RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMH (Mus musculus)

Ensembl gene IDs: ENSMUSG00000035262

Ensembl transcript IDs: ENSMUST00000036016.6

Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CGCAGCTCTGAGGCTGCCGCCTGCAGCTCCACTGCCACCCTGCGTTaGAGGCCCGCTGCCCAGGGAGCAGAAGCGGGGCCGTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: RSSEAAACSSTATLR*RPAAQGAEAGPCSG
Trigger: GCCGCTGCACGGCCCCGCTTCTGCTCCCTGGGCAGCGGGCCTGCAACGCAGGGTGGCAGTGGAGCTGCAGGCGGCAGCCTCAGAGCTGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 90 bp TCAGCTCGCGCAGCGCGCAAGGCCCGTCTGTCCCTGTCCCCGCGCTaGGCCCCGTTCTCCCACGCCCTTCCCGCCCATGCCACTCGGCAC +
Preference number: 5 (lower is better)
Translates to: SARAARKARLSLSPR*APFSHALPAHATRH
Trigger: GTGCCGAGTGGCATGGGCGGGAAGGGCGTGGGAGAACGGGGCGCAGCGCGGGGACAGGGACAGACGGGCCTTGCGCGCTGCGCGAGCTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 90 bp GGTCCCGCAGCTCTGAGGCTGCCGCCTGCAGCTCCACTGCCACCCTaGGTTGCAGGCCCGCTGCCCAGGGAGCAGAAGCGGGGCCGTGCA +
Preference number: 5 (lower is better)
Translates to: GPAALRLPPAAPLPP*VAGPLPREQKRGRA
Trigger: TGCACGGCCCCGCTTCTGCTCCCTGGGCAGCGGGCCTGCAACGCAGGGTGGCAGTGGAGCTGCAGGCGGCAGCCTCAGAGCTGCGGGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CCA 90 bp CGTTGGGACACAGCGCTAGCAGGCGCGCCAGCAGCGGGGGAGCTGTaGGTGGCAGACCCGGGAGGTCCCGCAGCTCTGAGGCTGCCGCCT +
Preference number: 5 (lower is better)
Translates to: RWDTALAGAPAAGEL*VADPGGPAALRLPP
Trigger: AGGCGGCAGCCTCAGAGCTGCGGGACCTCCCGGGTCTGCCACCCACAGCTCCCCCGCTGCTGGCGCGCCTGCTAGCGCTGTGTCCCAACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 90 bp ACCCTGCGTTGCAGGCCCGCTGCCCAGGGAGCAGAAGCGGGGCCGTaGAGCGGCATAGGTTCCCTCTCCGTGGCCGCAGCGGGTGACAGC +
Preference number: 5 (lower is better)
Translates to: TLRCRPAAQGAEAGP*SGIGSLSVAAAGDS
Trigger: GCTGTCACCCGCTGCGGCCACGGAGAGGGAACCTATGCCGCTGCACGGCCCCGCTTCTGCTCCCTGGGCAGCGGGCCTGCAACGCAGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 90 bp CCAGGCTGCGGGAAAGGCATGGTGTCCAGCTGGCCGTGTGCTGGCTaGGGTGACGGCTCGGCGGGTGGCAGCACCACCAGGGTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: PGCGKGMVSSWPCAG*GDGSAGGSTTRVGV
Trigger: GACTCCCACCCTGGTGGTGCTGCCACCCGCCGAGCCGTCACCGCAGCCAGCACACGGCCAGCTGGACACCATGCCTTTCCCGCAGCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 90 bp CCTGTCCCCGCGCTGCGCCCCGTTCTCCCACGCCCTTCCCGCCCATaGCACTCGGCACGTAAGCCCTGCAGCGCCTTTAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PVPALRPVLPRPSRP*HSARKPCSAFSSSS
Trigger: GCTGCTGCTGCTAAAGGCGCTGCAGGGCTTACGTGCCGAGTGGCATGGGCGGGAAGGGCGTGGGAGAACGGGGCGCAGCGCGGGGACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CCA 90 bp GCAGGGCCTCAGGCTCCAGGGACAGTCCAGGCTGCGGGAAAGGCATaGTGTCCAGCTGGCCGTGTGCTGGCTGCGGTGACGGCTCGGCGG +
Preference number: 5 (lower is better)
Translates to: AGPQAPGTVQAAGKA*CPAGRVLAAVTARR
Trigger: CCGCCGAGCCGTCACCGCAGCCAGCACACGGCCAGCTGGACACCATGCCTTTCCCGCAGCCTGGACTGTCCCTGGAGCCTGAGGCCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 90 bp CTGCGGGAAAGGCATGGTGTCCAGCTGGCCGTGTGCTGGCTGCGGTaGCGGCTCGGCGGGTGGCAGCACCACCAGGGTGGGAGTCATCCG +
Preference number: 5 (lower is better)
Translates to: LRERHGVQLAVCWLR*RLGGWQHHQGGSHP
Trigger: CGGATGACTCCCACCCTGGTGGTGCTGCCACCCGCCGAGCCGTCACCGCAGCCAGCACACGGCCAGCTGGACACCATGCCTTTCCCGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 90 bp CCTCCCAGTCGAGCAGGCGTCCCAGTGCTGCGGGGTCTGACAGGTTaGCCAGGCCCTGTGGGAAGCTGGCCAGCGCACCAGGGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: PPSRAGVPVLRGLTG*PGPVGSWPAHQGPG
Trigger: CCCTGGACCCTGGTGCGCTGGCCAGCTTCCCACAGGGCCTGGTCAACCTGTCAGACCCCGCAGCACTGGGACGCCTGCTCGACTGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 90 bp AGGCCCTGTGGGAAGCTGGCCAGCGCACCAGGGTCCAGGGCCAGTTaGGTGTTCGAAGCCTGGGTCAGAGGTCCCCGCAGAGCACGAACC +
Preference number: 5 (lower is better)
Translates to: RPCGKLASAPGSRAS*VFEAWVRGPRRART
Trigger: GGTTCGTGCTCTGCGGGGACCTCTGACCCAGGCTTCGAACACGCAACTGGCCCTGGACCCTGGTGCGCTGGCCAGCTTCCCACAGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CCA 90 bp CTGGCCAGCGCACCAGGGTCCAGGGCCAGTTGCGTGTTCGAAGCCTaGGTCAGAGGTCCCCGCAGAGCACGAACCAAGCGAGTGAGGGTC +
Preference number: 5 (lower is better)
Translates to: LASAPGSRASCVFEA*VRGPRRARTKRVRV
Trigger: GACCCTCACTCGCTTGGTTCGTGCTCTGCGGGGACCTCTGACCCAGGCTTCGAACACGCAACTGGCCCTGGACCCTGGTGCGCTGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 90 bp AGCAACTGCTGTTCTCCAGTCTCCCCTAGCCAGGCCCCAAGGCGCTaGAGGGCAGGCAGGGTAGCCTGGGAGTCAGTGCTGCAGACTCCG +
Preference number: 5 (lower is better)
Translates to: SNCCSPVSPSQAPRR*RAGRVAWESVLQTP
Trigger: CGGAGTCTGCAGCACTGACTCCCAGGCTACCCTGCCTGCCCTGCAGCGCCTTGGGGCCTGGCTAGGGGAGACTGGAGAACAGCAGTTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 90 bp GGCGCCTTGGCAGTTGTTGGCTTGGTAGGTCTCCGGGATGAGCACTaGACGCTCCGCGCGCAGATCTACACTCAGCTCGCGCAGCGCGCA +
Preference number: 5 (lower is better)
Translates to: GALAVVGLVGLRDEH*TLRAQIYTQLAQRA
Trigger: TGCGCGCTGCGCGAGCTGAGTGTAGATCTGCGCGCGGAGCGTTCAGTGCTCATCCCGGAGACCTACCAAGCCAACAACTGCCAAGGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 90 bp ACGCGCAGGCGCCTTGGCAGTTGTTGGCTTGGTAGGTCTCCGGGATaGGCACTGAACGCTCCGCGCGCAGATCTACACTCAGCTCGCGCA +
Preference number: 5 (lower is better)
Translates to: TRRRLGSCWLGRSPG*ALNAPRADLHSARA
Trigger: TGCGCGAGCTGAGTGTAGATCTGCGCGCGGAGCGTTCAGTGCTCATCCCGGAGACCTACCAAGCCAACAACTGCCAAGGCGCCTGCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CCA 90 bp CAGAGGTTCTGTGTGCCCCGCAGTCCAGTCCCTGTGACTGTGACCTaGGGGCCTGGTCCAGGGTATAGCACTAACAGGGCCTGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: QRFCVPRSPVPVTVT*GPGPGYSTNRACSQ
Trigger: CTGGGAGCAGGCCCTGTTAGTGCTATACCCTGGACCAGGCCCCCAGGTCACAGTCACAGGGACTGGACTGCGGGGCACACAGAACCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 90 bp CGATGCTCAGGGTGGCACCTTCTCTGCTTGGTTGAAGGGTTAAGATaGGGCCCGAGCCGCTCCAGGCCCCCGCTGGGAAGTCCACGGTTA +
Preference number: 5 (lower is better)
Translates to: RCSGWHLLCLVEGLR*GPSRSRPPLGSPRL
Trigger: TAACCGTGGACTTCCCAGCGGGGGCCTGGAGCGGCTCGGGCCTCATCTTAACCCTTCAACCAAGCAGAGAAGGTGCCACCCTGAGCATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CCA 90 bp AACAGGGCCTGCTCCCAGCGGCTGGCTCCCCCAGGTGGAGGCTCTTaGAACTTCAGCAAGAGCTCGGGCTCCCATATCACTTCAGCCAGA +
Preference number: 5 (lower is better)
Translates to: NRACSQRLAPPGGGS*NFSKSSGSHITSAR
Trigger: TCTGGCTGAAGTGATATGGGAGCCCGAGCTCTTGCTGAAGTTCCAAGAGCCTCCACCTGGGGGAGCCAGCCGCTGGGAGCAGGCCCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 90 bp ACGGCTCGGCGGGTGGCAGCACCACCAGGGTGGGAGTCATCCGCGTaGAACAGCGGGAATCAGAGCCAAATAGAAAGGCTTGCAGCTGAT +
Preference number: 5 (lower is better)
Translates to: TARRVAAPPGWESSA*NSGNQSQIERLAAD
Trigger: ATCAGCTGCAAGCCTTTCTATTTGGCTCTGATTCCCGCTGTTTCACGCGGATGACTCCCACCCTGGTGGTGCTGCCACCCGCCGAGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 72 bp GAGGCTGCCGCCTGCAGCTCCACTGCCACCCTGCGTTaGAGGCCCGCTGCCCAGGGAGCAGAAGCGGGGCCG +
Preference number: 6 (lower is better)
Translates to: EAAACSSTATLR*RPAAQGAEAGP
Trigger: CGGCCCCGCTTCTGCTCCCTGGGCAGCGGGCCTGCAACGCAGGGTGGCAGTGGAGCTGCAGGCGGCAGCCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CCA 72 bp ACAGCGCTAGCAGGCGCGCCAGCAGCGGGGGAGCTGTaGGTGGCAGACCCGGGAGGTCCCGCAGCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: TALAGAPAAGEL*VADPGGPAALR
Trigger: CCTCAGAGCTGCGGGACCTCCCGGGTCTGCCACCCACAGCTCCCCCGCTGCTGGCGCGCCTGCTAGCGCTGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 72 bp AGGCATGGTGTCCAGCTGGCCGTGTGCTGGCTGCGGTaGCGGCTCGGCGGGTGGCAGCACCACCAGGGTGGG +
Preference number: 6 (lower is better)
Translates to: RHGVQLAVCWLR*RLGGWQHHQGG
Trigger: CCCACCCTGGTGGTGCTGCCACCCGCCGAGCCGTCACCGCAGCCAGCACACGGCCAGCTGGACACCATGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 72 bp CGCCCTTCCCGCCCATGCCACTCGGCACGTAAGCCCTaGAGCGCCTTTAGCAGCAGCAGCGCGCGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: RPSRPCHSARKP*SAFSSSSARSG
Trigger: CCCGCTGCGCGCGCTGCTGCTGCTAAAGGCGCTGCAGGGCTTACGTGCCGAGTGGCATGGGCGGGAAGGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 72 bp GGGAAAGGCATGGTGTCCAGCTGGCCGTGTGCTGGCTaGGGTGACGGCTCGGCGGGTGGCAGCACCACCAGG +
Preference number: 6 (lower is better)
Translates to: GKGMVSSWPCAG*GDGSAGGSTTR
Trigger: CCTGGTGGTGCTGCCACCCGCCGAGCCGTCACCGCAGCCAGCACACGGCCAGCTGGACACCATGCCTTTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 72 bp CGAGCAGGCGTCCCAGTGCTGCGGGGTCTGACAGGTTaGCCAGGCCCTGTGGGAAGCTGGCCAGCGCACCAG +
Preference number: 6 (lower is better)
Translates to: RAGVPVLRGLTG*PGPVGSWPAHQ
Trigger: CTGGTGCGCTGGCCAGCTTCCCACAGGGCCTGGTCAACCTGTCAGACCCCGCAGCACTGGGACGCCTGCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CAA 90 bp CAGGCCCTGTGGGAAGCTGGCCAGCGCACCAGGGTCCAGGGCCAGTaGCGTGTTCGAAGCCTGGGTCAGAGGTCCCCGCAGAGCACGAAC +
Preference number: 6 (lower is better)
Translates to: QALWEAGQRTRVQGQ*RVRSLGQRSPQSTN
Trigger: GTTCGTGCTCTGCGGGGACCTCTGACCCAGGCTTCGAACACGCAACTGGCCCTGGACCCTGGTGCGCTGGCCAGCTTCCCACAGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 72 bp CTCCCAGTCGAGCAGGCGTCCCAGTGCTGCGGGGTCTaGCAGGTTGACCAGGCCCTGTGGGAAGCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LPVEQASQCCGV*QVDQALWEAGQ
Trigger: CTGGCCAGCTTCCCACAGGGCCTGGTCAACCTGTCAGACCCCGCAGCACTGGGACGCCTGCTCGACTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 72 bp TGGGGGCCTGGTCCAGGGTATAGCACTAACAGGGCCTaGTCCCAGCGGCTGGCTCCCCCAGGTGGAGGCTCT +
Preference number: 6 (lower is better)
Translates to: WGPGPGYSTNRA*SQRLAPPGGGS
Trigger: AGAGCCTCCACCTGGGGGAGCCAGCCGCTGGGAGCAGGCCCTGTTAGTGCTATACCCTGGACCAGGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CCA 72 bp CGGCAGCCGCACTCGGTGGCTACCATGTTGGGCACGTaGTGCGCGCTGATGCGCTCCTCGGACAGGCTGATG +
Preference number: 6 (lower is better)
Translates to: RQPHSVATMLGT*CALMRSSDRLM
Trigger: CATCAGCCTGTCCGAGGAGCGCATCAGCGCGCACCACGTGCCCAACATGGTAGCCACCGAGTGCGGCTGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CAA 72 bp TGGGAAGCTGGCCAGCGCACCAGGGTCCAGGGCCAGTaGCGTGTTCGAAGCCTGGGTCAGAGGTCCCCGCAG +
Preference number: 6 (lower is better)
Translates to: WEAGQRTRVQGQ*RVRSLGQRSPQ
Trigger: CTGCGGGGACCTCTGACCCAGGCTTCGAACACGCAACTGGCCCTGGACCCTGGTGCGCTGGCCAGCTTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CAA 72 bp TCGAGCAGGCGTCCCAGTGCTGCGGGGTCTGACAGGTaGACCAGGCCCTGTGGGAAGCTGGCCAGCGCACCA +
Preference number: 6 (lower is better)
Translates to: SSRRPSAAGSDR*TRPCGKLASAP
Trigger: TGGTGCGCTGGCCAGCTTCCCACAGGGCCTGGTCAACCTGTCAGACCCCGCAGCACTGGGACGCCTGCTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 72 bp TGTTCTCCAGTCTCCCCTAGCCAGGCCCCAAGGCGCTaGAGGGCAGGCAGGGTAGCCTGGGAGTCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: CSPVSPSQAPRR*RAGRVAWESVL
Trigger: CAGCACTGACTCCCAGGCTACCCTGCCTGCCCTGCAGCGCCTTGGGGCCTGGCTAGGGGAGACTGGAGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS GCA 72 bp CAGCCGCACTCGGTGGCTACCATGTTGGGCACGTGGTaGGCGCTGATGCGCTCCTCGGACAGGCTGATGAGC +
Preference number: 6 (lower is better)
Translates to: QPHSVATMLGTW*ALMRSSDRLMS
Trigger: GCTCATCAGCCTGTCCGAGGAGCGCATCAGCGCGCACCACGTGCCCAACATGGTAGCCACCGAGTGCGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CCA 72 bp GAGTCAGTGCTGCAGACTCCGAAGGTGGCCAGGTCTTaGGGTCCCCAGCGAGACTCCTGGACAGCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ESVLQTPKVARS*GPQRDSWTASR
Trigger: CCTGGAGGCTGTCCAGGAGTCTCGCTGGGGACCCCAAGACCTGGCCACCTTCGGAGTCTGCAGCACTGACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CAA 72 bp GGAGTCAGTGCTGCAGACTCCGAAGGTGGCCAGGTCTaGGGGTCCCCAGCGAGACTCCTGGACAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GVSAADSEGGQV*GSPARLLDSLQ
Trigger: CTGGAGGCTGTCCAGGAGTCTCGCTGGGGACCCCAAGACCTGGCCACCTTCGGAGTCTGCAGCACTGACTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 72 bp GGGTGGCACCTTCTCTGCTTGGTTGAAGGGTTAAGATaGGGCCCGAGCCGCTCCAGGCCCCCGCTGGGAAGT +
Preference number: 6 (lower is better)
Translates to: GWHLLCLVEGLR*GPSRSRPPLGS
Trigger: ACTTCCCAGCGGGGGCCTGGAGCGGCTCGGGCCTCATCTTAACCCTTCAACCAAGCAGAGAAGGTGCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CCA 72 bp TGTGTGCCCCGCAGTCCAGTCCCTGTGACTGTGACCTaGGGGCCTGGTCCAGGGTATAGCACTAACAGGGCC +
Preference number: 6 (lower is better)
Translates to: CVPRSPVPVTVT*GPGPGYSTNRA
Trigger: GGCCCTGTTAGTGCTATACCCTGGACCAGGCCCCCAGGTCACAGTCACAGGGACTGGACTGCGGGGCACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CAA 72 bp CTGCTCCCAGCGGCTGGCTCCCCCAGGTGGAGGCTCTaGGAACTTCAGCAAGAGCTCGGGCTCCCATATCAC +
Preference number: 6 (lower is better)
Translates to: LLPAAGSPRWRL*ELQQELGLPYH
Trigger: GTGATATGGGAGCCCGAGCTCTTGCTGAAGTTCCAAGAGCCTCCACCTGGGGGAGCCAGCCGCTGGGAGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CAA 72 bp CGGATTACGGTCAGACTGCGGCCACGCGCAGGCGCCTaGGCAGTTGTTGGCTTGGTAGGTCTCCGGGATGAG +
Preference number: 6 (lower is better)
Translates to: RITVRLRPRAGA*AVVGLVGLRDE
Trigger: CTCATCCCGGAGACCTACCAAGCCAACAACTGCCAAGGCGCCTGCGCGTGGCCGCAGTCTGACCGTAATCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CCA 72 bp TGCTCCCAGCGGCTGGCTCCCCCAGGTGGAGGCTCTTaGAACTTCAGCAAGAGCTCGGGCTCCCATATCACT +
Preference number: 6 (lower is better)
Translates to: CSQRLAPPGGGS*NFSKSSGSHIT
Trigger: AGTGATATGGGAGCCCGAGCTCTTGCTGAAGTTCCAAGAGCCTCCACCTGGGGGAGCCAGCCGCTGGGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 72 bp GCAGTTGTTGGCTTGGTAGGTCTCCGGGATGAGCACTaGACGCTCCGCGCGCAGATCTACACTCAGCTCGCG +
Preference number: 6 (lower is better)
Translates to: AVVGLVGLRDEH*TLRAQIYTQLA
Trigger: CGCGAGCTGAGTGTAGATCTGCGCGCGGAGCGTTCAGTGCTCATCCCGGAGACCTACCAAGCCAACAACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 72 bp CGCCTTGGCAGTTGTTGGCTTGGTAGGTCTCCGGGATaGGCACTGAACGCTCCGCGCGCAGATCTACACTCA +
Preference number: 6 (lower is better)
Translates to: RLGSCWLGRSPG*ALNAPRADLHS
Trigger: TGAGTGTAGATCTGCGCGCGGAGCGTTCAGTGCTCATCCCGGAGACCTACCAAGCCAACAACTGCCAAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 72 bp CGGGTGGCAGCACCACCAGGGTGGGAGTCATCCGCGTaGAACAGCGGGAATCAGAGCCAAATAGAAAGGCTT +
Preference number: 6 (lower is better)
Translates to: RVAAPPGWESSA*NSGNQSQIERL
Trigger: AAGCCTTTCTATTTGGCTCTGATTCCCGCTGTTTCACGCGGATGACTCCCACCCTGGTGGTGCTGCCACCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS TCA 72 bp CAGCGGGAATCAGAGCCAAATAGAAAGGCTTGCAGCTaGTCGATGCTCAGGGTGGCACCTTCTCTGCTTGGT +
Preference number: 6 (lower is better)
Translates to: QRESEPNRKACS*SMLRVAPSLLG
Trigger: ACCAAGCAGAGAAGGTGCCACCCTGAGCATCGATCAGCTGCAAGCCTTTCTATTTGGCTCTGATTCCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6
CDS CAA 72 bp CAGAGCTCATCTTCAAGGAAGATGAGGCCCCTGGTATaGGTGGCCAGGTTTTCAACCGCCTCAGGCTGTAAC +
Preference number: 6 (lower is better)
Translates to: QSSSSRKMRPLV*VARFSTASGCN
Trigger: GTTACAGCCTGAGGCGGTTGAAAACCTGGCCACCAATACCAGGGGCCTCATCTTCCTTGAAGATGAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000036016.6