Pregenerated sensors for AMFR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031751Ensembl transcript IDs: ENSMUST00000053766.14, ENSMUST00000143265.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGCAGCAGCAATGCAGTCGCAGGTCTCCACACAGCAGGCAGAACTaGGACAGGCCTCTTCCGGTAGGTAGAGCTGGGCAGGAGGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: MQQQCSRRSPHSRQN*DRPLPVGRAGQEAE Trigger: CTCAGCCTCCTGCCCAGCTCTACCTACCGGAAGAGGCCTGTCCCAGTTCTGCCTGCTGTGTGGAGACCTGCGACTGCATTGCTGCTGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR TCA 90 bp | AACCAAAGGAAAGGAAGAGGCGGCAGCCATGGGGGCAAGCTTCTGTaGTGCGAGAGCACCAGAGTGACGGAAGTGAAGCCAGCTGGGGAC | + |
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Preference number: 1 (lower is better) Translates to: NQRKGRGGSHGGKLL*CESTRVTEVKPAGD Trigger: GTCCCCAGCTGGCTTCACTTCCGTCACTCTGGTGCTCTCGCATCACAGAAGCTTGCCCCCATGGCTGCCGCCTCTTCCTTTCCTTTGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR GCA 90 bp | GGACTGGCCTCCTCCCTAAGCACAGCATTTAATCGTAGGCTACTTTaGCATAGTGGTGGTCAGGCTCCTGCTGCGCACCTTCTGACTGCT | + |
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Preference number: 1 (lower is better) Translates to: GLASSLSTAFNRRLL*HSGGQAPAAHLLTA Trigger: AGCAGTCAGAAGGTGCGCAGCAGGAGCCTGACCACCACTATGGCAAAGTAGCCTACGATTAAATGCTGTGCTTAGGGAGGAGGCCAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR GCA 90 bp | TCTTTCTACTCCAGGTACCAAACCAGTTCTTTCTACACCATGTCCTaGTGGTCTAGAGGTCCAGGCGCCTGTGGGACTGGCCTCCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: SFYSRYQTSSFYTMS*WSRGPGACGTGLLP Trigger: AGGGAGGAGGCCAGTCCCACAGGCGCCTGGACCTCTAGACCAGCAGGACATGGTGTAGAAAGAACTGGTTTGGTACCTGGAGTAGAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR CCA 90 bp | TTCTACTCCAGGTACCAAACCAGTTCTTTCTACACCATGTCCTGCTaGTCTAGAGGTCCAGGCGCCTGTGGGACTGGCCTCCTCCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: FYSRYQTSSFYTMSC*SRGPGACGTGLLPK Trigger: CTTAGGGAGGAGGCCAGTCCCACAGGCGCCTGGACCTCTAGACCAGCAGGACATGGTGTAGAAAGAACTGGTTTGGTACCTGGAGTAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR GCA 90 bp | TTTATTTTCATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTaGTTCCTCCTCCAAGTAAAACACAGGAGCGACCACGCCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: FIFMCSLERCQRQAQ*FLLQVKHRSDHALP Trigger: TGGGAGGGCGTGGTCGCTCCTGTGTTTTACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACATGAAAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR GCA 90 bp | TACAAAGGATTAAATTTGTCAGCTGTCCACACACTAAAGACCACATaGTTTATGCAGCAGCAATGCAGTCGCAGGTCTCCACACAGCAGG | + |
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Preference number: 1 (lower is better) Translates to: YKGLNLSAVHTLKTT*FMQQQCSRRSPHSR Trigger: CCTGCTGTGTGGAGACCTGCGACTGCATTGCTGCTGCATAAAGCATGTGGTCTTTAGTGTGTGGACAGCTGACAAATTTAATCCTTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR TCA 90 bp | TATCCTATGATTGCATGTTTCAAATCCTTAAATACGTGGAGAATTTaGGCCGATCTGGGACCGAGTCTGCTTGAGGCATGTGGATTATTC | + |
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Preference number: 1 (lower is better) Translates to: YPMIACFKSLNTWRI*ADLGPSLLEACGLF Trigger: GAATAATCCACATGCCTCAAGCAGACTCGGTCCCAGATCGGCTCAAATTCTCCACGTATTTAAGGATTTGAAACATGCAATCATAGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR GCA 90 bp | CAAGTCCAGTCAACACCAGAAGAGGCCATGCCTAGAGTTAAAATGTaGAATGTTTCTAAGGGGAAGAGAAATGTCACAAAGAAAGTATTA | + |
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Preference number: 1 (lower is better) Translates to: QVQSTPEEAMPRVKM*NVSKGKRNVTKKVL Trigger: TAATACTTTCTTTGTGACATTTCTCTTCCCCTTAGAAACATTGCACATTTTAACTCTAGGCATGGCCTCTTCTGGTGTTGACTGGACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTAGGGGGCAAGCTTCTGTaGTGCGAGAGCACCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: MCSLERCQRQAQCFLLQVGGKLL*CESTRV Trigger: CACTCTGGTGCTCTCGCATCACAGAAGCTTGCCCCC...TACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR GCA 90 bp | CGTTTAATGAGACCCACAGGAACAAAAGCAGGGAACTCAAGGGCTCCAGGGACATGGTCAGGCTCCTGCTaGGCACCTTCTGACTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: RLMRPTGTKAGNSRAPGTWSGSC*APSDCC Trigger: ACAGCAGTCAGAAGGTGCGCAGCAGGAGCCTGACCA...TGTCCCTGGAGCCCTTGAGTTCCCTGCTTTTGTTCCTGTGGGTCTCATTAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTAAAACACAGGAGCGACACACACAGAGCAGCGTaGGACTCCACTGCCCCCACA | + |
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Preference number: 2 (lower is better) Translates to: RCQRQAQCFLLQVKHRSDTHRAA*DSTAPT Trigger: TGTGGGGGCAGTGGAGTCCCACGCTGCTCTGTGTGT...GTCGCTCCTGTGTTTTACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTACTGCTGCGCACCTTCTaGCTGCTGTTATGCACCCTC | + |
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Preference number: 2 (lower is better) Translates to: MCSLERCQRQAQCFLLQVLLRTF*LLLCTL Trigger: GAGGGTGCATAACAGCAGTCAGAAGGTGCGCAGCAG...TACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR TCA 90 bp | CAGCCATGGGGGCAAGCTTCTGTGATGCGAGAGCACCAGAGTGACGGAAGTGAAGGCTCAGATTGGTCCTaGATGTTAAGGGCAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: QPWGQASVMREHQSDGSEGSDWS*MLRAEK Trigger: CTTTTCTGCCCTTAACATTCAGGACCAATCTGAGCC...TTCACTTCCGTCACTCTGGTGCTCTCGCATCACAGAAGCTTGCCCCCATGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTATACACCATGTCCTGCTaGTCTAGAGGTCCAGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: MCSLERCQRQAQCFLLQVYTMSC*SRGPGA Trigger: GGCGCCTGGACCTCTAGACCAGCAGGACATGGTGTA...TACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR GCA 90 bp | TATATCAAAACAGAAATTCAAACTAGCTGCTGCAGGCAGGCGAGCGCCCCAGTGTTTATGCAGCAGCAATaGAGTCGCAGGTCTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: YIKTEIQTSCCRQASAPVFMQQQ*SRRSPH Trigger: GTGTGGAGACCTGCGACTGCATTGCTGCTGCATAAA...CACTGGGGCGCTCGCCTGCCTGCAGCAGCTAGTTTGAATTTCTGTTTTGATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR GCA 90 bp | TTCAACATCCTCTGTTTCCGTTTAATGAGACCCACAGGAACAAAAGCAGGGAACAGGGCCTCCTCATTCTaGAGCCCTGAGCTTCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: FNILCFRLMRPTGTKAGNRASSF*SPELPL Trigger: AAGAGGAAGCTCAGGGCTGCAGAATGAGGAGGCCCT...GTTCCCTGCTTTTGTTCCTGTGGGTCTCATTAAACGGAAACAGAGGATGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR GCA 90 bp | TTCCCCTTTATTTTCATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTGCAGACCACATGCTTTATaGAGCAGCAATGCAGTCGCA | + |
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Preference number: 2 (lower is better) Translates to: FPFIFMCSLERCQRQAQCRPHAL*SSNAVA Trigger: TGCGACTGCATTGCTGCTGCATAAAGCATGTGGTCT...GCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACATGAAAATAAAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR GCA 90 bp | TTCTACTCCAGGTACCAAACCAGTTCTTTCTACACCATGTCCTGCTGGTCTAGAACACTAAAGACCACATaGTTTATGCAGCAGCAATGC | + |
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Preference number: 2 (lower is better) Translates to: FYSRYQTSSFYTMSCWSRTLKTT*FMQQQC Trigger: GCATTGCTGCTGCATAAAGCATGTGGTCTTTAGTGT...TCTAGACCAGCAGGACATGGTGTAGAAAGAACTGGTTTGGTACCTGGAGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR GCA 90 bp | GATCCGTGCTTCCTTCCAGCTGTGGTGCTAAAATACTCAACATCTGCTGTGGTTCCTAGAGTTAAAATGTaGAATGTTTCTAAGGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: DPCFLPAVVLKYSTSAVVPRVKM*NVSKGK Trigger: CTTCCCCTTAGAAACATTGCACATTTTAACTCTAGG...AACCACAGCAGATGTTGAGTATTTTAGCACCACAGCTGGAAGGAAGCACGGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR TCA 72 bp | GCCATAGTGGTGGTCAGGCTCCTGCTGCGCACCTTCTaGCTGCTGTTATGCACCCTCCCCAAGATCCGTGCT | + |
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Preference number: 3 (lower is better) Translates to: AIVVVRLLLRTF*LLLCTLPKIRA Trigger: AGCACGGATCTTGGGGAGGGTGCATAACAGCAGTCAGAAGGTGCGCAGCAGGAGCCTGACCACCACTATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR TCA 72 bp | AAAGGAAGAGGCGGCAGCCATGGGGGCAAGCTTCTGTaGTGCGAGAGCACCAGAGTGACGGAAGTGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: KGRGGSHGGKLL*CESTRVTEVKP Trigger: TGGCTTCACTTCCGTCACTCTGGTGCTCTCGCATCACAGAAGCTTGCCCCCATGGCTGCCGCCTCTTCCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR GCA 72 bp | TCCAGGTACCAAACCAGTTCTTTCTACACCATGTCCTaGTGGTCTAGAGGTCCAGGCGCCTGTGGGACTGGC | + |
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Preference number: 3 (lower is better) Translates to: SRYQTSSFYTMS*WSRGPGACGTG Trigger: GCCAGTCCCACAGGCGCCTGGACCTCTAGACCAGCAGGACATGGTGTAGAAAGAACTGGTTTGGTACCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR GCA 72 bp | TCCTCCCTAAGCACAGCATTTAATCGTAGGCTACTTTaGCATAGTGGTGGTCAGGCTCCTGCTGCGCACCTT | + |
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Preference number: 3 (lower is better) Translates to: SSLSTAFNRRLL*HSGGQAPAAHL Trigger: AAGGTGCGCAGCAGGAGCCTGACCACCACTATGGCAAAGTAGCCTACGATTAAATGCTGTGCTTAGGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR GCA 72 bp | ATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTaGTTCCTCCTCCAAGTAAAACACAGGAGCGACCAC | + |
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Preference number: 3 (lower is better) Translates to: MCSLERCQRQAQ*FLLQVKHRSDH Trigger: GTGGTCGCTCCTGTGTTTTACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| 3UTR-3UTR CAA 90 bp | GATTGCATGTTTCAAATCCTTAAATACGTGGAGAATTTGAGCCGATCTGGGACCTACAAAGGATTAAATTaGTCAGCTGTCCACACACTA | + |
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Preference number: 3 (lower is better) Translates to: DCMFQILKYVENLSRSGTYKGLN*SAVHTL Trigger: TAGTGTGTGGACAGCTGACAAATTTAATCCTTTGTA...GGTCCCAGATCGGCTCAAATTCTCCACGTATTTAAGGATTTGAAACATGCAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR GCA 90 bp | TGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTAAAACACAGGAGCGACCACAGGCGCGCCTCGGGCTaGAGTGGGGCCGTTAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: CQRQAQCFLLQVKHRSDHRRASG*SGAVSG Trigger: GCCGCTAACGGCCCCACTGCAGCCCGAGGCGCGCCT...GTGGTCGCTCCTGTGTTTTACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR TCA 90 bp | ATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTAGCAAGGCCAGGCCGCTaGGGCCCGTGTAGGTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: MCSLERCQRQAQCFLLQVARPGR*GPCRCG Trigger: TCCGCACCTACACGGGCCTCAGCGGCCTGGCCTTGC...TACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR GCA 90 bp | TGGTGGTCAGGCTCCTGCTGCGCACCTTCTGACTGCTGTTATGCACCCTCCCCAAGCATGTGGATGTGGTaGATGAGGTCCAGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: WWSGSCCAPSDCCYAPSPSMWMW*MRSRDR Trigger: CCTGTCCCTGGACCTCATGCACCACATCCACATGCT...TGGGGAGGGTGCATAACAGCAGTCAGAAGGTGCGCAGCAGGAGCCTGACCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CCA 90 bp | TGGTGGTCAGGCTCCTGCTGCGCACCTTCTGACTGCTGTTATGCACCCTCCCCAGACAGGACTCTCCCATaGCTGCTCATTGGAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: WWSGSCCAPSDCCYAPSPDRTLP*LLIGVV Trigger: CACCACTCCAATGAGCAGCCATGGGAGAGTCCTGTC...TGGGGAGGGTGCATAACAGCAGTCAGAAGGTGCGCAGCAGGAGCCTGACCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CCA 90 bp | TGGTGGTCAGGCTCCTGCTGCGCACCTTCTGACTGCTGTTATGCACCCTCCCCATCTCATCAGCAGACTTaGAGAAGCGGCTTCCACGGG | + |
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Preference number: 4 (lower is better) Translates to: WWSGSCCAPSDCCYAPSPSHQQT*RSGFHG Trigger: CCCGTGGAAGCCGCTTCTCCAAGTCTGCTGATGAGA...TGGGGAGGGTGCATAACAGCAGTCAGAAGGTGCGCAGCAGGAGCCTGACCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR TCA 90 bp | GATCCGTGCTTCCTTCCAGCTGTGGTGCTAAAATACTCAACATCTGCTGTGGTTGGGCGCGGTAGGCGCTaGCGATGGTGCCCAGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: DPCFLPAVVLKYSTSAVVGRGRR*RWCPAR Trigger: CCTTGCTGGGCACCATCGTCAGCGCCTACCGCGCCC...AACCACAGCAGATGTTGAGTATTTTAGCACCACAGCTGGAAGGAAGCACGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR TCA 90 bp | TGGTGGTCAGGCTCCTGCTGCGCACCTTCTGACTGCTGTTATGCACCCTCCCCAACGTCCCTTCGTGGTTaGGGTCCCAGAGGTGAATTA | + |
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Preference number: 4 (lower is better) Translates to: WWSGSCCAPSDCCYAPSPTSLRG*GPRGEL Trigger: TAATTCACCTCTGGGACCTCAACCACGAAGGGACGT...TGGGGAGGGTGCATAACAGCAGTCAGAAGGTGCGCAGCAGGAGCCTGACCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR GCA 90 bp | CAGCCATGGGGGCAAGCTTCTGTGATGCGAGAGCACCAGAGTGACGGAAGTGAACGGGGTCAGAGGATGTaGCTTCAGAAGGGAGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: QPWGQASVMREHQSDGSERGQRM*LQKGGV Trigger: GACTCCTCCCTTCTGAAGGCACATCCTCTGACCCCG...TTCACTTCCGTCACTCTGGTGCTCTCGCATCACAGAAGCTTGCCCCCATGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR TCA 90 bp | CAGCCATGGGGGCAAGCTTCTGTGATGCGAGAGCACCAGAGTGACGGAAGTGAATCCAGGTTCTCTCCTTaGTGGTCTTCCCTGGCACGA | + |
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Preference number: 4 (lower is better) Translates to: QPWGQASVMREHQSDGSESRFSP*WSSLAR Trigger: TCGTGCCAGGGAAGACCATCAAGGAGAGAACCTGGA...TTCACTTCCGTCACTCTGGTGCTCTCGCATCACAGAAGCTTGCCCCCATGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR GCA 90 bp | CAGCCATGGGGGCAAGCTTCTGTGATGCGAGAGCACCAGAGTGACGGAAGTGAACCTGCCTTCGGCAGCTaGTACAGGAACCAAGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: QPWGQASVMREHQSDGSEPAFGS*YRNQVL Trigger: GAGAACTTGGTTCCTGTAGCAGCTGCCGAAGGCAGG...TTCACTTCCGTCACTCTGGTGCTCTCGCATCACAGAAGCTTGCCCCCATGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CCA 90 bp | TATATCAAAACAGAAATTCAAACTAGCTGCTGCAGGCAGGCGAGCGCCCCAGTGCCTCCAGGTCAGGGCTaGGCCTCTCCACTGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: YIKTEIQTSCCRQASAPVPPGQG*ASPLGC Trigger: ACAGCCCAGTGGAGAGGCCCAGCCCTGACCTGGAGG...CACTGGGGCGCTCGCCTGCCTGCAGCAGCTAGTTTGAATTTCTGTTTTGATATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR TCA 90 bp | TGGTGGTCAGGCTCCTGCTGCGCACCTTCTGACTGCTGTTATGCACCCTCCCCAGTGGGGAAAGGTACTTaGATCCGTCCTTCTAAGATG | + |
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Preference number: 4 (lower is better) Translates to: WWSGSCCAPSDCCYAPSPVGKGT*IRPSKM Trigger: CATCTTAGAAGGACGGATTCAAGTACCTTTCCCCAC...TGGGGAGGGTGCATAACAGCAGTCAGAAGGTGCGCAGCAGGAGCCTGACCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CCA 90 bp | TTCAACATCCTCTGTTTCCGTTTAATGAGACCCACAGGAACAAAAGCAGGGAACTCCGACAGCAGGTACTaGGCCACGTCGCGGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: FNILCFRLMRPTGTKAGNSDSRY*ATSRAR Trigger: CCGGGCCCGCGACGTGGCCCAGTACCTGCTGTCGGA...GTTCCCTGCTTTTGTTCCTGTGGGTCTCATTAAACGGAAACAGAGGATGTTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CCA 90 bp | CAGCCATGGGGGCAAGCTTCTGTGATGCGAGAGCACCAGAGTGACGGAAGTGAACCCATGGCTGCTCATTaGAGTGGTGGGAGAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: QPWGQASVMREHQSDGSEPMAAH*SGGRKG Trigger: TCCTTTTCTCCCACCACTCCAATGAGCAGCCATGGG...TTCACTTCCGTCACTCTGGTGCTCTCGCATCACAGAAGCTTGCCCCCATGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR TCA 90 bp | CCAGTTGAACAGCATTATAAACCCCAACCCAAACGGCACACACAGAGCAGCGTGTGTGGATGTGGTGCATaGGGTCCAGGGACAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: PVEQHYKPQPKRHTQSSVCGCGA*GPGTGE Trigger: CTCTCCTGTCCCTGGACCTCATGCACCACATCCACA...CACGCTGCTCTGTGTGTGCCGTTTGGGTTGGGGTTTATAATGCTGTTCAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR GCA 90 bp | CGTTTAATGAGACCCACAGGAACAAAAGCAGGGAACTCAAGGGCTCCAGGGACAGGACTCTCCCATGGCTaGTCATTGGAGTGGTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RLMRPTGTKAGNSRAPGTGLSHG*SLEWWE Trigger: CTCCCACCACTCCAATGAGCAGCCATGGGAGAGTCC...TGTCCCTGGAGCCCTTGAGTTCCCTGCTTTTGTTCCTGTGGGTCTCATTAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CCA 90 bp | TTCCCCTTTATTTTCATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTGCTGTAGGTGCGGAGGCTaGGCCACGGGAAGCGCTCGA | + |
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Preference number: 4 (lower is better) Translates to: FPFIFMCSLERCQRQAQCCRCGG*ATGSAR Trigger: TCGAGCGCTTCCCGTGGCCCAGCCTCCGCACCTACA...GCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACATGAAAATAAAGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR TCA 90 bp | CCAGTTGAACAGCATTATAAACCCCAACCCAAACGGCACACACAGAGCAGCGTGGAGACTCTGCAGCCATaGAAGCCAAGGTGTGCATGC | + |
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Preference number: 4 (lower is better) Translates to: PVEQHYKPQPKRHTQSSVETLQP*KPRCAC Trigger: GCATGCACACCTTGGCTTTCATGGCTGCAGAGTCTC...CACGCTGCTCTGTGTGTGCCGTTTGGGTTGGGGTTTATAATGCTGTTCAACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR TCA 90 bp | CAGCCATGGGGGCAAGCTTCTGTGATGCGAGAGCACCAGAGTGACGGAAGTGAATCGAAGTGGAAGAAGTaGTTGTGCTGGTTCAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: QPWGQASVMREHQSDGSESKWKK*LCWFKR Trigger: TCGCTTGAACCAGCACAATCACTTCTTCCACTTCGA...TTCACTTCCGTCACTCTGGTGCTCTCGCATCACAGAAGCTTGCCCCCATGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR TCA 90 bp | CGTTTAATGAGACCCACAGGAACAAAAGCAGGGAACTCAAGGGCTCCAGGGACAGCCATGGCATTTAGCTaGGAGTTGCTTGCCTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: RLMRPTGTKAGNSRAPGTAMAFS*ELLACV Trigger: CACGCAGGCAAGCAACTCTCAGCTAAATGCCATGGC...TGTCCCTGGAGCCCTTGAGTTCCCTGCTTTTGTTCCTGTGGGTCTCATTAAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CCA 90 bp | AGGTGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTAAAACACAGGAGCGACGTCATCTGGAGGTCCTaGAGCACAAGGTGGTACGGG | + |
|
Preference number: 4 (lower is better) Translates to: RCQRQAQCFLLQVKHRSDVIWRS*STRWYG Trigger: CCCGTACCACCTTGTGCTCCAGGACCTCCAGATGAC...GTCGCTCCTGTGTTTTACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | TATATCAAAACAGAAATTCAAACTAGCTGCTGCAGGCAGGCGAGCGCCCCAGTGACGGAGCGTGTCATCTaGAGGTCCTGGAGCACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YIKTEIQTSCCRQASAPVTERVI*RSWSTR Trigger: CCTTGTGCTCCAGGACCTCCAGATGACACGCTCCGT...CACTGGGGCGCTCGCCTGCCTGCAGCAGCTAGTTTGAATTTCTGTTTTGATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | TTATTTTCATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTGCTTCCTCCGCTGGGCCTCTCCACTaGGCTGTTCAGTGCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSCAAWKGVKDKLSASSAGPLH*AVQCRP Trigger: AGGCCTGCACTGAACAGCCCAGTGGAGAGGCCCAGC...GGAGGAAGCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACATGAAAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | TATATCAAAACAGAAATTCAAACTAGCTGCTGCAGGCAGGCGAGCGCCCCAGTGAGGACTGAGGTCCAGTaGTACACGCTCCGTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YIKTEIQTSCCRQASAPVRTEVQ*YTLRLD Trigger: GTCCAGACGGAGCGTGTACCACTGGACCTCAGTCCT...CACTGGGGCGCTCGCCTGCCTGCAGCAGCTAGTTTGAATTTCTGTTTTGATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR TCA 90 bp | CAGCCATGGGGGCAAGCTTCTGTGATGCGAGAGCACCAGAGTGACGGAAGTGAACACAGTCATCATTATTaGCAGCTAGTTCCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QPWGQASVMREHQSDGSEHSHHY*QLVPLE Trigger: CTCCAGAGGAACTAGCTGTCAATAATGATGACTGTG...TTCACTTCCGTCACTCTGGTGCTCTCGCATCACAGAAGCTTGCCCCCATGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR GCA 90 bp | CCTACTCCCAACAAGTCCAGTCAACACCAGAAGAGGCCATGCCTAGAGTTAAAAGACACAGCAGACGACTaGCAGTCCACAGCAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTPNKSSQHQKRPCLELKDTADD*QSTAGE Trigger: CTCTCCTGCTGTGGACTGGCAGTCGTCTGCTGTGTC...TTTTAACTCTAGGCATGGCCTCTTCTGGTGTTGACTGGACTTGTTGGGAGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | AGGTGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTAAAACACAGGAGCGACTCCTTGCAGCCTGCATaGAGTCCCAGCAGATTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RCQRQAQCFLLQVKHRSDSLQPA*SPSRLH Trigger: GTGCAATCTGCTGGGACTCCATGCAGGCTGCAAGGA...GTCGCTCCTGTGTTTTACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | CGTTTAATGAGACCCACAGGAACAAAAGCAGGGAACTCAAGGGCTCCAGGGACATATCCGACCGCTGCGTaGGGAAAGGTACTTGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RLMRPTGTKAGNSRAPGTYPTAA*GKVLES Trigger: GGATTCAAGTACCTTTCCCCACGCAGCGGTCGGATA...TGTCCCTGGAGCCCTTGAGTTCCCTGCTTTTGTTCCTGTGGGTCTCATTAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR TCA 90 bp | GATCCGTGCTTCCTTCCAGCTGTGGTGCTAAAATACTCAACATCTGCTGTGGTTCATGTGTGTAGCCTGTaGCACAGCAGACGACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DPCFLPAVVLKYSTSAVVHVCSL*HSRRLP Trigger: TGGCAGTCGTCTGCTGTGTCACAGGCTACACACATG...AACCACAGCAGATGTTGAGTATTTTAGCACCACAGCTGGAAGGAAGCACGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR TCA 90 bp | TTCAACATCCTCTGTTTCCGTTTAATGAGACCCACAGGAACAAAAGCAGGGAACCCTCTAGGCGAGGACTaGGGTCCAGTGGTACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: FNILCFRLMRPTGTKAGNPLGED*GPVVHA Trigger: AGCGTGTACCACTGGACCTCAGTCCTCGCCTAGAGG...GTTCCCTGCTTTTGTTCCTGTGGGTCTCATTAAACGGAAACAGAGGATGTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR TCA 90 bp | GATCCGTGCTTCCTTCCAGCTGTGGTGCTAAAATACTCAACATCTGCTGTGGTTCGAAGGCAGGAGTTGTaGAAAAGATGTCCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DPCFLPAVVLKYSTSAVVRRQEL*KRCPQG Trigger: GCCCTGTGGACATCTTTTTCACAACTCCTGCCTTCG...AACCACAGCAGATGTTGAGTATTTTAGCACCACAGCTGGAAGGAAGCACGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR TCA 90 bp | CGTTTAATGAGACCCACAGGAACAAAAGCAGGGAACTCAAGGGCTCCAGGGACAGTGCATCACTTCAACTaGAAAACTTGGCAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLMRPTGTKAGNSRAPGTVHHFN*KTWQPA Trigger: AGCTGGCTGCCAAGTTTTTCAGTTGAAGTGATGCAC...TGTCCCTGGAGCCCTTGAGTTCCCTGCTTTTGTTCCTGTGGGTCTCATTAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | CCAGTTGAACAGCATTATAAACCCCAACCCAAACGGCACACACAGAGCAGCGTGTTGCAACAGCAAACCTaGCTTCCATGTTTCCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PVEQHYKPQPKRHTQSSVLQQQT*LPCFLP Trigger: TGGTAGGAAACATGGAAGCCAGGTTTGCTGTTGCAA...CACGCTGCTCTGTGTGTGCCGTTTGGGTTGGGGTTTATAATGCTGTTCAACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR TCA 90 bp | GATTGCATGTTTCAAATCCTTAAATACGTGGAGAATTTGAGCCGATCTGGGACCAGGGAGGAGTCTCTCTaGGGCCCCATCATCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DCMFQILKYVENLSRSGTREESL*GPIIFR Trigger: TCTGAAGATGATGGGGCCTCAGAGAGACTCCTCCCT...GGTCCCAGATCGGCTCAAATTCTCCACGTATTTAAGGATTTGAAACATGCAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR GCA 90 bp | TGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTAAAACACAGGAGCGACCACGGAGTCCCAGCAGATTaGACAGTCATCATTATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: CQRQAQCFLLQVKHRSDHGVPAD*TVIIID Trigger: GTCAATAATGATGACTGTGCAATCTGCTGGGACTCC...GTGGTCGCTCCTGTGTTTTACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR GCA 90 bp | TTCTACTCCAGGTACCAAACCAGTTCTTTCTACACCATGTCCTGCTGGTCTAGAAGTTTCCTTGCAGCCTaGATGGAGTCCCAGCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: FYSRYQTSSFYTMSCWSRSFLAA*MESQQI Trigger: AATCTGCTGGGACTCCATGCAGGCTGCAAGGAAACT...TCTAGACCAGCAGGACATGGTGTAGAAAGAACTGGTTTGGTACCTGGAGTAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | TGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTAAAACACAGGAGCGACCACCCGAACACAATACACTaGATAAGCTTAGCCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CQRQAQCFLLQVKHRSDHPNTIH*ISLATN Trigger: GTTGGTGGCTAAGCTTATCCAGTGTATTGTGTTCGG...GTGGTCGCTCCTGTGTTTTACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | TTCAACATCCTCTGTTTCCGTTTAATGAGACCCACAGGAACAAAAGCAGGGAACAACAGCATGTGGATGTaGTGCATGAGGTCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FNILCFRLMRPTGTKAGNNSMWM*CMRSRD Trigger: GTCCCTGGACCTCATGCACCACATCCACATGCTGTT...GTTCCCTGCTTTTGTTCCTGTGGGTCTCATTAAACGGAAACAGAGGATGTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | CCTACTCCCAACAAGTCCAGTCAACACCAGAAGAGGCCATGCCTAGAGTTAAAACCAAATAACAGCATGTaGATGTGGTGCATGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PTPNKSSQHQKRPCLELKPNNSM*MWCMRS Trigger: GGACCTCATGCACCACATCCACATGCTGTTATTTGG...TTTTAACTCTAGGCATGGCCTCTTCTGGTGTTGACTGGACTTGTTGGGAGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | TATATCAAAACAGAAATTCAAACTAGCTGCTGCAGGCAGGCGAGCGCCCCAGTGGAATCTGATGAGCCATaGCATTTAGCTGAGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YIKTEIQTSCCRQASAPVESDEP*HLAESC Trigger: GCAACTCTCAGCTAAATGCCATGGCTCATCAGATTC...CACTGGGGCGCTCGCCTGCCTGCAGCAGCTAGTTTGAATTTCTGTTTTGATATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR GCA 90 bp | GCCATGCCTAGAGTTAAAATGTGCAATGTTTCTAAGGGGAAGAGAAATGTCACAACAGGGCAGTTTCCTTaGAGCCTGCATGGAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AMPRVKMCNVSKGKRNVTTGQFP*SLHGVP Trigger: TGGGACTCCATGCAGGCTGCAAGGAAACTGCCCTGT...TGTGACATTTCTCTTCCCCTTAGAAACATTGCACATTTTAACTCTAGGCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CCA 90 bp | TATATCAAAACAGAAATTCAAACTAGCTGCTGCAGGCAGGCGAGCGCCCCAGTGAGACATTCTGCATGTTaGACAAGAGGTGTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: YIKTEIQTSCCRQASAPVRHSAC*TRGVLF Trigger: GAACAAGACACCTCTTGTCCAACATGCAGAATGTCT...CACTGGGGCGCTCGCCTGCCTGCAGCAGCTAGTTTGAATTTCTGTTTTGATATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | GATCCGTGCTTCCTTCCAGCTGTGGTGCTAAAATACTCAACATCTGCTGTGGTTTGCTCATTGGAGTGGTaGGAGAAAAGGAAAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: DPCFLPAVVLKYSTSAVVCSLEW*EKRKGI Trigger: AATACCTTTCCTTTTCTCCCACCACTCCAATGAGCA...AACCACAGCAGATGTTGAGTATTTTAGCACCACAGCTGGAAGGAAGCACGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR GCA 90 bp | ATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTAATTCAAATCTGTCTTTaGAGAGCTGAACCATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MCSLERCQRQAQCFLLQVIQICL*RAEPSD Trigger: ATCTGATGGTTCAGCTCTGCAAAGACAGATTTGAAT...TACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CCA 90 bp | GCCATGCCTAGAGTTAAAATGTGCAATGTTTCTAAGGGGAAGAGAAATGTCACAGGCTGCTCATTGGAGTaGTGGGAGAAAAGGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AMPRVKMCNVSKGKRNVTGCSLE*WEKRKG Trigger: ACCTTTCCTTTTCTCCCACCACTCCAATGAGCAGCC...TGTGACATTTCTCTTCCCCTTAGAAACATTGCACATTTTAACTCTAGGCATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR GCA 90 bp | GCCATGCCTAGAGTTAAAATGTGCAATGTTTCTAAGGGGAAGAGAAATGTCACACACAAGAAGAGACTCTaGAGCCATGAAAGCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AMPRVKMCNVSKGKRNVTHKKRL*SHESQG Trigger: ACCTTGGCTTTCATGGCTGCAGAGTCTCTTCTTGTG...TGTGACATTTCTCTTCCCCTTAGAAACATTGCACATTTTAACTCTAGGCATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR GCA 90 bp | CAGCATTATAAACCACGCCCCTCCCAGTTGAACAGCATTATAAACCCCAACCCAAGAATGTTGGTAGTGTaGATCACTTCAACTGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QHYKPRPSQLNSIINPNPRMLVV*ITSTEK Trigger: TTTTTCAGTTGAAGTGATGCACACTACCAACATTCT...TGGGTTGGGGTTTATAATGCTGTTCAACTGGGAGGGGCGTGGTTTATAATGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR TCA 90 bp | TTCAACATCCTCTGTTTCCGTTTAATGAGACCCACAGGAACAAAAGCAGGGAACTTGAGGTCCCAGAGGTaGATTACATATCTTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FNILCFRLMRPTGTKAGNLRSQR*ITYLKI Trigger: GATTTTAAGATATGTAATTCACCTCTGGGACCTCAA...GTTCCCTGCTTTTGTTCCTGTGGGTCTCATTAAACGGAAACAGAGGATGTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR TCA 90 bp | GCCATGCCTAGAGTTAAAATGTGCAATGTTTCTAAGGGGAAGAGAAATGTCACATATCTTAAAATCACATaGGCTGTTCTCACGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: AMPRVKMCNVSKGKRNVTYLKIT*AVLTVT Trigger: TGTGACCGTGAGAACAGCTCATGTGATTTTAAGATA...TGTGACATTTCTCTTCCCCTTAGAAACATTGCACATTTTAACTCTAGGCATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR TCA 90 bp | CCAGCTGTGGTGCTAAAATACTCAACATCTGCTGTGGTTTATATCAAAACAGAATCCAAAACTTGTCTTTaGGATGCTGTCTTTCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PAVVLKYSTSAVVYIKTESKTCL*DAVFHS Trigger: TGAGTGAAAGACAGCATCTCAAAGACAAGTTTTGGA...TTCTGTTTTGATATAAACCACAGCAGATGTTGAGTATTTTAGCACCACAGCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS GCA 90 bp | TCCCTCCTCCAGGTCAGGGCTGGGCCTCTCCACTGGGCTGTTCAGTaGAGGCCTCAGGCTATCCGACCGCTGCGTGGGGAAAGGTACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLQVRAGPLHWAVQ*RPQAIRPLRGERYL Trigger: CAAGTACCTTTCCCCACGCAGCGGTCGGATAGCCTGAGGCCTGCACTGAACAGCCCAGTGGAGAGGCCCAGCCCTGACCTGGAGGAGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS CCA 90 bp | CACGCTCCGTCTGGACAGAAGCTTCTCCCTCCTCCAGGTCAGGGCTaGGCCTCTCCACTGGGCTGTTCAGTGCAGGCCTCAGGCTATCCG | + |
|
Preference number: 5 (lower is better) Translates to: HAPSGQKLLPPPGQG*ASPLGCSVQASGYP Trigger: CGGATAGCCTGAGGCCTGCACTGAACAGCCCAGTGGAGAGGCCCAGCCCTGACCTGGAGGAGGGAGAAGCTTCTGTCCAGACGGAGCGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS GCA 90 bp | CGGCTGCCAGCATCCTTCGGCGCAGGGTCACGGGGTCAGAGGATGTaGCTTCAGAAGGGAGGAGTCTCTCTGAGGCCCCATCATCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLPASFGAGSRGQRM*LQKGGVSLRPHHLQ Trigger: CTGAAGATGATGGGGCCTCAGAGAGACTCCTCCCTTCTGAAGGCACATCCTCTGACCCCGTGACCCTGCGCCGAAGGATGCTGGCAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTCAGGCTCCTGCTGCGCACCTTCTGACTGCTGTTATGCACCCTCCCCATCCCATGGCTGCTCATaGGAGTGGTGGGAGAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WWSGSCCAPSDCCYAPSPSHGCS*EWWEKR Trigger: CCTTTTCTCCCACCACTCCAATGAGCAGCCATGGGA...TGGGGAGGGTGCATAACAGCAGTCAGAAGGTGCGCAGCAGGAGCCTGACCACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS TCA 90 bp | CTTGGCAGCCAGCTTGCAATCCGGGACCCATCGAAGTGGAAGAAGTaGTTGTGCTGGTTCAAGCGAGGCCTGCCTTCGGCAGCTGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: LGSQLAIRDPSKWKK*LCWFKRGLPSAAAT Trigger: TGTAGCAGCTGCCGAAGGCAGGCCTCGCTTGAACCAGCACAATCACTTCTTCCACTTCGATGGGTCCCGGATTGCAAGCTGGCTGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CAA 90 bp | GTCCCCTACTCCCAACAAGTCCAGTCAACACCAGAAGAGGCCATGCCTAGAGTTGTCCAGGTTCTCTCCTaGATGGTCTTCCCTGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: VPYSQQVQSTPEEAMPRVVQVLS*MVFPGT Trigger: CGTGCCAGGGAAGACCATCAAGGAGAGAACCTGGAC...AACTCTAGGCATGGCCTCTTCTGGTGTTGACTGGACTTGTTGGGAGTAGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS GCA 90 bp | GAAGAAGTGATTGTGCTGGTTCAAGCGAGGCCTGCCTTCGGCAGCTaGTACAGGAACCAAGTTCTCGTCCAGGTTCTCTCCTTGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EEVIVLVQARPAFGS*YRNQVLVQVLSLMV Trigger: GACCATCAAGGAGAGAACCTGGACGAGAACTTGGTTCCTGTAGCAGCTGCCGAAGGCAGGCCTCGCTTGAACCAGCACAATCACTTCTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS GCA 90 bp | ACCCATCGAAGTGGAAGAAGTGATTGTGCTGGTTCAAGCGAGGCCTaGCTTCGGCAGCTGCTACAGGAACCAAGTTCTCGTCCAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: THRSGRSDCAGSSEA*LRQLLQEPSSRPGS Trigger: AGAACCTGGACGAGAACTTGGTTCCTGTAGCAGCTGCCGAAGGCAGGCCTCGCTTGAACCAGCACAATCACTTCTTCCACTTCGATGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS CCA 90 bp | CCACTGGGCTGTTCAGTGCAGGCCTCAGGCTATCCGACCGCTGCGTaGGGAAAGGTACTTGAATCCGTCCTTCTAAGATGTTATCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLGCSVQASGYPTAA*GKVLESVLLRCYLL Trigger: CAACAGATAACATCTTAGAAGGACGGATTCAAGTACCTTTCCCCACGCAGCGGTCGGATAGCCTGAGGCCTGCACTGAACAGCCCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS TCA 90 bp | TTTAAGAACCGCTTTCGAGCCTGCTGCAGGAGGTCATCCTTGCGCTaGACTAACATGCGCTGTCTCTCATCAGCAGACTTGGAGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: FKNRFRACCRRSSLR*TNMRCLSSADLEKR Trigger: CCGCTTCTCCAAGTCTGCTGATGAGAGACAGCGCATGTTAGTTCAGCGCAAGGATGACCTCCTGCAGCAGGCTCGAAAGCGGTTCTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS TCA 90 bp | TCGGCAGCTGCTACAGGAACCAAGTTCTCGTCCAGGTTCTCTCCTTaGTGGTCTTCCCTGGCACGACTGCCATCAGCAATATTAAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SAAATGTKFSSRFSP*WSSLARLPSAILRD Trigger: GTCTCTTAATATTGCTGATGGCAGTCGTGCCAGGGAAGACCATCAAGGAGAGAACCTGGACGAGAACTTGGTTCCTGTAGCAGCTGCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS TCA 90 bp | AGTGCAGGCCTCAGGCTATCCGACCGCTGCGTGGGGAAAGGTACTTaGATCCGTCCTTCTAAGATGTTATCTGTTGTTATCTCCACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAGLRLSDRCVGKGT*IRPSKMLSVVISTE Trigger: CTCCGTGGAGATAACAACAGATAACATCTTAGAAGGACGGATTCAAGTACCTTTCCCCACGCAGCGGTCGGATAGCCTGAGGCCTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CAA 90 bp | TGGTGGTCAGGCTCCTGCTGCGCACCTTCTGACTGCTGTTATGCACCCTCCCCAATAGATAACCAGATGTaGCCAAATAACAGCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWSGSCCAPSDCCYAPSPIDNQM*PNNSMW Trigger: CCACATGCTGTTATTTGGCAACATCTGGTTATCTAT...TGGGGAGGGTGCATAACAGCAGTCAGAAGGTGCGCAGCAGGAGCCTGACCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS-3UTR CAA 90 bp | TTCTACTCCAGGTACCAAACCAGTTCTTTCTACACCATGTCCTGCTGGTCTAGACACAGGGCAGTTTCCTaGCAGCCTGCATGGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FYSRYQTSSFYTMSCWSRHRAVS*QPAWSP Trigger: GGGACTCCATGCAGGCTGCAAGGAAACTGCCCTGTG...TCTAGACCAGCAGGACATGGTGTAGAAAGAACTGGTTTGGTACCTGGAGTAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS TCA 90 bp | TGCCTGCGTGATGCCAAGAATGTTGGTAGTGTGCATCACTTCAACTaGAAAACTTGGCAGCCAGCTTGCAATCCGGGACCCATCGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLRDAKNVGSVHHFN*KTWQPACNPGPIEV Trigger: CACTTCGATGGGTCCCGGATTGCAAGCTGGCTGCCAAGTTTTTCAGTTGAAGTGATGCACACTACCAACATTCTTGGCATCACGCAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
||
| CDS CCA 90 bp | CAGCAGGAGAGCAGCATAGCAATCAGCAGGGACAGGACTCTCCCATaGCTGCTCATTGGAGTGGTGGGAGAAAAGGAAAGGTATTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QQESSIAISRDRTLP*LLIGVVGEKERYSN Trigger: ATTTGAATACCTTTCCTTTTCTCCCACCACTCCAATGAGCAGCCATGGGAGAGTCCTGTCCCTGCTGATTGCTATGCTGCTCTCCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CAA 90 bp | TTATTTTCATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTGCTTCCTCCAACTTGGCAGCCAGCTaGCAATCCGGGACCCATCGA | + |
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Preference number: 5 (lower is better) Translates to: LFSCAAWKGVKDKLSASSNLAAS*QSGTHR Trigger: TCGATGGGTCCCGGATTGCAAGCTGGCTGCCAAGTT...GGAGGAAGCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACATGAAAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS TCA 90 bp | TTGCAGCCTGCATGGAGTCCCAGCAGATTGCACAGTCATCATTATTaGCAGCTAGTTCCTCTGGAGTTGCAACAGCAAACCTGGCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: LQPAWSPSRLHSHHY*QLVPLELQQQTWLP Trigger: TGGAAGCCAGGTTTGCTGTTGCAACTCCAGAGGAACTAGCTGTCAATAATGATGACTGTGCAATCTGCTGGGACTCCATGCAGGCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS GCA 90 bp | TTTTGTTTAAGAACCGCTTTCGAGCCTGCTGCAGGAGGTCATCCTTaGGCTGAACTAACATGCGCTGTCTCTCATCAGCAGACTTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: FCLRTAFEPAAGGHP*AELTCAVSHQQTWR Trigger: TCTCCAAGTCTGCTGATGAGAGACAGCGCATGTTAGTTCAGCGCAAGGATGACCTCCTGCAGCAGGCTCGAAAGCGGTTCTTAAACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS GCA 90 bp | ACGAAGGCAGGAGTTGTGAAAAAGATGTCCACAGGGCAGTTTCCTTaGAGCCTGCATGGAGTCCCAGCAGATTGCACAGTCATCATTATT | + |
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Preference number: 5 (lower is better) Translates to: TKAGVVKKMSTGQFP*SLHGVPADCTVIII Trigger: AATAATGATGACTGTGCAATCTGCTGGGACTCCATGCAGGCTGCAAGGAAACTGCCCTGTGGACATCTTTTTCACAACTCCTGCCTTCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CAA 90 bp | TGTCAAAGACAAGCTCAGTGCTTCCTCCTCCAAGTAAAACACAGGAGCGACCACCTTCAACTGAAAAACTaGGCAGCCAGCTTGCAATCC | + |
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Preference number: 5 (lower is better) Translates to: CQRQAQCFLLQVKHRSDHLQLKN*AASLQS Trigger: GGATTGCAAGCTGGCTGCCAAGTTTTTCAGTTGAAG...GTGGTCGCTCCTGTGTTTTACTTGGAGGAGGAAGCACTGAGCTTGTCTTTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CAA 90 bp | CGTTTAATGAGACCCACAGGAACAAAAGCAGGGAACTCAAGGGCTCCAGGGACAGTGATGCCAAGAATGTaGGTAGTGTGCATCACTTCA | + |
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Preference number: 5 (lower is better) Translates to: RLMRPTGTKAGNSRAPGTVMPRM*VVCITS Trigger: TGAAGTGATGCACACTACCAACATTCTTGGCATCAC...TGTCCCTGGAGCCCTTGAGTTCCCTGCTTTTGTTCCTGTGGGTCTCATTAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CAA 90 bp | GCCATGCCTAGAGTTAAAATGTGCAATGTTTCTAAGGGGAAGAGAAATGTCACACTCTCATCAGCAGACTaGGAGAAGCGGCTTCCACGG | + |
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Preference number: 5 (lower is better) Translates to: AMPRVKMCNVSKGKRNVTLSSAD*EKRLPR Trigger: CCGTGGAAGCCGCTTCTCCAAGTCTGCTGATGAGAG...TGTGACATTTCTCTTCCCCTTAGAAACATTGCACATTTTAACTCTAGGCATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CAA 90 bp | GATCCGTGCTTCCTTCCAGCTGTGGTGCTAAAATACTCAACATCTGCTGTGGTTGCACAGTCATCATTATaGACAGCTAGTTCCTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: DPCFLPAVVLKYSTSAVVAQSSL*TASSSG Trigger: TCCAGAGGAACTAGCTGTCAATAATGATGACTGTGC...AACCACAGCAGATGTTGAGTATTTTAGCACCACAGCTGGAAGGAAGCACGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CAA 90 bp | CAGCATTATAAACCACGCCCCTCCCAGTTGAACAGCATTATAAACCCCAACCCACTAAGATGTTATCTGTaGTTATCTCCACGGAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: QHYKPRPSQLNSIINPNPLRCYL*LSPRSV Trigger: CACGCTCCGTGGAGATAACAACAGATAACATCTTAG...TGGGTTGGGGTTTATAATGCTGTTCAACTGGGAGGGGCGTGGTTTATAATGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CAA 90 bp | GTCCCCTACTCCCAACAAGTCCAGTCAACACCAGAAGAGGCCATGCCTAGAGTTTCATCTTCAGAACTTTaGTTTAAGAACCGCTTTCGA | + |
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Preference number: 5 (lower is better) Translates to: VPYSQQVQSTPEEAMPRVSSSEL*FKNRFR Trigger: TCGAAAGCGGTTCTTAAACAAAAGTTCTGAAGATGA...AACTCTAGGCATGGCCTCTTCTGGTGTTGACTGGACTTGTTGGGAGTAGGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CCA 90 bp | AGATGCTGTCTTTCACTCACTCGAAGAGGGCCGAACACAATACACTaGATAAGCTTAGCCACCAACATCAAAACACAGCAAGCAGTATTC | + |
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Preference number: 5 (lower is better) Translates to: RCCLSLTRRGPNTIH*ISLATNIKTQQAVF Trigger: GAATACTGCTTGCTGTGTTTTGATGTTGGTGGCTAAGCTTATCCAGTGTATTGTGTTCGGCCCTCTTCGAGTGAGTGAAAGACAGCATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053766.14 ENSMUST00000143265.2 |
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| CDS TCA 90 bp | TGTAATACACATAGGTTCCCTTTCCTTCCCACGTCCCTTCGTGGTTaGGGTCCCAGAGGTGAATTACATATCTTAAAATCACATGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: CNTHRFPFLPTSLRG*GPRGELHILKSHEL Trigger: CAGCTCATGTGATTTTAAGATATGTAATTCACCTCTGGGACCTCAACCACGAAGGGACGTGGGAAGGAAAGGGAACCTATGTGTATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CAA 90 bp | TTCCCCTTTATTTTCATGTGCAGCCTGGAAAGGTGTCAAAGACAAGCTCAGTGCGAACAGGTAACGAAGTaGCATAAAGATGACCAAGCT | + |
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Preference number: 5 (lower is better) Translates to: FPFIFMCSLERCQRQAQCEQVTK*HKDDQA Trigger: AGCTTGGTCATCTTTATGCAACTTCGTTACCTGTTC...GCACTGAGCTTGTCTTTGACACCTTTCCAGGCTGCACATGAAAATAAAGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS-3UTR CAA 90 bp | TTCTACTCCAGGTACCAAACCAGTTCTTTCTACACCATGTCCTGCTGGTCTAGATTCCAAAACTTGTCTTaGAGATGCTGTCTTTCACTC | + |
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Preference number: 5 (lower is better) Translates to: FYSRYQTSSFYTMSCWSRFQNLS*RCCLSL Trigger: GAGTGAAAGACAGCATCTCAAAGACAAGTTTTGGAA...TCTAGACCAGCAGGACATGGTGTAGAAAGAACTGGTTTGGTACCTGGAGTAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS GCA 72 bp | CAGGTCAGGGCTGGGCCTCTCCACTGGGCTGTTCAGTaGAGGCCTCAGGCTATCCGACCGCTGCGTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: QVRAGPLHWAVQ*RPQAIRPLRGE Trigger: TTCCCCACGCAGCGGTCGGATAGCCTGAGGCCTGCACTGAACAGCCCAGTGGAGAGGCCCAGCCCTGACCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS GCA 72 bp | TGTCCGTTGCCTCTGAAGTCTCCGCTCAGCAGCGGCTaGCAGCATCCTTCGGCGCAGGGTCACGGGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: CPLPLKSPLSSG*QHPSAQGHGVR Trigger: TCTGACCCCGTGACCCTGCGCCGAAGGATGCTGGCAGCCGCTGCTGAGCGGAGACTTCAGAGGCAACGGACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS GCA 72 bp | ATTGTGCTGGTTCAAGCGAGGCCTGCCTTCGGCAGCTaGTACAGGAACCAAGTTCTCGTCCAGGTTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IVLVQARPAFGS*YRNQVLVQVLS Trigger: GGAGAGAACCTGGACGAGAACTTGGTTCCTGTAGCAGCTGCCGAAGGCAGGCCTCGCTTGAACCAGCACAAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS GCA 72 bp | AGTGGAAGAAGTGATTGTGCTGGTTCAAGCGAGGCCTaGCTTCGGCAGCTGCTACAGGAACCAAGTTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: SGRSDCAGSSEA*LRQLLQEPSSR Trigger: ACGAGAACTTGGTTCCTGTAGCAGCTGCCGAAGGCAGGCCTCGCTTGAACCAGCACAATCACTTCTTCCACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CCA 72 bp | TGTTCAGTGCAGGCCTCAGGCTATCCGACCGCTGCGTaGGGAAAGGTACTTGAATCCGTCCTTCTAAGATGT | + |
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Preference number: 6 (lower is better) Translates to: CSVQASGYPTAA*GKVLESVLLRC Trigger: ACATCTTAGAAGGACGGATTCAAGTACCTTTCCCCACGCAGCGGTCGGATAGCCTGAGGCCTGCACTGAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CCA 72 bp | GCTGAACTAACATGCGCTGTCTCTCATCAGCAGACTTaGAGAAGCGGCTTCCACGGGCCTCAAAGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: AELTCAVSHQQT*RSGFHGPQSLP Trigger: TGGAAGACTTTGAGGCCCGTGGAAGCCGCTTCTCCAAGTCTGCTGATGAGAGACAGCGCATGTTAGTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS TCA 72 bp | CTGTTCTCACGGTCACAAGAAGAGACTCTGCAGCCATaGAAGCCAAGGTGTGCATGCCATGTGTGTAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LFSRSQEETLQP*KPRCACHVCSL Trigger: CAGGCTACACACATGGCATGCACACCTTGGCTTTCATGGCTGCAGAGTCTCTTCTTGTGACCGTGAGAACAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS TCA 72 bp | GCTACAGGAACCAAGTTCTCGTCCAGGTTCTCTCCTTaGTGGTCTTCCCTGGCACGACTGCCATCAGCAATA | + |
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Preference number: 6 (lower is better) Translates to: ATGTKFSSRFSP*WSSLARLPSAI Trigger: TATTGCTGATGGCAGTCGTGCCAGGGAAGACCATCAAGGAGAGAACCTGGACGAGAACTTGGTTCCTGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CAA 72 bp | TGCTACAGGAACCAAGTTCTCGTCCAGGTTCTCTCCTaGATGGTCTTCCCTGGCACGACTGCCATCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: CYRNQVLVQVLS*MVFPGTTAISN Trigger: ATTGCTGATGGCAGTCGTGCCAGGGAAGACCATCAAGGAGAGAACCTGGACGAGAACTTGGTTCCTGTAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CAA 90 bp | CTTGCAGCCTGCATGGAGTCCCAGCAGATTGCACAGTCATCATTATaGACAGCTAGTTCCTCTGGAGTTGCAACAGCAAACCTGGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LAACMESQQIAQSSL*TASSSGVATANLAS Trigger: GGAAGCCAGGTTTGCTGTTGCAACTCCAGAGGAACTAGCTGTCAATAATGATGACTGTGCAATCTGCTGGGACTCCATGCAGGCTGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CAA 90 bp | TTCGGCAGCTGCTACAGGAACCAAGTTCTCGTCCAGGTTCTCTCCTaGATGGTCTTCCCTGGCACGACTGCCATCAGCAATATTAAGAGA | + |
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Preference number: 6 (lower is better) Translates to: FGSCYRNQVLVQVLS*MVFPGTTAISNIKR Trigger: TCTCTTAATATTGCTGATGGCAGTCGTGCCAGGGAAGACCATCAAGGAGAGAACCTGGACGAGAACTTGGTTCCTGTAGCAGCTGCCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CAA 90 bp | TCAGAAGGGAGGAGTCTCTCTGAGGCCCCATCATCTTCAGAACTTTaGTTTAAGAACCGCTTTCGAGCCTGCTGCAGGAGGTCATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SEGRSLSEAPSSSEL*FKNRFRACCRRSSL Trigger: CAAGGATGACCTCCTGCAGCAGGCTCGAAAGCGGTTCTTAAACAAAAGTTCTGAAGATGATGGGGCCTCAGAGAGACTCCTCCCTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CAA 72 bp | AGGAGTTGTGAAAAAGATGTCCACAGGGCAGTTTCCTaGCAGCCTGCATGGAGTCCCAGCAGATTGCACAGT | + |
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Preference number: 6 (lower is better) Translates to: RSCEKDVHRAVS*QPAWSPSRLHS Trigger: ACTGTGCAATCTGCTGGGACTCCATGCAGGCTGCAAGGAAACTGCCCTGTGGACATCTTTTTCACAACTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CAA 72 bp | AGGAGTCTCTCTGAGGCCCCATCATCTTCAGAACTTTaGTTTAAGAACCGCTTTCGAGCCTGCTGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RSLSEAPSSSEL*FKNRFRACCRR Trigger: CCTCCTGCAGCAGGCTCGAAAGCGGTTCTTAAACAAAAGTTCTGAAGATGATGGGGCCTCAGAGAGACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CAA 90 bp | GCGTGGGGAAAGGTACTTGAATCCGTCCTTCTAAGATGTTATCTGTaGTTATCTCCACGGAGCGTGTCATCTGGAGGTCCTGGAGCACAA | + |
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Preference number: 6 (lower is better) Translates to: AWGKVLESVLLRCYL*LSPRSVSSGGPGAQ Trigger: TTGTGCTCCAGGACCTCCAGATGACACGCTCCGTGGAGATAACAACAGATAACATCTTAGAAGGACGGATTCAAGTACCTTTCCCCACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS TCA 72 bp | GATGCCAAGAATGTTGGTAGTGTGCATCACTTCAACTaGAAAACTTGGCAGCCAGCTTGCAATCCGGGACCC | + |
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Preference number: 6 (lower is better) Translates to: DAKNVGSVHHFN*KTWQPACNPGP Trigger: GGGTCCCGGATTGCAAGCTGGCTGCCAAGTTTTTCAGTTGAAGTGATGCACACTACCAACATTCTTGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CAA 90 bp | AACGAAGGCAGGAGTTGTGAAAAAGATGTCCACAGGGCAGTTTCCTaGCAGCCTGCATGGAGTCCCAGCAGATTGCACAGTCATCATTAT | + |
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Preference number: 6 (lower is better) Translates to: NEGRSCEKDVHRAVS*QPAWSPSRLHSHHY Trigger: ATAATGATGACTGTGCAATCTGCTGGGACTCCATGCAGGCTGCAAGGAAACTGCCCTGTGGACATCTTTTTCACAACTCCTGCCTTCGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS TCA 72 bp | CTCAGGCTATCCGACCGCTGCGTGGGGAAAGGTACTTaGATCCGTCCTTCTAAGATGTTATCTGTTGTTATC | + |
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Preference number: 6 (lower is better) Translates to: LRLSDRCVGKGT*IRPSKMLSVVI Trigger: GATAACAACAGATAACATCTTAGAAGGACGGATTCAAGTACCTTTCCCCACGCAGCGGTCGGATAGCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CAA 72 bp | TGTGCATCACTTCAACTGAAAAACTTGGCAGCCAGCTaGCAATCCGGGACCCATCGAAGTGGAAGAAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: CASLQLKNLAAS*QSGTHRSGRSD Trigger: ATCACTTCTTCCACTTCGATGGGTCCCGGATTGCAAGCTGGCTGCCAAGTTTTTCAGTTGAAGTGATGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CAA 72 bp | TGCATGGAGTCCCAGCAGATTGCACAGTCATCATTATaGACAGCTAGTTCCTCTGGAGTTGCAACAGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: CMESQQIAQSSL*TASSSGVATAN Trigger: GTTTGCTGTTGCAACTCCAGAGGAACTAGCTGTCAATAATGATGACTGTGCAATCTGCTGGGACTCCATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CCA 72 bp | CTTTCACTCACTCGAAGAGGGCCGAACACAATACACTaGATAAGCTTAGCCACCAACATCAAAACACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: LSLTRRGPNTIH*ISLATNIKTQQ Trigger: TTGCTGTGTTTTGATGTTGGTGGCTAAGCTTATCCAGTGTATTGTGTTCGGCCCTCTTCGAGTGAGTGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053766.14 ENSMUST00000143265.2 |
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| CDS CAA 72 bp | AAGGTACTTGAATCCGTCCTTCTAAGATGTTATCTGTaGTTATCTCCACGGAGCGTGTCATCTGGAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: KVLESVLLRCYL*LSPRSVSSGGP Trigger: AGGACCTCCAGATGACACGCTCCGTGGAGATAACAACAGATAACATCTTAGAAGGACGGATTCAAGTACCTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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| CDS CAA 72 bp | ATAAAGATGACCAAGCTAGCCATAGATAACCAGATGTaGCCAAATAACAGCATGTGGATGTGGTGCATGAGG | + |
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Preference number: 6 (lower is better) Translates to: IKMTKLAIDNQM*PNNSMWMWCMR Trigger: CCTCATGCACCACATCCACATGCTGTTATTTGGCAACATCTGGTTATCTATGGCTAGCTTGGTCATCTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053766.14 |
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