Pregenerated sensors for AMDHD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015890Ensembl transcript IDs: ENSMUST00000016034.3
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCCTCCCACCCTCATGAGCTCCAGGATCGAACTCAGGGTTTGGTaGCAAGAGACTTATCGCACTGAGGCATCTTATTGGTTCAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: SPPTLMSSRIELRVW*QETYRTEASYWFKD Trigger: ATCTTTGAACCAATAAGATGCCTCAGTGCGATAAGTCTCTTGTCACCAAACCCTGAGTTCGATCCTGGAGCTCATGAGGGTGGGAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR-3UTR TCA 90 bp | CGTTCTTTGAACATTTCCAAAAACTCCCTAGACAAAACAACTGATCCATGTCCGCTCCTCCCACCCTCATaGGCTCCAGGATCGAACTCA | + |
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Preference number: 2 (lower is better) Translates to: RSLNISKNSLDKTTDPCPLLPPS*APGSNS Trigger: TGAGTTCGATCCTGGAGCTCATGAGGGTGGGAGGAG...CGGACATGGATCAGTTGTTTTGTCTAGGGAGTTTTTGGAAATGTTCAAAGAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR CAA 90 bp | TTCACATTCATAGCATATTCATCTCAGAATGTCTGCAGCCAGTCTTaGAAAAACAACTCTACATTTCATCCCAGGTTTACCTATTTACAC | + |
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Preference number: 2 (lower is better) Translates to: FTFIAYSSQNVCSQS*KNNSTFHPRFTYLH Trigger: GTGTAAATAGGTAAACCTGGGATGAAATGTAGAGTTGTTTTTCAAAGACTGGCTGCAGACATTCTGAGATGAATATGCTATGAATGTGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR GCA 72 bp | GTCCCCAGACAAACCGTGGGGAGCAAAGACTCTGCCTaGTTCTTAGGAAATGGTACCCTTGGTCTCACTGGG | + |
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Preference number: 3 (lower is better) Translates to: VPRQTVGSKDSA*FLGNGTLGLTG Trigger: CCCAGTGAGACCAAGGGTACCATTTCCTAAGAAGCAGGCAGAGTCTTTGCTCCCCACGGTTTGTCTGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR GCA 72 bp | GTTTGTCCCCAGACAAACCGTGGGGAGCAAAGACTCTaGCTGCTTCTTAGGAAATGGTACCCTTGGTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: VCPQTNRGEQRL*LLLRKWYPWSH Trigger: GTGAGACCAAGGGTACCATTTCCTAAGAAGCAGGCAGAGTCTTTGCTCCCCACGGTTTGTCTGGGGACAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR TCA 72 bp | AGGGTAACTCTTAGACATTCTCTCCTCCCACCCTCATaGGCTCCAGGATCGAACTCAGGGTTTGGTGACAAG | + |
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Preference number: 3 (lower is better) Translates to: RVTLRHSLLPPS*APGSNSGFGDK Trigger: CTTGTCACCAAACCCTGAGTTCGATCCTGGAGCTCATGAGGGTGGGAGGAGAGAATGTCTAAGAGTTACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR TCA 72 bp | TATGTGGAGGTGAGGAGGGGTCTGGTACATAGCAGGTaGGTACGTGGAGGTCAGAGGGTAACTCTTAGACAT | + |
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Preference number: 3 (lower is better) Translates to: YVEVRRGLVHSR*VRGGQRVTLRH Trigger: ATGTCTAAGAGTTACCCTCTGACCTCCACGTACTCACCTGCTATGTACCAGACCCCTCCTCACCTCCACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR CCA 72 bp | CGTGGGGAGCAAAGACTCTGCCTGCTTCTTAGGAAATaGTACCCTTGGTCTCACTGGGGCATAACATTTGCA | + |
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Preference number: 3 (lower is better) Translates to: RGEQRLCLLLRK*YPWSHWGITFA Trigger: TGCAAATGTTATGCCCCAGTGAGACCAAGGGTACCATTTCCTAAGAAGCAGGCAGAGTCTTTGCTCCCCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR-3UTR CAA 90 bp | CAACTGATCCATGTCCGGGGTTGTCAGGCAACAATGGTAATAACAGCAAATATTTCTCTCAAGCCAAGGTaGTTTCTCCCACAAGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: QLIHVRGCQATMVITANISLKPR*FLPQGN Trigger: ATTCCCTTGTGGGAGAAACAACCTTGGCTTGAGAGA...AATATTTGCTGTTATTACCATTGTTGCCTGACAACCCCGGACATGGATCAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR GCA 72 bp | GAAATGGTACCCTTGGTCTCACTGGGGCATAACATTTaGAGAAACAAAACAGATCTCTCAAGCCAAGGTTGT | + |
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Preference number: 3 (lower is better) Translates to: EMVPLVSLGHNI*RNKTDLSSQGC Trigger: ACAACCTTGGCTTGAGAGATCTGTTTTGTTTCTGCAAATGTTATGCCCCAGTGAGACCAAGGGTACCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR CCA 72 bp | AACACAACCTCATTGTCATTGACTAAAGCGTGTCTGTaGAGGAGAGTTTCCATATCTGTGCAAGATATCAGG | + |
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Preference number: 3 (lower is better) Translates to: NTTSLSLTKACL*RRVSISVQDIR Trigger: CCTGATATCTTGCACAGATATGGAAACTCTCCTCCACAGACACGCTTTAGTCAATGACAATGAGGTTGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR-3UTR CAA 90 bp | CGTTCTTTGAACATTTCCAAAAACTCCCTAGACAAAACAACTGATCCATGTCCGGTCTGCAGCCAGTCTTaGAAAAACAACTCTACATTT | + |
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Preference number: 3 (lower is better) Translates to: RSLNISKNSLDKTTDPCPVCSQS*KNNSTF Trigger: AAATGTAGAGTTGTTTTTCAAAGACTGGCTGCAGAC...CGGACATGGATCAGTTGTTTTGTCTAGGGAGTTTTTGGAAATGTTCAAAGAACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR TCA 72 bp | AAGCCACGGAAGGGCTTTAACTTACATGGCGTTATTTaGTACAAAGCATCAAATCTTTCCTTGAAGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: KPRKGFNLHGVI*YKASNLSLKSC Trigger: ACAGCTCTTCAAGGAAAGATTTGATGCTTTGTATCAAATAACGCCATGTAAGTTAAAGCCCTTCCGTGGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CAAAGACTCTGCCTGCTTCTTAGGAAATGGTACCCTTGGTCTCACTGGGGCATAGGTGCAGCTCCCGCCTaGCGCGCTCGATTACGCGCA | + |
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Preference number: 4 (lower is better) Translates to: QRLCLLLRKWYPWSHWGIGAAPA*RARLRA Trigger: TGCGCGTAATCGAGCGCGCCAGGCGGGAGCTGCACC...TATGCCCCAGTGAGACCAAGGGTACCATTTCCTAAGAAGCAGGCAGAGTCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR TCA 90 bp | CAAAGACTCTGCCTGCTTCTTAGGAAATGGTACCCTTGGTCTCACTGGGGCATAGCGCATAAGCCGCGTTaGTGGTGGCAGCGGCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: QRLCLLLRKWYPWSHWGIAHKPR*WWQRPR Trigger: CCTTGGCCGCTGCCACCATCAACGCGGCTTATGCGC...TATGCCCCAGTGAGACCAAGGGTACCATTTCCTAAGAAGCAGGCAGAGTCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR GCA 90 bp | CACTTCCAGATAGCCATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTGCTGAGAGGCTGAGGTaGAGCTCCCGCCTGGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: HFQIAIHVHFKQVHPLGFAERLR*SSRLAR Trigger: GCGCGCCAGGCGGGAGCTGCACCTCAGCCTCTCAGC...AAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTATGGCTATCTGGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR GCA 90 bp | CAACTGATCCATGTCCGGGGTTGTCAGGCAACAATGGTAATAACAGCAAATATTCCAGCACCGCCAGGCTaGGCAGCGCAGACCCGGTCA | + |
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Preference number: 4 (lower is better) Translates to: QLIHVRGCQATMVITANIPAPPG*AAQTRS Trigger: TGACCGGGTCTGCGCTGCGCAGCCTGGCGGTGCTGG...AATATTTGCTGTTATTACCATTGTTGCCTGACAACCCCGGACATGGATCAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CAACTGATCCATGTCCGGGGTTGTCAGGCAACAATGGTAATAACAGCAAATATTTGCCCACCACCACGCTaGCGCCCTCCAGCACCGCCA | + |
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Preference number: 4 (lower is better) Translates to: QLIHVRGCQATMVITANICPPPR*RPPAPP Trigger: TGGCGGTGCTGGAGGGCGCCAGCGTGGTGGTGGGCA...AATATTTGCTGTTATTACCATTGTTGCCTGACAACCCCGGACATGGATCAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CAAAGACTCTGCCTGCTTCTTAGGAAATGGTACCCTTGGTCTCACTGGGGCATATGCACTCCACCAGCGTaGTGCCAGCCCTCATCATGC | + |
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Preference number: 4 (lower is better) Translates to: QRLCLLLRKWYPWSHWGICTPPA*CQPSSC Trigger: GCATGATGAGGGCTGGCACCACGCTGGTGGAGTGCA...TATGCCCCAGTGAGACCAAGGGTACCATTTCCTAAGAAGCAGGCAGAGTCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR GCA 90 bp | CAAAGACTCTGCCTGCTTCTTAGGAAATGGTACCCTTGGTCTCACTGGGGCATACACACCAGCACCACTTaGTGTGCGTTCTCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: QRLCLLLRKWYPWSHWGIHTSTT*CAFSSR Trigger: CCTGCTGGAGAACGCACAGCAAGTGGTGCTGGTGTG...TATGCCCCAGTGAGACCAAGGGTACCATTTCCTAAGAAGCAGGCAGAGTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CAAAGACTCTGCCTGCTTCTTAGGAAATGGTACCCTTGGTCTCACTGGGGCATACACTGCAGCCGCTGCTaGAAGGAGCAGAACAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QRLCLLLRKWYPWSHWGIHCSRC*KEQNSS Trigger: GGAACTGTTCTGCTCCTTCCAGCAGCGGCTGCAGTG...TATGCCCCAGTGAGACCAAGGGTACCATTTCCTAAGAAGCAGGCAGAGTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CACTTCCAGATAGCCATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTACCGAGCCGCAGCCATaGCAGCAATGCCTTCGTCGC | + |
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Preference number: 4 (lower is better) Translates to: HFQIAIHVHFKQVHPLGFTEPQP*QQCLRR Trigger: GCGACGAAGGCATTGCTGCCATGGCTGCGGCTCGGT...AAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTATGGCTATCTGGAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR TCA 90 bp | CAGATCTCTCAAGCCAAGGTTGTTTCTCCCACAAGGGAATTTCTGAGCTATCTGTCCGCAGTAAGTGGCTaGGAGGCTGAGGTGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QISQAKVVSPTREFLSYLSAVSG*EAEVQL Trigger: GAGCTGCACCTCAGCCTCTCAGCCACTTACTGCGGA...CAGATAGCTCAGAAATTCCCTTGTGGGAGAAACAACCTTGGCTTGAGAGATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR GCA 90 bp | CACTTCCAGATAGCCATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTGGCCATATCCGCTCTTaGACTCCACCAGCGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: HFQIAIHVHFKQVHPLGFGHIRS*TPPAWC Trigger: GCACCACGCTGGTGGAGTGCAAGAGCGGATATGGCC...AAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTATGGCTATCTGGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR GCA 90 bp | CAGATCTCTCAAGCCAAGGTTGTTTCTCCCACAAGGGAATTTCTGAGCTATCTGGTGGCTGATAGCCTGTaGTCCCAGTTCGGCCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: QISQAKVVSPTREFLSYLVADSL*SQFGPK Trigger: CTTGGGGCCGAACTGGGAGCACAGGCTATCAGCCAC...CAGATAGCTCAGAAATTCCCTTGTGGGAGAAACAACCTTGGCTTGAGAGATCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR GCA 90 bp | CAAAGACTCTGCCTGCTTCTTAGGAAATGGTACCCTTGGTCTCACTGGGGCATATTCACACAGGCCAGGTaGATGACCATCGGCATGGAA | + |
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Preference number: 4 (lower is better) Translates to: QRLCLLLRKWYPWSHWGIFTQAR*MTIGME Trigger: TTCCATGCCGATGGTCATGCACCTGGCCTGTGTGAA...TATGCCCCAGTGAGACCAAGGGTACCATTTCCTAAGAAGCAGGCAGAGTCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CACTTCCAGATAGCCATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTGCATGTAGGCTGTGGTaGGCAGGAGGACAGCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: HFQIAIHVHFKQVHPLGFACRLW*AGGQQN Trigger: GTTCTGCTGTCCTCCTGCCCACCACAGCCTACATGC...AAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTATGGCTATCTGGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CACTTCCAGATAGCCATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTTCAGCATGTAGGCTGTaGTGGGCAGGAGGACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: HFQIAIHVHFKQVHPLGFSACRL*WAGGQQ Trigger: CTGCTGTCCTCCTGCCCACCACAGCCTACATGCTGA...AAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTATGGCTATCTGGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR TCA 90 bp | CAGATCTCTCAAGCCAAGGTTGTTTCTCCCACAAGGGAATTTCTGAGCTATCTGGGTCCCCATTTCTGCTaGGTTCCTTCAGCCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QISQAKVVSPTREFLSYLGPHFC*VPSALA Trigger: TGCCAAGGCTGAAGGAACTCAGCAGAAATGGGGACC...CAGATAGCTCAGAAATTCCCTTGTGGGAGAAACAACCTTGGCTTGAGAGATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR GCA 90 bp | ATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTCCGGTGAATAGTAAACAGCACCACTTGCTGTaGGTTCTCCAGCAGGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: IHVHFKQVHPLGFPVNSKQHHLL*VLQQEA Trigger: CGCCTCCTGCTGGAGAACGCACAGCAAGTGGTGCTG...TTTACTATTCACCGGAAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR TCA 90 bp | CAGATCTCTCAAGCCAAGGTTGTTTCTCCCACAAGGGAATTTCTGAGCTATCTGAGCCTTGGCAGGTGGTaGCTGATGATGTCATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QISQAKVVSPTREFLSYLSLGRW*LMMSSA Trigger: TGCTGATGACATCATCAGTCACCACCTGCCAAGGCT...CAGATAGCTCAGAAATTCCCTTGTGGGAGAAACAACCTTGGCTTGAGAGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR GCA 90 bp | CGTTCTTTGAACATTTCCAAAAACTCCCTAGACAAAACAACTGATCCATGTCCGGCCCTCATCATGCACTaGAGCCGCTGCTGGAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RSLNISKNSLDKTTDPCPALIMH*SRCWKE Trigger: CTCCTTCCAGCAGCGGCTGCAGTGCATGATGAGGGC...CGGACATGGATCAGTTGTTTTGTCTAGGGAGTTTTTGGAAATGTTCAAAGAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CACTTCCAGATAGCCATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTCTGCAGTTTTCCCTTTaGGTACTGAGTGAGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: HFQIAIHVHFKQVHPLGFLQFSL*VLSELR Trigger: GCGGAGCTCACTCAGTACCCAAAGGGAAAACTGCAG...AAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTATGGCTATCTGGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CAAAGACTCTGCCTGCTTCTTAGGAAATGGTACCCTTGGTCTCACTGGGGCATATGGAGTTCATCCCCATaGAAGTTGATCTGTAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QRLCLLLRKWYPWSHWGIWSSSP*KLICKP Trigger: GGGCTTACAGATCAACTTCCATGGGGATGAACTCCA...TATGCCCCAGTGAGACCAAGGGTACCATTTCCTAAGAAGCAGGCAGAGTCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CAACTGATCCATGTCCGGGGTTGTCAGGCAACAATGGTAATAACAGCAAATATTCTGACTTCCTCCAGGTaGCTGATAGCCTGTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: QLIHVRGCQATMVITANILTSSR*LIACAP Trigger: GGGAGCACAGGCTATCAGCCACCTGGAGGAAGTCAG...AATATTTGCTGTTATTACCATTGTTGCCTGACAACCCCGGACATGGATCAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CACTTCCAGATAGCCATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTCCAAGGCCTCCGGCATaGACATTCTCATGTTCACAC | + |
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Preference number: 4 (lower is better) Translates to: HFQIAIHVHFKQVHPLGFPRPPA*TFSCSH Trigger: GTGTGAACATGAGAATGTCCATGCCGGAGGCCTTGG...AAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTATGGCTATCTGGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR TCA 90 bp | ATTCACATTCATAGCATATTCATCTCAGAATGTCTGCAGCCAGTCTTTGAAAAAAAGTGGCTGAGAGGCTaGGGTGCAGCTCCCGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: IHIHSIFISECLQPVFEKKWLRG*GAAPAW Trigger: CCAGGCGGGAGCTGCACCTCAGCCTCTCAGCCACTT...TTTTTCAAAGACTGGCTGCAGACATTCTGAGATGAATATGCTATGAATGTGAAT 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR GCA 90 bp | ATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTCCGGTGAATAGTAAAATGCACTGCAGCCGCTaGTGGAAGGAGCAGAACAGT | + |
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Preference number: 4 (lower is better) Translates to: IHVHFKQVHPLGFPVNSKMHCSR*WKEQNS Trigger: ACTGTTCTGCTCCTTCCAGCAGCGGCTGCAGTGCAT...TTTACTATTCACCGGAAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR GCA 90 bp | CGTTCTTTGAACATTTCCAAAAACTCCCTAGACAAAACAACTGATCCATGTCCGACTCCACCAGCGTGGTaGCAGCCCTCATCATGCACT | + |
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Preference number: 4 (lower is better) Translates to: RSLNISKNSLDKTTDPCPTPPAW*QPSSCT Trigger: AGTGCATGATGAGGGCTGGCACCACGCTGGTGGAGT...CGGACATGGATCAGTTGTTTTGTCTAGGGAGTTTTTGGAAATGTTCAAAGAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | ATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTCCGGTGAATAGTAAAGCAGCCTTCATCGGGTaGAGTTCATCCCCATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: IHVHFKQVHPLGFPVNSKAAFIG*SSSPWK Trigger: CTTCCATGGGGATGAACTCCACCCGATGAAGGCTGC...TTTACTATTCACCGGAAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CACTTCCAGATAGCCATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTCCGGAAAACTGTTTTTaGATAACAGCAGCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: HFQIAIHVHFKQVHPLGFPENCF*ITAAGP Trigger: TGGCCCTGCTGCTGTTATCCAAAAACAGTTTTCCGG...AAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTATGGCTATCTGGAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR GCA 90 bp | ATTCACATTCATAGCATATTCATCTCAGAATGTCTGCAGCCAGTCTTTGAAAAATGCCAGCCCTCATCATaGACTGCAGCCGCTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: IHIHSIFISECLQPVFEKCQPSS*TAAAAG Trigger: TCCAGCAGCGGCTGCAGTGCATGATGAGGGCTGGCA...TTTTTCAAAGACTGGCTGCAGACATTCTGAGATGAATATGCTATGAATGTGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CAACTGATCCATGTCCGGGGTTGTCAGGCAACAATGGTAATAACAGCAAATATTTTCATTGCAAACTCGTaGACTCTTTCACCCGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: QLIHVRGCQATMVITANIFIANS*TLSPAH Trigger: GTGGGCGGGTGAAAGAGTCCACGAGTTTGCAATGAA...AATATTTGCTGTTATTACCATTGTTGCCTGACAACCCCGGACATGGATCAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CAGATCTCTCAAGCCAAGGTTGTTTCTCCCACAAGGGAATTTCTGAGCTATCTGCCAGAATCCTTCTGGTaGTATCCAGATCAAAGACAC | + |
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Preference number: 4 (lower is better) Translates to: QISQAKVVSPTREFLSYLPESFW*YPDQRH Trigger: GTGTCTTTGATCTGGATACCACCAGAAGGATTCTGG...CAGATAGCTCAGAAATTCCCTTGTGGGAGAAACAACCTTGGCTTGAGAGATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR TCA 90 bp | CGTTCTTTGAACATTTCCAAAAACTCCCTAGACAAAACAACTGATCCATGTCCGTGCCCAGAGCAACTATaGCACCCTCGTCTAACATCT | + |
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Preference number: 4 (lower is better) Translates to: RSLNISKNSLDKTTDPCPCPEQL*HPRLTS Trigger: AGATGTTAGACGAGGGTGTCATAGTTGCTCTGGGCA...CGGACATGGATCAGTTGTTTTGTCTAGGGAGTTTTTGGAAATGTTCAAAGAACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR CAA 72 bp | ATAGCCATACATGTTCACTTCAAACAGGTCCATCCCTaGGGGTTTCCGGTGAATAGTAAAACCCTGACATCT | + |
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Preference number: 4 (lower is better) Translates to: IAIHVHFKQVHP*GFPVNSKTLTS Trigger: AGATGTCAGGGTTTTACTATTCACCGGAAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTATGGCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR TCA 90 bp | CAACTGATCCATGTCCGGGGTTGTCAGGCAACAATGGTAATAACAGCAAATATTCATCCCCATGGAAGTTaGTCTGTAAGCCCATCTTTT | + |
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Preference number: 4 (lower is better) Translates to: QLIHVRGCQATMVITANIHPHGS*SVSPSF Trigger: AAAAGATGGGCTTACAGATCAACTTCCATGGGGATG...AATATTTGCTGTTATTACCATTGTTGCCTGACAACCCCGGACATGGATCAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS-3UTR CCA 90 bp | ATTCACATTCATAGCATATTCATCTCAGAATGTCTGCAGCCAGTCTTTGAAAAACGTCTAACATCTTCCTaGCTCGAGGCTGCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IHIHSIFISECLQPVFEKRLTSS*LEAASA Trigger: GGCTGAAGCAGCCTCGAGCCAGGAAGATGTTAGACG...TTTTTCAAAGACTGGCTGCAGACATTCTGAGATGAATATGCTATGAATGTGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CCA 90 bp | CAACTGATCCATGTCCGGGGTTGTCAGGCAACAATGGTAATAACAGCAAATATTCTTCCAGAATCCTTCTaGTGGTATCCAGATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLIHVRGCQATMVITANILPESF*WYPDQR Trigger: TCTTTGATCTGGATACCACCAGAAGGATTCTGGAAG...AATATTTGCTGTTATTACCATTGTTGCCTGACAACCCCGGACATGGATCAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| 3UTR CAA 72 bp | AACTCCCTAGACAAAACAACTGATCCATGTCCGGGGTaGTCAGGCAACAATGGTAATAACAGCAAATATTTA | + |
|
Preference number: 4 (lower is better) Translates to: NSLDKTTDPCPG*SGNNGNNSKYL Trigger: TAAATATTTGCTGTTATTACCATTGTTGCCTGACAACCCCGGACATGGATCAGTTGTTTTGTCTAGGGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS-3UTR GCA 90 bp | ATTCACATTCATAGCATATTCATCTCAGAATGTCTGCAGCCAGTCTTTGAAAAAATGTTCCCATCTGGATaGATTGATGATGATGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: IHIHSIFISECLQPVFEKMFPSG*IDDDGV Trigger: GACGCCATCATCATCAATGCATCCAGATGGGAACAT...TTTTTCAAAGACTGGCTGCAGACATTCTGAGATGAATATGCTATGAATGTGAAT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| 3UTR CAA 72 bp | CGTAAAGATTTCTGTTTTAACACAACCTCATTGTCATaGACTAAAGCGTGTCTGTGGAGGAGAGTTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RKDFCFNTTSLS*TKACLWRRVSI Trigger: TATGGAAACTCTCCTCCACAGACACGCTTTAGTCAATGACAATGAGGTTGTGTTAAAACAGAAATCTTTACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS GCA 90 bp | CGTCAGTGCCCACCACCACGCTGGCGCCCTCCAGCACCGCCAGGCTaGGCAGCGCAGACCCGGTCAGGAAGCGCTCGCCGCGGGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: RQCPPPRWRPPAPPG*AAQTRSGSARRGHT Trigger: TGTGTGCCCGCGGCGAGCGCTTCCTGACCGGGTCTGCGCTGCGCAGCCTGGCGGTGCTGGAGGGCGCCAGCGTGGTGGTGGGCACTGACG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS GCA 90 bp | CACTCCACCAGCGTGGTGCCAGCCCTCATCATGCACTGCAGCCGCTaGTGGAAGGAGCAGAACAGTTCCTCCTCCGAGGCCTGGCGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HSTSVVPALIMHCSR*WKEQNSSSSEAWRV Trigger: CACCCGCCAGGCCTCGGAGGAGGAACTGTTCTGCTCCTTCCAGCAGCGGCTGCAGTGCATGATGAGGGCTGGCACCACGCTGGTGGAGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS CCA 90 bp | GCCGCAGCCATGGCAGCAATGCCTTCGTCGCTGACTTCCTCCAGGTaGCTGATAGCCTGTGCTCCCAGTTCGGCCCCAAGCTCGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AAAMAAMPSSLTSSR*LIACAPSSAPSSAA Trigger: GGCTGCCGAGCTTGGGGCCGAACTGGGAGCACAGGCTATCAGCCACCTGGAGGAAGTCAGCGACGAAGGCATTGCTGCCATGGCTGCGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS GCA 90 bp | CCGCTCTTGCACTCCACCAGCGTGGTGCCAGCCCTCATCATGCACTaGAGCCGCTGCTGGAAGGAGCAGAACAGTTCCTCCTCCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLLHSTSVVPALIMH*SRCWKEQNSSSSEA Trigger: GGCCTCGGAGGAGGAACTGTTCTGCTCCTTCCAGCAGCGGCTGCAGTGCATGATGAGGGCTGGCACCACGCTGGTGGAGTGCAAGAGCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS TCA 90 bp | TCCCTTTGGGTACTGAGTGAGCTCCGCAGTAAGTGGCTGAGAGGCTaGGGTGCAGCTCCCGCCTGGCGCGCTCGATTACGCGCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLWVLSELRSKWLRG*GAAPAWRARLRAAS Trigger: AGATGCTGCGCGTAATCGAGCGCGCCAGGCGGGAGCTGCACCTCAGCCTCTCAGCCACTTACTGCGGAGCTCACTCAGTACCCAAAGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS GCA 90 bp | AGCAATGCCTTCGTCGCTGACTTCCTCCAGGTGGCTGATAGCCTGTaGTCCCAGTTCGGCCCCAAGCTCGGCAGCCTTCATCGGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SNAFVADFLQVADSL*SQFGPKLGSLHRVE Trigger: CTCCACCCGATGAAGGCTGCCGAGCTTGGGGCCGAACTGGGAGCACAGGCTATCAGCCACCTGGAGGAAGTCAGCGACGAAGGCATTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS GCA 90 bp | CATATCCGCTCTTGCACTCCACCAGCGTGGTGCCAGCCCTCATCATaGACTGCAGCCGCTGCTGGAAGGAGCAGAACAGTTCCTCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: HIRSCTPPAWCQPSS*TAAAAGRSRTVPPP Trigger: CGGAGGAGGAACTGTTCTGCTCCTTCCAGCAGCGGCTGCAGTGCATGATGAGGGCTGGCACCACGCTGGTGGAGTGCAAGAGCGGATATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS TCA 90 bp | CCAAAGATCCGTGGGTGTGAGATTTTCCCAGCGCATAAGCCGCGTTaGTGGTGGCAGCGGCCAAGGCCTCCGGCATGGACATTCTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: PKIRGCEIFPAHKPR*WWQRPRPPAWTFSC Trigger: ACATGAGAATGTCCATGCCGGAGGCCTTGGCCGCTGCCACCATCAACGCGGCTTATGCGCTGGGAAAATCTCACACCCACGGATCTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS GCA 90 bp | TGCAAACTCGTGGACTCTTTCACCCGCCCACACCGGATGTGTGTGTaGGTCCACCAAACCTGGCAAGACGCATTTCCCAGAGCAATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: CKLVDSFTRPHRMCV*VHQTWQDAFPRAIN Trigger: ATTGATTGCTCTGGGAAATGCGTCTTGCCAGGTTTGGTGGACGCACACACACATCCGGTGTGGGCGGGTGAAAGAGTCCACGAGTTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS-3UTR CAA 90 bp | CACTTCCAGATAGCCATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTACACACCAGCACCACTaGCTGTGCGTTCTCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HFQIAIHVHFKQVHPLGFTHQHH*LCVLQQ Trigger: CTGCTGGAGAACGCACAGCAAGTGGTGCTGGTGTGT...AAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTATGGCTATCTGGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CAA 90 bp | ATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTCCGGTGAATAGTAAATGCTCCACCGTGAAGTaGATCCCTCCTCCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IHVHFKQVHPLGFPVNSKCSTVK*IPPPAW Trigger: CCAGGCTGGAGGAGGGATCAACTTCACGGTGGAGCA...TTTACTATTCACCGGAAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS-3UTR CAA 90 bp | CAACTGATCCATGTCCGGGGTTGTCAGGCAACAATGGTAATAACAGCAAATATTAGGCCATATCCGCTCTaGCACTCCACCAGCGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QLIHVRGCQATMVITANIRPYPL*HSTSVV Trigger: CACCACGCTGGTGGAGTGCAAGAGCGGATATGGCCT...AATATTTGCTGTTATTACCATTGTTGCCTGACAACCCCGGACATGGATCAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CAA 90 bp | CACTTCCAGATAGCCATACATGTTCACTTCAAACAGGTCCATCCCTTGGGGTTTGAAAAGCAGTACGCGTaGGGGTTGAAATCGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HFQIAIHVHFKQVHPLGFEKQYA*GLKSLP Trigger: GGGCAGCGATTTCAACCCCAACGCGTACTGCTTTTC...AAACCCCAAGGGATGGACCTGTTTGAAGTGAACATGTATGGCTATCTGGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS GCA 90 bp | AGATCAAAGACACCCTTCTCACAGAACACATCTATGTTGTCAACATaGAGGTCCCCATTTCTGCTGAGTTCCTTCAGCCTTGGCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSKTPFSQNTSMLST*RSPFLLSSFSLGRW Trigger: CCACCTGCCAAGGCTGAAGGAACTCAGCAGAAATGGGGACCTGCATGTTGACAACATAGATGTGTTCTGTGAGAAGGGTGTCTTTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CAA 90 bp | CGTTCTTTGAACATTTCCAAAAACTCCCTAGACAAAACAACTGATCCATGTCCGATGGCGTCCCCCTGCTaGCCAACTTCCAAAGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSLNISKNSLDKTTDPCPMASPC*PTSKDP Trigger: CGGATCTTTGGAAGTTGGCAAGCAGGGGGACGCCAT...CGGACATGGATCAGTTGTTTTGTCTAGGGAGTTTTTGGAAATGTTCAAAGAACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS-3UTR CAA 90 bp | CAACTGATCCATGTCCGGGGTTGTCAGGCAACAATGGTAATAACAGCAAATATTTCCCATCTGGATGCATaGATGATGATGGCGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: QLIHVRGCQATMVITANISHLDA*MMMASP Trigger: GGGGGACGCCATCATCATCAATGCATCCAGATGGGA...AATATTTGCTGTTATTACCATTGTTGCCTGACAACCCCGGACATGGATCAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CAA 90 bp | CAGATCTCTCAAGCCAAGGTTGTTTCTCCCACAAGGGAATTTCTGAGCTATCTGTCATCCCCATGGAAGTaGATCTGTAAGCCCATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QISQAKVVSPTREFLSYLSSPWK*ICKPIF Trigger: AAAGATGGGCTTACAGATCAACTTCCATGGGGATGA...CAGATAGCTCAGAAATTCCCTTGTGGGAGAAACAACCTTGGCTTGAGAGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CAA 90 bp | ATTCACATTCATAGCATATTCATCTCAGAATGTCTGCAGCCAGTCTTTGAAAAAATTACGCGCAGCATCTaGAGCTCTGTCTCCAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IHIHSIFISECLQPVFEKITRSI*SSVSRL Trigger: CAACCTGGAGACAGAGCTCAAGATGCTGCGCGTAAT...TTTTTCAAAGACTGGCTGCAGACATTCTGAGATGAATATGCTATGAATGTGAAT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS-3UTR CAA 90 bp | ATTCACATTCATAGCATATTCATCTCAGAATGTCTGCAGCCAGTCTTTGAAAAATCCGGAAAACTGTTTTaGGATAACAGCAGCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IHIHSIFISECLQPVFEKSGKLF*DNSSRA Trigger: GGCCCTGCTGCTGTTATCCAAAAACAGTTTTCCGGA...TTTTTCAAAGACTGGCTGCAGACATTCTGAGATGAATATGCTATGAATGTGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS GCA 72 bp | CCACCACCACGCTGGCGCCCTCCAGCACCGCCAGGCTaGGCAGCGCAGACCCGGTCAGGAAGCGCTCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PPPRWRPPAPPG*AAQTRSGSARR Trigger: GCGGCGAGCGCTTCCTGACCGGGTCTGCGCTGCGCAGCCTGGCGGTGCTGGAGGGCGCCAGCGTGGTGGTGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS TCA 72 bp | GTACTGAGTGAGCTCCGCAGTAAGTGGCTGAGAGGCTaGGGTGCAGCTCCCGCCTGGCGCGCTCGATTACGC | + |
|
Preference number: 6 (lower is better) Translates to: VLSELRSKWLRG*GAAPAWRARLR Trigger: GCGTAATCGAGCGCGCCAGGCGGGAGCTGCACCTCAGCCTCTCAGCCACTTACTGCGGAGCTCACTCAGTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS GCA 72 bp | GAGCAGAACAGTTCCTCCTCCGAGGCCTGGCGGGTGTaGTCCACCGTGAAGTTGATCCCTCCTCCAGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EQNSSSSEAWRV*STVKLIPPPAW Trigger: CCAGGCTGGAGGAGGGATCAACTTCACGGTGGAGCACACCCGCCAGGCCTCGGAGGAGGAACTGTTCTGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS GCA 72 bp | AGCGTGGTGCCAGCCCTCATCATGCACTGCAGCCGCTaGTGGAAGGAGCAGAACAGTTCCTCCTCCGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVVPALIMHCSR*WKEQNSSSSEA Trigger: GGCCTCGGAGGAGGAACTGTTCTGCTCCTTCCAGCAGCGGCTGCAGTGCATGATGAGGGCTGGCACCACGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS CCA 72 bp | CTCGAGGCTGCTTCAGCCTCAGCATGTAGGCTGTGGTaGGCAGGAGGACAGCAGAACACCGAGCCGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LEAASASACRLW*AGGQQNTEPQP Trigger: TGGCTGCGGCTCGGTGTTCTGCTGTCCTCCTGCCCACCACAGCCTACATGCTGAGGCTGAAGCAGCCTCGAG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS CCA 72 bp | TGGCTCGAGGCTGCTTCAGCCTCAGCATGTAGGCTGTaGTGGGCAGGAGGACAGCAGAACACCGAGCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WLEAASASACRL*WAGGQQNTEPQ Trigger: CTGCGGCTCGGTGTTCTGCTGTCCTCCTGCCCACCACAGCCTACATGCTGAGGCTGAAGCAGCCTCGAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS CAA 90 bp | CTGGCGCGCTCGATTACGCGCAGCATCTTGAGCTCTGTCTCCAGGTaGAGGCCATATCCGCTCTTGCACTCCACCAGCGTGGTGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LARSITRSILSSVSR*RPYPLLHSTSVVPA Trigger: GGCTGGCACCACGCTGGTGGAGTGCAAGAGCGGATATGGCCTCAACCTGGAGACAGAGCTCAAGATGCTGCGCGTAATCGAGCGCGCCAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS CAA 90 bp | CTGAGGTGCAGCTCCCGCCTGGCGCGCTCGATTACGCGCAGCATCTaGAGCTCTGTCTCCAGGTTGAGGCCATATCCGCTCTTGCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LRCSSRLARSITRSI*SSVSRLRPYPLLHS Trigger: GGAGTGCAAGAGCGGATATGGCCTCAACCTGGAGACAGAGCTCAAGATGCTGCGCGTAATCGAGCGCGCCAGGCGGGAGCTGCACCTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS TCA 72 bp | CGTGGGTGTGAGATTTTCCCAGCGCATAAGCCGCGTTaGTGGTGGCAGCGGCCAAGGCCTCCGGCATGGACA | + |
|
Preference number: 6 (lower is better) Translates to: RGCEIFPAHKPR*WWQRPRPPAWT Trigger: TGTCCATGCCGGAGGCCTTGGCCGCTGCCACCATCAACGCGGCTTATGCGCTGGGAAAATCTCACACCCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS GCA 72 bp | CACTCCACCAGCGTGGTGCCAGCCCTCATCATGCACTaGAGCCGCTGCTGGAAGGAGCAGAACAGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HSTSVVPALIMH*SRCWKEQNSSS Trigger: GGAGGAACTGTTCTGCTCCTTCCAGCAGCGGCTGCAGTGCATGATGAGGGCTGGCACCACGCTGGTGGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS CAA 72 bp | AGCTCCCGCCTGGCGCGCTCGATTACGCGCAGCATCTaGAGCTCTGTCTCCAGGTTGAGGCCATATCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSRLARSITRSI*SSVSRLRPYPL Trigger: GAGCGGATATGGCCTCAACCTGGAGACAGAGCTCAAGATGCTGCGCGTAATCGAGCGCGCCAGGCGGGAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS GCA 72 bp | TTCGTCGCTGACTTCCTCCAGGTGGCTGATAGCCTGTaGTCCCAGTTCGGCCCCAAGCTCGGCAGCCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FVADFLQVADSL*SQFGPKLGSLH Trigger: ATGAAGGCTGCCGAGCTTGGGGCCGAACTGGGAGCACAGGCTATCAGCCACCTGGAGGAAGTCAGCGACGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS CCA 72 bp | ATGGCAGCAATGCCTTCGTCGCTGACTTCCTCCAGGTaGCTGATAGCCTGTGCTCCCAGTTCGGCCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: MAAMPSSLTSSR*LIACAPSSAPS Trigger: GCTTGGGGCCGAACTGGGAGCACAGGCTATCAGCCACCTGGAGGAAGTCAGCGACGAAGGCATTGCTGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS CAA 72 bp | TTGAGCTCTGTCTCCAGGTTGAGGCCATATCCGCTCTaGCACTCCACCAGCGTGGTGCCAGCCCTCATCATG | + |
|
Preference number: 6 (lower is better) Translates to: LSSVSRLRPYPL*HSTSVVPALIM Trigger: CATGATGAGGGCTGGCACCACGCTGGTGGAGTGCAAGAGCGGATATGGCCTCAACCTGGAGACAGAGCTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS GCA 72 bp | GTGAATGTCCATGTACGTGGCCCCTGCCAACTTCATTaGAAACTCGTGGACTCTTTCACCCGCCCACACCGG | + |
|
Preference number: 6 (lower is better) Translates to: VNVHVRGPCQLH*KLVDSFTRPHR Trigger: CCGGTGTGGGCGGGTGAAAGAGTCCACGAGTTTGCAATGAAGTTGGCAGGGGCCACGTACATGGACATTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS CAA 72 bp | GGTGAATGTCCATGTACGTGGCCCCTGCCAACTTCATaGCAAACTCGTGGACTCTTTCACCCGCCCACACCG | + |
|
Preference number: 6 (lower is better) Translates to: GECPCTWPLPTS*QTRGLFHPPTP Trigger: CGGTGTGGGCGGGTGAAAGAGTCCACGAGTTTGCAATGAAGTTGGCAGGGGCCACGTACATGGACATTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS CAA 72 bp | TCGATTACGCGCAGCATCTTGAGCTCTGTCTCCAGGTaGAGGCCATATCCGCTCTTGCACTCCACCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SITRSILSSVSR*RPYPLLHSTSV Trigger: CACGCTGGTGGAGTGCAAGAGCGGATATGGCCTCAACCTGGAGACAGAGCTCAAGATGCTGCGCGTAATCGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS CCA 72 bp | ATGTACGTGGCCCCTGCCAACTTCATTGCAAACTCGTaGACTCTTTCACCCGCCCACACCGGATGTGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: MYVAPANFIANS*TLSPAHTGCVC Trigger: ACACACACATCCGGTGTGGGCGGGTGAAAGAGTCCACGAGTTTGCAATGAAGTTGGCAGGGGCCACGTACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS CAA 90 bp | GCCAGGTGCATGACCATCGGCATGGAAAAGCAGTACGCGTTGGGGTaGAAATCGCTGCCCAGAGCAACTATGACACCCTCGTCTAACATC | + |
|
Preference number: 6 (lower is better) Translates to: ARCMTIGMEKQYALG*KSLPRATMTPSSNI Trigger: GATGTTAGACGAGGGTGTCATAGTTGCTCTGGGCAGCGATTTCAACCCCAACGCGTACTGCTTTTCCATGCCGATGGTCATGCACCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS TCA 72 bp | GCATGGACATTCTCATGTTCACACAGGCCAGGTGCATaGCCATCGGCATGGAAAAGCAGTACGCGTTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: AWTFSCSHRPGA*PSAWKSSTRWG Trigger: ACCCCAACGCGTACTGCTTTTCCATGCCGATGGTCATGCACCTGGCCTGTGTGAACATGAGAATGTCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS CCA 72 bp | CGCCCACACCGGATGTGTGTGTGCGTCCACCAAACCTaGCAAGACGCATTTCCCAGAGCAATCAATTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RPHRMCVCVHQT*QDAFPRAINSF Trigger: GAAAGAATTGATTGCTCTGGGAAATGCGTCTTGCCAGGTTTGGTGGACGCACACACACATCCGGTGTGGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS CAA 72 bp | ATGACCATCGGCATGGAAAAGCAGTACGCGTTGGGGTaGAAATCGCTGCCCAGAGCAACTATGACACCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: MTIGMEKQYALG*KSLPRATMTPS Trigger: CGAGGGTGTCATAGTTGCTCTGGGCAGCGATTTCAACCCCAACGCGTACTGCTTTTCCATGCCGATGGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS CAA 72 bp | AGGTGCATGACCATCGGCATGGAAAAGCAGTACGCGTaGGGGTTGAAATCGCTGCCCAGAGCAACTATGACA | + |
|
Preference number: 6 (lower is better) Translates to: RCMTIGMEKQYA*GLKSLPRATMT Trigger: TGTCATAGTTGCTCTGGGCAGCGATTTCAACCCCAACGCGTACTGCTTTTCCATGCCGATGGTCATGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
||
| CDS GCA 72 bp | GCCTCCAAACTGGTAAATCAAATGTTCCCATCTGGATaGATTGATGATGATGGCGTCCCCCTGCTTGCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ASKLVNQMFPSG*IDDDGVPLLAN Trigger: GTTGGCAAGCAGGGGGACGCCATCATCATCAATGCATCCAGATGGGAACATTTGATTTACCAGTTTGGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS CAA 90 bp | GTGGTATCCAGATCAAAGACACCCTTCTCACAGAACACATCTATGTaGTCAACATGCAGGTCCCCATTTCTGCTGAGTTCCTTCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: VVSRSKTPFSQNTSM*STCRSPFLLSSFSL Trigger: AAGGCTGAAGGAACTCAGCAGAAATGGGGACCTGCATGTTGACAACATAGATGTGTTCTGTGAGAAGGGTGTCTTTGATCTGGATACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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| CDS GCA 72 bp | ACACCCTTCTCACAGAACACATCTATGTTGTCAACATaGAGGTCCCCATTTCTGCTGAGTTCCTTCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: TPFSQNTSMLST*RSPFLLSSFSL Trigger: AAGGCTGAAGGAACTCAGCAGAAATGGGGACCTGCATGTTGACAACATAGATGTGTTCTGTGAGAAGGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016034.3 |
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