTTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PVDVISLSFWSEMMILAESLSQT*PWWTLR Trigger: TCTTAAAGTCCACCAGGGCAAAGTCTGACTCAGACT...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGGTCAGATCAGCCAGCTaGAACCTCCCAGTATACAAA | + |
|
Preference number: 5 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQVRSAS*NLPVYK Trigger: TTTGTATACTGGGAGGTTCAAGCTGGCTGATCTGAC...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CAAATAATGACATCTTTAATGTTTCAGCGAGATCTTTTGTACCAGGGTATTCAGAGTCTGAGTCAGACTTaGCCCTGGTGGACTTTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QIMTSLMFQRDLLYQGIQSLSQT*PWWTLR Trigger: TCTTAAAGTCCACCAGGGCAAAGTCTGACTCAGACT...CTGAATACCCTGGTACAAAAGATCTCGCTGAAACATTAAAGATGTCATTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAAACCTTAGATAGGTTTTaGTTGGTGCAGCTGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: PVDVISLSFWSEMMILAETLDRF*LVQLTM Trigger: CATTGTCAGCTGCACCAACAAAAACCTATCTAAGGT...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTGGATGTTATAAGTTTGTCATTCTGGTCTGAAATGATGATTTTGGCTGAAAAATCAGTATTTCCATaGCCAGTCTTGCTGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: PVDVISLSFWSEMMILAEKSVFP*PVLLSQ Trigger: CTGTGACAGCAAGACTGGCAATGGAAATACTGATTT...TTCAGCCAAAATCATCATTTCAGACCAGAATGACAAACTTATAACATCCACAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS TCA 72 bp | GTCGGTGGCACAGATGCAAGCAGTGGGGCACATTCCTaGGGCGCTGGGGCTCACCATCACTGCGATCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: VGGTDASSGAHS*GAGAHHHCDHQ Trigger: TTGGTGATCGCAGTGATGGTGAGCCCCAGCGCCTCAGGAATGTGCCCCACTGCTTGCATCTGTGCCACCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS TCA 72 bp | TTGCTGTCACAGTGGACGATCGCCCTCTCCCCAACCTaGGCCTCGTGGATAAAGCCAAGTGCGTGGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLSQWTIALSPT*ASWIKPSAWKE Trigger: CTCCTTCCACGCACTTGGCTTTATCCACGAGGCTCAGGTTGGGGAGAGGGCGATCGTCCACTGTGACAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS GCA 72 bp | GTCCTTCAGGGGCTCCAGAAACACGACTCTTTTACCTaGCTTCCGATCGTCAGCAGAGGCATCGCCAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLQGLQKHDSFT*LPIVSRGIASG Trigger: CCCACTGGCGATGCCTCTGCTGACGATCGGAAGGCAGGTAAAAGAGTCGTGTTTCTGGAGCCCCTGAAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 72 bp | CACAGATGCAAGCAGTGGGGCACATTCCTGAGGCGCTaGGGCTCACCATCACTGCGATCACCAACAGACACA | + |
|
Preference number: 6 (lower is better) Translates to: HRCKQWGTFLRR*GSPSLRSPTDT Trigger: TGTGTCTGTTGGTGATCGCAGTGATGGTGAGCCCCAGCGCCTCAGGAATGTGCCCCACTGCTTGCATCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 72 bp | GCATCGCCAGTGGGGCCAGGACTGAGAATGGACGAGTaGGCACTGCTTTGGCTCAGCGTGTTTTTCTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASPVGPGLRMDE*ALLWLSVFFCL Trigger: GAGACAGAAAAACACGCTGAGCCAAAGCAGTGCCCACTCGTCCATTCTCAGTCCTGGCCCCACTGGCGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 72 bp | GCAGCCAGGGTGGTAAAGGCCGTGTTAAACGCCTCGTaGGCGTGGGATCTGTTTATGGTGAAATTGCTCACG | + |
|
Preference number: 6 (lower is better) Translates to: AARVVKAVLNAS*AWDLFMVKLLT Trigger: CGTGAGCAATTTCACCATAAACAGATCCCACGCCCACGAGGCGTTTAACACGGCCTTTACCACCCTGGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 90 bp | AGCAGCCTGTTATCGGGACCGACCCAGATGAAATCAGTATTTCCATaGCCAGTCTTGCTGTCACAGTGGACGATCGCCCTCTCCCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: SSLLSGPTQMKSVFP*PVLLSQWTIALSPT Trigger: GGTTGGGGAGAGGGCGATCGTCCACTGTGACAGCAAGACTGGCAATGGAAATACTGATTTCATCTGGGTCGGTCCCGATAACAGGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 90 bp | ATCGCCAGTGGGGCCAGGACTGAGAATGGACGAGTGGGCACTGCTTaGGCTCAGCGTGTTTTTCTGTCTCTTGGCTTTGCATTTGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: IASGARTENGRVGTA*AQRVFLSLGFAFAW Trigger: CCATGCAAATGCAAAGCCAAGAGACAGAAAAACACGCTGAGCCAAAGCAGTGCCCACTCGTCCATTCTCAGTCCTGGCCCCACTGGCGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS GCA 72 bp | CCTCTCCCCAACCTGAGCCTCGTGGATAAAGCCAAGTaGGTGGAAGGAGCCGTTGATAACGCTGTAAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: PLPNLSLVDKAK*VEGAVDNAVRT Trigger: TGTTCTTACAGCGTTATCAACGGCTCCTTCCACGCACTTGGCTTTATCCACGAGGCTCAGGTTGGGGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | CCGACCCAGATGAAATCAGTATTTCCATTGCCAGTCTaGCTGTCACAGTGGACGATCGCCCTCTCCCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: PTQMKSVFPLPV*LSQWTIALSPT Trigger: GGTTGGGGAGAGGGCGATCGTCCACTGTGACAGCAAGACTGGCAATGGAAATACTGATTTCATCTGGGTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS TCA 72 bp | CTGGCTCCAGCAGCCTGTTATCGGGACCGACCCAGATaGAATCAGTATTTCCATTGCCAGTCTTGCTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LAPAACYRDRPR*NQYFHCQSCCH Trigger: GTGACAGCAAGACTGGCAATGGAAATACTGATTTCATCTGGGTCGGTCCCGATAACAGGCTGCTGGAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 90 bp | TTTGGGGTTGTGGAGAAACTGCCCGTGGAGATGCTGGTGATGTTGTaGTGGCGAAGAATTAAGGTGCTCAGCTTGACAAACGACACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: FGVVEKLPVEMLVML*WRRIKVLSLTNDTG Trigger: CCCGGTGTCGTTTGTCAAGCTGAGCACCTTAATTCTTCGCCACAACAACATCACCAGCATCTCCACGGGCAGTTTCTCCACAACCCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 90 bp | GAGTGGGCACTGCTTTGGCTCAGCGTGTTTTTCTGTCTCTTGGCTTaGCATTTGCATGGGCACGGCGTCAGGTACAGATACAGTAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: EWALLWLSVFFCLLA*HLHGHGVRYRYSST Trigger: AGTGCTACTGTATCTGTACCTGACGCCGTGCCCATGCAAATGCAAAGCCAAGAGACAGAAAAACACGCTGAGCCAAAGCAGTGCCCACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 90 bp | ATGGACGAGTGGGCACTGCTTTGGCTCAGCGTGTTTTTCTGTCTCTaGGCTTTGCATTTGCATGGGCACGGCGTCAGGTACAGATACAGT | + |
|
Preference number: 6 (lower is better) Translates to: MDEWALLWLSVFFCL*ALHLHGHGVRYRYS Trigger: ACTGTATCTGTACCTGACGCCGTGCCCATGCAAATGCAAAGCCAAGAGACAGAAAAACACGCTGAGCCAAAGCAGTGCCCACTCGTCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 90 bp | GAGATGCTGGTGATGTTGTTGTGGCGAAGAATTAAGGTGCTCAGCTaGACAAACGACACCGGGATCCAGTCGGCATCCAACAGTCCGATT | + |
|
Preference number: 6 (lower is better) Translates to: EMLVMLLWRRIKVLS*TNDTGIQSASNSPI Trigger: AATCGGACTGTTGGATGCCGACTGGATCCCGGTGTCGTTTGTCAAGCTGAGCACCTTAATTCTTCGCCACAACAACATCACCAGCATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 90 bp | AACGCCTCGTGGGCGTGGGATCTGTTTATGGTGAAATTGCTCACGTaGATCATGATATCCACCGTCTCGTTTAACAGCCGCTGCCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: NASWAWDLFMVKLLT*IMISTVSFNSRCLF Trigger: GAACAGGCAGCGGCTGTTAAACGAGACGGTGGATATCATGATCAACGTGAGCAATTTCACCATAAACAGATCCCACGCCCACGAGGCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 90 bp | GCCGTGTTAAACGCCTCGTGGGCGTGGGATCTGTTTATGGTGAAATaGCTCACGTTGATCATGATATCCACCGTCTCGTTTAACAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AVLNASWAWDLFMVK*LTLIMISTVSFNSR Trigger: GCGGCTGTTAAACGAGACGGTGGATATCATGATCAACGTGAGCAATTTCACCATAAACAGATCCCACGCCCACGAGGCGTTTAACACGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS TCA 72 bp | TTGGGGTTGTGGAGAAACTGCCCGTGGAGATGCTGGTaGTGTTGTTGTGGCGAAGAATTAAGGTGCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGLWRNCPWRCW*CCCGEELRCSA Trigger: AGCTGAGCACCTTAATTCTTCGCCACAACAACATCACCAGCATCTCCACGGGCAGTTTCTCCACAACCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS TCA 72 bp | TGGATGCCACAAAGGGTGTGTCTGAGAACACGGAATTaGCTGAGTCTGAGTCAGACTTTGCCCTGGTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: WMPQRVCLRTRN*LSLSQTLPWWT Trigger: AGTCCACCAGGGCAAAGTCTGACTCAGACTCAGTCAATTCCGTGTTCTCAGACACACCCTTTGTGGCATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS GCA 72 bp | GGCTCAGCGTGTTTTTCTGTCTCTTGGCTTTGCATTTaGATGGGCACGGCGTCAGGTACAGATACAGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSACFSVSWLCI*MGTASGTDTVA Trigger: TGCTACTGTATCTGTACCTGACGCCGTGCCCATGCAAATGCAAAGCCAAGAGACAGAAAAACACGCTGAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 72 bp | AGGGTGGTAAAGGCCGTGTTAAACGCCTCGTGGGCGTaGGATCTGTTTATGGTGAAATTGCTCACGTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: RVVKAVLNASWA*DLFMVKLLTLI Trigger: GATCAACGTGAGCAATTTCACCATAAACAGATCCCACGCCCACGAGGCGTTTAACACGGCCTTTACCACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | GTGATGTTGTTGTGGCGAAGAATTAAGGTGCTCAGCTaGACAAACGACACCGGGATCCAGTCGGCATCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: VMLLWRRIKVLS*TNDTGIQSASN Trigger: GTTGGATGCCGACTGGATCCCGGTGTCGTTTGTCAAGCTGAGCACCTTAATTCTTCGCCACAACAACATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | TATCCACCGTCTCGTTTAACAGCCGCTGCCTGTTCATaGCGATACAAGAATATACCCCGGCGTCCTCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: YPPSRLTAAACS*RYKNIPRRPQS Trigger: GCTTTGAGGACGCCGGGGTATATTCTTGTATCGCAATGAACAGGCAGCGGCTGTTAAACGAGACGGTGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 90 bp | TTAATCAGTCTGAAAAGGTTCCCGGGCACCTTAGATAGGTTTTTGTaGGTGCAGCTGACAATGTCGGTGGCACAGATGCAAGCAGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LISLKRFPGTLDRFL*VQLTMSVAQMQAVG Trigger: CCCCACTGCTTGCATCTGTGCCACCGACATTGTCAGCTGCACCAACAAAAACCTATCTAAGGTGCCCGGGAACCTTTTCAGACTGATTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS GCA 72 bp | TGCTTTGGCTCAGCGTGTTTTTCTGTCTCTTGGCTTTaGATTTGCATGGGCACGGCGTCAGGTACAGATACA | + |
|
Preference number: 6 (lower is better) Translates to: CFGSACFSVSWL*ICMGTASGTDT Trigger: TGTATCTGTACCTGACGCCGTGCCCATGCAAATGCAAAGCCAAGAGACAGAAAAACACGCTGAGCCAAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 72 bp | GAGAAACTGCCCGTGGAGATGCTGGTGATGTTGTTGTaGCGAAGAATTAAGGTGCTCAGCTTGACAAACGAC | + |
|
Preference number: 6 (lower is better) Translates to: EKLPVEMLVMLL*RRIKVLSLTND Trigger: GTCGTTTGTCAAGCTGAGCACCTTAATTCTTCGCCACAACAACATCACCAGCATCTCCACGGGCAGTTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | CTGAAAAGGTTCCCGGGCACCTTAGATAGGTTTTTGTaGGTGCAGCTGACAATGTCGGTGGCACAGATGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LKRFPGTLDRFL*VQLTMSVAQMQ Trigger: TTGCATCTGTGCCACCGACATTGTCAGCTGCACCAACAAAAACCTATCTAAGGTGCCCGGGAACCTTTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | AGTCTGAAAAGGTTCCCGGGCACCTTAGATAGGTTTTaGTTGGTGCAGCTGACAATGTCGGTGGCACAGATG | + |
|
Preference number: 6 (lower is better) Translates to: SLKRFPGTLDRF*LVQLTMSVAQM Trigger: CATCTGTGCCACCGACATTGTCAGCTGCACCAACAAAAACCTATCTAAGGTGCCCGGGAACCTTTTCAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | GTGGAGAAACTGCCCGTGGAGATGCTGGTGATGTTGTaGTGGCGAAGAATTAAGGTGCTCAGCTTGACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VEKLPVEMLVML*WRRIKVLSLTN Trigger: GTTTGTCAAGCTGAGCACCTTAATTCTTCGCCACAACAACATCACCAGCATCTCCACGGGCAGTTTCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | GTTGTGGAGAAACTGCCCGTGGAGATGCTGGTGATGTaGTTGTGGCGAAGAATTAAGGTGCTCAGCTTGACA | + |
|
Preference number: 6 (lower is better) Translates to: VVEKLPVEMLVM*LWRRIKVLSLT Trigger: TGTCAAGCTGAGCACCTTAATTCTTCGCCACAACAACATCACCAGCATCTCCACGGGCAGTTTCTCCACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 90 bp | AAATTTGGGGTTGTGGAGAAACTGCCCGTGGAGATGCTGGTGATGTaGTTGTGGCGAAGAATTAAGGTGCTCAGCTTGACAAACGACACC | + |
|
Preference number: 6 (lower is better) Translates to: KFGVVEKLPVEMLVM*LWRRIKVLSLTNDT Trigger: GGTGTCGTTTGTCAAGCTGAGCACCTTAATTCTTCGCCACAACAACATCACCAGCATCTCCACGGGCAGTTTCTCCACAACCCCAAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS GCA 72 bp | TTGATCATGATATCCACCGTCTCGTTTAACAGCCGCTaGCTGTTCATTGCGATACAAGAATATACCCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LIMISTVSFNSR*LFIAIQEYTPA Trigger: CGCCGGGGTATATTCTTGTATCGCAATGAACAGGCAGCGGCTGTTAAACGAGACGGTGGATATCATGATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 72 bp | TTGTACAGCAGCAGTACTTCCAGAGCCTTCAGCTCTTaGAATGTGGCACTCTTTACCGACTTCAGCCTATTG | + |
|
Preference number: 6 (lower is better) Translates to: LYSSSTSRAFSS*NVALFTDFSLL Trigger: CAATAGGCTGAAGTCGGTAAAGAGTGCCACATTCCAAGAGCTGAAGGCTCTGGAAGTACTGCTGCTGTACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 72 bp | GATCAGCAACGAGTACAGAGAACAGTCACATACAAATaGGTTCCCGTGAAGGTAGATGCCTCTCAGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: DQQRVQRTVTYK*VPVKVDASQLS Trigger: AGACAGCTGAGAGGCATCTACCTTCACGGGAACCCATTTGTATGTGACTGTTCTCTGTACTCGTTGCTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | GTTGTACAGCAGCAGTACTTCCAGAGCCTTCAGCTCTaGGAATGTGGCACTCTTTACCGACTTCAGCCTATT | + |
|
Preference number: 6 (lower is better) Translates to: VVQQQYFQSLQL*ECGTLYRLQPI Trigger: AATAGGCTGAAGTCGGTAAAGAGTGCCACATTCCAAGAGCTGAAGGCTCTGGAAGTACTGCTGCTGTACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | TGGGCGTGGGATCTGTTTATGGTGAAATTGCTCACGTaGATCATGATATCCACCGTCTCGTTTAACAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: WAWDLFMVKLLT*IMISTVSFNSR Trigger: GCGGCTGTTAAACGAGACGGTGGATATCATGATCAACGTGAGCAATTTCACCATAAACAGATCCCACGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | AACGCCTCGTGGGCGTGGGATCTGTTTATGGTGAAATaGCTCACGTTGATCATGATATCCACCGTCTCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NASWAWDLFMVK*LTLIMISTVSF Trigger: AAACGAGACGGTGGATATCATGATCAACGTGAGCAATTTCACCATAAACAGATCCCACGCCCACGAGGCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS GCA 72 bp | AACAGTCACATACAAATGGGTTCCCGTGAAGGTAGATaGCTCTCAGCTGTCTCCCCGGCACTAAGTTTATAT | + |
|
Preference number: 6 (lower is better) Translates to: NSHIQMGSREGR*LSAVSPALSLY Trigger: ATATAAACTTAGTGCCGGGGAGACAGCTGAGAGGCATCTACCTTCACGGGAACCCATTTGTATGTGACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | TCAGCCTATTGGATGATAAGTCCAGACACTTTAAATTaGGGGTTGTGGAGAAACTGCCCGTGGAGATGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SAYWMISPDTLN*GLWRNCPWRCW Trigger: CCAGCATCTCCACGGGCAGTTTCTCCACAACCCCAAATTTAAAGTGTCTGGACTTATCATCCAATAGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 72 bp | CTTGGAATGTGGCACTCTTTACCGACTTCAGCCTATTaGATGATAAGTCCAGACACTTTAAATTTGGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LGMWHSLPTSAY*MISPDTLNLGL Trigger: CAACCCCAAATTTAAAGTGTCTGGACTTATCATCCAATAGGCTGAAGTCGGTAAAGAGTGCCACATTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CCA 72 bp | GTCTCCCCGGCACTAAGTTTATATGGTGCATCGGTATaGAAGGGATTCGATTATAGGAAACATCTAAAAATG | + |
|
Preference number: 6 (lower is better) Translates to: VSPALSLYGASV*KGFDYRKHLKM Trigger: CATTTTTAGATGTTTCCTATAATCGAATCCCTTCCATACCGATGCACCATATAAACTTAGTGCCGGGGAGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||
| CDS CAA 72 bp | TCTTGGAATGTGGCACTCTTTACCGACTTCAGCCTATaGGATGATAAGTCCAGACACTTTAAATTTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SWNVALFTDFSL*DDKSRHFKFGV Trigger: AACCCCAAATTTAAAGTGTCTGGACTTATCATCCAATAGGCTGAAGTCGGTAAAGAGTGCCACATTCCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053106.7 ENSMUST00000229890.2 |
||