Pregenerated sensors for AMDHD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036820Ensembl transcript IDs: ENSMUST00000040735.12, ENSMUST00000129523.3, ENSMUST00000138685.3
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCAGCTTCCTCTGCCTGCCACACCAATTCACCAGAGATGTAAGTaGCCTGGACATGGAGAGTGTCGTCGAGCACCACAAAGTCTGCGG | + |
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Preference number: 1 (lower is better) Translates to: AQLPLPATPIHQRCK*PGHGECRRAPQSLR Trigger: CCGCAGACTTTGTGGTGCTCGACGACACTCTCCATGTCCAGGCCACTTACATCTCTGGTGAATTGGTGTGGCAGGCAGAGGAAGCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
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| 3UTR GCA 90 bp | AGTGTCCTTTCCAGCCAAGACCCTCAGTCACGGCCCAGCTTCCTCTaGCTGCCACACCAATTCACCAGAGATGTAAGTGGCCTGGACATG | + |
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Preference number: 1 (lower is better) Translates to: SVLSSQDPQSRPSFL*LPHQFTRDVSGLDM Trigger: CATGTCCAGGCCACTTACATCTCTGGTGAATTGGTGTGGCAGGCAGAGGAAGCTGGGCCGTGACTGAGGGTCTTGGCTGGAAAGGACACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCTGGAGACCAGCTCCGTaGACTGCCTGGCCTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SLETSSVDCLASPSVLSSWRPAP*TAWPLQ Trigger: TTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCA...GCTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| 3UTR-3UTR GCA 90 bp | GTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTGCAGGGCTCTCAGCTTaGTCCCTGGAGACCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: VPLSVFIQATASPPGVMTAGLSA*SLETSS Trigger: GGAGCTGGTCTCCAGGGAGCAAGCTGAGAGCCCTGC...AGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| 3UTR-3UTR GCA 90 bp | AGTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACGCAGGGCTCTCAGCTTaGTCCCTGGAGACCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SPTVCIYPSHCLPSRSDDAGLSA*SLETSS Trigger: GGAGCTGGTCTCCAGGGAGCAAGCTGAGAGCCCTGC...GTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCCACCAGAGATGTAAGTaGCCTGGACATGGAGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: SLETSSVDCLASPSVLSSHQRCK*PGHGEC Trigger: ACACTCTCCATGTCCAGGCCACTTACATCTCTGGTG...GCTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
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| 3UTR-3UTR GCA 90 bp | GTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTGAGGTTCTGTTTGCAGGGCTCTCAGCTTaGTCCCTGGAGACCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: VFIQATASPPGVMTEVLFAGLSA*SLETSS Trigger: GGAGCTGGTCTCCAGGGAGCAAGCTGAGAGCCCTGC...AAACAGAACCTCAGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGGAGTGATGACTaGGGTTCTGTTTTAGACATA | + |
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Preference number: 2 (lower is better) Translates to: ACSLETSSVDCLASPSVLSRSDD*GSVLDI Trigger: TATGTCTAAAACAGAACCTCAGTCATCACTCCTGGA...AAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| 3UTR-3UTR TCA 90 bp | TCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCTCCAGGAGTGATGACTaGGGTTCTGTTTTAGACATA | + |
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Preference number: 2 (lower is better) Translates to: SLETSSVDCLASPSVLSSSRSDD*GSVLDI Trigger: TATGTCTAAAACAGAACCTCAGTCATCACTCCTGGA...GCTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| 3UTR-3UTR CCA 90 bp | GTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTGAGGTTCTGTTTTGGAGACCAGCTCCGTaGACTGCCTGGCCTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: VFIQATASPPGVMTEVLFWRPAP*TAWPLQ Trigger: TTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCA...AAACAGAACCTCAGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| 3UTR CCA 72 bp | CAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTaGCCTCTCCAAGTGTCCTTTCCAGCCAAGACCCTC | + |
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Preference number: 3 (lower is better) Translates to: QLAPWRPAPWTA*PLQVSFPAKTL Trigger: GAGGGTCTTGGCTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| 3UTR GCA 72 bp | AGGTTCTGTTTTAGACATAGGGCAGGGCTCTCAGCTTaGTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: RFCFRHRAGLSA*SLETSSVDCLA Trigger: GGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGAGCCCTGCCCTATGTCTAAAACAGAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| 3UTR GCA 72 bp | TCCAGCCAAGACCCTCAGTCACGGCCCAGCTTCCTCTaGCTGCCACACCAATTCACCAGAGATGTAAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: SSQDPQSRPSFL*LPHQFTRDVSG Trigger: GCCACTTACATCTCTGGTGAATTGGTGTGGCAGGCAGAGGAAGCTGGGCCGTGACTGAGGGTCTTGGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
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| 3UTR CCA 72 bp | CCTCTGCCTGCCACACCAATTCACCAGAGATGTAAGTaGCCTGGACATGGAGAGTGTCGTCGAGCACCACAA | + |
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Preference number: 3 (lower is better) Translates to: PLPATPIHQRCK*PGHGECRRAPQ Trigger: TTGTGGTGCTCGACGACACTCTCCATGTCCAGGCCACTTACATCTCTGGTGAATTGGTGTGGCAGGCAGAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
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| CDS-3UTR GCA 90 bp | CAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCAATGGGCCCTCCAAGTaGACCCCGAGGACCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QLAPWRPAPWTAWPLQVSNGPSK*TPRTPA Trigger: GGCAGGGGTCCTCGGGGTGCACTTGGAGGGCCCATT...GGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGCGGCAGTTGGTGAACTaGAGCACCGGGGCCCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SQLAPWRPAPWTAWPLQVRQLVN*STGAPA Trigger: AGCGGGGGCCCCGGTGCTCCAGTTCACCAACTGCCG...CACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | TCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCGGCAGTTGGTGAACTaGAGCACCGGGGCCCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SACSLETSSVDCLASPSVRQLVN*STGAPA Trigger: AGCGGGGGCCCCGGTGCTCCAGTTCACCAACTGCCG...GACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | CAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCAAGGAGGTGACACCGTaGGACAGGAGCCTCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QLAPWRPAPWTAWPLQVSKEVTP*DRSLRA Trigger: GGCCCGGAGGCTCCTGTCCCACGGTGTCACCTCCTT...GGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR TCA 90 bp | GGCTCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAATGGGACAGAAGGAGGTaGCACCGTGGGACAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GSQLAPWRPAPWTAWPLQWDRRR*HRGTGA Trigger: GGCTCCTGTCCCACGGTGTCACCTCCTTCTGTCCCA...TTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR GCA 90 bp | CTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGAATGGGCCCTCCAAGTaGACCCCGAGGACCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LPGDQLRGLPGLSKCPFQNGPSK*TPRTPA Trigger: GGCAGGGGTCCTCGGGGTGCACTTGGAGGGCCCATT...CTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR GCA 90 bp | GCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAAATGGGCCCTCCAAGTaGACCCCGAGGACCCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: APWRPAPWTAWPLQVSFPNGPSK*TPRTPA Trigger: GGCAGGGGTCCTCGGGGTGCACTTGGAGGGCCCATT...TGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | TCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCAAGGAGGTGACACCGTaGGACAGGAGCCTCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SACSLETSSVDCLASPSVKEVTP*DRSLRA Trigger: GGCCCGGAGGCTCCTGTCCCACGGTGTCACCTCCTT...GACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR GCA 90 bp | TCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGGTGTATGGCGGCCATTaGCCAAGCCCAGGGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SQLAPWRPAPWTAWPLQVVYGGH*PSPGQG Trigger: TCCCTGCCCTGGGCTTGGGCAATGGCCGCCATACAC...CACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR GCA 90 bp | CAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCCCATGGGGGCTATGCTaGCACCCAGTGTCTTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: QLAPWRPAPWTAWPLQVSPWGLC*HPVSWC Trigger: GCACCAAGACACTGGGTGGCAGCATAGCCCCCATGG...GGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR GCA 90 bp | CAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCCGGCCCAGCTTCCTCTaGCTGCCACACCAATTCACC | + |
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Preference number: 4 (lower is better) Translates to: QLAPWRPAPWTAWPLQVSRPSFL*LPHQFT Trigger: GGTGAATTGGTGTGGCAGGCAGAGGAAGCTGGGCCG...GGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 |
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| CDS-3UTR CCA 90 bp | CAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCAGTCCAGGCTCCCCTTaGTCTTCTCCAGCCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QLAPWRPAPWTAWPLQVSSPGSP*SSPAPA Trigger: TGCTGGGGCTGGAGAAGACCAAGGGGAGCCTGGACT...GGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR GCA 90 bp | TCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGAAGGTGGCCCCACTCTaGACTGCCACTTCTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SQLAPWRPAPWTAWPLQVKVAPL*TATSAA Trigger: GGCTGCAGAAGTGGCAGTGCAGAGTGGGGCCACCTT...CACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR GCA 90 bp | GCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTAAGGTGGCCCCACTCTaGACTGCCACTTCTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: ACSLETSSVDCLASPSVLKVAPL*TATSAA Trigger: GGCTGCAGAAGTGGCAGTGCAGAGTGGGGCCACCTT...AAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | AAGTGGCCTGGACATGGAGAGTGTCGTCGAGCACCACAAAGTCTGCGGCAGAACCGGCAGTTGGTGAACTaGAGCACCGGGGCCCCCGCT | + |
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Preference number: 4 (lower is better) Translates to: KWPGHGECRRAPQSLRQNRQLVN*STGAPA Trigger: AGCGGGGGCCCCGGTGCTCCAGTTCACCAACTGCCG...GTTCTGCCGCAGACTTTGTGGTGCTCGACGACACTCTCCATGTCCAGGCCACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | TCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCGAAGATGCAGTGGCCTaGGGGCAGCTGGTCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: SACSLETSSVDCLASPSVEDAVA*GQLVTG Trigger: ACCAGTGACCAGCTGCCCCCAGGCCACTGCATCTTC...GACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | TCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTGCTGTCCCAGTGTATaGCGGCCATTGCCCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: SQLAPWRPAPWTAWPLQVCCPSV*RPLPKP Trigger: GGGCTTGGGCAATGGCCGCCATACACTGGGACAGCA...CACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | GCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCATGCTGTCCCAGTGTATaGCGGCCATTGCCCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: APWRPAPWTAWPLQVSFPCCPSV*RPLPKP Trigger: GGGCTTGGGCAATGGCCGCCATACACTGGGACAGCA...TGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | CTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGGGACGCACACATCCATaGGGGCTATGCTGCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: LPGDQLRGLPGLSKCPFQGRTHP*GLCCHP Trigger: TGGGTGGCAGCATAGCCCCCATGGATGTGTGCGTCC...CTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | GCCTGGCCTCTCCAAGTGTCCTTTCCAGCCAAGACCCTCAGTCACGGCCCAGCTGGACGCACACATCCATaGGGGCTATGCTGCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: AWPLQVSFPAKTLSHGPAGRTHP*GLCCHP Trigger: TGGGTGGCAGCATAGCCCCCATGGATGTGTGCGTCC...AGCTGGGCCGTGACTGAGGGTCTTGGCTGGAAAGGACACTTGGAGAGGCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | TCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCAGTCCAGGCTCCCCTTaGTCTTCTCCAGCCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SACSLETSSVDCLASPSVSPGSP*SSPAPA Trigger: TGCTGGGGCTGGAGAAGACCAAGGGGAGCCTGGACT...GACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR GCA 90 bp | GGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCCAAGACGGCCCAGCTTCCTCTaGCTGCCACACCAATTCACC | + |
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Preference number: 4 (lower is better) Translates to: GDQLRGLPGLSKCPFQPRRPSFL*LPHQFT Trigger: GGTGAATTGGTGTGGCAGGCAGAGGAAGCTGGGCCG...TCTTGGCTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 |
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| CDS-3UTR CCA 90 bp | TCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCGTGATAAACCTCTGGTaGGGAGGTGACCAGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SACSLETSSVDCLASPSVVINLW*GGDQGG Trigger: CCCACCCTGGTCACCTCCCCACCAGAGGTTTATCAC...GACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | GCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTGACACACGGATGCCTTaGGCTGTCAGTGCCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: ACSLETSSVDCLASPSVLDTRMP*AVSAWI Trigger: GATCCAGGCACTGACAGCCCAAGGCATCCGTGTGTC...AAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | GGCTCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAACCTGGGTCACGGTGGTaGAAAGGCAACATGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: GSQLAPWRPAPWTAWPLQPGSRW*KGNMAL Trigger: CAATGCCATGTTGCCTTTCCACCACCGTGACCCAGG...TTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | ACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCCAAGACCCTCAGTCACGGCCCAGAAGATGCAGTGGCCTaGGGGCAGCTGGTCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: TAWPLQVSFPAKTLSHGPEDAVA*GQLVTG Trigger: ACCAGTGACCAGCTGCCCCCAGGCCACTGCATCTTC...TGGGCCGTGACTGAGGGTCTTGGCTGGAAAGGACACTTGGAGAGGCCAGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | TGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCCAAGGCGCCCAGGAGGACCTaGCACACTTATAGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: WRPAPWTAWPLQVSFPAKAPRRT*HTYSCW Trigger: CCAGCAGCTATAAGTGTGCCAGGTCCTCCTGGGCGC...CTTGGCTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR TCA 90 bp | TCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCGTTGAGCCTGCTGCATaGGGAAAACACAGCGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SLETSSVDCLASPSVLSSVEPAA*GKHSGG Trigger: TCCACCGCTGTGTTTTCCTCATGCAGCAGGCTCAAC...GCTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | CTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTGACACACGGATGCCTTaGGCTGTCAGTGCCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LAPWRPAPWTAWPLQVSFDTRMP*AVSAWI Trigger: GATCCAGGCACTGACAGCCCAAGGCATCCGTGTGTC...AAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | TCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCAAGCCCTACTATGCCTaGGTCACGGTGGTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SACSLETSSVDCLASPSVKPYYA*VTVVER Trigger: CCTTTCCACCACCGTGACCCAGGCATAGTAGGGCTT...GACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGCAGAGCTGCAGGGTTaGTGTGTATGCCATCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GSQLAPWRPAPWTAWPLQAELQG*CVCHQQ Trigger: TTGCTGATGGCATACACACCAACCCTGCAGCTCTGC...TTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR TCA 90 bp | TCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCCTCTTCACAGGGATCTaGGGAAGGACCTTGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLETSSVDCLASPSVLSSLFTGI*GRTLPV Trigger: AACTGGCAAGGTCCTTCCTCAGATCCCTGTGAAGAG...GCTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | CTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCTTGTGATAAACCTCTaGTGGGGAGGTGACCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPGDQLRGLPGLSKCPFQLVINL*WGGDQG Trigger: ACCCTGGTCACCTCCCCACCAGAGGTTTATCACAAG...CTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | CTGGACATGGAGAGTGTCGTCGAGCACCACAAAGTCTGCGGCAGAACCAGAGGATTCCCGGCTGATGAATaGGCCCTCCAAGTGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LDMESVVEHHKVCGRTRGFPADE*ALQVHP Trigger: GGGGTGCACTTGGAGGGCCCATTCATCAGCCGGGAA...TCCTCTGGTTCTGCCGCAGACTTTGTGGTGCTCGACGACACTCTCCATGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | GCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCAGAGCTGCAGGGTTaGTGTGTATGCCATCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: APWRPAPWTAWPLQVSFPAELQG*CVCHQQ Trigger: TTGCTGATGGCATACACACCAACCCTGCAGCTCTGC...TGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | CAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCCACCAGAGATGTAAGTaGCCTGGACATGGAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLAPWRPAPWTAWPLQVSHQRCK*PGHGEC Trigger: ACACTCTCCATGTCCAGGCCACTTACATCTCTGGTG...GGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 |
||
| CDS-3UTR CCA 90 bp | CTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTTGTAATCTGGACTGGTaGGGGAGCTGCATCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LAPWRPAPWTAWPLQVSFCNLDW*GSCIST Trigger: GGTGCTGATGCAGCTCCCCCACCAGTCCAGATTACA...AAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS-3UTR TCA 90 bp | GTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTTGGGACAGAAGGAGGTaGCACCGTGGGACAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPLSVFIQATASPPGVMTWDRRR*HRGTGA Trigger: GGCTCCTGTCCCACGGTGTCACCTCCTTCTGTCCCA...AGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR GCA 90 bp | GCAAGTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGTGTATGGCGGCCATTaGCCAAGCCCAGGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASPTVCIYPSHCLPSRSDVYGGH*PSPGQG Trigger: TCCCTGCCCTGGGCTTGGGCAATGGCCGCCATACAC...ATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGACTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 |
||
| CDS-3UTR GCA 90 bp | CCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTGAGGTGTATGGCGGCCATTaGCCAAGCCCAGGGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLSVFIQATASPPGVMTEVYGGH*PSPGQG Trigger: TCCCTGCCCTGGGCTTGGGCAATGGCCGCCATACAC...CTCAGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR GCA 90 bp | AGTCTGCGGCAGAACCAGAGGATGAGAGGAGACGGTGGAATGGTCCATACCCTACCATGGGGGCTATGCTaGCACCCAGTGTCTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRQNQRMRGDGGMVHTLPWGLC*HPVSWC Trigger: GCACCAAGACACTGGGTGGCAGCATAGCCCCCATGG...TAGGGTATGGACCATTCCACCGTCTCCTCTCATCCTCTGGTTCTGCCGCAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | CTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCTTGTGATAAACCTCTaGTGGGGAGGTGACCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAPWRPAPWTAWPLQVSFLVINL*WGGDQG Trigger: ACCCTGGTCACCTCCCCACCAGAGGTTTATCACAAG...AAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | CTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTGCAGAGCTGCAGGGTTaGTGTGTATGCCATCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAPWRPAPWTAWPLQVSFAELQG*CVCHQQ Trigger: TTGCTGATGGCATACACACCAACCCTGCAGCTCTGC...AAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | CCTCTGCCTGCCACACCAATTCACCAGAGATGTAAGTGGCCTGGACATGGAGAGAGTCCAGGCTCCCCTTaGTCTTCTCCAGCCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLPATPIHQRCKWPGHGESPGSP*SSPAPA Trigger: TGCTGGGGCTGGAGAAGACCAAGGGGAGCCTGGACT...CTCTCCATGTCCAGGCCACTTACATCTCTGGTGAATTGGTGTGGCAGGCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | GCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTCACCAGAGATGTAAGTaGCCTGGACATGGAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACSLETSSVDCLASPSVLHQRCK*PGHGEC Trigger: ACACTCTCCATGTCCAGGCCACTTACATCTCTGGTG...AAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAAGTGTCCTTTCCAGCCAAGACCCTCAGTCACGGCCCAGCTTCCTCTGAAGGACCTTGCCAGTTaGGCCTGCTGCATGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSKCPFQPRPSVTAQLPLKDLAS*ACCMRK Trigger: TTTCCTCATGCAGCAGGCTCAACTGGCAAGGTCCTT...CAGAGGAAGCTGGGCCGTGACTGAGGGTCTTGGCTGGAAAGGACACTTGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | TCGAGCACCACAAAGTCTGCGGCAGAACCAGAGGATGAGAGGAGACGGTGGAATGTGATAAACCTCTGGTaGGGAGGTGACCAGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSTTKSAAEPEDERRRWNVINLW*GGDQGG Trigger: CCCACCCTGGTCACCTCCCCACCAGAGGTTTATCAC...ATTCCACCGTCTCCTCTCATCCTCTGGTTCTGCCGCAGACTTTGTGGTGCTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATTTCCCGGCTGATGAATaGGCCCTCCAAGTGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASPTVCIYPSHCLPSRSDFPADE*ALQVHP Trigger: GGGGTGCACTTGGAGGGCCCATTCATCAGCCGGGAA...ATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGACTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 |
||
| CDS-3UTR CCA 90 bp | AGTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACGAAGATGCAGTGGCCTaGGGGCAGCTGGTCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPTVCIYPSHCLPSRSDDEDAVA*GQLVTG Trigger: ACCAGTGACCAGCTGCCCCCAGGCCACTGCATCTTC...GTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | CAATTCACCAGAGATGTAAGTGGCCTGGACATGGAGAGTGTCGTCGAGCACCACTGCTGTCCCAGTGTATaGCGGCCATTGCCCAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QFTRDVSGLDMESVVEHHCCPSV*RPLPKP Trigger: GGGCTTGGGCAATGGCCGCCATACACTGGGACAGCA...GTGGTGCTCGACGACACTCTCCATGTCCAGGCCACTTACATCTCTGGTGAATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | GTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTGGACGCACACATCCATaGGGGCTATGCTGCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPLSVFIQATASPPGVMTGRTHP*GLCCHP Trigger: TGGGTGGCAGCATAGCCCCCATGGATGTGTGCGTCC...AGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR TCA 90 bp | CTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGGTGGCCAACACATCATaGAAAGCATTGGCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPGDQLRGLPGLSKCPFQVANTS*KALASK Trigger: CTTTGAAGCCAATGCTTTTCATGATGTGTTGGCCAC...CTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR TCA 90 bp | CTGGACATGGAGAGTGTCGTCGAGCACCACAAAGTCTGCGGCAGAACCAGAGGACTCTTCACAGGGATCTaGGGAAGGACCTTGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDMESVVEHHKVCGRTRGLFTGI*GRTLPV Trigger: AACTGGCAAGGTCCTTCCTCAGATCCCTGTGAAGAG...TCCTCTGGTTCTGCCGCAGACTTTGTGGTGCTCGACGACACTCTCCATGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | GCAAGTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGTGATAAACCTCTGGTaGGGAGGTGACCAGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASPTVCIYPSHCLPSRSDVINLW*GGDQGG Trigger: CCCACCCTGGTCACCTCCCCACCAGAGGTTTATCAC...ATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGACTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 |
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| CDS-3UTR CCA 90 bp | GCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTCATCATGAAAAGCATTaGCTTCAAAGGAGCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ACSLETSSVDCLASPSVLHHEKH*LQRSGG Trigger: ACCTCCGCTCCTTTGAAGCCAATGCTTTTCATGATG...AAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR GCA 90 bp | GTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTGAGGTTCTGTTTCCATGGGGGCTATGCTaGCACCCAGTGTCTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFIQATASPPGVMTEVLFPWGLC*HPVSWC Trigger: GCACCAAGACACTGGGTGGCAGCATAGCCCCCATGG...AAACAGAACCTCAGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | GGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCCAAGACATCATGAAAAGCATTaGCTTCAAAGGAGCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GDQLRGLPGLSKCPFQPRHHEKH*LQRSGG Trigger: ACCTCCGCTCCTTTGAAGCCAATGCTTTTCATGATG...TCTTGGCTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | CCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTGAGCCTGGGTCACGGTGGTaGAAAGGCAACATGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PLSVFIQATASPPGVMTEPGSRW*KGNMAL Trigger: CAATGCCATGTTGCCTTTCCACCACCGTGACCCAGG...CTCAGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | GTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTCCTGGGTCACGGTGGTaGAAAGGCAACATGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VPLSVFIQATASPPGVMTPGSRW*KGNMAL Trigger: CAATGCCATGTTGCCTTTCCACCACCGTGACCCAGG...AGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | GTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTAAGCCCTACTATGCCTaGGTCACGGTGGTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VPLSVFIQATASPPGVMTKPYYA*VTVVER Trigger: CCTTTCCACCACCGTGACCCAGGCATAGTAGGGCTT...AGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR CCA 90 bp | CCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTGAGAAGCCCTACTATGCCTaGGTCACGGTGGTGGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSVFIQATASPPGVMTEKPYYA*VTVVER Trigger: CCTTTCCACCACCGTGACCCAGGCATAGTAGGGCTT...CTCAGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS-3UTR TCA 90 bp | CTCTCCAAGTGTCCTTTCCAGCCAAGACCCTCAGTCACGGCCCAGCTTCCTCTGGTGGCCAACACATCATaGAAAGCATTGGCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSKCPFQPRPSVTAQLPLVANTS*KALASK Trigger: CTTTGAAGCCAATGCTTTTCATGATGTGTTGGCCAC...CAGAGGAAGCTGGGCCGTGACTGAGGGTCTTGGCTGGAAAGGACACTTGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS-3UTR TCA 90 bp | AGTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACAAGGACCTTGCCAGTTaGGCCTGCTGCATGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPTVCIYPSHCLPSRSDDKDLAS*ACCMRK Trigger: TTTCCTCATGCAGCAGGCTCAACTGGCAAGGTCCTT...GTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR GCA 90 bp | TGTAAGTGGCCTGGACATGGAGAGTGTCGTCGAGCACCACAAAGTCTGCGGCAGCAGGGTTGGTGTGTATaGCATCAGCAATCATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CKWPGHGECRRAPQSLRQQGWCV*HQQSSH Trigger: ATGGGATGATTGCTGATGGCATACACACCAACCCTG...CTGCCGCAGACTTTGTGGTGCTCGACGACACTCTCCATGTCCAGGCCACTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | CCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTGAGCTTGTGATAAACCTCTaGTGGGGAGGTGACCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLSVFIQATASPPGVMTELVINL*WGGDQG Trigger: ACCCTGGTCACCTCCCCACCAGAGGTTTATCACAAG...CTCAGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR GCA 90 bp | CCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTGAGCAGGGTTGGTGTGTATaGCATCAGCAATCATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLSVFIQATASPPGVMTEQGWCV*HQQSSH Trigger: ATGGGATGATTGCTGATGGCATACACACCAACCCTG...CTCAGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CCA 90 bp | ACCAGAGATGTAAGTGGCCTGGACATGGAGAGTGTCGTCGAGCACCACAAAGTCCATCATGAAAAGCATTaGCTTCAAAGGAGCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRDVSGLDMESVVEHHKVHHEKH*LQRSGG Trigger: ACCTCCGCTCCTTTGAAGCCAATGCTTTTCATGATG...GACTTTGTGGTGCTCGACGACACTCTCCATGTCCAGGCCACTTACATCTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS-3UTR GCA 90 bp | GTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACTGAGGTTCTGTTTCAGGGTTGGTGTGTATaGCATCAGCAATCATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VFIQATASPPGVMTEVLFQGWCV*HQQSSH Trigger: ATGGGATGATTGCTGATGGCATACACACCAACCCTG...AAACAGAACCTCAGTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CCA 90 bp | TCTGGTGGGGAGGTGACCAGGGTGGGACAGAAGGAGGTGACACCGTaGGACAGGAGCCTCCGGGCCACTAGGGCGACCCCCGAACCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SGGEVTRVGQKEVTP*DRSLRATRATPEPT Trigger: CGTGGGTTCGGGGGTCGCCCTAGTGGCCCGGAGGCTCCTGTCCCACGGTGTCACCTCCTTCTGTCCCACCCTGGTCACCTCCCCACCAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | GGCTCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAACGCAGGATGCGGCAGTaGGTGAACTGGAGCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSQLAPWRPAPWTAWPLQRRMRQ*VNWSTG Trigger: CCCGGTGCTCCAGTTCACCAACTGCCGCATCCTGCG...TTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | TCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCCGCAGGATGCGGCAGTaGGTGAACTGGAGCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLETSSVDCLASPSVLSSRRMRQ*VNWSTG Trigger: CCCGGTGCTCCAGTTCACCAACTGCCGCATCCTGCG...GCTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | TCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGCGCAGGATGCGGCAGTaGGTGAACTGGAGCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQLAPWRPAPWTAWPLQVRRMRQ*VNWSTG Trigger: CCCGGTGCTCCAGTTCACCAACTGCCGCATCCTGCG...CACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | TCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGAGTGTATGGCGGCCATaGCCCAAGCCCAGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQLAPWRPAPWTAWPLQVSVWRP*PKPRAG Trigger: CCCTGCCCTGGGCTTGGGCAATGGCCGCCATACACT...CACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 90 bp | CCACTCTGCACTGCCACTTCTGCAGCCCGCAGGTCGGCCACTGAGTaGCCTAGAGACACACGGATGCCTTGGGCTGTCAGTGCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: PLCTATSAARRSATE*PRDTRMPWAVSAWI Trigger: GATCCAGGCACTGACAGCCCAAGGCATCCGTGTGTCTCTAGGGCACTCAGTGGCCGACCTGCGGGCTGCAGAAGTGGCAGTGCAGAGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 90 bp | CTGCAGCCCGCAGGTCGGCCACTGAGTGCCCTAGAGACACACGGATaGCTTGGGCTGTCAGTGCCTGGATCACTTCATGGCTCCGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: LQPAGRPLSALETHG*LGLSVPGSLHGSGL Trigger: TAGACCGGAGCCATGAAGTGATCCAGGCACTGACAGCCCAAGGCATCCGTGTGTCTCTAGGGCACTCAGTGGCCGACCTGCGGGCTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CCA 90 bp | GCCCGCAGGTCGGCCACTGAGTGCCCTAGAGACACACGGATGCCTTaGGCTGTCAGTGCCTGGATCACTTCATGGCTCCGGTCTAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARRSATECPRDTRMP*AVSAWITSWLRSSS Trigger: TGAACTAGACCGGAGCCATGAAGTGATCCAGGCACTGACAGCCCAAGGCATCCGTGTGTCTCTAGGGCACTCAGTGGCCGACCTGCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | GGCTCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTCACAATGCAGACGTaGTCCAGGGGCCCATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: GSQLAPWRPAPWTAWPLQVTMQT*SRGPYV Trigger: CACATATGGGCCCCTGGACAACGTCTGCATTGTGAC...TTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | GCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTCTGCCACCCAGTGTCTaGGTGCCTGCAATGTACGCT | + |
|
Preference number: 5 (lower is better) Translates to: ACSLETSSVDCLASPSVLLPPSV*VPAMYA Trigger: AGCGTACATTGCAGGCACCAAGACACTGGGTGGCAG...AAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | GCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCACTGCCACCCAGTGTCTaGGTGCCTGCAATGTACGCT | + |
|
Preference number: 5 (lower is better) Translates to: APWRPAPWTAWPLQVSFPLPPSV*VPAMYA Trigger: AGCGTACATTGCAGGCACCAAGACACTGGGTGGCAG...TGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | GGCTCTCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGAAGGACCTTGCCAGTaGAGCCTGCTGCATGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSQLAPWRPAPWTAWPLQEGPCQ*SLLHEE Trigger: TTCCTCATGCAGCAGGCTCAACTGGCAAGGTCCTTC...TTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGAGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CCA 90 bp | TACGCTATTAGCCCATCTACCTCCACCTCCTGCTGTCCCAGTGTATaGCGGCCATTGCCCAAGCCCAGGGCAGGGACAGCATCAGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: YAISPSTSTSCCPSV*RPLPKPRAGTASVT Trigger: GGTCACTGATGCTGTCCCTGCCCTGGGCTTGGGCAATGGCCGCCATACACTGGGACAGCAGGAGGTGGAGGTAGATGGGCTAATAGCGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | CTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGGTCACAATGCAGACGTaGTCCAGGGGCCCATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPGDQLRGLPGLSKCPFQVTMQT*SRGPYV Trigger: CACATATGGGCCCCTGGACAACGTCTGCATTGTGAC...CTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | GCCTGGCCTCTCCAAGTGTCCTTTCCAGCCAAGACCCTCAGTCACGGCCCAGCTGTCACAATGCAGACGTaGTCCAGGGGCCCATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: AWPLQVSFPAKTLSHGPAVTMQT*SRGPYV Trigger: CACATATGGGCCCCTGGACAACGTCTGCATTGTGAC...AGCTGGGCCGTGACTGAGGGTCTTGGCTGGAAAGGACACTTGGAGAGGCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | TGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTCCAGCCAAGCTGCCACCCAGTGTCTaGGTGCCTGCAATGTACGCT | + |
|
Preference number: 5 (lower is better) Translates to: WRPAPWTAWPLQVSFPAKLPPSV*VPAMYA Trigger: AGCGTACATTGCAGGCACCAAGACACTGGGTGGCAG...CTTGGCTGGAAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS TCA 90 bp | GGGACCTCCACTCTTCACAGGGATCTGAGGAAGGACCTTGCCAGTTaGGCCTGCTGCATGAGGAAAACACAGCGGTGGAGAAGGGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GTSTLHRDLRKDLAS*ACCMRKTQRWRRGV Trigger: CACGCCCCTTCTCCACCGCTGTGTTTTCCTCATGCAGCAGGCTCAACTGGCAAGGTCCTTCCTCAGATCCCTGTGAAGAGTGGAGGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 90 bp | GATGGGCCCGGTGAGCAATGCGCAGAGCTGCAGGGTTGGTGTGTATaGCATCAGCAATCATCCCATAGAAGATGCAGTGGCCTGGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DGPGEQCAELQGWCV*HQQSSHRRCSGLGA Trigger: TGCCCCCAGGCCACTGCATCTTCTATGGGATGATTGCTGATGGCATACACACCAACCCTGCAGCTCTGCGCATTGCTCACCGGGCCCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 90 bp | CAGCACCAGCCCCTGGGGATGGGCCCGGTGAGCAATGCGCAGAGCTaGAGGGTTGGTGTGTATGCCATCAGCAATCATCCCATAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QHQPLGMGPVSNAQS*RVGVYAISNHPIED Trigger: ATCTTCTATGGGATGATTGCTGATGGCATACACACCAACCCTGCAGCTCTGCGCATTGCTCACCGGGCCCATCCCCAGGGGCTGGTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 90 bp | GGGAAGCGCCCAGGAGGACCTGGCACACTTATAGCTGCTGGAATGTaGCTTGTGATAAACCTCTGGTGGGGAGGTGACCAGGGTGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GKRPGGPGTLIAAGM*LVINLWWGGDQGGT Trigger: TGTCCCACCCTGGTCACCTCCCCACCAGAGGTTTATCACAAGGCACATTCCAGCAGCTATAAGTGTGCCAGGTCCTCCTGGGCGCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CCA 90 bp | GTGGCCTGGGGGCAGCTGGTCACTGGTCAGAAGCCCTACTATGCCTaGGTCACGGTGGTGGAAAGGCAACATGGCATTGAAGAGGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: VAWGQLVTGQKPYYA*VTVVERQHGIEEVS Trigger: ACTCACCTCTTCAATGCCATGTTGCCTTTCCACCACCGTGACCCAGGCATAGTAGGGCTTCTGACCAGTGACCAGCTGCCCCCAGGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CCA 90 bp | GCCGGACGCACACATCCATGGGGGCTATGCTGCCACCCAGTGTCTTaGTGCCTGCAATGTACGCTATTAGCCCATCTACCTCCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGRTHPWGLCCHPVS*CLQCTLLAHLPPPP Trigger: AGGAGGTGGAGGTAGATGGGCTAATAGCGTACATTGCAGGCACCAAGACACTGGGTGGCAGCATAGCCCCCATGGATGTGTGCGTCCGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | AGTCCCACTGTCTGTATTTATCCAAGCCACTGCCTCCCCTCCAGGAGTGATGACAGTGTATGGCGGCCATaGCCCAAGCCCAGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SPTVCIYPSHCLPSRSDDSVWRP*PKPRAG Trigger: CCCTGCCCTGGGCTTGGGCAATGGCCGCCATACACT...GTCATCACTCCTGGAGGGGAGGCAGTGGCTTGGATAAATACAGACAGTGGGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | CTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCCTTTGAAGGACCTTGCCAGTaGAGCCTGCTGCATGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LAPWRPAPWTAWPLQVSFEGPCQ*SLLHEE Trigger: TTCCTCATGCAGCAGGCTCAACTGGCAAGGTCCTTC...AAAGGACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 90 bp | GGACGCACACATCCATGGGGGCTATGCTGCCACCCAGTGTCTTGGTaGCTGCAATGTACGCTATTAGCCCATCTACCTCCACCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRTHPWGLCCHPVSW*LQCTLLAHLPPPPA Trigger: AGCAGGAGGTGGAGGTAGATGGGCTAATAGCGTACATTGCAGGCACCAAGACACTGGGTGGCAGCATAGCCCCCATGGATGTGTGCGTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CCA 90 bp | CAATCATCCCATAGAAGATGCAGTGGCCTGGGGGCAGCTGGTCACTaGTCAGAAGCCCTACTATGCCTGGGTCACGGTGGTGGAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QSSHRRCSGLGAAGH*SEALLCLGHGGGKA Trigger: TGCCTTTCCACCACCGTGACCCAGGCATAGTAGGGCTTCTGACCAGTGACCAGCTGCCCCCAGGCCACTGCATCTTCTATGGGATGATTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CCA 90 bp | AGGGCTCACAGGAGCAAGGCCTTCCGGGAAGCGCCCAGGAGGACCTaGCACACTTATAGCTGCTGGAATGTGCCTTGTGATAAACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAHRSKAFREAPRRT*HTYSCWNVPCDKPL Trigger: CAGAGGTTTATCACAAGGCACATTCCAGCAGCTATAAGTGTGCCAGGTCCTCCTGGGCGCTTCCCGGAAGGCCTTGCTCCTGTGAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | TCAGCTTGCTCCCTGGAGACCAGCTCCGTGGACTGCCTGGCCTCTCCAAGTGTCACGTCCTCCGTAGCCTaGGAGAAGTCAACACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SACSLETSSVDCLASPSVTSSVA*EKSTPN Trigger: ATTTGGTGTTGACTTCTCCAAGGCTACGGAGGACGT...GACACTTGGAGAGGCCAGGCAGTCCACGGAGCTGGTCTCCAGGGAGCAAGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS-3UTR CAA 90 bp | TTCACCAGAGATGTAAGTGGCCTGGACATGGAGAGTGTCGTCGAGCACCACAAAAGTGTATGGCGGCCATaGCCCAAGCCCAGGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FTRDVSGLDMESVVEHHKSVWRP*PKPRAG Trigger: CCCTGCCCTGGGCTTGGGCAATGGCCGCCATACACT...TTTGTGGTGCTCGACGACACTCTCCATGTCCAGGCCACTTACATCTCTGGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS CCA 90 bp | GGCACACTTATAGCTGCTGGAATGTGCCTTGTGATAAACCTCTGGTaGGGAGGTGACCAGGGTGGGACAGAAGGAGGTGACACCGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTLIAAGMCLVINLW*GGDQGGTEGGDTVG Trigger: TCCCACGGTGTCACCTCCTTCTGTCCCACCCTGGTCACCTCCCCACCAGAGGTTTATCACAAGGCACATTCCAGCAGCTATAAGTGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CCA 90 bp | CCTGGCACACTTATAGCTGCTGGAATGTGCCTTGTGATAAACCTCTaGTGGGGAGGTGACCAGGGTGGGACAGAAGGAGGTGACACCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGTLIAAGMCLVINL*WGGDQGGTEGGDTV Trigger: CACGGTGTCACCTCCTTCTGTCCCACCCTGGTCACCTCCCCACCAGAGGTTTATCACAAGGCACATTCCAGCAGCTATAAGTGTGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 90 bp | CTGCAGGGTTGGTGTGTATGCCATCAGCAATCATCCCATAGAAGATaGAGTGGCCTGGGGGCAGCTGGTCACTGGTCAGAAGCCCTACTA | + |
|
Preference number: 5 (lower is better) Translates to: LQGWCVCHQQSSHRR*SGLGAAGHWSEALL Trigger: TAGTAGGGCTTCTGACCAGTGACCAGCTGCCCCCAGGCCACTGCATCTTCTATGGGATGATTGCTGATGGCATACACACCAACCCTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CCA 90 bp | GCCCAGCTTCCTCTGCCTGCCACACCAATTCACCAGAGATGTAAGTaGCCTGGACATGGAGAGTGTCGTCGAGCACCACAAAGTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AQLPLPATPIHQRCK*PGHGECRRAPQSLH Trigger: ATGCAGACTTTGTGGTGCTCGACGACACTCTCCATGTCCAGGCCACTTACATCTCTGGTGAATTGGTGTGGCAGGCAGAGGAAGCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 |
||
| CDS-3UTR CAA 90 bp | CTCTCCAAGTGTCCTTTCCAGCCAAGACCCTCAGTCACGGCCCAGCTTCCTCTGACGTCCTCCGTAGCCTaGGAGAAGTCAACACCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LSKCPFQPRPSVTAQLPLTSSVA*EKSTPN Trigger: ATTTGGTGTTGACTTCTCCAAGGCTACGGAGGACGT...CAGAGGAAGCTGGGCCGTGACTGAGGGTCTTGGCTGGAAAGGACACTTGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138685.3 |
||
| CDS GCA 90 bp | GGATCACTTCATGGCTCCGGTCTAGTTCAGGGGCAAGTGTCACAATaGAGACGTTGTCCAGGGGCCCATATGTGGCCAACACATCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: GSLHGSGLVQGQVSQ*RRCPGAHMWPTHHE Trigger: TTCATGATGTGTTGGCCACATATGGGCCCCTGGACAACGTCTGCATTGTGACACTTGCCCCTGAACTAGACCGGAGCCATGAAGTGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CCA 72 bp | AGCGTGCCGCCACGCAGGATGCGGCAGTTGGTGAACTaGAGCACCGGGGCCCCCGCTGCGCACTGCCCGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SVPPRRMRQLVN*STGAPAAHCPL Trigger: TAGCGGGCAGTGCGCAGCGGGGGCCCCGGTGCTCCAGTTCACCAACTGCCGCATCCTGCGTGGCGGCACGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS TCA 72 bp | CCAGGATTCGGCCCCCGCGCACCCACAGATCCTCCCTaGGGAGCGTGCCGCCACGCAGGATGCGGCAGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGFGPRAPTDPP*GACRHAGCGSW Trigger: CCAACTGCCGCATCCTGCGTGGCGGCACGCTCCTCAGGGAGGATCTGTGGGTGCGCGGGGGCCGAATCCTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CCA 72 bp | GAGGTGACCAGGGTGGGACAGAAGGAGGTGACACCGTaGGACAGGAGCCTCCGGGCCACTAGGGCGACCCCC | + |
|
Preference number: 6 (lower is better) Translates to: EVTRVGQKEVTP*DRSLRATRATP Trigger: GGGGGTCGCCCTAGTGGCCCGGAGGCTCCTGTCCCACGGTGTCACCTCCTTCTGTCCCACCCTGGTCACCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CAA 72 bp | ACCTCCACCTCCTGCTGTCCCAGTGTATGGCGGCCATaGCCCAAGCCCAGGGCAGGGACAGCATCAGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: TSTSCCPSVWRP*PKPRAGTASVT Trigger: GGTCACTGATGCTGTCCCTGCCCTGGGCTTGGGCAATGGCCGCCATACACTGGGACAGCAGGAGGTGGAGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 72 bp | ACTGCCACTTCTGCAGCCCGCAGGTCGGCCACTGAGTaGCCTAGAGACACACGGATGCCTTGGGCTGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TATSAARRSATE*PRDTRMPWAVS Trigger: ACTGACAGCCCAAGGCATCCGTGTGTCTCTAGGGCACTCAGTGGCCGACCTGCGGGCTGCAGAAGTGGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 72 bp | CCCCTGGGGATGGGCCCGGTGAGCAATGCGCAGAGCTaGAGGGTTGGTGTGTATGCCATCAGCAATCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: PLGMGPVSNAQS*RVGVYAISNHP Trigger: GGGATGATTGCTGATGGCATACACACCAACCCTGCAGCTCTGCGCATTGCTCACCGGGCCCATCCCCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 72 bp | GCTTCCAGGGCCGACTCCACACTACAGCCTGTAGCCTaGAGGAAATGCCGGACGCACACATCCATGGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ASRADSTLQPVA*RKCRTHTSMGA Trigger: AGCCCCCATGGATGTGTGCGTCCGGCATTTCCTGCAGGCTACAGGCTGTAGTGTGGAGTCGGCCCTGGAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 72 bp | GCAGGTCGGCCACTGAGTGCCCTAGAGACACACGGATaGCTTGGGCTGTCAGTGCCTGGATCACTTCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGRPLSALETHG*LGLSVPGSLHG Trigger: GCCATGAAGTGATCCAGGCACTGACAGCCCAAGGCATCCGTGTGTCTCTAGGGCACTCAGTGGCCGACCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 72 bp | GCCGACTCCACACTACAGCCTGTAGCCTGCAGGAAATaGCGGACGCACACATCCATGGGGGCTATGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ADSTLQPVACRK*RTHTSMGAMLP Trigger: TGGCAGCATAGCCCCCATGGATGTGTGCGTCCGGCATTTCCTGCAGGCTACAGGCTGTAGTGTGGAGTCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CAA 90 bp | CCCACGTCCTCCGTAGCCTTGGAGAAGTCAACACCAAATCCACCGTaGATCTGCACATCGATAAAGCCAGGCGCCAGGATGCGGCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PTSSVALEKSTPNPP*ICTSIKPGARMRPP Trigger: CGGAGGCCGCATCCTGGCGCCTGGCTTTATCGATGTGCAGATCAACGGTGGATTTGGTGTTGACTTCTCCAAGGCTACGGAGGACGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS CAA 90 bp | TGCCGGACGCACACATCCATGGGGGCTATGCTGCCACCCAGTGTCTaGGTGCCTGCAATGTACGCTATTAGCCCATCTACCTCCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CRTHTSMGAMLPPSV*VPAMYAISPSTSTS Trigger: GGAGGTGGAGGTAGATGGGCTAATAGCGTACATTGCAGGCACCAAGACACTGGGTGGCAGCATAGCCCCCATGGATGTGTGCGTCCGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
||
| CDS GCA 72 bp | GGAAATGCCGGACGCACACATCCATGGGGGCTATGCTaGCACCCAGTGTCTTGGTGCCTGCAATGTACGCTA | + |
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Preference number: 6 (lower is better) Translates to: GNAGRTHPWGLC*HPVSWCLQCTL Trigger: TAGCGTACATTGCAGGCACCAAGACACTGGGTGGCAGCATAGCCCCCATGGATGTGTGCGTCCGGCATTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS GCA 72 bp | CGGGAAGCGCCCAGGAGGACCTGGCACACTTATAGCTaGTGGAATGTGCCTTGTGATAAACCTCTGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: REAPRRTWHTYS*WNVPCDKPLVG Trigger: CCCCACCAGAGGTTTATCACAAGGCACATTCCAGCAGCTATAAGTGTGCCAGGTCCTCCTGGGCGCTTCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS CCA 72 bp | CCTAGAGACACACGGATGCCTTGGGCTGTCAGTGCCTaGATCACTTCATGGCTCCGGTCTAGTTCAGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PRDTRMPWAVSA*ITSWLRSSSGA Trigger: TGCCCCTGAACTAGACCGGAGCCATGAAGTGATCCAGGCACTGACAGCCCAAGGCATCCGTGTGTCTCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS CCA 72 bp | AGGAGCAAGGCCTTCCGGGAAGCGCCCAGGAGGACCTaGCACACTTATAGCTGCTGGAATGTGCCTTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: RSKAFREAPRRT*HTYSCWNVPCD Trigger: ATCACAAGGCACATTCCAGCAGCTATAAGTGTGCCAGGTCCTCCTGGGCGCTTCCCGGAAGGCCTTGCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS GCA 72 bp | CATGGCTCCGGTCTAGTTCAGGGGCAAGTGTCACAATaGAGACGTTGTCCAGGGGCCCATATGTGGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: HGSGLVQGQVSQ*RRCPGAHMWPT Trigger: TGTTGGCCACATATGGGCCCCTGGACAACGTCTGCATTGTGACACTTGCCCCTGAACTAGACCGGAGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS CCA 72 bp | AGGGATCTGAGGAAGGACCTTGTGATAAACCTCTGGTaGGGAGGTGACCAGGGTGGGACAGAAGGAGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: RDLRKDLVINLW*GGDQGGTEGGD Trigger: GTCACCTCCTTCTGTCCCACCCTGGTCACCTCCCCACCAGAGGTTTATCACAAGGTCCTTCCTCAGATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040735.12 |
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| CDS CCA 72 bp | GAAGCGCCCAGGAGGACCTGGCACACTTATAGCTGCTaGAATGTGCCTTGTGATAAACCTCTGGTGGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: EAPRRTWHTYSC*NVPCDKPLVGR Trigger: CCTCCCCACCAGAGGTTTATCACAAGGCACATTCCAGCAGCTATAAGTGTGCCAGGTCCTCCTGGGCGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS GCA 72 bp | CCAGGAGGACCTGGCACACTTATAGCTGCTGGAATGTaGCTTGTGATAAACCTCTGGTGGGGAGGTGACCAG | + |
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Preference number: 6 (lower is better) Translates to: PGGPGTLIAAGM*LVINLWWGGDQ Trigger: CTGGTCACCTCCCCACCAGAGGTTTATCACAAGGCACATTCCAGCAGCTATAAGTGTGCCAGGTCCTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS CCA 72 bp | GATGGGCCCGGTGAGCAATGCGCAGAGCTGCAGGGTTaGTGTGTATGCCATCAGCAATCATCCCATAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: DGPGEQCAELQG*CVCHQQSSHRR Trigger: TCTTCTATGGGATGATTGCTGATGGCATACACACCAACCCTGCAGCTCTGCGCATTGCTCACCGGGCCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS CCA 72 bp | ATAGCTGCTGGAATGTGCCTTGTGATAAACCTCTGGTaGGGAGGTGACCAGGGTGGGACAGAAGGAGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: IAAGMCLVINLW*GGDQGGTEGGD Trigger: GTCACCTCCTTCTGTCCCACCCTGGTCACCTCCCCACCAGAGGTTTATCACAAGGCACATTCCAGCAGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS TCA 72 bp | ACTCTTCACAGGGATCTGAGGAAGGACCTTGCCAGTTaGGCCTGCTGCATGAGGAAAACACAGCGGTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: TLHRDLRKDLAS*ACCMRKTQRWR Trigger: TCTCCACCGCTGTGTTTTCCTCATGCAGCAGGCTCAACTGGCAAGGTCCTTCCTCAGATCCCTGTGAAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS GCA 72 bp | GGTGAGCAATGCGCAGAGCTGCAGGGTTGGTGTGTATaGCATCAGCAATCATCCCATAGAAGATGCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: GEQCAELQGWCV*HQQSSHRRCSG Trigger: GCCACTGCATCTTCTATGGGATGATTGCTGATGGCATACACACCAACCCTGCAGCTCTGCGCATTGCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS CCA 72 bp | ACACATCCATGGGGGCTATGCTGCCACCCAGTGTCTTaGTGCCTGCAATGTACGCTATTAGCCCATCTACCT | + |
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Preference number: 6 (lower is better) Translates to: THPWGLCCHPVS*CLQCTLLAHLP Trigger: AGGTAGATGGGCTAATAGCGTACATTGCAGGCACCAAGACACTGGGTGGCAGCATAGCCCCCATGGATGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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| CDS CCA 72 bp | GTGTCACAATGCAGACGTTGTCCAGGGGCCCATATGTaGCCAACACATCATGAAAAGCATTGGCTTCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: VSQCRRCPGAHM*PTHHEKHWLQR Trigger: CCTTTGAAGCCAATGCTTTTCATGATGTGTTGGCCACATATGGGCCCCTGGACAACGTCTGCATTGTGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040735.12 ENSMUST00000129523.3 ENSMUST00000138685.3 |
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