Pregenerated sensors for AMBN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029288Ensembl transcript IDs: ENSMUST00000031226.9, ENSMUST00000198265.5
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ACTAAGTGCTTTTGTGTAGAGAAAGAAGCAGTGTCACATTTCCTGGGCATAATAAGCAACAAGGTACTATaGGGACAAAGCTGGAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: TKCFCVEKEAVSHFLGIISNKVL*GQSWKA Trigger: AGCTTTCCAGCTTTGTCCCCATAGTACCTTGTTGCT...TATTATGCCCAGGAAATGTGACACTGCTTCTTTCTCTACACAAAAGCACTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
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| 3UTR-3UTR GCA 90 bp | TTTGATAAGAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTAAGCTGGAAAGCTTGTaGATACACAAAGTAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: FDKNGSKKGPTLFLATCIKLESL*IHKVAA Trigger: AGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTT...AATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTCTTATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| 3UTR-3UTR GCA 90 bp | AATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAAGCTGGAAAGCTTGTaGATACACAAAGTAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: NICLVLLTPSLRKDSKCFKLESL*IHKVAA Trigger: AGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTT...AAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| 3UTR-3UTR CCA 90 bp | GAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTTATTAATACTATGGGGACAAAGCTaGAAAGCTTGTGCATACACA | + |
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Preference number: 2 (lower is better) Translates to: EWKQEGTYTISSHLYLLILWGQS*KACAYT Trigger: TGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAG...TATTAATAAATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| 3UTR CCA 72 bp | CGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATaGGGACAAAGCTGGAAAGCTTGTGCATACACAAAG | + |
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Preference number: 3 (lower is better) Translates to: RKDSKCFSNKVL*GQSWKACAYTK Trigger: CTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| 3UTR-3UTR CAA 90 bp | TTTGATAAGAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTACAAAGCTGGAAAGCTaGTGCATACACAAAGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: FDKNGSKKGPTLFLATCITKLES*CIHKVA Trigger: AGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGT...AATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTCTTATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR TCA 90 bp | GGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGTTGGGTGCATTGGAGGCTaGGGCCCTGGCTTCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: GDKAGKLVHTQSSCYVKVGCIGG*GPGFWG Trigger: ACCCCAGAAGCCAGGGCCTCAGCCTCCAATGCACCC...AACCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | ATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGTGGAGGCTGAGGCCCTaGCTTCTGGGGTGTGACCTG | + |
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Preference number: 4 (lower is better) Translates to: MGTKLESLCIHKVAAMSRWRLRP*LLGCDL Trigger: CAGGTCACACCCCAGAAGCCAGGGCCTCAGCCTCCA...CCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | CACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGGGACTGGAGGCTGAGGCCCTaGCTTCTGGGGTGTGACCTG | + |
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Preference number: 4 (lower is better) Translates to: HLHCGRIVSVLATRYYGDWRLRP*LLGCDL Trigger: CAGGTCACACCCCAGAAGCCAGGGCCTCAGCCTCCA...GTCCCCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | GGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGTTGACCTGGACACCGGTTaGAGCAGTGGGCTGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: GDKAGKLVHTQSSCYVKVDLDTG*SSGLEE Trigger: TTCCTCCAGCCCACTGCTGCAACCGGTGTCCAGGTC...AACCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | ACAAGGTACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCCCCTGCAGGACCCCTTaGCATACTGGGGATGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: TRYYGDKAGKLVHTQSSCPCRTP*HTGDVV Trigger: GACCACATCCCCAGTATGGCAAGGGGTCCTGCAGGG...GCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTACCTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | TACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCGACCTGGACACCGGTTaGAGCAGTGGGCTGGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: YYGDKAGKLVHTQSSCYVDLDTG*SSGLEE Trigger: TTCCTCCAGCCCACTGCTGCAACCGGTGTCCAGGTC...GACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | GGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGTTATCAGCTCTCCTTCCTaGAAGGGCAGCTGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GDKAGKLVHTQSSCYVKVISSPS*KGSCPG Trigger: CCCTGGACAGCTGCCCTTGCAGGAAGGAGAGCTGAT...AACCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | ATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGATCAGCTCTCCTTCCTaGAAGGGCAGCTGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: MGTKLESLCIHKVAAMSRISSPS*KGSCPG Trigger: CCCTGGACAGCTGCCCTTGCAGGAAGGAGAGCTGAT...CCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | TACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCCCCTGCAGGACCCCTTaGCATACTGGGGATGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: YYGDKAGKLVHTQSSCYVPCRTP*HTGDVV Trigger: GACCACATCCCCAGTATGGCAAGGGGTCCTGCAGGG...GACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | ACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGGGAGGTGATCAGTGGGTCTaGAGCTGCAGGGGTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: TPSLRKDSKCFSNKVLWGGDQWV*SCRGDS Trigger: GGAGTCACCCCTGCAGCTGCAGACCCACTGATCACC...TCCCCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | ATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGCACCGGTTGCAGCAGTaGGCTGGAGGAAGGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: MGTKLESLCIHKVAAMSRHRLQQ*AGGRVS Trigger: TGAAACCCTTCCTCCAGCCCACTGCTGCAACCGGTG...CCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | GGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGTTTGGTGGGTTTTCGGATaGTGCCACCTGCGGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: GDKAGKLVHTQSSCYVKVWWVFG*CHLRLI Trigger: GATGAGCCGCAGGTGGCACCATCCGAAAACCCACCA...AACCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | TACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCTGCCAGGAGGTGCCATaGCTTGAGCCCCAGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: YYGDKAGKLVHTQSSCYVCQEVP*LEPQVV Trigger: AACAACCTGGGGCTCAAGGCATGGCACCTCCTGGCA...GACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | GTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTAGGTGATCAGTGGGTCTaGAGCTGCAGGGGTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: VLLTPSLRKDSKCFSNKVGDQWV*SCRGDS Trigger: GGAGTCACCCCTGCAGCTGCAGACCCACTGATCACC...TACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | TACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCCACCGGTTGCAGCAGTaGGCTGGAGGAAGGGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: YYGDKAGKLVHTQSSCYVHRLQQ*AGGRVS Trigger: TGAAACCCTTCCTCCAGCCCACTGCTGCAACCGGTG...GACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | CACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGGGACGTTGGCCTCTTGCAGTaGAGAGCCTTCTGGACCTTC | + |
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Preference number: 4 (lower is better) Translates to: HLHCGRIVSVLATRYYGDVGLLQ*RAFWTF Trigger: GAAGGTCCAGAAGGCTCTCCACTGCAAGAGGCCAAC...GTCCCCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | GGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGTTGCAAGAAGTCCTGCATaGGCCCCAGGTGCCATTTGT | + |
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Preference number: 4 (lower is better) Translates to: GDKAGKLVHTQSSCYVKVARSPA*APGAIC Trigger: ACAAATGGCACCTGGGGCCCATGCAGGACTTCTTGC...AACCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR TCA 90 bp | TTTGATAAGAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTGGGTGCATTGGAGGCTaGGGCCCTGGCTTCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: FDKNGSKKGPTLFLATCIGCIGG*GPGFWG Trigger: ACCCCAGAAGCCAGGGCCTCAGCCTCCAATGCACCC...AATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTCTTATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | GTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTAAAACGCCATGCGTTGTaGACCTGGGGCTGGTGCACT | + |
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Preference number: 4 (lower is better) Translates to: VLLTPSLRKDSKCFSNKVKRHAL*TWGWCT Trigger: AGTGCACCAGCCCCAGGTGCACAACGCATGGCGTTT...TACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | TACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCGAAGGGTTTCAGTCCTaGCTGGTGAGGCTGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: YYGDKAGKLVHTQSSCYVEGFQS*LVRLQG Trigger: TCCTTGCAGCCTCACCAGCCAGGACTGAAACCCTTC...GACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | ATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGTTGTGCACCTGGGGCTaGTGCACTTTGTTTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: MGTKLESLCIHKVAAMSRLCTWG*CTLFPG Trigger: ACCTGGAAACAAAGTGCACCAGCCCCAGGTGCACAA...CCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | GGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGTTCATGCGTTGTGCACCTaGGGCTGGTGCACTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: GDKAGKLVHTQSSCYVKVHALCT*GWCTLF Trigger: AAACAAAGTGCACCAGCCCCAGGTGCACAACGCATG...AACCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR TCA 90 bp | ATTAATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTCTGGCTTCTGGGGTGTaGCCTGGACACCGGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: INICLVLLTPSLRKDSKCLASGV*PGHRLQ Trigger: CTGCAACCGGTGTCCAGGTCACACCCCAGAAGCCAG...ACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR TCA 90 bp | ATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGTGTCTGGGGACATGGTaGTATCCATGGTTGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: MGTKLESLCIHKVAAMSRCLGTW*YPWLLL Trigger: GAGAAGCAACCATGGATATCACCATGTCCCCAGACA...CCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | TTTGATAAGAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTAGCCATGCCAGGAGGTaGCATGCCTTGAGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FDKNGSKKGPTLFLATCISHARR*HALSPR Trigger: CCTGGGGCTCAAGGCATGGCACCTCCTGGCATGGCT...AATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTCTTATCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | AATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCCATGCCAGGAGGTaGCATGCCTTGAGCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NICLVLLTPSLRKDSKCFSHARR*HALSPR Trigger: CCTGGGGCTCAAGGCATGGCACCTCCTGGCATGGCT...AAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | TACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCGGTGATATCCATGGTTaGTTCTCCATCACCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: YYGDKAGKLVHTQSSCYVGDIHG*FSITQG Trigger: CCCCTGGGTGATGGAGAAGCAACCATGGATATCACC...GACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | ACAAGGTACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCCCTTGGTCCTATCCATaGGAAAGAGTTATGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TRYYGDKAGKLVHTQSSCPWSYP*ERVMRW Trigger: CCACCGCATAACTCTTTCCCATGGATAGGACCAAGG...GCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTACCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | GGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGTTCCTTGGTCCTATCCATaGGAAAGAGTTATGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GDKAGKLVHTQSSCYVKVPWSYP*ERVMRW Trigger: CCACCGCATAACTCTTTCCCATGGATAGGACCAAGG...AACCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | CACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGGGACTGCAAGGATGGCTGCTaGGTTTCATGTTCCCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: HLHCGRIVSVLATRYYGDCKDGC*VSCSLG Trigger: ACCAAGGGAACATGAAACCCAGCAGCCATCCTTGCA...GTCCCCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
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| CDS-3UTR CCA 90 bp | ACAAGGTACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTGGCTGCTGAGTGTCTaGGGACATGGTGATATCCAT | + |
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Preference number: 4 (lower is better) Translates to: TRYYGDKAGKLVHTQSSCWLLSV*GHGDIH Trigger: ATGGATATCACCATGTCCCCAGACACTCAGCAGCCA...GCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTACCTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR TCA 90 bp | GAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTTATTAATACTGGCTTCTGGGGTGTaGCCTGGACACCGGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: EWKQEGTYTISSHLYLLILASGV*PGHRLQ Trigger: CTGCAACCGGTGTCCAGGTCACACCCCAGAAGCCAG...TATTAATAAATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR TCA 90 bp | ACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGGGAGTCTCCTCCCTTGGGTaGATTCTGATTCAGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TPSLRKDSKCFSNKVLWGVSSLG*ILIQSP Trigger: AGGAGACTGAATCAGAATTCACCCAAGGGAGGAGAC...TCCCCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR TCA 90 bp | ATTAATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTGGTAGCAGTGGCTGCTaGGTGTCTGGGGACATGGTG | + |
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Preference number: 4 (lower is better) Translates to: INICLVLLTPSLRKDSKCGSSGC*VSGDMV Trigger: CACCATGTCCCCAGACACTCAGCAGCCACTGCTACC...ACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR TCA 90 bp | TTTGATAAGAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTGGTAGCAGTGGCTGCTaGGTGTCTGGGGACATGGTG | + |
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Preference number: 4 (lower is better) Translates to: FDKNGSKKGPTLFLATCIGSSGC*VSGDMV Trigger: CACCATGTCCCCAGACACTCAGCAGCCACTGCTACC...AATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTCTTATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR GCA 90 bp | GTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACATGGGAAAGAGTTATaGGGTGGGAGAAGTCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: VLLTPSLRKDSKCFSNKVHGKEL*GGRSPC Trigger: GCACGGACTTCTCCCACCGCATAACTCTTTCCCATG...TACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | TTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGAAGGGTTTCAGTCCTaGCTGGTGAGGCTGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LVLLTPSLRKDSKCFSNKEGFQS*LVRLQG Trigger: TCCTTGCAGCCTCACCAGCCAGGACTGAAACCCTTC...CTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS-3UTR CCA 90 bp | CAAGTGCTGACACTTAGACTTGCTCTGATATCATTGATAGTATTTCTAAGTCACCTGTCCAGGGTGCATTaGAGGCTGAGGCCCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVLTLRLALISLIVFLSHLSRVH*RLRPWL Trigger: AAGCCAGGGCCTCAGCCTCCAATGCACCCTGGACAG...GTGACTTAGAAATACTATCAATGATATCAGAGCAAGTCTAAGTGTCAGCACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
||
| CDS-3UTR CCA 90 bp | ATTAATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTCTGTCCAGGGTGCATTaGAGGCTGAGGCCCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: INICLVLLTPSLRKDSKCLSRVH*RLRPWL Trigger: AAGCCAGGGCCTCAGCCTCCAATGCACCCTGGACAG...ACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | TTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGGCAAGAAGTCCTGCATaGGCCCCAGGTGCCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTPSLRKDSKCFSNKVLWARSPA*APGAIC Trigger: ACAAATGGCACCTGGGGCCCATGCAGGACTTCTTGC...CCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | ACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGGGATGGGGATGTGGTCATTaGGGAAAGCAAGAAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPSLRKDSKCFSNKVLWGWGCGH*GKQEVL Trigger: CAGGACTTCTTGCTTTCCCCAATGACCACATCCCCA...TCCCCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | TACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCGCCATACTGGGGATGTaGTCATTGGGGAAAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YYGDKAGKLVHTQSSCYVAILGM*SLGKAR Trigger: TCTTGCTTTCCCCAATGACCACATCCCCAGTATGGC...GACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR TCA 90 bp | ACTAAGTGCTTTTGTGTAGAGAAAGAAGCAGTGTCACATTTCCTGGGCATAATACTGCTAATTCAGGGGTaGTCAGTGGGTCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKCFCVEKEAVSHFLGIILLIQG*SVGLQL Trigger: CAGCTGCAGACCCACTGATCACCCCTGAATTAGCAG...TATTATGCCCAGGAAATGTGACACTGCTTCTTTCTCTACACAAAAGCACTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
||
| CDS-3UTR GCA 90 bp | TTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGCATGGGAAAGAGTTATaGGGTGGGAGAAGTCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLLTPSLRKDSKCFSNKHGKEL*GGRSPC Trigger: GCACGGACTTCTCCCACCGCATAACTCTTTCCCATG...CTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | TTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGTTGTGCACCTGGGGCTaGTGCACTTTGTTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTPSLRKDSKCFSNKVLWLCTWG*CTLFPG Trigger: ACCTGGAAACAAAGTGCACCAGCCCCAGGTGCACAA...CCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR TCA 90 bp | TTTGATAAGAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTCTGCTAATTCAGGGGTaGTCAGTGGGTCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FDKNGSKKGPTLFLATCILLIQG*SVGLQL Trigger: CAGCTGCAGACCCACTGATCACCCCTGAATTAGCAG...AATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTCTTATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR GCA 90 bp | GAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTTATTAATATGCCAGGAGGTGCCATaGCTTGAGCCCCAGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EWKQEGTYTISSHLYLLICQEVP*LEPQVV Trigger: AACAACCTGGGGCTCAAGGCATGGCACCTCCTGGCA...TATTAATAAATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR GCA 90 bp | GAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTTATTAATAAAACGCCATGCGTTGTaGACCTGGGGCTGGTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: EWKQEGTYTISSHLYLLIKRHAL*TWGWCT Trigger: AGTGCACCAGCCCCAGGTGCACAACGCATGGCGTTT...TATTAATAAATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | ACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGGGAGGTTTCATGTTCCCTTaGTCCTATCCATGGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPSLRKDSKCFSNKVLWGGFMFP*SYPWER Trigger: TCTTTCCCATGGATAGGACCAAGGGAACATGAAACC...TCCCCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | GAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTTATTAATATGGTGGGTTTTCGGATaGTGCCACCTGCGGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EWKQEGTYTISSHLYLLIWWVFG*CHLRLI Trigger: GATGAGCCGCAGGTGGCACCATCCGAAAACCCACCA...TATTAATAAATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | ATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGAGCAAAATCCATTATTaGTACCTCAGGTGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MGTKLESLCIHKVAAMSRSKIHY*YLRCWW Trigger: CCACCAACACCTGAGGTACCAATAATGGATTTTGCT...CCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | AATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTGTTGGCCTCTTGCAGTaGAGAGCCTTCTGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NICLVLLTPSLRKDSKCFVGLLQ*RAFWTF Trigger: GAAGGTCCAGAAGGCTCTCCACTGCAAGAGGCCAAC...AAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR GCA 90 bp | AATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTGGTGATATCCATGGTTaGTTCTCCATCACCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NICLVLLTPSLRKDSKCFGDIHG*FSITQG Trigger: CCCCTGGGTGATGGAGAAGCAACCATGGATATCACC...AAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | TTTAGCAACAAGGTACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGGGTTTCATGTTCCCTTaGTCCTATCCATGGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSNKVLWGQSWKACAYTKGFMFP*SYPWER Trigger: TCTTTCCCATGGATAGGACCAAGGGAACATGAAACC...CTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTACCTTGTTGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | CAAGTGCTGACACTTAGACTTGCTCTGATATCATTGATAGTATTTCTAAGTCACTACCTCAGGTGTTGGTaGGTTTTCGGATGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVLTLRLALISLIVFLSHYLRCW*VFGWCH Trigger: GTGGCACCATCCGAAAACCCACCAACACCTGAGGTA...GTGACTTAGAAATACTATCAATGATATCAGAGCAAGTCTAAGTGTCAGCACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
||
| CDS-3UTR CCA 90 bp | TTTGATAAGAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTTACCTCAGGTGTTGGTaGGTTTTCGGATGGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FDKNGSKKGPTLFLATCIYLRCW*VFGWCH Trigger: GTGGCACCATCCGAAAACCCACCAACACCTGAGGTA...AATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTCTTATCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | ACTAAGTGCTTTTGTGTAGAGAAAGAAGCAGTGTCACATTTCCTGGGCATAATATGGCTGCTGAGTGTCTaGGGACATGGTGATATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKCFCVEKEAVSHFLGIIWLLSV*GHGDIH Trigger: ATGGATATCACCATGTCCCCAGACACTCAGCAGCCA...TATTATGCCCAGGAAATGTGACACTGCTTCTTTCTCTACACAAAAGCACTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
||
| CDS-3UTR TCA 90 bp | CTATACCACCAAGTGCTGACACTTAGACTTGCTCTGATATCATTGATAGTATTTGTCTCCTCCCTTGGGTaGATTCTGATTCAGTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LYHQVLTLRLALISLIVFVSSLG*ILIQSP Trigger: AGGAGACTGAATCAGAATTCACCCAAGGGAGGAGAC...AAATACTATCAATGATATCAGAGCAAGTCTAAGTGTCAGCACTTGGTGGTATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
||
| CDS-3UTR GCA 90 bp | ATTAATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTGGGAGAGGTGGGGGATaGACAGGCAAAGAATATTCA | + |
|
Preference number: 4 (lower is better) Translates to: INICLVLLTPSLRKDSKCGRGGG*TGKEYS Trigger: TGAATATTCTTTGCCTGTGCATCCCCCACCTCTCCC...ACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | CACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGGGACCACGGTTGGAAATTGTaGATCAGCAAAATCCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: HLHCGRIVSVLATRYYGDHGWKL*ISKIHY Trigger: ATAATGGATTTTGCTGATCCACAATTTCCAACCGTG...GTCCCCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | AATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTTGGGGATGTGGTCATTaGGGAAAGCAAGAAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NICLVLLTPSLRKDSKCFWGCGH*GKQEVL Trigger: CAGGACTTCTTGCTTTCCCCAATGACCACATCCCCA...AAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | CAAGTGCTGACACTTAGACTTGCTCTGATATCATTGATAGTATTTCTAAGTCACGCCATACTGGGGATGTaGTCATTGGGGAAAGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QVLTLRLALISLIVFLSHAILGM*SLGKAR Trigger: TCTTGCTTTCCCCAATGACCACATCCCCAGTATGGC...GTGACTTAGAAATACTATCAATGATATCAGAGCAAGTCTAAGTGTCAGCACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
||
| CDS-3UTR CCA 90 bp | GAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTTATTAATACATGCGTTGTGCACCTaGGGCTGGTGCACTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EWKQEGTYTISSHLYLLIHALCT*GWCTLF Trigger: AAACAAAGTGCACCAGCCCCAGGTGCACAACGCATG...TATTAATAAATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | TACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCGAATATTCATACTGCTaGGTTTCATGTTCCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YYGDKAGKLVHTQSSCYVEYSYC*VSCSLG Trigger: ACCAAGGGAACATGAAACCCAGCAGTATGAATATTC...GACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198265.5 |
||
| CDS-3UTR TCA 90 bp | ATTAATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTCCCTTGGGTGAATTCTaGTTCAGTCTCCTAAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: INICLVLLTPSLRKDSKCPLGEF*FSLLRV Trigger: AACCCTTAGGAGACTGAATCAGAATTCACCCAAGGG...ACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR GCA 90 bp | TTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGGTGGGAGAAGTCCGTaGAACCATAAACTATTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLLTPSLRKDSKCFSNKGGRSP*NHKLLS Trigger: ACTTAATAGTTTATGGTTGCACGGACTTCTCCCACC...CTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR TCA 90 bp | TTTGATAAGAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTTTTCTTCTGAACTCATaGAGCCAATTCTGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FDKNGSKKGPTLFLATCIFLLNS*SQFWQE Trigger: CTCCTGCCAGAATTGGCTTCATGAGTTCAGAAGAAA...AATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTCTTATCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR TCA 90 bp | GAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTTATTAATACCCTTGGGTGAATTCTaGTTCAGTCTCCTAAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EWKQEGTYTISSHLYLLIPLGEF*FSLLRV Trigger: AACCCTTAGGAGACTGAATCAGAATTCACCCAAGGG...TATTAATAAATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR GCA 90 bp | ATTAATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTAGAATACTGAGAAAGTaGGTTGAGTCCCTGCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: INICLVLLTPSLRKDSKCRILRK*VESLQA Trigger: AGCTTGCAGGGACTCAACGCACTTTCTCAGTATTCT...ACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR GCA 90 bp | AATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTGGTGGGAGAAGTCCGTaGAACCATAAACTATTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NICLVLLTPSLRKDSKCFGGRSP*NHKLLS Trigger: ACTTAATAGTTTATGGTTGCACGGACTTCTCCCACC...AAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | ATTAATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTAGCAAAATCCATTATTaGTACCTCAGGTGTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: INICLVLLTPSLRKDSKCSKIHY*YLRCWW Trigger: CCACCAACACCTGAGGTACCAATAATGGATTTTGCT...ACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CCA 90 bp | TTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGCACGGTTGGAAATTGTaGATCAGCAAAATCCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLLTPSLRKDSKCFSNKHGWKL*ISKIHY Trigger: ATAATGGATTTTGCTGATCCACAATTTCCAACCGTG...CTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR GCA 90 bp | AATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAAAGAATATTCATACTaGTGGGTTTCATGTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NICLVLLTPSLRKDSKCFKEYSY*WVSCSL Trigger: AAGGGAACATGAAACCCAGCAGTATGAATATTCTTT...AAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198265.5 |
||
| CDS CCA 90 bp | TTCCTGCAAGGGCAGCTGTCCAGGGTGCATTGGAGGCTGAGGCCCTaGCTTCTGGGGTGTGACCTGGACACCGGTTGCAGCAGTGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLQGQLSRVHWRLRP*LLGCDLDTGCSSGL Trigger: CAGCCCACTGCTGCAACCGGTGTCCAGGTCACACCCCAGAAGCCAGGGCCTCAGCCTCCAATGCACCCTGGACAGCTGCCCTTGCAGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 90 bp | CTCAGGTGTTGGTGGGTTTTCGGATGGTGCCACCTGCGGCTCATCTaGTGCTATCAGCTCTCCTTCCTGCAAGGGCAGCTGTCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRCWWVFGWCHLRLI*CYQLSFLQGQLSRV Trigger: CACCCTGGACAGCTGCCCTTGCAGGAAGGAGAGCTGATAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS GCA 90 bp | AGGTGTTGGTGGGTTTTCGGATGGTGCCACCTGCGGCTCATCTGGTaGTATCAGCTCTCCTTCCTGCAAGGGCAGCTGTCCAGGGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RCWWVFGWCHLRLIW*YQLSFLQGQLSRVH Trigger: ATGCACCCTGGACAGCTGCCCTTGCAGGAAGGAGAGCTGATAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS GCA 90 bp | ATTATTGGTACCTCAGGTGTTGGTGGGTTTTCGGATGGTGCCACCTaGGGCTCATCTGGTGCTATCAGCTCTCCTTCCTGCAAGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IIGTSGVGGFSDGAT*GSSGAISSPSCKGS Trigger: GCTGCCCTTGCAGGAAGGAGAGCTGATAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAGGTACCAATAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | CACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGGGACGCCCTGCAGGACCCCTaGCCATACTGGGGATGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HLHCGRIVSVLATRYYGDALQDP*PYWGCG Trigger: ACCACATCCCCAGTATGGCAAGGGGTCCTGCAGGGC...GTCCCCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 90 bp | AGCAAAATCCATTATTGGTACCTCAGGTGTTGGTGGGTTTTCGGATaGTGCCACCTGCGGCTCATCTGGTGCTATCAGCTCTCCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SKIHYWYLRCWWVFG*CHLRLIWCYQLSFL Trigger: CAGGAAGGAGAGCTGATAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAGGTACCAATAATGGATTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | GTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTAGCTGTCCAGGGTGCATaGGAGGCTGAGGCCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLLTPSLRKDSKCFSNKVAVQGA*EAEALA Trigger: AGCCAGGGCCTCAGCCTCCAATGCACCCTGGACAGC...TACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | TACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCTGGAAACGCCATGCGTaGTGCACCTGGGGCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YYGDKAGKLVHTQSSCYVWKRHA*CTWGWC Trigger: GCACCAGCCCCAGGTGCACAACGCATGGCGTTTCCA...GACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS GCA 90 bp | AAAATCCATTATTGGTACCTCAGGTGTTGGTGGGTTTTCGGATGGTaGCACCTGCGGCTCATCTGGTGCTATCAGCTCTCCTTCCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KIHYWYLRCWWVFGW*HLRLIWCYQLSFLQ Trigger: TTGCAGGAAGGAGAGCTGATAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAGGTACCAATAATGGATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | TTTAGCAACAAGGTACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGGCCTGGGTTGGCCTCTaGCAGTGGAGAGCCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSNKVLWGQSWKACAYTKAWVGL*QWRAFW Trigger: CCAGAAGGCTCTCCACTGCAAGAGGCCAACCCAGGC...CTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTACCTTGTTGCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | GTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTAGCGGGGTTTTCCCGTTaGCCTGGGTTGGCCTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLTPSLRKDSKCFSNKVAGFSR*PGLASC Trigger: GCAAGAGGCCAACCCAGGCAAACGGGAAAACCCCGC...TACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | GTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTATTGAGCCCCAGGTTGTaGAGGAAATGCCGGCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLLTPSLRKDSKCFSNKVLSPRL*RKCRHG Trigger: GCCGTGCCGGCATTTCCTCAACAACCTGGGGCTCAA...TACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | TTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGCCCTGCAGGACCCCTaGCCATACTGGGGATGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVLLTPSLRKDSKCFSNKALQDP*PYWGCG Trigger: ACCACATCCCCAGTATGGCAAGGGGTCCTGCAGGGC...CTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 90 bp | AAATTGTGGATCAGCAAAATCCATTATTGGTACCTCAGGTGTTGGTaGGTTTTCGGATGGTGCCACCTGCGGCTCATCTGGTGCTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: KLWISKIHYWYLRCW*VFGWCHLRLIWCYQ Trigger: CTGATAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAGGTACCAATAATGGATTTTGCTGATCCACAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 90 bp | TGGAAATTGTGGATCAGCAAAATCCATTATTGGTACCTCAGGTGTTaGTGGGTTTTCGGATGGTGCCACCTGCGGCTCATCTGGTGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: WKLWISKIHYWYLRC*WVFGWCHLRLIWCY Trigger: ATAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAGGTACCAATAATGGATTTTGCTGATCCACAATTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | TTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGTTGAGCCCCAGGTTGTaGAGGAAATGCCGGCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVLLTPSLRKDSKCFSNKLSPRL*RKCRHG Trigger: GCCGTGCCGGCATTTCCTCAACAACCTGGGGCTCAA...CTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | AATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTGCTGTCCAGGGTGCATaGGAGGCTGAGGCCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NICLVLLTPSLRKDSKCFAVQGA*EAEALA Trigger: AGCCAGGGCCTCAGCCTCCAATGCACCCTGGACAGC...AAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | CACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGGGACTTGGTACCTCAGGTGTaGGTGGGTTTTCGGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HLHCGRIVSVLATRYYGDLVPQV*VGFRMV Trigger: CACCATCCGAAAACCCACCAACACCTGAGGTACCAA...GTCCCCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS TCA 90 bp | AGTTCCATAGGCCATGGGACTTCCTCTTTCTCCAGGCATTTCTTCTaGACTCATGAAGCCAATTCTGGCAGGAGCATTCAATTGGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSIGHGTSSFSRHFF*THEANSGRSIQLVC Trigger: GCAAACCAATTGAATGCTCCTGCCAGAATTGGCTTCATGAGTTCAGAAGAAATGCCTGGAGAAAGAGGAAGTCCCATGGCCTATGGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS TCA 90 bp | AGATACTGGGGAATCTACTTCCACAGTAAAGTCTCCTCCCTTGGGTaGATTCTGATTCAGTCTCCTAAGGGTTTGCCTGAAGCCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RYWGIYFHSKVSSLG*ILIQSPKGLPEASK Trigger: TTTGGAGGCTTCAGGCAAACCCTTAGGAGACTGAATCAGAATTCACCCAAGGGAGGAGACTTTACTGTGGAAGTAGATTCCCCAGTATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 90 bp | GCTTTGTTGTGTGCCATTGGTCCCCGAGATATTGAACGGGCGATCTaGAACACGGTTGGAAATTGTGGATCAGCAAAATCCATTATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ALLCAIGPRDIERAI*NTVGNCGSAKSIIG Trigger: ACCAATAATGGATTTTGCTGATCCACAATTTCCAACCGTGTTCCAGATCGCCCGTTCAATATCTCGGGGACCAATGGCACACAACAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | TTTGATAAGAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTGCCTTGAGCCCCAGGTaGTTGAGGAAATGCCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FDKNGSKKGPTLFLATCIALSPR*LRKCRH Trigger: GTGCCGGCATTTCCTCAACAACCTGGGGCTCAAGGC...AATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTCTTATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | GTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTATTGGTACCTCAGGTGTaGGTGGGTTTTCGGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLLTPSLRKDSKCFSNKVLVPQV*VGFRMV Trigger: CACCATCCGAAAACCCACCAACACCTGAGGTACCAA...TACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | GGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCAAGGTTCTTTGTTGTGTGCCATaGGTCCCCGAGATATTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GDKAGKLVHTQSSCYVKVLCCVP*VPEILN Trigger: GTTCAATATCTCGGGGACCAATGGCACACAACAAAG...AACCTTGACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | GAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTTATTAATAGCCTGGGTTGGCCTCTaGCAGTGGAGAGCCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EWKQEGTYTISSHLYLLIAWVGL*QWRAFW Trigger: CCAGAAGGCTCTCCACTGCAAGAGGCCAACCCAGGC...TATTAATAAATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS GCA 90 bp | TGCTGGGTTTCATGTTCCCTTGGTCCTATCCATGGGAAAGAGTTATaGGGTGGGAGAAGTCCGTGCAACCATAAACTATTAAGTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CWVSCSLGPIHGKEL*GGRSPCNHKLLSAF Trigger: AAAAGCACTTAATAGTTTATGGTTGCACGGACTTCTCCCACCGCATAACTCTTTCCCATGGATAGGACCAAGGGAACATGAAACCCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | TTTAGCAACAAGGTACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGGGGTTTCATGTTCCCTaGGTCCTATCCATGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FSNKVLWGQSWKACAYTKGFHVP*VLSMGK Trigger: CTTTCCCATGGATAGGACCAAGGGAACATGAAACCC...CTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTACCTTGTTGCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | TTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTAGCAACAAGGTACTATGGCTGGGGATGTGGTCATaGGGGAAAGCAAGAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LTPSLRKDSKCFSNKVLWLGMWS*GKARSP Trigger: AGGACTTCTTGCTTTCCCCAATGACCACATCCCCAG...CCATAGTACCTTGTTGCTAAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS GCA 90 bp | CTTGGTCCTATCCATGGGAAAGAGTTATGCGGTGGGAGAAGTCCGTaGAACCATAAACTATTAAGTGCTTTTCCAAAGCCAAGTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGPIHGKELCGGRSP*NHKLLSAFPKPSLE Trigger: TTCTAGACTTGGCTTTGGAAAAGCACTTAATAGTTTATGGTTGCACGGACTTCTCCCACCGCATAACTCTTTCCCATGGATAGGACCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | TACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCTATGTCGAACACGGTTGGAAATaGTGGATCAGCAAAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YYGDKAGKLVHTQSSCYVEHGWK*WISKIH Trigger: ATGGATTTTGCTGATCCACAATTTCCAACCGTGTTC...GACATAGCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | CAAGTGCTGACACTTAGACTTGCTCTGATATCATTGATAGTATTTCTAAGTCACCTGGGGATGTGGTCATaGGGGAAAGCAAGAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVLTLRLALISLIVFLSHLGMWS*GKARSP Trigger: AGGACTTCTTGCTTTCCCCAATGACCACATCCCCAG...GTGACTTAGAAATACTATCAATGATATCAGAGCAAGTCTAAGTGTCAGCACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
||
| CDS-3UTR CAA 90 bp | ACAAGGTACTATGGGGACAAAGCTGGAAAGCTTGTGCATACACAAAGTAGCTGCATCAGGCCCTTCATTTaGAAAAGTGGAATCTTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TRYYGDKAGKLVHTQSSCIRPFI*KSGILD Trigger: ATCTAAGATTCCACTTTTCAAAATGAAGGGCCTGAT...GCAGCTACTTTGTGTATGCACAAGCTTTCCAGCTTTGTCCCCATAGTACCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | CTATACCACCAAGTGCTGACACTTAGACTTGCTCTGATATCATTGATAGTATTTGGGTTTCATGTTCCCTaGGTCCTATCCATGGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LYHQVLTLRLALISLIVFGFHVP*VLSMGK Trigger: CTTTCCCATGGATAGGACCAAGGGAACATGAAACCC...AAATACTATCAATGATATCAGAGCAAGTCTAAGTGTCAGCACTTGGTGGTATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
||
| CDS-3UTR CAA 90 bp | ACTAAGTGCTTTTGTGTAGAGAAAGAAGCAGTGTCACATTTCCTGGGCATAATACTTTGTTGTGTGCCATaGGTCCCCGAGATATTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TKCFCVEKEAVSHFLGIILCCVP*VPEILN Trigger: GTTCAATATCTCGGGGACCAATGGCACACAACAAAG...TATTATGCCCAGGAAATGTGACACTGCTTCTTTCTCTACACAAAAGCACTTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
||
| CDS-3UTR CAA 90 bp | AATATATGCTTAGTGCTCTTAACACCTTCACTGCGGAAGGATAGTAAGTGTTTTGAACACGGTTGGAAATaGTGGATCAGCAAAATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NICLVLLTPSLRKDSKCFEHGWK*WISKIH Trigger: ATGGATTTTGCTGATCCACAATTTCCAACCGTGTTC...AAAACACTTACTATCCTTCCGCAGTGAAGGTGTTAAGAGCACTAAGCATATATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS-3UTR CAA 90 bp | GAATGGAAGCAAGAAGGGACCTACACTATTTCTAGCCACTTGTATTTATTAATAATCAGGCCCTTCATTTaGAAAAGTGGAATCTTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EWKQEGTYTISSHLYLLIIRPFI*KSGILD Trigger: ATCTAAGATTCCACTTTTCAAAATGAAGGGCCTGAT...TATTAATAAATACAAGTGGCTAGAAATAGTGTAGGTCCCTTCTTGCTTCCATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS GCA 72 bp | TGGGTTTTCGGATGGTGCCACCTGCGGCTCATCTGGTaGTATCAGCTCTCCTTCCTGCAAGGGCAGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WVFGWCHLRLIW*YQLSFLQGQLS Trigger: GGACAGCTGCCCTTGCAGGAAGGAGAGCTGATAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 72 bp | TGGTGGGTTTTCGGATGGTGCCACCTGCGGCTCATCTaGTGCTATCAGCTCTCCTTCCTGCAAGGGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WWVFGWCHLRLI*CYQLSFLQGQL Trigger: CAGCTGCCCTTGCAGGAAGGAGAGCTGATAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CAA 72 bp | AGCCATGCCAGGAGGTGCCATGCCTTGAGCCCCAGGTaGTTGAGGAAATGCCGGCACGGCGAGGCTCATTTT | + |
|
Preference number: 6 (lower is better) Translates to: SHARRCHALSPR*LRKCRHGEAHF Trigger: AAAATGAGCCTCGCCGTGCCGGCATTTCCTCAACAACCTGGGGCTCAAGGCATGGCACCTCCTGGCATGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CAA 72 bp | AAGGCTCAAACTAGCCATGCCAGGAGGTGCCATGCCTaGAGCCCCAGGTTGTTGAGGAAATGCCGGCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: KAQTSHARRCHA*SPRLLRKCRHG Trigger: GCCGTGCCGGCATTTCCTCAACAACCTGGGGCTCAAGGCATGGCACCTCCTGGCATGGCTAGTTTGAGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CAA 90 bp | CATTGTCTCAAGGCTCAAACTAGCCATGCCAGGAGGTGCCATGCCTaGAGCCCCAGGTTGTTGAGGAAATGCCGGCACGGCGAGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: HCLKAQTSHARRCHA*SPRLLRKCRHGEAH Trigger: ATGAGCCTCGCCGTGCCGGCATTTCCTCAACAACCTGGGGCTCAAGGCATGGCACCTCCTGGCATGGCTAGTTTGAGCCTTGAGACAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS GCA 72 bp | ACCTCAGGTGTTGGTGGGTTTTCGGATGGTGCCACCTaGGGCTCATCTGGTGCTATCAGCTCTCCTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSGVGGFSDGAT*GSSGAISSPSC Trigger: GCAGGAAGGAGAGCTGATAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 72 bp | GTGAAAGGAGAGCGGGGTTTTCCCGTTTGCCTGGGTTaGCCTCTTGCAGTGGAGAGCCTTCTGGACCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VKGERGFPVCLG*PLAVESLLDLL Trigger: GAGAAGGTCCAGAAGGCTCTCCACTGCAAGAGGCCAACCCAGGCAAACGGGAAAACCCCGCTCTCCTTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS GCA 72 bp | GTGCCATTTGTGAAAGGAGAGCGGGGTTTTCCCGTTTaGCTGGGTTGGCCTCTTGCAGTGGAGAGCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VPFVKGERGFPV*LGWPLAVESLL Trigger: CAGAAGGCTCTCCACTGCAAGAGGCCAACCCAGGCAAACGGGAAAACCCCGCTCTCCTTTCACAAATGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CAA 72 bp | GGTGCCATTTGTGAAAGGAGAGCGGGGTTTTCCCGTTaGCCTGGGTTGGCCTCTTGCAGTGGAGAGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GAICERRAGFSR*PGLASCSGEPS Trigger: AGAAGGCTCTCCACTGCAAGAGGCCAACCCAGGCAAACGGGAAAACCCCGCTCTCCTTTCACAAATGGCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 72 bp | CAAGGAGTCTTTGCCCTGCAGGACCCCTTGCCATACTaGGGATGTGGTCATTGGGGAAAGCAAGAAGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QGVFALQDPLPY*GCGHWGKQEVL Trigger: CAGGACTTCTTGCTTTCCCCAATGACCACATCCCCAGTATGGCAAGGGGTCCTGCAGGGCAAAGACTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 72 bp | CATTATTGGTACCTCAGGTGTTGGTGGGTTTTCGGATaGTGCCACCTGCGGCTCATCTGGTGCTATCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: HYWYLRCWWVFG*CHLRLIWCYQL Trigger: GAGCTGATAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAGGTACCAATAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 72 bp | TGGCTGCTGGGTTTCATGTTCCCTTGGTCCTATCCATaGGAAAGAGTTATGCGGTGGGAGAAGTCCGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: WLLGFMFPWSYP*ERVMRWEKSVQ Trigger: TTGCACGGACTTCTCCCACCGCATAACTCTTTCCCATGGATAGGACCAAGGGAACATGAAACCCAGCAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031226.9 |
||
| CDS CCA 72 bp | TTTGCCTGGGTTGGCCTCTTGCAGTGGAGAGCCTTCTaGACCTTCTCCTTTTTCAGGGCCTTTGGTAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: FAWVGLLQWRAF*TFSFFRAFGNR Trigger: TCTGTTACCAAAGGCCCTGAAAAAGGAGAAGGTCCAGAAGGCTCTCCACTGCAAGAGGCCAACCCAGGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 72 bp | ATCAGCAAAATCCATTATTGGTACCTCAGGTGTTGGTaGGTTTTCGGATGGTGCCACCTGCGGCTCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ISKIHYWYLRCW*VFGWCHLRLIW Trigger: CCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAGGTACCAATAATGGATTTTGCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CCA 72 bp | TGGATCAGCAAAATCCATTATTGGTACCTCAGGTGTTaGTGGGTTTTCGGATGGTGCCACCTGCGGCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: WISKIHYWYLRC*WVFGWCHLRLI Trigger: GATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAGGTACCAATAATGGATTTTGCTGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
||
| CDS CAA 72 bp | GTGGATCAGCAAAATCCATTATTGGTACCTCAGGTGTaGGTGGGTTTTCGGATGGTGCCACCTGCGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VDQQNPLLVPQV*VGFRMVPPAAH Trigger: ATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAGGTACCAATAATGGATTTTGCTGATCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS CAA 72 bp | CGGATGCTTTGTTGTGTGCCATTGGTCCCCGAGATATaGAACGGGCGATCTGGAACACGGTTGGAAATTGTG | + |
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Preference number: 6 (lower is better) Translates to: RMLCCVPLVPEI*NGRSGTRLEIV Trigger: CACAATTTCCAACCGTGTTCCAGATCGCCCGTTCAATATCTCGGGGACCAATGGCACACAACAAAGCATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS CCA 72 bp | TGTGCCATTGGTCCCCGAGATATTGAACGGGCGATCTaGAACACGGTTGGAAATTGTGGATCAGCAAAATCC | + |
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Preference number: 6 (lower is better) Translates to: CAIGPRDIERAI*NTVGNCGSAKS Trigger: GGATTTTGCTGATCCACAATTTCCAACCGTGTTCCAGATCGCCCGTTCAATATCTCGGGGACCAATGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS CCA 72 bp | ATACTGCTGGGTTTCATGTTCCCTTGGTCCTATCCATaGGAAAGAGTTATGCGGTGGGAGAAGTCCGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: ILLGFMFPWSYP*ERVMRWEKSVQ Trigger: TTGCACGGACTTCTCCCACCGCATAACTCTTTCCCATGGATAGGACCAAGGGAACATGAAACCCAGCAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198265.5 |
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| CDS CAA 90 bp | TTGGAAATTGTGGATCAGCAAAATCCATTATTGGTACCTCAGGTGTaGGTGGGTTTTCGGATGGTGCCACCTGCGGCTCATCTGGTGCTA | + |
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Preference number: 6 (lower is better) Translates to: LEIVDQQNPLLVPQV*VGFRMVPPAAHLVL Trigger: TAGCACCAGATGAGCCGCAGGTGGCACCATCCGAAAACCCACCAACACCTGAGGTACCAATAATGGATTTTGCTGATCCACAATTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS CAA 90 bp | GTGCCATTGGTCCCCGAGATATTGAACGGGCGATCTGGAACACGGTaGGAAATTGTGGATCAGCAAAATCCATTATTGGTACCTCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: VPLVPEILNGRSGTR*EIVDQQNPLLVPQV Trigger: CACCTGAGGTACCAATAATGGATTTTGCTGATCCACAATTTCCAACCGTGTTCCAGATCGCCCGTTCAATATCTCGGGGACCAATGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS TCA 72 bp | GGCCATGGGACTTCCTCTTTCTCCAGGCATTTCTTCTaGACTCATGAAGCCAATTCTGGCAGGAGCATTCAA | + |
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Preference number: 6 (lower is better) Translates to: GHGTSSFSRHFF*THEANSGRSIQ Trigger: TTGAATGCTCCTGCCAGAATTGGCTTCATGAGTTCAGAAGAAATGCCTGGAGAAAGAGGAAGTCCCATGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS CCA 72 bp | GGTGGGGGATGCACAGGCAAAGAATATTCATACTGCTaGGTTTCATGTTCCCTTGGTCCTATCCATGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: GGGCTGKEYSYC*VSCSLGPIHGK Trigger: TTTCCCATGGATAGGACCAAGGGAACATGAAACCCAGCAGTATGAATATTCTTTGCCTGTGCATCCCCCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198265.5 |
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| CDS CAA 72 bp | GGAGAGCCTTCTGGACCTTCTCCTTTTTCAGGGCCTTaGGTAACAGATACTGGGGAATCTACTTCCACAGTA | + |
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Preference number: 6 (lower is better) Translates to: GEPSGPSPFSGP*VTDTGESTSTV Trigger: TACTGTGGAAGTAGATTCCCCAGTATCTGTTACCAAAGGCCCTGAAAAAGGAGAAGGTCCAGAAGGCTCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS TCA 72 bp | GGAATCTACTTCCACAGTAAAGTCTCCTCCCTTGGGTaGATTCTGATTCAGTCTCCTAAGGGTTTGCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: GIYFHSKVSSLG*ILIQSPKGLPE Trigger: TTCAGGCAAACCCTTAGGAGACTGAATCAGAATTCACCCAAGGGAGGAGACTTTACTGTGGAAGTAGATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS CCA 72 bp | ACCTTCTCCTTTTTCAGGGCCTTTGGTAACAGATACTaGGGAATCTACTTCCACAGTAAAGTCTCCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: TFSFFRAFGNRY*GIYFHSKVSSL Trigger: AAGGGAGGAGACTTTACTGTGGAAGTAGATTCCCCAGTATCTGTTACCAAAGGCCCTGAAAAAGGAGAAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS CAA 72 bp | GTCCCCGAGATATTGAACGGGCGATCTGGAACACGGTaGGAAATTGTGGATCAGCAAAATCCATTATTGGTA | + |
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Preference number: 6 (lower is better) Translates to: VPEILNGRSGTR*EIVDQQNPLLV Trigger: TACCAATAATGGATTTTGCTGATCCACAATTTCCAACCGTGTTCCAGATCGCCCGTTCAATATCTCGGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS GCA 72 bp | ATCCATGGGAAAGAGTTATGCGGTGGGAGAAGTCCGTaGAACCATAAACTATTAAGTGCTTTTCCAAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: IHGKELCGGRSP*NHKLLSAFPKP Trigger: TGGCTTTGGAAAAGCACTTAATAGTTTATGGTTGCACGGACTTCTCCCACCGCATAACTCTTTCCCATGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS CCA 72 bp | CAATTGGTTTGCTCCATAAGACATGTAAAACATTCCTaGGTAAAAAGCGGATGCTTTGTTGTGTGCCATTGG | + |
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Preference number: 6 (lower is better) Translates to: QLVCSIRHVKHS*VKSGCFVVCHW Trigger: CCAATGGCACACAACAAAGCATCCGCTTTTTACCCAGGAATGTTTTACATGTCTTATGGAGCAAACCAATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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| CDS GCA 72 bp | CATGAAGCCAATTCTGGCAGGAGCATTCAATTGGTTTaGTCCATAAGACATGTAAAACATTCCTGGGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: HEANSGRSIQLV*SIRHVKHSWVK Trigger: TTTTACCCAGGAATGTTTTACATGTCTTATGGAGCAAACCAATTGAATGCTCCTGCCAGAATTGGCTTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031226.9 ENSMUST00000198265.5 |
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